Gene list
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COG category: Replication, recombination and repair
Organism: Nitrosomonas europaea ATCC 19718, ATCC 19718
Number of genes found: 243
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| Nitrosomonas europaea ATCC 19718, ATCC 19718 | |||||||||
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| Name | Locus tag | Product / Description | UniProt / TrEMBL protein name | Genomic element | Type | Begin | Length | Strand | GC-content |
| NA | NE0093 | recQ; ATP-dependent DNA helicase | SubName: Full=RecQ ATP-dependent DNA helicase; EC=3.6.1.-; | chromosome | CDS | 115940 | 4374 | - | 0.57636 |
| NA | NE1106 | possible transposase | SubName: Full=Possible transposase; | chromosome | CDS | 1198601 | 408 | + | 0.497549 |
| NA | NE0120 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 148159 | 951 | - | 0.545741 |
| NA | NE2445 | Integrase, catalytic core | SubName: Full=Integrase, catalytic core; | chromosome | CDS | 2669025 | 1044 | + | 0.478927 |
| NA | NE1367 | possible ISA0963-4, putative transposase | SubName: Full=Possible ISA0963-4, putative transposase; | chromosome | CDS | 1489071 | 411 | + | 0.46472 |
| NA | NE2238 | Transposase IS200 like | SubName: Full=Transposase IS200 like; | chromosome | CDS | 2427598 | 444 | - | 0.509009 |
| NA | NE1991 | Transposase IS4 family | SubName: Full=Transposase IS4 family; | chromosome | CDS | 2151773 | 369 | + | 0.466125 |
| NA | NE1219 | UMUC family (DNA-repair) | RecName: Full=DNA polymerase IV; Short=Pol IV; EC=2.7.7.7; | chromosome | CDS | 1327791 | 1158 | - | 0.481002 |
| NA | NE1351 | Integrase, catalytic core | SubName: Full=Integrase, catalytic core; | chromosome | CDS | 1477435 | 1044 | + | 0.477969 |
| NA | NE1557 | putative transposase | SubName: Full=Putative transposase; | chromosome | CDS | 1692646 | 360 | + | 0.508333 |
| NA | NE1788 | transposase | SubName: Full=Transposase; | chromosome | CDS | 1931964 | 369 | + | 0.528455 |
| NA | NE2012 | Integrase, catalytic core | SubName: Full=Integrase, catalytic core; | chromosome | CDS | 2173285 | 951 | + | 0.520505 |
| NA | NE1667 | conserved hypothetical protein | RecName: Full=Putative Holliday junction resolvase; EC=3.1.-.-; | chromosome | CDS | 1804272 | 447 | - | 0.52349 |
| NA | NE0662 | Transposase IS4 family | SubName: Full=Transposase IS4 family; | chromosome | CDS | 719259 | 627 | + | 0.516746 |
| NA | NE0511 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 549794 | 246 | + | 0.48374 |
| NA | NE2273 | transposase | SubName: Full=Transposase; | chromosome | CDS | 2463295 | 369 | + | 0.525745 |
| NA | NE0155 | Integrase, catalytic core | SubName: Full=Integrase, catalytic core; | chromosome | CDS | 179188 | 906 | + | 0.593819 |
| NA | NE0239 | Integrase, catalytic core | SubName: Full=Integrase, catalytic core; | chromosome | CDS | 273266 | 1044 | + | 0.479885 |
| NA | NE1348 | Integrase, catalytic core | SubName: Full=Integrase, catalytic core; | chromosome | CDS | 1475472 | 507 | + | 0.463511 |
| NA | NE0940 | putative DNA transport competence protein, ComEA | SubName: Full=Putative DNA transport competence protein, ComEA; | chromosome | CDS | 1025874 | 363 | - | 0.366391 |
| NA | NE1516 | Uncharacterized protein family UPF0006 | SubName: Full=Uncharacterized protein family UPF0006; | chromosome | CDS | 1649817 | 765 | - | 0.526797 |
| NA | NE1843 | Integrase, catalytic core | SubName: Full=Integrase, catalytic core; | chromosome | CDS | 1990579 | 1011 | + | 0.523244 |
| NA | NE0969 | possible N6-adenine-specific methylase | SubName: Full=Possible N6-adenine-specific methylase; EC=2.1.1.-; | chromosome | CDS | 1053981 | 552 | - | 0.501812 |
| NA | NE2516 | Transposase IS911 HTH and LZ region | SubName: Full=Transposase IS911 HTH and LZ region; | chromosome | CDS | 2749422 | 324 | - | 0.512346 |
| NA | NE1840 | Integrase, catalytic core | SubName: Full=Integrase, catalytic core; | chromosome | CDS | 1986878 | 1044 | + | 0.478927 |
| NA | NE0288 | Integrase, catalytic core | SubName: Full=Integrase, catalytic core; | chromosome | CDS | 316357 | 951 | + | 0.521556 |
| NA | NE1132 | transposase | SubName: Full=Transposase; | chromosome | CDS | 1230529 | 351 | - | 0.490029 |
| NA | NE2520 | ATP-dependent DNA helicase RecQ | SubName: Full=ATP-dependent DNA helicase RecQ; | chromosome | CDS | 2752609 | 2079 | + | 0.601251 |
| NA | NE1053 | Uncharacterized ATPase related to the helicase subunit of the Holliday junction resolvase | SubName: Full=Uncharacterized ATPase related to the helicase subunit of the Holliday junction resolvase; | chromosome | CDS | 1140158 | 1320 | + | 0.543939 |
