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COG category: Replication, recombination and repair
Organism: Buchnera aphidicola str. APS (Acyrthosiphon pisum), APS
Gene type: CDS

Number of genes found: 42

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# Buchnera aphidicola str. APS (Acyrthosiphon pisum), APS

>gid:449770  deaD  ATP-dependent RNA helicase deaD
MTHIESTFSFLGLNPFIIQSLNEMGYVKPSPIQASCIPLLLEGRDVLGMA
QTGSGKTAAFSLPLLHNLNINLKAPQILVLAPTRELAVQVAEAFSDFSKY
MIGIHVLPLYGGQRYELQLRALRQGPQIVVGTPGRLLDHLKRGTLNLSNL
HGLVLDEADEMLRMGFIEDVETIMAQIPKEHQTALFSATMPEAIRRISKR
FMRNPKEIKIQSNITTRPDIKQSYWMVYGRKTDALIRFLEAEDFSATIIF
VRTKNATLEVSEALERNGYNSAALNGDMNQALREQTLERLKNGRLDILIA
TDVAARGLDVDRISFVINYDIPMDSESYVHRIGRTGRAGRAGRALLFVEN
RERRLLRNIERTMKQSIPEVQLPKVELLCQRRLEQFAKKVQQQLESRDLD
EYSALLDKLYSTDDLDIKTLAAALLKMAQGERPLIIKPDVIKRQSRDLLF
QDDRRREDNRNSRTRRDRRDINKDAELYRIEVGRNDGVEVRHIVGAIANE
GNINSRNIGNIKLFSSYSTIELPKGMSKDLLQTFNRTRILNKPINMKLLR
DSRHYENKTTHRSIFNKDKNSNRRVSDGSFNKSNSPKKTEFKSSFFRRRN
V
>gid:449410  dnaA  chromosomal replication initiator protein dnaA
MSLCLWKQCLDRLQDELPNTEFSMWIRSLKAKLNNNILEIYAPNKFVLEW
VKDKYLNHLKKILQDYCGTNSPLIKFEIYQIYKENKLKKNIENNNNNKNE
KLIWSNIPKFKNLSYRSNINKRYNFQNFVEGKSNQLARSAAFQAARNPGN
SYNPLFLYGATGLGKTHLLHAIGNEILSYKYDIKIIFMNSECFVQDMVKA
LKNNAIEKFKLYYRSVDALLIDDIQFFAHKERSQEEFFHTFNTLIEGNQQ
IILTSDRYPKEINGVEDRLKSRFSWGLTIAIDPPEIETRVAILIKKADQN
NVILSNEVAFFIAKHLRSNVRELEGALNRVILNSRFTHRAITVDFAREAL
QDILAVQEKIITIDNIQKTVAKYYKIKVSDLLSKKRSRSIARPRQMAMAM
AKKLTNHSLPEIGEAFSGRDHTTVLHACCKIEQLRKENHDIKKDFLNLIR
TLSK
>gid:449944  dnaB  replicative DNA helicase
MAKDKLYLNQINRLKIPPHSLEAEQSVLGGLMLDNEQWDSVSEHVVADDF
FSKPHRLIFQEMQKLLDLGYPIDLITLSESLEQKGKLESVGRFSYLAELS
KNTPSTANITAYADIVRERAIVREMILVANKIANAGYDTQGRKSEELLDY
AESSVFKIAEKRFKKDSGPKNVEQILDETVASIEKLFLSPHDGVTGINTG
YQDLNKKTSGLQRSELIIIAARPSMGKTTFAMNLCENAAMLYDKPVLIFS
LEMPGEQIMMRMLASLSRVNQARIRTGQLNNEDWARISGTINILLKKKNI
YIDDSSALTPSEVRSRARRIYRENNGLTLIMVDYLQLMRVPSLSENRTLE
IAEISRTLKALAKELQVPVIALSQLNRSLEQRSDKRPVNSDLRESGSLEQ
DADLIMFIYRDEIYNENSDLKGIAEIIIGKQRNGPIGTVRLTFNGHWSRF
DNYSGQKYD
>gid:449419  dnaC  DNA replication protein dnaC
MTFYTEFFKRLQRLMPKNIKPKFDNDEDLLAWNQEQGRLSSESIIRENKA
MKMQRVLGRSGIRELYMNCSFDNYKIEHDGQRKVLKASKRYAEEFNENIA
SFIFSGKPGTGKNHLASAIGNYLILHGKSILLVTVADLMSNMKGTFSGTS
NITEENLLHDLSSVDLLMIDEIGMQTESRYEKVIINQIVDRRSSSKRSTG
MLSNLDHKGMKSLLGERVIDRMRLGNSLWLTFEWDSYRQYVKGNEY
>gid:449636  dnaE  DNA polymerase III alpha chain
MNEPKFIHLHVHSDYSMIDGLSKPEDLVKKAASLNMPAIAITDYNNLYGV
IKFYNMAHKLGLKPIIGITVNFFSDLINNQLTKLTLLASTQEGYKNLILL
ISRAYQKGYVHNNHVTIEKKWFSEINKGLILLSGGPQGELGKVLLNGQSS
LISICLSFYQKYFPDSYYLELFRTNRDNEETYLHLAVDLSLSTGVPIVAT
NDVCFLSQEDFKIHKIRIAINEGEILQHSKIQNNYSNQQFLKTTEEMSDL
FSDIPEALINSVEIAKRCNVFIHSGKYFLPQFRTGKISVEKYLIKEAYKG
