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2024-04-28 14:45:48

Gene list

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COG category: Replication, recombination and repair
Organism: Bacillus halodurans C-125, C-125

Number of genes found: 260

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Bacillus halodurans C-125, C-125
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
BH0039 transposase (11)chromosome CDS56938 1257 + 0.479714
BH0048 chromosome CDS64714 285 + 0.449123
BH0054 chromosome CDS71741 711 + 0.465541
BH0056 chromosome CDS74135 558 + 0.482079
BH0080 serine/threonine-protein kinasechromosome CDS98730 984 + 0.458333
BH0089 transposase (01)chromosome CDS108136 1218 + 0.479475
BH0099 transposase (11)chromosome CDS130700 1257 + 0.479714
BH0123 transposase (01)chromosome CDS153213 1218 + 0.47619
BH0176 transposase (09)chromosome CDS194272 471 + 0.373673
BH0224 transposase (11)chromosome CDS242716 1257 + 0.481305
BH0245 transposase (01)chromosome CDS267850 1326 + 0.469834
BH0269 transposase (09)chromosome CDS291039 471 + 0.373673
BH0270 transposase (01)chromosome CDS291658 1326 + 0.471342
BH0275 transposase (07)chromosome CDS296088 1356 - 0.419617
BH0311 transposase (04)chromosome CDS330255 1173 + 0.445865
BH0327 chromosome CDS347483 1377 + 0.386347
BH0330 chromosome CDS351874 912 + 0.422149
BH0331 chromosome CDS352782 378 + 0.436508
BH0332 chromosome CDS353156 747 + 0.392236
BH0334 transposase (05)chromosome CDS356399 285 + 0.449123
BH0335 transposase (06)chromosome CDS356725 786 + 0.40458
BH0339 chromosome CDS363096 852 + 0.420188
BH0340 chromosome CDS364072 525 + 0.43619
BH0341 chromosome CDS364593 1032 + 0.445736
BH0342 chromosome CDS365633 291 + 0.388316
BH0356 transposase (04)chromosome CDS381124 1173 + 0.446718
BH0376 DNA mismatch repair proteinchromosome CDS404623 1716 - 0.479604
BH0379 transposase (01)chromosome CDS408755 1218 + 0.473727
BH0387 transposase (04)chromosome CDS415406 1173 - 0.445865
BH0416 transposase (01)chromosome CDS443760 1218 + 0.475369
BH0434 transposase (03)chromosome CDS461345 1284 + 0.409657
BH0436 transposase (14)chromosome CDS463511 417 - 0.378897
BH0457 chromosome CDS486190 375 - 0.498667
BH0533 transposase (11)chromosome CDS565572 1257 + 0.479714
BH0611 transposase (11)chromosome CDS663032 1257 + 0.479714
BH0668 transposase (01)chromosome CDS721433 1218 - 0.477012
BH0682 cassette chromosome recombinase B1chromosome CDS737094 1569 + 0.406628
BH0688 transposase (05)chromosome CDS744034 285 + 0.449123
BH0689 transposase (06)chromosome CDS744360 786 + 0.40458
BH0690 transposase (04)chromosome CDS745393 879 + 0.461889
BH0691 transposase (15)chromosome CDS746734 1116 - 0.398746
BH0714 excinuclease ABC (subunit A)chromosome CDS774623 2463 - 0.468128
BH0765 chromosome CDS829005 948 + 0.470464
BH0767 transposase (01)chromosome CDS830902 1227 - 0.477588
BH0769 transposase (16)chromosome CDS834193 936 + 0.403846
BH0812 chromosome CDS883695 513 + 0.452242
BH0829 chromosome CDS901377 402 - 0.477612
BH0881 chromosome CDS955377 147 + 0.346939
BH0915 transposase (04)chromosome CDS988390 1173 + 0.445865
BH0931 adenine glycosylasechromosome CDS999676 1119 + 0.442359
BH0954 transposase (02)chromosome CDS1025611 1215 - 0.384362