| NA | NE2166 | UvrD/REP helicase | SubName: Full=UvrD/REP helicase; | chromosome | CDS | 2351482 | 3468 | - | 0.555363 |
| NA | NE0830 | DNA mismatch repair protein MutS family, C-terminal domain | SubName: Full=DNA mismatch repair protein MutS family, C-terminal domain; | chromosome | CDS | 901779 | 1884 | + | 0.519639 |
| NA | NE0245 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 281568 | 456 | + | 0.528509 |
| NA | NE2013 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 2174813 | 294 | - | 0.55102 |
| NA | NE0562 | Integrase, catalytic core | SubName: Full=Integrase, catalytic core; | chromosome | CDS | 608474 | 951 | + | 0.521556 |
| NA | NE0744 | conserved hypothetical protein | SubName: Full=Transposase; SubName: Full=Uncharacterized protein; | chromosome | CDS | 805211 | 972 | - | 0.505144 |
| NA | NE1558 | putative transposase | SubName: Full=Putative transposase; | chromosome | CDS | 1693067 | 414 | + | 0.442029 |
| NA | NE0560 | transposase | SubName: Full=Transposase; | chromosome | CDS | 607648 | 369 | + | 0.525745 |
| NA | NE2311 | possible helicase (Snf2/Rad54 family) | SubName: Full=Possible helicase (Snf2/Rad54 family); | chromosome | CDS | 2508925 | 2898 | - | 0.587647 |
| NA | NE1995 | Integrase, catalytic core | SubName: Full=Integrase, catalytic core; | chromosome | CDS | 2155540 | 852 | - | 0.539906 |
| NA | NE0814 | Integrase, catalytic core | SubName: Full=Integrase, catalytic core; | chromosome | CDS | 884935 | 1044 | - | 0.478927 |
| NA | NE0719 | Uncharacterised protein family UPF0102 | RecName: Full=UPF0102 protein NE0719; | chromosome | CDS | 774690 | 357 | - | 0.546219 |
| NA | NE1807 | putative ATP-dependent RNA helicase protein | SubName: Full=Putative ATP-dependent RNA helicase protein; | chromosome | CDS | 1954496 | 1374 | + | 0.53639 |
| NA | NE0134 | transposase | SubName: Full=Transposase; SubName: Full=Uncharacterized protein; | chromosome | CDS | 160713 | 972 | - | 0.505144 |
| NA | NE1675 | Integrase, catalytic core | SubName: Full=Integrase, catalytic core; | chromosome | CDS | 1809713 | 1044 | + | 0.479885 |
| NA | NE0708 | Integrase, catalytic core | SubName: Full=Integrase, catalytic core; | chromosome | CDS | 767637 | 852 | - | 0.539906 |
| NA | NE0939 | Integrase, catalytic core | SubName: Full=Integrase, catalytic core; | chromosome | CDS | 1024553 | 1044 | - | 0.478927 |
| NA | NE0098 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 126117 | 663 | - | 0.470588 |
| NA | NE2190 | Maturase; integron/retron-type RNA-directed DNA polymerase (Reverse transcriptase); part of type II intron | SubName: Full=Maturase integron/retron-type RNA-directed DNA polymerase (Reverse transcriptase) part of type II intron; | chromosome | CDS | 2378248 | 1314 | - | 0.633942 |
| NA | NE0272 | possible transposase | SubName: Full=Possible transposase; | chromosome | CDS | 303253 | 408 | - | 0.504902 |
| NA | NE0110 | hypothetical protein | RecName: Full=CRISPR-associated endoribonuclease Cas2 1; EC=3.1.-.-; | chromosome | CDS | 140382 | 318 | - | 0.512579 |
| NA | NE0711 | Uncharacterised protein family UPF0102 | RecName: Full=UPF0102 protein NE0711; | chromosome | CDS | 769783 | 357 | - | 0.52381 |
| NA | NE0188 | Integrase, catalytic core | SubName: Full=Integrase, catalytic core; | chromosome | CDS | 226510 | 1044 | + | 0.479885 |
| NA | NE0845 | DUF196 | RecName: Full=CRISPR-associated endoribonuclease Cas2 3; EC=3.1.-.-; | chromosome | CDS | 920552 | 291 | + | 0.43299 |
| NA | NE1264 | Integrase, catalytic core | SubName: Full=Integrase, catalytic core; | chromosome | CDS | 1383968 | 1044 | - | 0.478927 |
| NA | NE0709 | Transposase IS911 HTH and LZ region | SubName: Full=Transposase IS911 HTH and LZ region; | chromosome | CDS | 768542 | 324 | - | 0.512346 |
| NA | NE0268 | Integrase, catalytic core | SubName: Full=Integrase, catalytic core; | chromosome | CDS | 299643 | 1044 | - | 0.479885 |
| NA | NE1261 | Integrase, catalytic core | SubName: Full=Integrase, catalytic core; | chromosome | CDS | 1379875 | 852 | + | 0.532864 |
| NA | NE0341 | Transposase IS4 family | SubName: Full=Transposase IS4 family; | chromosome | CDS | 380952 | 369 | - | 0.466125 |
| NA | NE2412 | transposase | SubName: Full=Transposase; | chromosome | CDS | 2625692 | 369 | + | 0.525745 |
| NA | NE1182 | Helix-turn-helix protein, CopG family | SubName: Full=Helix-turn-helix protein, CopG family; | chromosome | CDS | 1279707 | 243 | - | 0.432099 |