IKKRLNSRYLDIEKYKDIYSQYINRLDMELTVINKMGFPGYFLIVMEFIQ
WAKDNNIPVGPGRGSGAGSLVAYALNITEVDPLSFNLLFERFLNPERISM
PDFDIDFCMEKRDQVIDHVSEIYGKNAVAQIITFGTLTAKAVIRDVGRVL
GYPYGFINKLSKLVPLDPGITLKEAFSKESELFNLYKNNEDVKNLIDIAK
KLEGTNRNIGKHAGGVVISPTKITDFCPLYCDEKGNNPVTQFDKNDIEYI
GLVKFDFLGLRTLTIISYAVEMINTKLNLNKKRTININSIPLDDAKCFKL
LKNSETTGVFQLESYGMKDLIKRLQPDCFEDMIALVALFRPGPLQSGMVD
NFINRKHGRENISYPDHKWQHILLKPILESTYGIILYQEQVMEIAQVLSG
YTLGSADILRRAMSKKNLKDMSEQRAIFEEGASNNGIDKKLSIKIFDLLE
KFAGYGFNKSHSVAYALVSYQTLWLKSHYPAEFIAAAMTSDIDNTEKIVI
LINESLNMGVKIIPPNINLSKYEFYVNDQGDIVYGLGAIKGIGKNSVQVL
IKEREENKFFHDLFDLCMRIDSQKITRRVLEKLIMSGSCDCFDKNRNYLL
QSIDDAINASKESFRIKSFKQDSLFGIFQNELNQVKKNNLVNLVCPEKNK
LQNEYQVLGFYLTGHPINQYKKELECYVNGVKLSQLKFIKRNKKILVAGI
IVSIKIKITKNKNRIAILVLDDNTSRLEVVIFTELLNAYESLVKLNKLLF
VHGMLNVSFIDKNIKMTAYALIDLSVLRKKYINKLIIILNKEKTNIFFLN
NLYECLDKQSKGNIPVFIFFDNKEVCLNKKLNKKWFVVITDDFLNKLKFL
VGSKNIELKFN
>gid:449454  dnaG  DNA primase
MSGKIPKYFITELLSRTNIIELINTRLELKKYGKNYQTNCPFHHDKTPSF
TVSNEKQFYYCFGCNAHGNAIDFLIQYEHLSFIESIEELALIHGVKIPFE
NTVQNSIYVKKQKLYLLMEKICKLYKKNINVTHLANKYLARRGINQNMID
FFLIGFSSLKWNEFYKKINISKEFEQELLINNIIATDKNGYIYDRFQGRI
IFPIQDNHGRIIGFGGRSLNDMSPKYLNSPETDIFYKRKQIYGLYQVIKK
CSKPVYLLVVEGYIDVITLTQYNIDYAVSILGTSTTTEHIQLLFKNTDII
ICCYDGDDAGKNAAWKTLKKALPYISDKKTLKFILLPNQEDPDTIIRKEG
REKFQKRIDNAITMSKFFFKNILKNINLSSDDDKFHLSVHALPLINTISS
DTIRIYLRQILARMIGILDDNQFEKFLYEKETKNTQKTYFQIKRTPMRTL
IGLLVQNPSLAKLVPVTMKFKNLQIKGLSIFLEILQTCRDNPNIHTGQLL
ELYRNTTIINVLKILARWDHMIIQKETQNMFLDLLMNIHDKILEKRREYL
IAKERKKGLQMNEKKEIWSINKKLSKR
>gid:449409  dnaN  DNA polymerase III beta chain
MKFIINNNILIKNLQKISRLLVKNTSLPILDNVLINIKNGMLSLTGTNLE
IELVAMIQLSTEHISGTATISGRKLLDICRNSLNSSNIEMQLNNNKMHII
SGNSRYILTTLPYDSFPVHHDFHHISEFFIPSDILKKMIEKIQFSMAKQD
VRYYLNGILLEKTDRSLYAVATDGYRLGISKFFLKENIIPFSIVIPRKGV
IELYRLLNIPKQPIKVLVGKNNIRVHIEDLIFTTQLIEGQYPDYKSVLLE
NKNNFITLNSKLLKQSLLRAAILSHEKFCGVEIHIRNGQFKVLSDNQEEE
IAEDRFNINYTGNTVKISINVYYIIEILNSITSENIFLFLNNANNSIQIE
AENDASILYVVMLLKR
>gid:449646  dnaQ  DNA polymerase III epsilon chain
MNRKRTIILDTETTGINQTSLPHINHRIIEIGAVEIIDRCFTGNNFHVYI
QPGRSIESGALKVHGITNKFLLDKPIFKDIADSFLNYIKNSILVIHNASF
DVGFINQELEILNKKIKINTFCSIIDTLKIARELFPGKKNTLDALCTRYK
INKSHRNLHSAIVDSYLLGKLYLLMTGGQDSLFSDNTINYKENFKKLKKN
IQLKNNTLRILHPTLKENDLHEKYLQYMKDKSTCLWN
>gid:449879  dnaX  DNA polymerase III subunits gamma and tau
MNYQILARKWRPQYFRDIIGQKHIVTAISNGLSLGRIHHAWLLSGTRGIG
KTTIARLLAKSLNCQNGITSDPCRQCIICKEIEKGLCLDVIEIDGASRTK
VEEMREILDSIYYSPIKSRFKVYLIDEVHMLSRHSFNALLKTLEEPPEHV
KFVLATTDVDRIPKTIISRCLYFKLQIISEEKIFKFLKYILIKESIDTDE
YSLKKIAYHAHGSIRDALNLLEHAINLGNGHVNIKNVTDMLGLLPEKYSF
LLTDAVLKKDSKKTMLLLNKISSIGVEWEEILIEMLRFLYHISTSQSFPL
VWEKIFTEKYKNQIQKIAQNNKKTNIQLCYQILLNGRKELKFAPSQKIGV
EMSLLRVISAI
>gid:449807  endA  endonuclease I
