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2024-05-26 01:54:31

Gene list

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COG category: Replication, recombination and repair
Organism: Buchnera aphidicola str. APS (Acyrthosiphon pisum), APS

Number of genes found: 42

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Hide UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Buchnera aphidicola str. APS (Acyrthosiphon pisum), APS
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
deaD ATP-dependent RNA helicase deaDRecName: Full=ATP-dependent RNA helicase DeaD; EC=3.6.4.13; AltName: Full=Cold-shock DEAD box protein A; chromosome CDS409362 1806 - 0.330011
dnaA chromosomal replication initiator protein dnaARecName: Full=Chromosomal replication initiator protein DnaA; chromosome CDS12554 1365 - 0.29011
dnaB replicative DNA helicaseRecName: Full=Replicative DNA helicase; EC=3.6.4.12; chromosome CDS582081 1380 + 0.324638
dnaC DNA replication protein dnaCRecName: Full=DNA replication protein DnaC; chromosome CDS21614 741 - 0.296896
dnaE DNA polymerase III alpha chainRecName: Full=DNA polymerase III subunit alpha; EC=2.7.7.7; chromosome CDS262859 3486 + 0.261331
dnaG DNA primaseRecName: Full=DNA primase; EC=2.7.7.-; chromosome CDS60941 1734 - 0.246828
dnaN DNA polymerase III beta chainRecName: Full=DNA polymerase III subunit beta; EC=2.7.7.7; chromosome CDS11449 1101 - 0.236149
dnaQ DNA polymerase III epsilon chainRecName: Full=DNA polymerase III subunit epsilon; EC=2.7.7.7; chromosome CDS277113 714 + 0.235294
dnaX DNA polymerase III subunits gamma and tauRecName: Full=DNA polymerase III subunit gamma; EC=2.7.7.7; chromosome CDS531231 1086 + 0.274401
endA endonuclease IRecName: Full=Endonuclease-1; EC=3.1.21.1; AltName: Full=Endonuclease I; Short=Endo I; chromosome CDS446639 753 + 0.266932
fis factor-for-inversion stimulation proteinRecName: Full=DNA-binding protein Fis; chromosome CDS437630 297 - 0.239057
gyrA DNA gyrase subunit ARecName: Full=DNA gyrase subunit A; EC=5.99.1.3; chromosome CDS195562 2493 - 0.297232
gyrB DNA gyrase subunit BRecName: Full=DNA gyrase subunit B; EC=5.99.1.3; chromosome CDS8911 2412 - 0.281095
himA integration host factor alpha-subunitRecName: Full=Integration host factor subunit alpha; Short=IHF-alpha; chromosome CDS137200 309 + 0.265372
himD integration host factor beta-subunitRecName: Full=Integration host factor subunit beta; Short=IHF-beta; chromosome CDS340821 285 - 0.287719
holA DNA polymerase III delta subunitRecName: Full=DNA polymerase III subunit delta; EC=2.7.7.7; chromosome CDS486500 996 + 0.172691
holB DNA polymerase III delta' subunitRecName: Full=DNA polymerase III subunit delta; EC=2.7.7.7; chromosome CDS386618 981 + 0.2579
hupA DNA-binding protein hu-alphaRecName: Full=DNA-binding protein HU; chromosome CDS35308 279 - 0.268817
lig DNA ligase (NAD+)RecName: Full=DNA ligase; EC=6.5.1.2; AltName: Full=Polydeoxyribonucleotide synthase [NAD(+)]; chromosome CDS72432 2028 + 0.258383
mfd transcription-repair coupling factorRecName: Full=Transcription-repair-coupling factor; Short=TRCF; EC=3.6.4.-; chromosome CDS322648 2439 - 0.246822
mutL DNA mismatch repair protein mutLRecName: Full=DNA mismatch repair protein MutL; chromosome CDS602433 1755 - 0.217094
mutS DNA mismatch repair protein mutSRecName: Full=DNA mismatch repair protein MutS; chromosome CDS466372 2409 - 0.26235