| NA | NE1853 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 2001694 | 663 | - | 0.500754 |
| NA | NE2532 | Integrase, catalytic core | SubName: Full=Integrase, catalytic core; | chromosome | CDS | 2770889 | 852 | - | 0.539906 |
| NA | NE2414 | Integrase, catalytic core | SubName: Full=Integrase, catalytic core; | chromosome | CDS | 2626458 | 1044 | - | 0.478927 |
| NA | NE2318 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 2519624 | 411 | - | 0.50365 |
| NA | NE2446 | Transposase IS4 family | SubName: Full=Transposase IS4 family; | chromosome | CDS | 2671639 | 576 | - | 0.505208 |
| NA | NE2109 | Transposase IS911 HTH and LZ region | SubName: Full=Transposase IS911 HTH and LZ region; | chromosome | CDS | 2293855 | 324 | - | 0.512346 |
| NA | NE0935 | Integrase, catalytic core | SubName: Full=Integrase, catalytic core; | chromosome | CDS | 1021355 | 729 | - | 0.544582 |
| NA | NE1760 | Integrase, catalytic core | SubName: Full=Integrase, catalytic core; | chromosome | CDS | 1902116 | 1044 | + | 0.478927 |
| NA | NE0111 | Protein of unknown function DUF48 | RecName: Full=CRISPR-associated endonuclease Cas1; EC=3.1.-.-; | chromosome | CDS | 140733 | 984 | - | 0.548781 |
| NA | NE0880 | probable ATP-dependent DNA helicase-related protein | SubName: Full=Probable ATP-dependent DNA helicase-related protein; | chromosome | CDS | 959532 | 1941 | - | 0.516744 |
| NA | NE2385 | Staphylococcus nuclease (SNase) homologues | SubName: Full=Staphylococcus nuclease (SNase) homologues; | chromosome | CDS | 2591501 | 876 | + | 0.515982 |
| NA | NE1222 | Transposase IS4 family | SubName: Full=Transposase IS4 family; | chromosome | CDS | 1331070 | 750 | - | 0.504 |
| NA | NE1552 | Transposase IS4 family | SubName: Full=Transposase IS4 family; | chromosome | CDS | 1690373 | 369 | - | 0.466125 |
| NA | NE2097 | Integrase, catalytic core | SubName: Full=Integrase, catalytic core; | chromosome | CDS | 2284248 | 615 | + | 0.518699 |
| NA | NE2411 | Integrase, catalytic core | SubName: Full=Integrase, catalytic core; | chromosome | CDS | 2624480 | 993 | + | 0.519637 |
| NA | NE0561 | Transposase IS4 family | SubName: Full=Transposase IS4 family; | chromosome | CDS | 607821 | 576 | + | 0.506944 |
| NA | NE2023 | possible transposase | SubName: Full=Possible transposase; | chromosome | CDS | 2186571 | 408 | + | 0.5 |
| NA | NE2466 | putative lipoprotein | SubName: Full=Putative lipoprotein; | chromosome | CDS | 2691464 | 540 | + | 0.514815 |
| NA | NE1631 | Transposase IS4 family | SubName: Full=Transposase IS4 family; | chromosome | CDS | 1762975 | 369 | + | 0.476965 |
| NA | NE0931 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1017952 | 654 | + | 0.524465 |
| NA | NE1093 | Transposase IS4 family | SubName: Full=Transposase IS4 family; | chromosome | CDS | 1184950 | 1524 | + | 0.526903 |
| NA | NE1260 | Transposase IS911 HTH and LZ region | SubName: Full=Transposase IS911 HTH and LZ region; | chromosome | CDS | 1379498 | 324 | + | 0.512346 |
| NA | NE2536 | Integrase, catalytic core | SubName: Full=Integrase, catalytic core; | chromosome | CDS | 2775828 | 951 | + | 0.520505 |
| NA | NE1698 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1828413 | 972 | - | 0.505144 |
| NA | NE0452 | Transposase IS911 HTH and LZ region | SubName: Full=Transposase IS911 HTH and LZ region; | chromosome | CDS | 493269 | 324 | - | 0.512346 |
| NA | NE1398 | putative DNA polymerase-related protein, bacteriophage-type | SubName: Full=Putative DNA polymerase-related protein, bacteriophage-type; EC=2.7.7.7; | chromosome | CDS | 1528877 | 744 | - | 0.580645 |
| NA | NE2028 | Integrase, catalytic core | SubName: Full=Integrase, catalytic core; | chromosome | CDS | 2188842 | 963 | - | 0.520249 |
| NA | NE1366 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1488439 | 696 | + | 0.488506 |
| NA | NE0716 | Transposase IS4 family | SubName: Full=Transposase IS4 family; | chromosome | CDS | 772659 | 369 | + | 0.471545 |
| NA | NE1522 | Transposase IS4 family | SubName: Full=Transposase IS4 family; | chromosome | CDS | 1653797 | 369 | + | 0.466125 |
| NA | NE0252 | Transposase IS911 HTH and LZ region | SubName: Full=Transposase IS911 HTH and LZ region; | chromosome | CDS | 287757 | 324 | + | 0.512346 |
| NA | NE1523 | Integrase, catalytic core | SubName: Full=Integrase, catalytic core; | chromosome | CDS | 1654581 | 1044 | + | 0.478927 |
| NA | NE1316 | NUDIX hydrolase | RecName: Full=RNA pyrophosphohydrolase; EC=3.6.1.-; AltName: Full=(Di)nucleoside polyphosphate hydrolase; | chromosome | CDS | 1436035 | 564 | - | 0.533688 |