BH0969 SNF2 helicasechromosome CDS1041342 1734 - 0.361592
BH0981 transposase (07)chromosome CDS1057800 1356 - 0.419617
BH0986 chromosome CDS1062055 627 + 0.449761
BH0993 transposase (03)chromosome CDS1069479 1284 + 0.409657
BH1049 transposase (01)chromosome CDS1126442 1218 + 0.475369
BH1054 transposase (08)/ABC transporter (ATP-binding protein)chromosome CDS1131053 2706 + 0.462676
BH1170 transposase (01)chromosome CDS1267263 1326 + 0.472097
BH1183 transposase (02)chromosome CDS1277828 1215 - 0.384362
BH1207 transposase (03)chromosome CDS1300141 1284 - 0.409657
BH1240 single-strand DNA-specific exonucleasechromosome CDS1331355 2355 + 0.461996
BH1257 chromosome CDS1352600 1287 - 0.456876
BH1263 chromosome CDS1358233 1176 + 0.457483
BH1269 chromosome CDS1366101 423 + 0.468085
BH1281 chromosome CDS1374627 624 - 0.439103
BH1301 transposase (03)chromosome CDS1391974 1284 + 0.409657
BH1307 transposase (01)chromosome CDS1397729 1326 + 0.468326
BH1309 non-specific DNA-binding protein II (HB) (HU)chromosome CDS1400243 273 - 0.424908
BH1337 chromosome CDS1421231 1029 + 0.43829
BH1338 transposase (02)chromosome CDS1422414 1215 - 0.384362
BH1347 transposase (01)chromosome CDS1433166 1218 + 0.473727
BH1369 chromosome CDS1452947 765 + 0.406536
BH1381 transposase related protein (17)chromosome CDS1465678 450 + 0.477778
BH1385 ATP-dependent RNA helicasechromosome CDS1468884 1317 + 0.464692
BH1386 endonuclease IVchromosome CDS1470231 897 + 0.404682
BH1412 transposase (01)chromosome CDS1497609 1218 + 0.473727
BH1427 transposase (08)chromosome CDS1514589 1725 - 0.477101
BH1472 chromosome CDS1551418 1242 + 0.44686
BH1473 transposase (02)chromosome CDS1552896 1143 + 0.386702
BH1524 chromosome CDS1602569 552 + 0.445652
BH1529 integrase/recombinasechromosome CDS1606262 900 + 0.453333
BH1546 transposase (01)chromosome CDS1622118 1218 + 0.475369
BH1548 transposase (03)chromosome CDS1625711 1284 + 0.409657
BH1607 ATP-dependent DNA helicasechromosome CDS1683318 1476 + 0.46477
BH1642 transposase (09)chromosome CDS1718573 471 + 0.373673
BH1686 transposase (02)chromosome CDS1758111 1215 + 0.384362
BH1701 transposase (02)chromosome CDS1776570 1215 - 0.384362
BH1749 DNA-3-methyladenine glycosidasechromosome CDS1824363 666 + 0.465465
BH1770 chromosome CDS1842852 408 + 0.411765
BH1771 chromosome CDS1843948 1158 + 0.463731
BH1792 ATP-dependent helicasechromosome CDS1863689 1932 + 0.456004
BH1893 chromosome CDS1978221 519 + 0.441233
BH1895 transposase (09)chromosome CDS1981147 471 + 0.373673
BH1901 chromosome CDS1988413 714 + 0.466387
BH1904 chromosome CDS1990807 183 + 0.387978
BH1929 transposase (01)chromosome CDS2019825 1218 + 0.47619
BH1946 transposase (01)chromosome CDS2042307 1218 + 0.474548
BH1963 transposase (02)chromosome CDS2058027 1215 - 0.384362
BH1969 chromosome CDS2063501 360 - 0.380556
BH1990 spore germination proteinchromosome CDS2087250 537 - 0.417132
BH2040 chromosome CDS2151769 2457 + 0.391941
BH2047 chromosome CDS2166866 2472 + 0.375405
BH2070 transposase (08)chromosome CDS2190474 1857 - 0.472267
BH2093 transposase (04)chromosome CDS2215885 1173 - 0.445865
BH2139 DNA topoisomerase IV subunit Achromosome CDS2266020 2451 - 0.44798