mutT mutator mutT proteinRecName: Full=8-oxo-dGTP diphosphatase; Short=8-oxo-dGTPase; EC=3.6.1.55; AltName: Full=7,8-dihydro-8-oxoguanine-triphosphatase; AltName: Full=Mutator protein MutT; AltName: Full=dGTP pyrophosphohydrolase; chromosome CDS221477 375 + 0.226667
mutY A/G-specific adenine glycosylaseRecName: Full=A/G-specific adenine glycosylase; EC=3.2.2.-; chromosome CDS587804 1053 + 0.248813
nfo endonuclease IVRecName: Full=Probable endonuclease 4; EC=3.1.21.2; AltName: Full=Endodeoxyribonuclease IV; AltName: Full=Endonuclease IV; chromosome CDS143868 846 + 0.280142
nth endonuclease IIIRecName: Full=Endonuclease III; EC=4.2.99.18; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase; chromosome CDS122941 633 + 0.238547
phrB deoxyribodipyrimidine photolyaseRecName: Full=Deoxyribodipyrimidine photo-lyase; EC=4.1.99.3; AltName: Full=DNA photolyase; AltName: Full=Photoreactivating enzyme; chromosome CDS330827 1452 + 0.258264
polA DNA polymerase IRecName: Full=5-3 exonuclease; EC=3.1.11.-; chromosome CDS469696 861 + 0.218351
priA primosomal protein N'RecName: Full=Primosomal protein N; EC=3.6.4.-; AltName: Full=ATP-dependent helicase PriA; chromosome CDS123653 2124 + 0.213748
recB exodeoxyribonuclease V 135 kD polypeptideRecName: Full=RecBCD enzyme subunit RecB; EC=3.1.11.5; AltName: Full=Exonuclease V subunit RecB; Short=ExoV subunit RecB; AltName: Full=Helicase/nuclease RecBCD subunit RecB; chromosome CDS497248 3525 + 0.217021
recC exodeoxyribonuclease V 125 kD polypeptideRecName: Full=RecBCD enzyme subunit RecC; EC=3.1.11.5; AltName: Full=Exonuclease V subunit RecC; Short=ExoV subunit RecC; AltName: Full=Helicase/nuclease RecBCD subunit RecC; chromosome CDS494019 3213 + 0.209773
recD exodeoxyribonuclease V 67 kD polypeptideRecName: Full=RecBCD enzyme subunit RecD; EC=3.1.11.5; AltName: Full=Exonuclease V subunit RecD; Short=ExoV subunit RecD; AltName: Full=Helicase/nuclease RecBCD subunit RecD; chromosome CDS500778 1809 + 0.220011
rep ATP-dependent DNA helicase RepRecName: Full=ATP-dependent DNA helicase Rep; EC=3.6.4.12; chromosome CDS628113 1938 - 0.238906
rnt ribonuclease TRecName: Full=Ribonuclease T; EC=3.1.13.-; AltName: Full=Exoribonuclease T; Short=RNase T; chromosome CDS203578 666 - 0.313814
sbcB exodeoxyribonuclease IRecName: Full=Exodeoxyribonuclease I; Short=Exonuclease I; EC=3.1.11.1; AltName: Full=DNA deoxyribophosphodiesterase; Short=dRPase; chromosome CDS590182 1242 - 0.242351
ssb single-strand binding proteinRecName: Full=Single-stranded DNA-binding protein; Short=SSB; chromosome CDS580878 516 - 0.313953
topA DNA topoisomerase IRecName: Full=DNA topoisomerase 1; EC=5.99.1.2; AltName: Full=DNA topoisomerase I; AltName: Full=Omega-protein; AltName: Full=Relaxing enzyme; AltName: Full=Swivelase; AltName: Full=Untwisting enzyme; chromosome CDS309445 2586 + 0.276102
ung uracil-DNA glycosylaseRecName: Full=Uracil-DNA glycosylase; Short=UDG; EC=3.2.2.27; chromosome CDS199831 663 + 0.254902
yba4 hypothetical proteinRecName: Full=Uncharacterized protein BU585; AltName: Full=yba4; chromosome CDS618288 339 - 0.20649
ycfH hypothetical proteinRecName: Full=Uncharacterized deoxyribonuclease BU355; EC=3.1.21.-; chromosome CDS387632 795 + 0.257862
yhhF hypothetical proteinRecName: Full=Ribosomal RNA small subunit methyltransferase D; EC=2.1.1.171; AltName: Full=16S rRNA m2G966 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase; chromosome CDS22945 576 - 0.234375
yqgF hypothetical proteinRecName: Full=Putative Holliday junction resolvase; EC=3.1.-.-; chromosome CDS584680 408 + 0.259804