| NA | NE2178 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 2365414 | 2730 | - | 0.559707 |
| NA | NE1347 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1474936 | 696 | + | 0.487069 |
| NA | NE0518 | transposase | SubName: Full=Transposase; | chromosome | CDS | 556781 | 369 | + | 0.525745 |
| NA | NE1816 | Integrase, catalytic core | SubName: Full=Integrase, catalytic core; | chromosome | CDS | 1965437 | 852 | + | 0.539906 |
| NA | NE1940 | Integrase, catalytic core | SubName: Full=Integrase, catalytic core; | chromosome | CDS | 2094814 | 951 | - | 0.519453 |
| NA | NE0184 | NUDIX hydrolase | SubName: Full=NUDIX hydrolase; | chromosome | CDS | 222534 | 450 | - | 0.491111 |
| NA | NE0162 | Integrase, catalytic core | SubName: Full=Integrase, catalytic core; | chromosome | CDS | 199541 | 1044 | - | 0.478927 |
| NA | NE1271 | Integrase, catalytic core | SubName: Full=Integrase, catalytic core; | chromosome | CDS | 1388940 | 852 | + | 0.532864 |
| NA | NE2228 | Integrase, catalytic core | SubName: Full=Integrase, catalytic core; | chromosome | CDS | 2415225 | 1044 | - | 0.479885 |
| NA | NE2201 | Transposase IS4 family | SubName: Full=Transposase IS4 family; | chromosome | CDS | 2390966 | 576 | + | 0.505208 |
| NA | NE2470 | NUDIX hydrolase:Conserved hypothetical protein 52 | SubName: Full=Uncharacterized protein; | chromosome | CDS | 2695248 | 603 | - | 0.535655 |
| NA | NE2504 | Transposase IS4 family | SubName: Full=Transposase IS4 family; | chromosome | CDS | 2737580 | 879 | - | 0.513083 |
| NA | NE2098 | Maturase; integron/retron-type RNA-directed DNA polymerase (Reverse transcriptase); part of type II intron | SubName: Full=Maturase integron/retron-type RNA-directed DNA polymerase (Reverse transcriptase) part of type II intron; | chromosome | CDS | 2285687 | 1314 | + | 0.633942 |
| NA | NE0451 | Integrase, catalytic core | SubName: Full=Integrase, catalytic core; | chromosome | CDS | 492364 | 852 | - | 0.539906 |
| NA | NE0244 | Integrase, catalytic core | SubName: Full=Integrase, catalytic core; | chromosome | CDS | 280152 | 1314 | - | 0.534247 |
| NA | NE1789 | Transposase IS4 family | SubName: Full=Transposase IS4 family; | chromosome | CDS | 1932137 | 576 | + | 0.506944 |
| NA | NE2447 | transposase | SubName: Full=Transposase; | chromosome | CDS | 2672019 | 369 | - | 0.525745 |
| NA | NE1880 | Integrase, catalytic core | SubName: Full=Integrase, catalytic core; | chromosome | CDS | 2032033 | 1044 | - | 0.479885 |
| NA | NE1470 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1605011 | 384 | + | 0.513021 |
| NA | NE1107 | Transposase IS4 family | SubName: Full=Transposase IS4 family; | chromosome | CDS | 1199008 | 369 | + | 0.471545 |
| NA | NE1553 | possible transposase | SubName: Full=Possible transposase; | chromosome | CDS | 1690663 | 474 | - | 0.50211 |
| NA | NE2442 | Integrase, catalytic core | SubName: Full=Integrase, catalytic core; | chromosome | CDS | 2666243 | 1044 | - | 0.479885 |
| NA | NE2413 | Transposase IS4 family | SubName: Full=Transposase IS4 family; | chromosome | CDS | 2625865 | 537 | + | 0.510242 |
| NA | NE0806 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 875773 | 648 | + | 0.445988 |
| NA | NE0112 | hypothetical protein | RecName: Full=CRISPR-associated endoribonuclease Cas2 2; EC=3.1.-.-; | chromosome | CDS | 141738 | 342 | - | 0.511696 |
| NA | NE0749 | Transposase IS911 HTH and LZ region | SubName: Full=Transposase IS911 HTH and LZ region; | chromosome | CDS | 811455 | 333 | - | 0.501502 |
| NA | NE2541 | Site-specific recombinase | SubName: Full=Site-specific recombinase; | chromosome | CDS | 2780172 | 1356 | + | 0.623156 |
| NA | NE1586 | transposase | SubName: Full=Transposase; | chromosome | CDS | 1715332 | 369 | - | 0.525745 |
| NA | NE1061 | Integrase, catalytic core | SubName: Full=Integrase, catalytic core; | chromosome | CDS | 1150861 | 951 | - | 0.520505 |
| NA | NE0519 | Transposase IS4 family | SubName: Full=Transposase IS4 family; | chromosome | CDS | 556954 | 576 | + | 0.506944 |
| NA | NE2309 | Adenine specific DNA methylase Mod | SubName: Full=Adenine specific DNA methylase Mod; | chromosome | CDS | 2504137 | 1704 | - | 0.529343 |
| NA | NE0119 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 146417 | 1743 | - | 0.497418 |
| NA | NE0715 | possible transposase | SubName: Full=Possible transposase; | chromosome | CDS | 772252 | 408 | + | 0.497549 |
| NA | NE2469 | Transposase IS4 family | SubName: Full=Transposase IS4 family; | chromosome | CDS | 2694191 | 879 | - | 0.513083 |
| NA | NE1990 | possible transposase | SubName: Full=Possible transposase; | chromosome | CDS | 2151366 | 408 | + | 0.502451 |