MKKFCFLKIEKIKNDKKNVYCYNKYVFFFSSNKRSYFKKKTIENFYQAKI
ISIKIHKNAPGSFYCGCQIIWKQKKGIPNLYSCGYKIRKNKNRATRIEWE
HVVPAWQFGHQKTCWKKGGRKKCMEDKKYKHIESDLHNLQPAIGEINGDR
SNFMYGQLNNSVAQYGRCNMKIDFKRKIVEPPERARGAIARTYFYMNKKY
NIILSEKERKMFTIWDKIFPVTKWECEREKLIFNIQGNHNDYVYKHCYKK
>gid:449798  fis  factor-for-inversion stimulation protein
MLEKKTNTEFLVLSTTNTQDKNIKQPLCELVKKSLKYYLSNLNGKDVNNL
YELALSELEQPLLDMIMQYTRGNQTRAALMLGINRSTLRKKLKKYSMN
>gid:449578  gyrA  DNA gyrase subunit A
MKDPSREIIQVNIEEELKSSYLDYSMSVIVGRALPDVRDGLKPVHRRILF
AMYILNNDWNKAYKKSARIVGDVIGKYHPHGDSAVYDAIVRMAQKFSLRY
MLIDGQGNFGSVDGDSAAAMRYTEVRMSKIAHELLNDLEKNTVEFLPNYD
GTEYIPEILPAKIPNLLINGSSGIAVGMATNIPPHNLNEVINGCLAYIDN
NDITLEELIKHIPGPDFPTAAIINGKSGIEEAYRTGKGKIYIRAQNQIEK
NKKNKKESIVFNEIPYQVNKSRLIEKIAELVKEKRIDGITALRDESDKDG
MRIVIEIKREAIAEVILNQLYSLTQLQISFGINMVALCQGQPKTLSLKEI
LKNFLSHRQEIIIRRSLFELNKVRNRIHILEGLNMALININAIIEIIKNS
VNSIDAKKIIIQKNWKSEKINYLAKKHEYYFSEKQAQAILDLRLHKITNL
EQEKIIMEHNDLIKKTKELKEILENPKKMFEVIKSELLSIQNNFSDKRRT
KITENHSDINMEDLINQEDVVVTLSHSGYVKYQPLSDYNAQRRGGKGKSA
AKIKEEDFIESLVIANTHDTILCFSSRGILYWMKVYQLPESSRHARGRPI
VNLLPLSPKERITAILPVHKYQDNLNIFMTTAHGIVKKSSLSQFKKPRFA
GIIAINLHANDELIGVALTDGNNNIMLFTQNGKVVQFLENSVRTMGRTAS
GVKGIKIKKNDKVVSLIVPKNKGSILIATKNGYGKRTKISDFPIKSRATQ
GVISIKITKKNGKIIGAIQVIEKDQIMMITDAGTLVRIRVSEVGVLKRNT
QGVILIRTSKNEKVVALQKIVDPMIEKIDL
>gid:449408  gyrB  DNA gyrase subunit B
MKNIYDSSNIKILRGLDAVRKRPGMYIGDTDDGSGLHHMVFEIVDNSIDE
ALSGYCKEIIVTIHSDNSVSVKDDGRGIPTDIHPEENISAAEVILTVLHS
GGKFDNASYQISGGLHGVGISVVNALSEKLELIIDKNKKKYQQIYRHGKP
ENPLSIIGTTDTTGTYIRFWPSYKTFTNNIKFQYEILSKRLRELSFLNSN
IAIYLEDNRTSIKNCYHYKGGIKAFIKFLNAKKTPIHTHIFYFRSTKDQI
ELEIAMQWNNSHQENILCFTNNIPQKDGGTHLAGFRSGMTRTLNLHIERE
GYNKKNKTTIIGEDVREGLTAIISIKIPDPKFSSQTKDKLVSSEARSVIE
SLINENLIEYLLENPSDSKFIIQKIINAAKVREAARRAREINKKKSILDL
GALPGKLSDCQENDPKFSEIYLVEGDSAGGSAKQGRNRKNQAILPLKGKI
LNVEKSKFDKMILSQEVASLITALGCGIGKNEYNIDKLRYHYIIIMTDAD
VDGAHIRTLLLTFFYRQLPELIEKGYVYIAQPPLYKLKKGRKEKYIKNDE
EMNTYQIKNALKDLVLKSEDNLIINQKLKKFKKIMSEYHYIQIIMKQSKH
YFPKLVFNELIYHNHLHNLKDIEIVKEWIYTLAENLNKKDNSNNHYSIEI
KENLDKNIFEPTIKISRYAHYTKYDFKEEFLKSKEYLLITNLGESFKKYF
SDKVLIEKSGSTYKIDSIKNTWKWLIKQSKRGLFIQRYKGLGEMNPEQLW
NTTMNPETRNMLQVTIKDAVSANNLFNTLMGEAVEPRRQFIENNALKAEN
IDV
>gid:449529  himA  integration host factor alpha-subunit
MVLTKAAISENLFEKLQLTKKESKEFVEFFFEEVRKSLEKGEAVKLSGFG
NFQIKKKKARPGRNPRTGEIFLITARRVVTFKAGQKLKNKINNYLIKKNN
NF
>gid:449706  himD  integration host factor beta-subunit
MIKSELFERIAEQKINISNKMIERAAKEMLEHMIISLANGKRIEIRGFGS
FSLHYRSSRIGRNPKTGKSVKLNEKYVPYFKPGKKLRDRANIHK
>gid:449843  holA  DNA polymerase III delta subunit
MKNIYPNELKKSLMQKLHYFYIFLGEDFFLLEKNQDMILNFAYKKGFLEK
IIIDVEKNQDWKKIILFYKTNNLFFKKTTLVINFLIKKLNVILIQNLNKM
FSLLHPDILIILKFNHLSRFIQKNKSLKEFKNYNIVSCFTPYNLNFINWI