BH2140 DNA topoisomerase IV subunit Bchromosome CDS2268473 1968 - 0.47002
BH2152 chromosome CDS2279478 498 - 0.495984
BH2154 transposase related protein (19)chromosome CDS2281074 270 - 0.448148
BH2180 5'-3' exonucleasechromosome CDS2304656 912 + 0.449561
BH2204 transposase (02)chromosome CDS2324674 1215 - 0.384362
BH2209 chromosome CDS2332098 1836 + 0.447712
BH2218 chromosome CDS2341593 813 - 0.466175
BH2282 chromosome CDS2405777 411 + 0.445255
BH2326 chromosome CDS2450356 366 - 0.442623
BH2342 transposase (05)chromosome CDS2462795 285 + 0.449123
BH2343 transposase (06)chromosome CDS2463121 786 + 0.40458
BH2346 chromosome CDS2465077 405 - 0.427161
BH2348 chromosome CDS2466235 390 - 0.333333
BH2349 chromosome CDS2467042 672 - 0.348214
BH2354 resolvasechromosome CDS2471516 654 - 0.434251
BH2364 chromosome CDS2480884 1137 + 0.465259
BH2377 transposase (02)chromosome CDS2496604 1215 - 0.384362
BH2379 chromosome CDS2499681 666 - 0.457958
BH2381 chromosome CDS2500622 1413 - 0.456476
BH2382 chromosome CDS2502021 999 - 0.435435
BH2384 ATP-dependent RNA helicasechromosome CDS2504383 1620 - 0.44321
BH2430 chromosome CDS2553430 1383 - 0.444685
BH2472 transposase (02)chromosome CDS2590982 1215 - 0.384362
BH2477 transposase (02)chromosome CDS2596912 1215 - 0.384362
BH2520 transposase related protein (20)chromosome CDS2641541 567 - 0.382716
BH2521 transposase (21)chromosome CDS2642064 522 - 0.400383
BH2524 transposase (10)chromosome CDS2645647 945 + 0.424339
BH2590 chromosome CDS2713332 570 - 0.447368
BH2597 chromosome CDS2717877 969 - 0.437564
BH2641 transposase (02)chromosome CDS2761350 1215 + 0.384362
BH2651 transposase (02)chromosome CDS2771928 1215 - 0.384362
BH2696 transposase (07)chromosome CDS2815559 1356 + 0.419617
BH2734 chromosome CDS2857954 1725 + 0.414493
BH2741 ATP/GTP-binding protein (ImpB/MucB/SamB family)chromosome CDS2865634 1230 + 0.509756
BH2774 transposase (01)chromosome CDS2899777 1380 - 0.468116
BH2782 exodeoxyribonuclease VII (small subunit)chromosome CDS2909915 243 - 0.444444
BH2783 exodeoxyribonuclease VII (large subunit)chromosome CDS2910144 1377 - 0.451707
BH2817 helicase (Snf2/Rad54 family)chromosome CDS2941747 1701 + 0.425044
BH2834 ATP-dependent DNA helicasechromosome CDS2952811 2343 + 0.437047
BH2841 transposase (08)chromosome CDS2960575 1722 - 0.480256
BH2842 transposase (09)chromosome CDS2962650 471 - 0.373673
BH2886 chromosome CDS3002425 330 - 0.4
BH2913 SNF2 helicasechromosome CDS3027987 2988 + 0.45415
BH2922 transposase (02)chromosome CDS3035900 1215 - 0.384362
BH2965 transposase (04)chromosome CDS3085471 1173 + 0.445865
BH2967 transposase (01)chromosome CDS3087677 1326 + 0.471342
BH2978 transposase (02)chromosome CDS3098672 1215 + 0.384362
BH2980 ATP-dependent nuclease subunit Achromosome CDS3100601 3390 - 0.460177
BH3003 chromosome CDS3122694 177 - 0.355932
BH3032 DNA repair proteinchromosome CDS3145229 699 - 0.449213
BH3082 chromosome CDS3199418 636 - 0.353774
BH3087 chromosome CDS3202135 258 + 0.364341
BH3106 DNA mismatch repair proteinchromosome CDS3222070 2358 - 0.480068
BH3137 transposase (01)chromosome CDS3251637 1218 - 0.479475
BH3189 chromosome CDS3305785 222 - 0.45045
BH3193 chromosome CDS3310011 993 - 0.436052
BH3233 transposase (09)chromosome CDS3352876 471 - 0.373673