| NA | NE2024 | Transposase IS4 family | SubName: Full=Transposase IS4 family; | chromosome | CDS | 2186978 | 369 | + | 0.471545 |
| NA | NE0271 | Transposase IS4 family | SubName: Full=Transposase IS4 family; | chromosome | CDS | 302885 | 369 | - | 0.476965 |
| NA | NE1122 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1215138 | 606 | - | 0.524752 |
| NA | NE0197 | conserved hypothetical protein | RecName: Full=Primosomal replication protein n; | chromosome | CDS | 234366 | 327 | - | 0.437309 |
| NA | NE2483 | Integrase, catalytic core | SubName: Full=Integrase, catalytic core; | chromosome | CDS | 2710395 | 951 | - | 0.521556 |
| NA | NE2533 | Transposase IS911 HTH and LZ region | SubName: Full=Transposase IS911 HTH and LZ region; | chromosome | CDS | 2771794 | 324 | - | 0.512346 |
| NA | NE2156 | Transposase IS911 HTH and LZ region | SubName: Full=Transposase IS911 HTH and LZ region; | chromosome | CDS | 2340405 | 324 | - | 0.512346 |
| NA | NE0517 | Integrase, catalytic core | SubName: Full=Integrase, catalytic core; | chromosome | CDS | 555685 | 951 | - | 0.521556 |
| NA | NE2108 | Integrase, catalytic core | SubName: Full=Integrase, catalytic core; | chromosome | CDS | 2292950 | 852 | - | 0.539906 |
| NA | NE0228 | CHC2 zinc finger | RecName: Full=DNA primase; EC=2.7.7.-; | chromosome | CDS | 258712 | 1803 | + | 0.470882 |
| NA | NE0447 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 487118 | 714 | - | 0.492997 |
| NA | NE2011 | Transposase IS4 family | SubName: Full=Transposase IS4 family; | chromosome | CDS | 2172856 | 369 | + | 0.471545 |
| NA | NE1925 | Integrase, catalytic core | SubName: Full=Integrase, catalytic core; | chromosome | CDS | 2078725 | 1044 | - | 0.479885 |
| NA | NE0981 | HhH-GPD | SubName: Full=HhH-GPD; | chromosome | CDS | 1066782 | 618 | - | 0.532362 |
| NA | NE0254 | Integrase, catalytic core | SubName: Full=Integrase, catalytic core; | chromosome | CDS | 289300 | 1044 | - | 0.478927 |
| NA | NE0934 | Integrase, catalytic core | SubName: Full=Integrase, catalytic core; | chromosome | CDS | 1021050 | 309 | - | 0.440129 |
| NA | NE1585 | Transposase IS4 family | SubName: Full=Transposase IS4 family; | chromosome | CDS | 1714952 | 576 | - | 0.505208 |
| NA | NE1815 | Transposase IS911 HTH and LZ region | SubName: Full=Transposase IS911 HTH and LZ region; | chromosome | CDS | 1965060 | 324 | + | 0.512346 |
| NA | NE1178 | Integrase, catalytic core | SubName: Full=Integrase, catalytic core; | chromosome | CDS | 1277247 | 1044 | - | 0.478927 |
| NA | NE1560 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1694061 | 504 | + | 0.529762 |
| NA | NE1378 | Integrase, catalytic core | SubName: Full=Integrase, catalytic core; | chromosome | CDS | 1499301 | 1044 | - | 0.478927 |
| NA | NE0257 | Site-specific recombinase | SubName: Full=Site-specific recombinase; | chromosome | CDS | 293167 | 633 | - | 0.511848 |
| NA | NE2101 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 2289108 | 213 | + | 0.469484 |
| NA | NE2155 | Integrase, catalytic core | SubName: Full=Integrase, catalytic core; | chromosome | CDS | 2339500 | 852 | - | 0.539906 |
| NA | NE2010 | possible transposase | SubName: Full=Possible transposase; | chromosome | CDS | 2172449 | 408 | + | 0.5 |
| NA | NE1630 | possible transposase | SubName: Full=Possible transposase; | chromosome | CDS | 1762568 | 408 | + | 0.504902 |
| NA | NE0231 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 263808 | 630 | - | 0.549206 |
| NA | NE0714 | Integrase, catalytic core | SubName: Full=Integrase, catalytic core; | chromosome | CDS | 771266 | 903 | + | 0.530454 |
| NA | NE1884 | possible homolog of eukaryotic DNA ligase III | SubName: Full=Possible homolog of eukaryotic DNA ligase III; | chromosome | CDS | 2035978 | 699 | + | 0.547926 |
| NA | NE2274 | Transposase IS4 family | SubName: Full=Transposase IS4 family; | chromosome | CDS | 2463468 | 576 | + | 0.506944 |
| NA | NE0844 | Protein of unknown function DUF48 | SubName: Full=Uncharacterized protein; | chromosome | CDS | 919923 | 627 | + | 0.494418 |
| NA | NE0121 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 149114 | 717 | - | 0.543933 |
| NA | NE0253 | Integrase, catalytic core | SubName: Full=Integrase, catalytic core; | chromosome | CDS | 288134 | 852 | + | 0.539906 |
| NA | NE2200 | transposase | SubName: Full=Transposase; | chromosome | CDS | 2390793 | 369 | + | 0.525745 |
| NA | NE1270 | Transposase IS911 HTH and LZ region | SubName: Full=Transposase IS911 HTH and LZ region; | chromosome | CDS | 1388563 | 324 | + | 0.512346 |