KYEIQEKKINIEEKAFFLLCKYYEGNTLFIYKILDMLFIIWPDTCITEKK
IKKIIIEFFDVSPSYWINSIFQGKTEKSFYILNIFFKKKYNPLILVRSLQ
KDLLQLIHMKREKKISIYVMLEKYNIFVTRRKFFIKAFNKINNDSLLKAI
QILVKIEVNIKKKYNNYVWNQLQELILILCN
>gid:449752  holB  DNA polymerase III delta' subunit
MKLYPWLIKPYNNIVQQYQKKKAHHAILIKTPRGIGVSLLIWFISKWLLC
LKPIGLNSCDKCHGCKLMSANNHPDWHNFTPEKNNLFSIESVRIINEKIF
TCSRQGGSKIIFLSDTGKLTESAINAFLKTLEEPPRKTWFFLVNYKNLNS
HSTLNSRCLIYKLFIPEEKKSLYWLKKETVKKNRSCLTALRINQGSPLYA
KKFINSNLWIDRINFYECLHDSFKKNNLLKILPLITEKDSQVKIDWICFL
LFDSIKFYFNENDNLTNSDQIELIQFFSYNYKNTILDTSIRTWLHCKYRL
SNISGINCELLLSEQLLIWEKILNFS
>gid:449430  hupA  DNA-binding protein hu-alpha
MNKTQLINVISKKSNLSKIQAKLTLETTLSTIIDSLKKGESVQIVGFGTF
KVNLRSSRTGRNPQTGKEIQIPATKVPSFTSGKTLKNAIKQL
>gid:449465  lig  DNA ligase (NAD+)
MTSTKDKIEKLRKILLKYEYFYHTLNQSIISDAEYDYLFRQLYELELKNK
ELIPSDSPTQKVGSHILQKFKKIKHFSPMLSLENTFDVNGYLNFKKRIKK
SIHNNEPLSFCCELKLDGVAISIIYEEGIFVRAATRGDGFEGENITSNAR
MIDSIPLKLKGIDIPKRLEIRGEVFMLKSNFIKLNKKYKLNQNKYFSNPR
NAAAGSLRHIDPNITAERKLIFSCHGCDFFVKTNKELTTHYQRLMKCLSW
GIPVNKEIVICSSDIEIIQFYKKIAQKRNFLDFDIDGIVIKVNSLELQKK
IGSTTKSPRWAIAFKFSPKERITTLNDVKFQVGRTGVITPVAYFNPVYIS
GVMISKASLHNKNEIERLNLHFNDTITICRSGDVIPRLLNVIEIRRCDNA
KKIIFPSFCPVCNTELLENIEEKLIRCHSGLTCDAQKKQALYHFFSKKSL
YVVGLGPKIINELVEKGLVKNPIDFFYLKDIDLIQLKNVGKRKSIKIINS
IKKCKKTTLKCFIYALGIPGVGEVVAGKIANYFIKLDKLMNSNILELNCI
SGVGKIISNNIFNYFSTISNREMVVKLIKQAGIFLNDQEIHKINSEKTYF
FNKKIVLTGVFKSFSRIELKTILLSLGAKISNNISRKTDFLIYGNNFGSK
FFRAKDLDVKIINQEELNSLIRIKE
>gid:449692  mfd  transcription-repair coupling factor
MKITKNKILKNKKIINFKYQKLLDLFYNVNNQKKNNQLLSYLYSFSGKII
FSLTEEKSLKKILRFLMRHKIHPQYIKRIIDIKKEIDYFYMIEEIKNGFI
DKKNNILFLCTKDLLPILIDDKYIGNIKKNTNNINKFNLSQLILNHPVMH
IEHGIGRYKGLTTIETASIQSEYLVISYAEGDKLYVPVSNLHLVSPYTGT
SIENAPLHKLGGDDWNKEKHKISKTVYDHAAQLLHIYAKRESKTGFAFKK
NIEKYDLFCNDCSFKTTSDQNEVMKFVLKDMSKPIPMDRLICGDVGFGKT
EIAMRASFLAVSNKKQVAILVPTTLLAQQHYKNFKIRFSNWPVNINILSR
FQTQKEQDLIFKHTKNGRINIIIGTHKLLFKNIEWCSLGLLIIDEEHRFG
VSHKEIIKKIYSNIDILTLTATPIPRTLNMAMTGIKDLSIIAKPPAQRLA
IKTFIQEYSPILIRKTILREISRGGQVYYIYNKVQNIMNIAERLSILIPE
ASIKIGHGQMKNIDLKKVMNEFYNNKFNVLICTTIIESGVDIARANTIII
ENSDHFGLSQLHQLRGRIGRSNNQAYALLLVNNFNKITSDAKKRLEAISS
VDNFGGGFSLSNQDLEIRGVGEILGKEQSGHIKNIGFSLYMDLLKNAIDL
LKNGKIFSVEKSLKKPLEIDLHVSSLLPSSYILDINTRLFFYKKLANAIH
EKQIEEIKYELIDQFGKLPDFSKNLILIAKIRLIADKIGIKYIKSNNNIG
IIEFNDYGSINTEYLLKMFQKEPKIWKMETSTRIKFILHLKNDYLRLKWI
INLLRNLFKKNI
>gid:449968  mutL  DNA mismatch repair protein mutL
MPIRILPSDLSSQISAGEIIERPASVVKEIIENSIDAGSKNINIIVENSG
FQSIILKDDGCGIDKKDLLLAVCHHATSKINSLSDLDKLTTFGFRGEALA
SIRAVSRLTLISCTRFNDVAAKIYLEGFCSKNIILQPIAHPEGTTIIVDN
LFYNIPVRLKFLKNKKLEFSKICEVVKKIALSHFYINFSLKHNNKLITQY
NSINNRKNKINRLKDIFDTLDTSEFLEIKEKKYRMVLFGWISHPYNFKKI
KNIQYCYVNNRYLYNNIFVNAVRAAYSKIEQKKNISFVLYLTIESFNIDI