BH3247 transposase (02)chromosome CDS3367701 1215 + 0.384362
BH3308 chromosome CDS3432895 474 - 0.451477
BH3348 RNA helicasechromosome CDS3464647 1170 - 0.453846
BH3409 transposase (02)chromosome CDS3522449 1215 - 0.384362
BH3417 transposase (06)chromosome CDS3529870 786 - 0.40458
BH3418 transposase (05)chromosome CDS3530697 285 - 0.449123
BH3437 chromosome CDS3548692 171 + 0.48538
BH3444 transposase (06)chromosome CDS3556108 786 - 0.40458
BH3445 transposase (05)chromosome CDS3556935 285 - 0.449123
BH3458 transposase (04)chromosome CDS3570055 1173 - 0.445865
BH3461 transposase (03)chromosome CDS3573158 1284 + 0.409657
BH3465 chromosome CDS3575948 366 + 0.322404
BH3466 transposase (09)chromosome CDS3576621 471 - 0.373673
BH3478 transposase (09)chromosome CDS3587310 471 - 0.373673
BH3499 transposase (01)chromosome CDS3606856 1218 - 0.475369
BH3503 transposase (10)chromosome CDS3611405 945 - 0.424339
BH3507 transposase (02)chromosome CDS3616309 1215 - 0.384362
BH3508 cytosine-specific methyltransferasechromosome CDS3617919 981 + 0.383282
BH3535 chromosome CDS3641643 1350 - 0.453333
BH3541 phage-related proteinchromosome CDS3645343 804 - 0.396766
BH3542 chromosome CDS3646022 891 - 0.435466
BH3543 phage-related proteinchromosome CDS3646970 879 - 0.445961
BH3544 phage-related proteinchromosome CDS3647848 963 - 0.45379
BH3551 integrase (phage-related protein)chromosome CDS3650986 1137 + 0.425682
BH3565 transposase (02)chromosome CDS3666876 1215 - 0.384362
BH3570 mutator MutT proteinchromosome CDS3671442 480 - 0.43125
BH3585 transposase (01)chromosome CDS3687451 567 - 0.492063
BH3609 chromosome CDS3713783 279 + 0.437276
BH3635 transposase (07)chromosome CDS3735665 1356 - 0.419617
BH3664 transposase (04)chromosome CDS3776115 1173 - 0.445865
BH3704 transposase (03)chromosome CDS3824532 1284 - 0.409657
BH3726 chromosome CDS3849562 459 - 0.474946
BH3741 chromosome CDS3862165 660 - 0.436364
BH3752 transposase (01)chromosome CDS3873221 1392 - 0.471983
BH3832 chromosome CDS3955222 798 - 0.4599
BH3950 transposase (10)chromosome CDS4089152 945 + 0.424339
BH3964 chromosome CDS4104657 198 + 0.388889
BH3965 transposase (22)chromosome CDS4105170 1545 + 0.420065
BH3966 transposase (23)chromosome CDS4106714 765 + 0.407843
BH3985 transposase (13)chromosome CDS4123449 1365 - 0.397802
BH3998 transposase (25)chromosome CDS4135575 1500 + 0.422
BH3999 transposase (26)chromosome CDS4137074 726 + 0.415978
BH4000 transposase (27)chromosome CDS4137817 786 + 0.410941
BH4001 chromosome CDS4138766 1875 - 0.325867
BH4003 chromosome CDS4141891 795 - 0.299371
BH4004 modification methylasechromosome CDS4142692 1098 - 0.308743
BH4006 transposase (13)chromosome CDS4144959 267 + 0.40824
BH4009 chromosome CDS4146463 354 + 0.477401
BH4017 chromosome CDS4151632 1845 + 0.392954
BH4039 chromosome CDS4177128 549 - 0.444444
BH4041 chromosome CDS4179651 1284 - 0.397975
adaB O6-methylguanine-DNA alkyltransferasechromosome CDS420919 507 - 0.510848
codV integrase/recombinasechromosome CDS2582666 912 - 0.439693
comEA late competence operon required for DNA binding and uptakechromosome CDS1417011 633 + 0.440758
comFA late competence proteinchromosome CDS3726996 1326 - 0.4819