| NA | NE1539 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1675495 | 1722 | + | 0.526132 |
| NA | NE0342 | possible transposase | SubName: Full=Possible transposase; | chromosome | CDS | 381289 | 438 | - | 0.511416 |
| NA | NE1740 | Transposase IS4 family | SubName: Full=Transposase IS4 family; | chromosome | CDS | 1875853 | 879 | - | 0.513083 |
| NA | NE2498 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 2729205 | 807 | - | 0.491945 |
| NA | NE2096 | Transposase IS911 HTH and LZ region | SubName: Full=Transposase IS911 HTH and LZ region; | chromosome | CDS | 2283635 | 324 | + | 0.512346 |
| NA | NE2441 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 2665658 | 342 | + | 0.418129 |
| NA | NE0454 | Integrase, catalytic core | SubName: Full=Integrase, catalytic core; | chromosome | CDS | 494466 | 951 | + | 0.520505 |
| NA | NE1996 | Transposase IS911 HTH and LZ region | SubName: Full=Transposase IS911 HTH and LZ region; | chromosome | CDS | 2156445 | 324 | - | 0.512346 |
| NA | NE2521 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 2754684 | 1410 | + | 0.616312 |
| NA | NE2515 | Integrase, catalytic core | SubName: Full=Integrase, catalytic core; | chromosome | CDS | 2748517 | 852 | - | 0.539906 |
| NA | NE1174 | Uncharacterized protein family UPF0020 | SubName: Full=Uncharacterized protein family UPF0020; | chromosome | CDS | 1274051 | 1188 | + | 0.559764 |
| NA | NE0259 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 294413 | 798 | - | 0.5 |
| NA | NE1521 | possible transposase | SubName: Full=Possible transposase; | chromosome | CDS | 1653402 | 474 | + | 0.49789 |
| NA | NE2232 | Integrase, catalytic core | SubName: Full=Integrase, catalytic core; | chromosome | CDS | 2418813 | 1044 | - | 0.478927 |
| NA | NE1845 | Integrase, catalytic core | SubName: Full=Integrase, catalytic core; | chromosome | CDS | 1992108 | 1044 | + | 0.478927 |
| NA | NE0340 | Integrase, catalytic core | SubName: Full=Integrase, catalytic core; | chromosome | CDS | 379941 | 951 | - | 0.521556 |
| ccrB | NE0236 | Site-specific recombinase | SubName: Full=Site-specific recombinase; | chromosome | CDS | 270335 | 1560 | - | 0.50641 |
| dnaA | NE0001 | dnaA; chromosomal replication initiator protein | RecName: Full=Chromosomal replication initiator protein DnaA; | chromosome | CDS | 211 | 1380 | + | 0.488406 |
| dnaB | NE0194 | dnaB; replicative DNA helicase protein | SubName: Full=DnaB replicative DNA helicase protein; EC=3.6.1.-; | chromosome | CDS | 232072 | 1398 | - | 0.512876 |
| dnaE1 | NE1978 | dnaE1; DNA polymerase III (alpha chain) protein | SubName: Full=DnaE1 DNA polymerase III (Alpha chain) protein; EC=2.7.7.7; | chromosome | CDS | 2136454 | 3510 | - | 0.54302 |
| dnaN | NE0002 | DNA polymerase III, beta chain | RecName: Full=DNA polymerase III subunit beta; EC=2.7.7.7; | chromosome | CDS | 1791 | 1122 | + | 0.486631 |
| dnaQ | NE0141 | probable DNA polymerase III (epsilon chain) protein | SubName: Full=Probable DNA polymerase III (Epsilon chain) protein; EC=2.7.7.7; | chromosome | CDS | 166020 | 699 | + | 0.516452 |
| dnaX | NE0433 | dnaX; DNA polymerase III (subunits tau and gamma) protein | SubName: Full=DnaX DNA polymerase III (Subunits tau and gamma) protein; EC=2.7.7.7; | chromosome | CDS | 470671 | 1578 | + | 0.512041 |
| fis | NE0875 | probable factor-for-inversion-stimulation transcription regulator protein | SubName: Full=Probable factor-for-inversion-stimulation transcription regulator protein; | chromosome | CDS | 954360 | 243 | + | 0.444444 |
| gyrA | NE0332 | DNA gyrase/topoisomerase IV, subunit A | RecName: Full=DNA gyrase subunit A; EC=5.99.1.3; | chromosome | CDS | 370118 | 2547 | + | 0.513153 |
| gyrB | NE0003 | DNA gyrase, subunit B:DNA topoisomerase II gyrB | RecName: Full=DNA gyrase subunit B; EC=5.99.1.3; | chromosome | CDS | 2961 | 2430 | + | 0.497119 |
| holA | NE1137 | putative DNA polymerase III (delta subunit) protein | SubName: Full=Putative DNA polymerase III (Delta subunit) protein; EC=2.7.7.7; | chromosome | CDS | 1232727 | 1071 | - | 0.496732 |
| holB | NE2180 | putative DNA polymerase III (delta' subunit) protein | SubName: Full=Putative DNA polymerase III (Delta subunit) protein; EC=2.7.7.7; | chromosome | CDS | 2368779 | 1062 | - | 0.560264 |
| holC | NE0442 | putative DNA polymerase III (chi subunit) protein | SubName: Full=Putative DNA polymerase III (Chi subunit) protein; EC=2.7.7.7; | chromosome | CDS | 481428 | 390 | + | 0.530769 |