NIHPTKNEIKFHNPDVVYTFIYEAVFSYLKKIKEKYYFNFSCKKQTQLNK
EKEFYFYDSDPTFLTLISSIFLKKKQICKNIKNKIKHNNFISKSTPLEKY
ESSIGRLLIIIHKYYGLIYHDNNFLLLSFPVAKGIVRKQKLKNNIQKENI
IEYFLSNIKINLTSQEYLILFNKKEILSKFGFHLIFKKKYVILSSIPAFL
KKCNFHIIISNFFAFLFLKKQVFISDIVDWFYINVFIELKNWTYIRGIEV
LLEIEYYCPLLLINPPSKLLQKININAALCILKI
>gid:449827  mutS  DNA mismatch repair protein mutS
MKKKNIKNSMNNHTPMIKQYLSLKSQYPDMLLFYQMGDFYELFYEDAERI
SELLKITLTKKGYSNHKIIPMAGVPCHKSEYYLSKLVKLGESIAICDQQK
ETDCKKKLISRKVVRIITPGTVTDEVLLEENEDNFIAAIWKENNQFGYSV
LDLSLGFFGVSKIFSSCDLLSEIERTNPKEILYPENFSDVFLIESRKCIR
KRSLLEFDLETSYKLLNLQYNTCSLDGFGIEKNNFVIRAAGCLLQYVKSM
NMTLLPNIRQLKYNYMEDSIFMNFSTRKSLEITQNISGEKKNTLSAILNK
TVTSMGSRMLNRWLNSPLKNFKIVRNRHESVEALQFFYKELQFILRQVND
LERIYSRLALRTASPHDFVRMRSTLEILPNLHLILKKIKSKHIKKIRLSI
GYFEEVLCLLKKAISLKPSKCIRDGGVIAELYNIELDELRSIKINSKEYI
KNFEQKEKKKLMIESFKIKFNKIIGYYIQISKRHTHLIPKYYVIIQTLKN
TERYSVPLLKEYEEKVLNSEMRSLLLEKKLYAEIFNIIEPFLEKLQNSAL
ALSELDVLVNLSERAISLNYTRPIMSEKYGISLLESRHPVVECFLKTPFI
KNSVFLSRTQRMIIITGPNMGGKSTYMRQIALIVIMAGIGSFVPARYALI
GSIDKIFTRIGSADDLSNGYSTFMMEMMEISNILHNATSNSLVLIDELGR
GTSTNEGLSLAWSCSRYLININKSMTLLSTHFVELTKLEEKEKFVKNFHF
SAIKSDLHIAFLYKIKNGISKKSYGISVASLSGLPDSVLEDAEKKLIEIE
NT
>gid:449600  mutT  mutator mutT protein
MELLSKKKVYITRGKYKKNIWEFPGGKVKKHENIVHALKRELLEEVGIIV
LKINFFQYIEYIYPEKKIKLYFFLKKKWKGRPYSIEGYTYLWKRLCHLRA
LDFPLANHSVINALKKNNILIKFR
>gid:449950  mutY  A/G-specific adenine glycosylase
MTKYIFSQLVLNWYHKNGRKDLPWQINKTLYTVWISEIMLQQTTVKSAIP
YFKKFILNFPNIKSLNDSKLDDVLYLWSGLGYYNRAKNIYKSAQIIKKKY
KGIFPDQFSNIIQLPGIGRSTAGAILSLSLNFFYPILDGNVKRILVRYYG
ISGLLKDKKIEKKLWNIIESITPIHNTGKFNQGMMDIGASICISIKPKCT
ICPLKKECIAQIEKKWEKYPLKNIKKTLPQKISWFIIIKHENNFWLKKNT
EQEIWKELFCFPKFKNKEEALIWLKEKKININTCENMISFFHKFSHFILH
INPILIRLPYISEFFKENHKKIWYNLKNPQHIGLPRPVQKILENFKKNIF
>gid:449535  nfo  endonuclease IV
MNYIGAHVSSSGGLEKTVLRAIQIKATAFSFFTKNQRQWFSPPLIQKKID
QFKAMCIKYSFQPQQILPHSSYLINLGHPIDELLRKSRKSFIDEMIRCSQ
LGLIFLNFHPGSHLNKITENACLLRVSDSINIALEKTQNVIAVIENTAGQ
GTNIGYCFEHLSEIIKNIDDKSRVGVCIDTCHLFASGYDLRTKKDCENTF
EKFNSLIGLKYLKGIHLNDSKKKINSRVDRHESLGLGEIGTAAFTWIIKN
ENFSNIPIILETANPMIWEEEIDWLRSQKKL
>gid:449517  nth  endonuclease III
MNKKKRYEILSILSRNNPEPKIELFFSSDFELLLSVILSAQSTDFIVNKT
TKILFKIANTPETIFLLGLERLKNYIKDIGLYNTKALNIIRTSFIILTKY
NSIVPNNRIELESLPGVGRKTANIILNILFKKKTIAVDTHVFRVCNRTNF
AKGKNVKIVEEKLIKVVPSIFKLNFHSWFILHGRYICTARKIKCNICLIF
KLCEFKQKIF
>gid:449698  phrB  deoxyribodipyrimidine photolyase
MQKNLIWFRNDLRVYDNTALHQACQNDTDKVISLFISTPKQWHNQSVSKK
KISFMYYHLISLQKELLKLNIILYYHESTDFLNSIEYLIFFCKKHKVNNL
FYNYEYAINERYRDYLVKKKLSQKGFLVKGFHDNLLFSNRQIRNQKNETY
KVFTFFKKKVIQNLHNNIPQCFPVPSKRKSDRDIFLTSISLKNVNLNFNK
NFFPVGEKEAINRLKNFCIYKFNDYFLKRDYPFLDATSMLSPYLSAGIIS
SRYCLKVLLKTKNSLPLNVLLTSPWFDQILWREFYYHLLIGFPKISRSES
LVTWEKEIHWINNIKHFNAWKEGNTGFPIIDAGMRQLNELGWMHNRLRMI