dat O6-methylguanine DNA alkyltransferasechromosome CDS1101249 528 + 0.456439
dinG ATP-dependent DNA helicasechromosome CDS1762640 2829 + 0.443973
dnaA initiation of chromosome replicationchromosome CDS584 1350 + 0.422222
dnaB chromosome replication initiation/membrane attachment proteinchromosome CDS3260393 1458 - 0.442387
dnaC replicative DNA helicasechromosome CDS4165660 1365 - 0.505495
dnaD initiation of chromosome replicationchromosome CDS1770887 702 + 0.421652
dnaE DNA polymerase III alpha subunitchromosome CDS3286939 3351 - 0.46225
dnaG DNA primasechromosome CDS1459464 1800 + 0.441111
dnaI primosome component (helicase loader)chromosome CDS3259457 936 - 0.451923
dnaN DNA polymerase III (beta subunit)chromosome CDS2103 1143 + 0.394576
dnaX DNA polymerase III gamma and tau subunitschromosome CDS46908 1695 + 0.461357
gyrA DNA gyrase subunit Achromosome CDS7065 2502 + 0.452838
gyrB DNA gyrase subunit Bchromosome CDS5130 1914 + 0.46186
hbs non-specific DNA-binding protein II (HB) (HU)chromosome CDS3471792 273 + 0.435897
holB DNA polymerase III delta' subunitchromosome CDS61728 987 + 0.451874
lig DNA ligase (polydeoxyribonucleotide synthase (NAD+))chromosome CDS701864 2010 + 0.471144
mfd transcription-repair coupling factor (TRCF)chromosome CDS85041 3546 + 0.445854
mulT DNA mismatch repair proteinchromosome CDS2484090 1914 - 0.464472
mutM formamidopyrimidine-DNA glycosidasechromosome CDS3266361 825 - 0.482424
mutS DNA mismatch repair protein (mismatch recognition step)chromosome CDS2486023 2598 - 0.463818
nth endonuclease III (DNA repair)chromosome CDS1771619 657 + 0.459665
pcrA ATP-dependent DNA helicasechromosome CDS699605 2244 + 0.463012
polA DNA polymerase Ichromosome CDS3267208 2631 - 0.448499
polC DNA polymerase III (alpha subunit)chromosome CDS2538791 4302 - 0.461181
priA primosomal replication factor Ychromosome CDS2627969 2415 - 0.482816
recA multifunctional protein involved in homologous recombinationchromosome CDS2503142 1050 - 0.468571
recF DNA repair and genetic recombinationchromosome CDS3662 1116 + 0.444444
recG ATP-dependent DNA helicasechromosome CDS2613137 2022 - 0.477745
recN DNA repair and genetic recombinationchromosome CDS2902594 1698 - 0.436985
recR DNA repair and genetic recombinationchromosome CDS48944 597 + 0.462312
rnh ribonuclease Hchromosome CDS2594397 792 - 0.501263
ruvA holliday junction DNA helicasechromosome CDS1317241 612 + 0.428105
ruvB holliday junction DNA helicase (DNA-binding protein)chromosome CDS1318107 762 + 0.476378
smf DNA processing protein (Smf family)chromosome CDS2587277 909 - 0.442244
splB spore photoproduct lyasechromosome CDS2929474 1032 - 0.459302
ssb single-strand DNA-binding protein (phage-related protein)chromosome CDS4186205 507 - 0.499014
topA DNA topoisomerase Ichromosome CDS2585130 2073 - 0.43753
topB DNA topoisomerase IIIchromosome CDS3500403 2166 - 0.463989
tupA teichuronopeptide (related to alkaliphily)chromosome CDS3763498 1470 - 0.404762
ung uracil-DNA glycosylasechromosome CDS3975505 675 - 0.475556
uvrA excinuclease ABC (subunit A)chromosome CDS3694032 2874 - 0.458594
uvrB excinuclease ABC (subunit B)chromosome CDS3696911 1983 - 0.452849
uvrC excinuclease ABC (subunit C)chromosome CDS3211810 1776 - 0.443131