| hrpA | NE0833 | HrpA-like helicases | SubName: Full=HrpA-like helicases; EC=3.-.-.-; | chromosome | CDS | 905417 | 3756 | + | 0.537007 |
| hupB | NE2207 | Bacterial histone-like DNA-binding protein | SubName: Full=Bacterial histone-like DNA-binding protein; | chromosome | CDS | 2396895 | 273 | - | 0.498168 |
| ihfA | NE0952 | Bacterial histone-like DNA-binding protein | RecName: Full=Integration host factor subunit alpha; Short=IHF-alpha; | chromosome | CDS | 1037078 | 309 | - | 0.430421 |
| ihfB | NE1961 | Bacterial histone-like DNA-binding protein | RecName: Full=Integration host factor subunit beta; Short=IHF-beta; | chromosome | CDS | 2116967 | 318 | - | 0.490566 |
| int | NE0450 | Phage integrase | SubName: Full=Phage integrase; | chromosome | CDS | 490875 | 879 | - | 0.492605 |
| intF | NE0235 | Phage integrase | SubName: Full=Phage integrase; | chromosome | CDS | 268953 | 1251 | - | 0.552358 |
| intINeu | NE2189 | Integron integrase; Phage integrase; Phage integrase N-terminal SAM-like domain | SubName: Full=Integron integrase Phage integrase Phage integrase N-terminal SAM-like domain; | chromosome | CDS | 2376658 | 972 | - | 0.5 |
| lig | NE1753 | NAD-dependent DNA ligase | RecName: Full=DNA ligase; EC=6.5.1.2; AltName: Full=Polydeoxyribonucleotide synthase [NAD(+)]; | chromosome | CDS | 1890487 | 2046 | + | 0.540078 |
| mfd | NE0008 | mfd: transcription-repair coupling factor | RecName: Full=Transcription-repair-coupling factor; Short=TRCF; EC=3.6.4.-; | chromosome | CDS | 8100 | 3465 | - | 0.531313 |
| mutL | NE1742 | mutL; DNA mismatch repair protein | RecName: Full=DNA mismatch repair protein MutL; | chromosome | CDS | 1877222 | 1815 | - | 0.536088 |
| mutM,fpg | NE2552 | Formamidopyrimidine-DNA glycolase | RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; EC=3.2.2.23; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase MutM; Short=AP lyase MutM; EC=4.2.99.18; | chromosome | CDS | 2790763 | 816 | + | 0.544118 |
| mutS | NE1705 | mutS; DNA mismatch repair protein | RecName: Full=DNA mismatch repair protein MutS; | chromosome | CDS | 1839274 | 2622 | + | 0.55225 |
| mutY | NE0056 | HhH-GPD | SubName: Full=HhH-GPD; EC=3.2.2.-; | chromosome | CDS | 77027 | 1134 | + | 0.503527 |
| nth | NE2223 | HhH-GPD:Iron-sulfur cluster loop (FCL) | RecName: Full=Endonuclease III; EC=4.2.99.18; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase; | chromosome | CDS | 2410645 | 672 | + | 0.513393 |
| ntpA | NE2253 | NUDIX hydrolase | SubName: Full=NUDIX hydrolase; EC=3.6.1.-; | chromosome | CDS | 2444258 | 459 | + | 0.51634 |
| ogt | NE0885 | Methylated-DNA--protein-cysteinemethyltransferase | SubName: Full=Methylated-DNA--protein-cysteine methyltransferase; EC=2.1.1.63; | chromosome | CDS | 967127 | 492 | - | 0.48374 |
| polA | NE1468 | polA; DNA polymerase I protein | SubName: Full=PolA DNA polymerase I protein; EC=2.7.7.7; | chromosome | CDS | 1601478 | 2739 | - | 0.512961 |
| priA | NE1505 | probable priA; primosomal protein N' (replication factor Y) | SubName: Full=Probable priA primosomal protein N (Replication factor Y); | chromosome | CDS | 1637569 | 2193 | + | 0.536252 |
| radC | NE1464 | DNA repair protein radC family | RecName: Full=UPF0758 protein NE1464; | chromosome | CDS | 1598891 | 675 | + | 0.493333 |
| rdgC | NE0507 | putative recombination associated protein rdgC | SubName: Full=Putative recombination associated protein rdgC; | chromosome | CDS | 545683 | 885 | + | 0.514124 |
| recA | NE1932 | RecA bacterial DNA recombination protein:AAA ATPase superfamily | RecName: Full=Protein RecA; AltName: Full=Recombinase A; | chromosome | CDS | 2087356 | 1032 | - | 0.516473 |
| recG | NE1850 | RecG-like helicases | SubName: Full=RecG-like helicases; EC=3.6.1.-; | chromosome | CDS | 1997828 | 2058 | - | 0.556851 |
| recJ | NE0010 | recJ: single-stranded-DNA-specific exonuclease | SubName: Full=RecJ: single-stranded-DNA-specific exonuclease; EC=3.1.-.-; | chromosome | CDS | 12864 | 1764 | - | 0.537982 |
| recN | NE1479 | ABC transporter:DNA repair protein RecN | RecName: Full=DNA repair protein RecN; AltName: Full=Recombination protein N; | chromosome | CDS | 1614853 | 1686 | + | 0.506524 |
| recQ | NE2564 | ATP-dependent DNA helicase RecQ | SubName: Full=ATP-dependent DNA helicase RecQ; EC=3.6.1.-; | chromosome | CDS | 2802439 | 1650 | - | 0.550303 |
| rhlE | NE2040 | rhlE; ATP-dependent RNA helicase RhlE | SubName: Full=RhlE ATP-dependent RNA helicase RhlE; | chromosome | CDS | 2209232 | 1497 | - | 0.504342 |
| rnhA | NE0140 | probable ribonuclease hi protein | RecName: Full=Ribonuclease H; Short=RNase H; EC=3.1.26.4; | chromosome | CDS | 165523 | 486 | + | 0.522634 |