TSSFLVKNLLINWREGEEHFISNLIDGDLALNNGGWQWSASVGCDSVPYI
RIFNPLHQSKTFDESGNFIKKFIPELKNVPNHHIHQPHEWSKQKNFKIDY
PNPIINYSESRKTSLSLFKQARLKLHKNGLKNS
>gid:449829  polA  DNA polymerase I
MNHIKNNPVIIIDGSLYLYASYYAFCNLENTSGKPCGAIYGMLKIIDNIF
KKYKNLKKIIIIFDSSRKTFRNKLFKEYKKNRSSMPDLLVMQIQPLFEIL
KKIGIKTLTIPGIEADDVIGSLSYQLEKQGEKILILSHDKDMLQLVTENI
NIFHKKNNCIITSEIIQEKYGIKPKEFIDFLALMGDATDNIPGVPKIGIK
TALFLINKFSNIENIYNNIEKIKSLPLRNAKNISIQLKNNKERALLSYKL
ARIKLDIPIDIKLKDIILKKYCSKNTFQIFKNYFSS
>gid:449518  priA  primosomal protein N'
MPDFMCPIIGGRILVPFNSKDVIGIVASFYKKNNVDQANFKHIKALIDTE
SLYSNMVLDIISWISNNYHCPAGNLFFSILPKILHSDYIIKNKYICQWSI
TKKGQELNLNYFKRRKKQLYVLLILKKKHILSTELKKYNISKIILKKLEI
QELCKVNLNYKISFKRKIIRTKKKLFFNKKISIVLNDVLKKQCFSSWLLT
RVNLYLKVKFYLGLIQSVLYKGVQILILVPYIKNINTIAFFLEKYFNASI
DVMHSKLTSSKYFSNWVRTKNGENSIVIGTGKSIFLPFLKLGLIILLEEH
NLKYKSINQCRYNIRDLGILRAYKEKIPIILDSETPSLKTLNNVLHRKCF
YIKLNKYNHVNQINNNIINLKTEKIKFGLSLTLINEIYKNFTGKQVLLIF
NKFVLFFFVLMCQKCNEIFKCTNCDDYFEINQYRNILFCKFCLIQIKKPI
FCYNCGSFSLIVFKIGAEEIKKEMHSIFPKIPFFFFLNEKNINKNILNTK
SFEFAISSPCIIIVTEELVQNYYFPHVKLISLICIDNYFLSFNYRAMEYF
AQFYINLNQLTRSTKKSCKIFIQTSFPNDINLKEICNNGYFSFSKKAMAI
RKSFLLPPWSFQTIVYSASTNTKYNIIFLSLMRKILQKKSRKYNCFLWVL
GPNNAFLSINKHKYFHQLLIQCSSRVALNNVLNESIDVINIFTISKRVKW
FIDIEPN
>gid:449852  recB  exodeoxyribonuclease V 135 kD polypeptide
MKIDSLKEKLNIFKIPLNGIKLIEASAGTGKTFTIVLLYLRLLLGIGEKK
IYKKKLLVHEILVVTFTNKAKEELYIRIKDGIQNMYLTCINKTTSDSSFQ
FFFKEIHDIKEAIYVLKRAQNDMNSSSIYTIHSFCQHILQLHTFHFNDIF
EEKIIENEDNLYLQATQDFWRRFFYTLPEDIIKIIYQDYKSPDHLLKTIK
PFFYIKSINFPTKILNNKKLIMYHEENIKKIIFFKEMWLIYHKIIQKTIN
DLEINKKIYSKFNLIKWINKITEWAKSETKDYTIPSILKYFTKKNIEKNT
INNTCSKYIIFEESEKILKKKFSLKNVIIIYAVKKIHQFLLKEKKKKSLI
GFNDLLSILLKTIKKEKFLKDLIIKKYPAAFIDEFQDTDIQQYKIFNLLY
KKNKTTVLFLIGDPKQAIYSFRGADIFSYLYAKSKIKKYYYLDTNWRSSI
NICKSINFLFSQNINPFIFKNIPYIPVVPSSKNLKMNFTINDVAQTPISF
FLQEEKEVSIDDYQVWISKQCANEISFWLTCAKTGKAKITTKNGEKILTA
NDIAILVRNRKEADLIQDELEKLNIISIYSSNKNSVFQTLDAQELLWILE
SILEPENEILLQQSMASHILKKLSLVVENKTISNKNSYFIIEKLYEYHDI
WEKIGVFQMIKIMILEYQKNSFCTEINENHIKNLNFLHIGELLQEQFQFF
HKKISLIRWFQKKISTKTQPEYNESIKCFDESPSIKIITIHKSKGLEYPI
VWIPFSIDFKKSTLAIYHDQKSLKTFFDENYSNKFLKIADEERLAEDIRF
LYVALTRSILHCSIGLACLIKKIIKNRNNSDIHQSGLGFTIQGGKTMNYE
GLLEKLKKLSINNFIEVKNNTDNFSFSRKPQTISLICKNKFLNKKNIRNT
WSITSFSQLNKINKLSKHHQKEVALKELCIKNQEKKNQSLLTIHNFPKGK
KTGLMIHYILKNLHVLKNKNSNWFSCILEKYNIHIKWTSVLIYWIKNIIN
TPLNDEKIILSRIDEKSSIRELEFFFPIKNMLYSTELNKIIQSINPTSIT
SPQLSFNPVKGMLTGFVDLVFIWKKKYYILDYKSNWLGKNNNFYSSIHIN
KEIVKKRYHLQYQIYTIAIHKYLQKKLKNYNYKDDFGGVFYFFLRAIDCP
KKNNGIFYTMPNYSLIKKTMTLIS
>gid:449851  recC  exodeoxyribonuclease V 125 kD polypeptide
MFTIYKSNSLNTLLLKAYHIIEEKPFSNIFEKEIFIYDNKVLFQYLNIFI
AEKKGISANFKFYHPNDFIWKLFKIILSKKELKNIFTHSMIIWEIIKILD
NKKFFENCSKKKDMIKKFKFSFLMASIFKKYILYRPEWINQWEIEKNISI
FDKNEQWQIKLWMEIIHNTKKINQSSDHFANLFYNIQKIIKEKKIKKKYL
PKRFFIISSFSMNPSYIKIFQNISIYTDIYFLYITPFKKNIFNFIQDNKI
FTDIKIEKKNILNDSLITLWGQYEEIYYFYILKSKKNKVINCFKKNKNKS
LLSQIKNNFFNDSEFTRKKRFLEISDHSISINICFNKKNEIEVLYEKLLI
FLNENSSIKPGDIVVTSFSLDTYISSINLIFQSIDNKKTIPFFIAKKSSK
TTEIMLWSFKKILNLSNSRFENEEILELLDVPEIAEKFNFSEEEIKILYH
WIEETNIRWGINEKHKNYLLFPKNKQNTWFYGIEKLLLSYAMNDTEKIWN
GVLSCSFINGSRSELIGKLISFIKILEKWQKKLSKLQYLTYWRSLYSDLV
SDFFQNNTKIEKSIQIIQKKWIEIIDDSLSSNYLKKISINILKKIFFYKY
YDNNHEIFLPGVVNFCYPDSVCYIPFKVICMIGTDHTSIPKTNYLDNFNL
LKKYPLIGDINLYQKYSYLFVQSLSCAEKYFYISYIGYSVKDESKVHPSI
LVDQLLNYITLNFCFIGDQNLSYKENSKKITKYLCKKHKKQFFYETKNIE
SFIQDDIKNDFKHTEKNISHKNLLKKNTDNEINLKDLINFWKHPIRYFYN
SHLKIKIRQKKQKINTTETFLVNPLNSFKIKNKLLDYIIHNKNITKLYQH
YLLSGKLPYHFFGEIFWIKNIKEMKLIANKVMQYRIEKEEKKINLNIEKY
QIYGVLSEIQSTGLLRWKTSSIRYSDRIALWLEHLIYSILGGCGKSKIIG
YKSQIWSFSSLNSHRAHSYLLEYIKGYIKGMKEPLFLTKSGASWLDQVYD
ERNNCIKNDYYTKIKAYKKLLYTWKGDNYTEGEQEDYYLKKTITISNKKN
IKKICESAEKWLIPILKNKG
>gid:449853  recD  exodeoxyribonuclease V 67 kD polypeptide
MLILLKKAVKLKIIRPIDFYFSQFIAQKNNIVMLVAACVSYESSRGYISL
PIKYFEKHYFFSSSNEVFIKKILTLLEKKINWPVELLKHASIGNGGTSTP
LVLHKKKIYLYKMWKSESNIFNYLYTKNKKNKINQKKCSKILENLFPQKN
MSFQKIAVALTLINNITFIIGGPGTGKTTTILKIIIALIKSSKKSIKIQL
SAPTGKATTHLNEILKNNIFDLYFSEKEKCSLPSTATTIHQLLGIQKISQ
KSFFNKSNCLDLDVLIIDEISMVDILMMEKILSSISKNTKLIFIGDHNQL
GPIESGSILRKICYYANDGYSFKSMISIEKLTQYKLCKKINKKTTNFISD
NICVLNKNYRFNKNSGIYTLSNAIFKKKTRIIESLFDNSIKNIFFYETNS
SEQYKKMIKNICLNYEDFWEKIYKKATMKEIIESFQNYQVLCILHDGLFG
VNIINKKLEENMYKKNIIKYFYIDGEEWYIGKPIMIINNNRALNVSNGNI
GITNINKNGILQVSFLKENNTINNIPVKILRNYKTAWAITVHKSQGSEFM
NTALILPNFNSHILNKDTLYTGITRSRKILSIFSDKKIFLNTIFKNTNKI
LF
>gid:449996  rep  ATP-dependent DNA helicase Rep
MSLNFSQKNAVELTNGPCLILAGAGSGKTKVIINKIIYLINHCQYEPDNI
AAVTFTNKAAYEMRIRLSKYLNIPEIKKIIISTFHSLGLEIIKKEIDALE
LNNNFTLLDEKDQILLLKKICKKEIKNNIQLLKKLNFMISYWKNKFLTPL
QVQLLAKSSQEKDFAYVYEQYTNYLYKANILDFDDLICMPTLLLKNNKKI
KIRWQKKISYLLVDEYQDTNNSQYELIKMLANKNSDFTLVGDDDQSIYSW
RGANPQNIFLLKKDFPNLKIIKMEHNYRSSGRILKAANSLIANNIHYLEK
KLFSQLKYGNLIKVLIGKNEENEAQKIVKKIISQYAKKKIKYRDFAILYR
GNYQSRILEKALIKENIPYNISEKSSFFSRPEIKDLLSYLRVVINRDDNH
AFMRIVNIPSRQIGKTTLKKLEEWANKKHVSLFQASNNIEIKKFLNENTI
KKIKNFISKIEKFTAWSCLKPSNIIDDIVDDLEYEKWLSKFLKDPNKIKN
SINNVHTLSQWFKNMIKGDDFEKPMTLFQIVTRMTIRDILDDNIIKEQQD
RVQLMTLHASKGLEFPAVFIIGMCEGILPNQKSIDNDNIEEERRLTYVGI
TRAKKQLFFTYCYKRTQYGQILDMLPSRFLFELPQEDLKWEKKIF
>gid:449586  rnt  ribonuclease T
MSTNQEFNLLSNRFRTFYPVVIDIETAGFNANTDAVLEIAIITLKMDELG
WLHKEDTLHFHIEPFKGSIINSDAIAFNKIDPFNPLRGAISEKIAIQSIL
KKVRNGIKIQGCSRGIVVAHNANFDHNFLMAAIQRVKIKNNPFHPFATFD
TAALSGLVVGQTVLSKACKAIGLSFDNHQAHSALYDTLQTANLFCELVNR
WKRLGGWPVDIKKNNSTSNKY
>gid:449953  sbcB  exodeoxyribonuclease I