| rnhB | NE1707 | Ribonuclease HII and HIII | RecName: Full=Ribonuclease HII; Short=RNase HII; EC=3.1.26.4; | chromosome | CDS | 1842393 | 654 | - | 0.530581 |
| ruvA | NE0212 | probable Holliday junction DNA helicase subunit | RecName: Full=Holliday junction ATP-dependent DNA helicase RuvA; EC=3.6.4.12; | chromosome | CDS | 247313 | 588 | + | 0.498299 |
| ruvB | NE0213 | ruvB; holliday junction DNA helicase protein | RecName: Full=Holliday junction ATP-dependent DNA helicase RuvB; EC=3.6.4.12; | chromosome | CDS | 247919 | 1041 | + | 0.526417 |
| ruvC | NE0211 | Crossover junction endodeoxyribonuclease RuvC | RecName: Full=Crossover junction endodeoxyribonuclease RuvC; EC=3.1.22.4; AltName: Full=Holliday junction nuclease RuvC; AltName: Full=Holliday junction resolvase RuvC; | chromosome | CDS | 246771 | 546 | + | 0.520147 |
| sbcB | NE0671 | exodeoxyribonuclease I | SubName: Full=Exodeoxyribonuclease I; EC=3.1.11.1; | chromosome | CDS | 729551 | 1491 | + | 0.53387 |
| sbcC | NE1392 | ATP/GTP-binding site motif A (P-loop):ABC transporter | SubName: Full=ATP/GTP-binding site motif A (P-loop):ABC transporter; | chromosome | CDS | 1520301 | 3264 | + | 0.530944 |
| sbcD | NE1390 | Serine/threonine specific protein phosphatase:Exonuclease SbcD | SubName: Full=Serine/threonine specific protein phosphatase:Exonuclease SbcD; | chromosome | CDS | 1517676 | 1242 | + | 0.528986 |
| smf | NE1968 | SMF family | SubName: Full=SMF family; | chromosome | CDS | 2125084 | 1116 | - | 0.544803 |
| ssb | NE2453 | Single-strand binding protein family | RecName: Full=Single-stranded DNA-binding protein; Short=SSB; | chromosome | CDS | 2677195 | 450 | - | 0.52 |
| sss | NE0338 | Phage integrase:Phage integrase N-terminal SAM-like domain | RecName: Full=Tyrosine recombinase XerC; | chromosome | CDS | 378223 | 966 | - | 0.561077 |
| tISRso8a | NE0154 | Transposase IS911 HTH and LZ region | SubName: Full=Transposase IS911 HTH and LZ region; | chromosome | CDS | 178919 | 303 | + | 0.584158 |
| tnpA | NE0835 | Transposase Tn3 family | SubName: Full=Transposase Tn3 family; | chromosome | CDS | 911376 | 2970 | - | 0.62963 |
| tnpR | NE0836 | Site-specific recombinase | SubName: Full=Site-specific recombinase; | chromosome | CDS | 914348 | 561 | - | 0.613191 |
| tnpR | NE0751 | Site-specific recombinase | SubName: Full=Site-specific recombinase; | chromosome | CDS | 813230 | 561 | + | 0.502674 |
| topB | NE1966 | topB; DNA topoisomerase III protein | RecName: Full=DNA topoisomerase; EC=5.99.1.2; | chromosome | CDS | 2121919 | 2499 | - | 0.4994 |
| uvrA1 | NE2455 | ABC transporter:Excinuclease ABC A subunit | RecName: Full=UvrABC system protein A; Short=UvrA protein; AltName: Full=Excinuclease ABC subunit A; | chromosome | CDS | 2679119 | 2832 | + | 0.545904 |
| uvrB | NE0785 | Helicase subunit of the DNA excision repair complex | RecName: Full=UvrABC system protein B; Short=Protein UvrB; AltName: Full=Excinuclease ABC subunit B; | chromosome | CDS | 851792 | 2088 | - | 0.493774 |
| uvrC | NE0933 | uvrC Nuclease subunit of the excinuclease complex | RecName: Full=UvrABC system protein C; Short=Protein UvrC; AltName: Full=Excinuclease ABC subunit C; | chromosome | CDS | 1018826 | 1815 | + | 0.534986 |
| uvrD | NE1473 | UvrD/REP helicase | SubName: Full=UvrD/REP helicase; EC=3.6.1.-; | chromosome | CDS | 1607429 | 2235 | - | 0.514541 |
| xerD | NE1458 | Phage integrase:Phage integrase N-terminal SAM-like domain | RecName: Full=Tyrosine recombinase XerD; | chromosome | CDS | 1593227 | 957 | - | 0.519331 |
| xseA | NE1172 | xseA; exodeoxyribonuclease vII large subunit protein | RecName: Full=Exodeoxyribonuclease 7 large subunit; EC=3.1.11.6; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit; | chromosome | CDS | 1272075 | 1347 | + | 0.544172 |
| xseB | NE1159 | Exonuclease VII, small subunit | RecName: Full=Exodeoxyribonuclease 7 small subunit; EC=3.1.11.6; AltName: Full=Exodeoxyribonuclease VII small subunit; Short=Exonuclease VII small subunit; | chromosome | CDS | 1258933 | 270 | + | 0.444444 |
| xthA1 | NE0023 | Exodeoxyribonuclease III:Exodeoxyribonuclease III xth | SubName: Full=Exodeoxyribonuclease III:Exodeoxyribonuclease III xth; EC=3.1.11.2; | chromosome | CDS | 30420 | 765 | - | 0.490196 |
| xthA2 | NE2192 | Exodeoxyribonuclease III:Exodeoxyribonuclease III xth | SubName: Full=Exodeoxyribonuclease III:Exodeoxyribonuclease III xth; EC=3.1.11.2; | chromosome | CDS | 2381666 | 774 | - | 0.514212 |
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