MIQFQKKTPNFLFYDYETFGIHTALDKPAQFACIRTDINLNIIDDPQYFY
CFPSDDYLPDPGSVLITHITPQYTEKNGTNEYNFSQKIYDILMQSNTCVV
GYNNINFDDEITRNIFYRNFFDPYEWSWKNGNSRWDILNLLRACYALRPT
GINWPKNELGLTSFKLSDLTKTNNIVHLNAHNAVSDVYATIEIAKLVKKK
QPRLFDFFFKIRKKNELYKLIDLRNFQPIIYISAYFGAIYHNMSCILPIA
WHENNSNILIAIDLFKDIKTLINMCKKICFDSIFIKNLLDSGVVLLHLNR
CPILAPIQVIRKEDYNRLNFHRFSLNKKIELIKKNMFFIQNIKIIFSKNN
NTNQFFNVDLEIYNGFFNSKDKKKIQIIRNTDPVFLKHIFCNFHDSRLKN
LFFRYRARNFFIH
>gid:449943  ssb  single-strand binding protein
MASRGVNKVILIGHLGQDPEVRYMPNGNAVVNMTLATSENWKDKNTGENK
EKTEWHRIVLFGKLAEIAGEYLRKGSQVYIEGSLQTRKWQDQNGLERYTT
EIIVNIGGTMQMLGNRNSNLQAMTVNDKNSTGIKIKKTDAVEFDKKIETH
ESNKDLTHSPSEIDFDDEIPF
>gid:449682  topA  DNA topoisomerase I
MQKSLVIVESPAKAKTINQYLGSEYIVKSSIGHIRDLTKGKLYNKEKNKK
FLNENFIEKTNENKILIKQMGIDPYQNWKFEYHILPGKEKIISELKYIAN
QVKHIYLATDLDREGEAIAWHLKEVIGGDSSKFSRVVFNEITQHSIQKAF
KNVGHINMNRVHAQQARRFMDRIVGYMISPLLWKKIARGLSAGRVQSVAV
RIIADRESIIKNFVPEEYWKLDVSLISQDKKKINMDVTHYNNKKFRPINE
NEVSFAVEKIQKSSCIVKNYEEKISYLKAPAPFITSTLQQSASLRLGFSV
KKTMFLAQKLYEEGYITYMRTDSNYLSEYAIKKVRKYIKSNYGSNYLPKE
PNIYSNEKHSQEAHEAIRPSDIKIKNIDSDHLNSSAKKLYELIWNQFLAS
QMKSVKYKSITVTVLADMFKLQKSERIVMFQGWNKVLIEEKNVFSQFPIL
QTGSQLFINKVTPSQKFTKPPPRFSEASLVRELEKKGIGRPSTYSAITSK
IQDRGYVKIKKNKFYAEKMGEILTIRLKKSFSNLIDYNFTAHMEKKLDQV
AENKVTWRYLLDDFFKKFSEQLEQAKKSPEEGGMELNNIVPTSLNCPICC
KKMGIKTAITGVFLSCLGYNNTDNKKRCKKTINLITLNDFNKEQDNQKKI
SLQLIQKCDICNMYMDSYFINEKLKLHICANNPSCSGYKFEKGVFKSPIY
LSKTIQCEKCYNNMKLKIGPFGKFFTCINKICKNTRKILPNGEISDPKLE
PIPFPELLCKQSDAWFVLREGISGIFFAANTFPKSRETRSPFVEELVRFQ
HLLPEKIYYLSSAPVIDNYGNKTIVCFDKKKKTHYIASKKDGKFTGWSAV
FIDQKWCVINK
>gid:449581  ung  uracil-DNA glycosylase
MILSWKDVLSQEKKKKYFINIIRFLKKERLKKIIYPDQKDIFNAFFLTSF
NDIKVVILGQDPYFSKNQAHGLSFSVPKHVTIPPSLKNIYKELNTDFKKE
HIFHHGCLESWANQGVFLLNSILTVESGKPKSHSNIGWNIFTDKVISVIN
LYKNSVVFLFWGSNAQKKSHLINRKNHYILKAAHPSPLSAYRGFFGCKHF
SLTNKILLKTKKKPINWFLI
>gid:449983  yba4  hypothetical protein
MLHNLLLNPNQSNKTHPNTIDIYTDAIKTMFETNKNQTVSKKNDQNTYDL
EDENKLIDLENSYKKSLILLNILQKKIEQNILEKYNLEKNNNNITDNSDN
EIIQNTLIKKNS
>gid:449753  ycfH  hypothetical protein
MFLIDSHCHLDRLNYNLPLENIEDVLKKSYQNHVKNFLTVSTCISNFYNI
KKLFKKYNTIFYSCGVHPLNCKKELNLFHTIENLSNEIKKLSCIKDVIAL
GETGLDYYYSSDTKKIQQDFFREHIRVAIKLKKPIIVHSRNASEDTIKIL
QEENAEKCKGVLHSFTGDYNTACKLLDLGFYISCSGIITFKNSLELCKTI
RKIPLNRLLIETDSPYLSPAPYRGKGNQPAYLFYIAEYLSILKEIDIHAL
GHITTSNFRTLFNI
>gid:449421  yhhF  hypothetical protein
MNNSFFRKNSKIYIISGNLKGRKISFKNIPNLRPTTNQIRETLFEWLSKY
IKNSRCLDCFAGSGVLGIEAISRYAAFSTLLEIEKKTFLTLKKNIKELNI
YNVEIIRTNTLHWLKKTRNKPYDIIFIDPPYHQGLVKKTINLLENKKWIK
KNSFIYIEQEKKQSIIVPKNWTLYKKKITNQIQCYLYICST
>gid:449946  yqgF  hypothetical protein
MIVIAFDFGIKKIGVAVGENITKKGRPLSVLNAQNGCPNWQLVKNLIQYW
QPQFIVVGLPLNINGTKQKITNKSEKFANLLKYKFNIVVKMHDERLTTVE
AKSIIFKKNGFKGLKEEKIHSCAAVIILESWFNQY