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# Neisseria meningitidis MC58, MC58

>NMB0727 N-6 adenine-specific DNA methylase
MITISNEDNMILMSRYPDKYFDLAIVDPPYGILNKTKRGGDYKFNMNEYS
QWDIKPDQTYFNELFRVSKNQIIWGGNYFGELWLRSEYNKGFIIWDKNQP
ETLNNFSMAEMAWSSFDRPSKIFRFSVRKNRNKTHPTQKPVELYQWLLKM
YAKQGDKILDTHLGSGTLAIACCIAQFDLTACEINSDYYQQSIEKIKNNL
PEARISFGHPGYCIIE
>NMB1417 conserved hypothetical protein
MTTILAFDIETVPDVQGIRTLYELPSSLPDDEVVLFAQQKRRAQTGGDFM
QHHLHQVVAISCCMRWGQDKVHVGTIGEMDDGEEVVIAKFFELIEKHTPQ
LVSWNGGGFDLPVLHYRSLIYGINAARYWDMGDGDFGDSRDFKWNNYISR
YHQRHCDLMDLLALYQPRANVPLDDMAKLCGFPGKLGMDGSKVWEAFHTG
RLKEIRNYCETDAANTYLMYLRFCLVSGRLDADEYEMEIKRMRNYLSAQA
GEKPHWEEFVRAWE
>NMB0141 transposase, truncation
MIAKHIDRFPLLKLDRVIDWQPIEQYLNRQRTRYLRDHRGRPAYPLLSMF
KAVLLGQWHSLSDPELEHSLITRIDFNLFCRFDELSIPDYSHQPYSGLSE
KDAYAVMTGYRPVKRVRPYAV
>NMB0400 transposase, truncated
MPYYLYCLRLRRLVLIFVNPLYLHQFHETQVGSVKQLIAHFDRLIDELDK
QIDDHTHTHFDGKAQVAEQIKGIGSITTATLMAMLPELRRLSHKRIAGLA
GIAPHPRESGETKFKSRCFGGRSAVRKALYMATVAATRFEPLIRDFHQRP
LSEGKPYKVAVTACMRKLLTISNARMRDYFAENDTAENGI
>NMB0507 hypothetical protein
MKKDIFYCEQWSYGYKKLHKPFSEKQAEEKHLKGELYTAVIGSATQPEYV
ITLREEVGFFSVHFFDKFGRDYLTHQFQKYSNSNYYFLSMAVWRDYITLE
SHDLAEGYTYFFNENTDDCYVLKEDFINNERYEKTELYSQKDKVILFPKF
GEYDLVLNPDII
>NMB0698 hypothetical protein
MLFEGLPCLAVWCKNRLSAVLPVGGLNVSENLLEIETHPFDPVLPPKAAV
MMMGTFPPKEDKRAMQFHYPNFQNDMWRVYGLVFFNDAAHFQRLSEKAFD
AEKIKAFLHERGIASCPTVLKAVRQHGNASDKFLKVVETVDLAAVLAKIP
ECRHICTTGGKATEILLDIQGGGIKMPKTGETVPFPFAGRDLTLTRLPST
SRAYPLSLAKKAAAYRAFFEMAGLCEKQL
>NMB0826 C-5 cytosine-specific DNA methylase
MTISTMAQTHDTRLQKTLLFPSQQGWKSKTFLKPDSHIRLATVFSGIGAV
EQAFHRLNLNHTIVFSGDIDPYVKKSYLGNYKLNEDFWHNDITQFDARKF
RNQVDILVGGSPCQAFSMVGKRAGLEDTRGTLFYEFARVVDEVQPKIFIY
ENVKGLLNHDNGKTWKVVKSVFYSLGYDLYFQIMNSKDYGIPQHRERIFV
VGFHTPPINGFQFPEKIELEHTMQDFLEDYTDSKYFLREKGAKFVTSSKN
RQKRYTQINGEIALCQKANQQFNWHGDFIFQAARESEFDDFIFDVNNVEE
KYYLSEKIKNYVLAGGTKNFKTSTETDLPVARPLLQTMHKMHRAGVDNYV
THNRGRIRKLTPRECLRLMGFRDDFKILVSDTQMYRQAGNSIVVDVLIAI
LKQMDITLYGE
>NMB1076 DnaA-related protein
MNQLIFDFAAHDYPSFDKFLGTENAELVYVLRHKHGQFIYVWGEEGAGKS
HLLQAWVAQALEAGKNAAYIDAASMPLTDAAFEAEYLAVDQVEKLGNEEQ
ALLFSIFNRFRNSGKGFLLLGSEYTPQQLVIREDLRTRMAYCLVYEVKPL
TDQEKIDALASMAAARQVTVDSEIFEYLLKHWRRDMDSLMMMLDTLDNYA
VTMGKRITLPLLRQLLKQQETQ
>NMB0991 IS1106 transposase
MSTFFRQTAQAMIAKHINRFPLLKLDQVIDWQPIEQYLNRQKTRYLRDHR
GRPAYPLLSMFKAVLLGQWHSLSDPELEHSLITRIDFNLFCRFDELSIPD
YSTLCRYRNWLAQDDTLSELLELINCQLTEKGLKVEKASAAVIDATIIQT
AGSEQRQAIEVDEEGQISGQTTPSKDSDARWIKKNGLYKLGYKQHTRTDA
EGYIEKLHITPANAHECKHLSPLLEGLPEGTTVYADKGYDSAENRQHLEE
HQLLDGIMSKACRNRPLSEVQTKRNRYLSKTRYSGLNLNQDKATKPQTVQ
IVRQGEATPYWFKFNPLYVVEQSFGTLHRKFRYARAAYFGLIKVSAQSHL
KAMCLNLLKAANRLSAPAAA
>NMB1064 conserved hypothetical protein
MDLREVKLGGETIYEGGFVSISRDKVRLPNGNEGQRIVIRHPGAACVLAV
TDEGKVVLVRQWRYAANQATLELPAGKLDVAGEDMAACALRELAEETPYT
ADSVRLLYSFYTAVGFCNEKMYLFEAEGVRLGSTLANDEDEITETVLMSK
EEVRQALANDEIKDGKTLIGLQYWLMKD
>NMB0494 DNA helicase, truncation
MNDYTAMPSEDGGIGSLSLPPHSMEAEQSVLGGLMLENPAWDRIADVVSG
EDFYRHEHRLIFRSIAKLINESRPADVITVQEDLQRNEELEAAGGFEYLI
TLAQNTPSAANIRRHAEIVRERSIMRQLAEVGTEIARSAIPKISAAERAV
AWSTKNSSSFF
>NMB1543 conserved hypothetical protein
MSEVEYFSHFISDGKGKLLEIPQRRGKQDGVFVDWISFTFHEDTLLKVSG
CPLFSDAEYMYVLSRKLEEILGFGITRKCKSRGNKFYESMYRLGSDDVDY
GEVHFGGQRNTVLVELKGTGCSVASPGWELRLKQFLDDSIRTRITRIDLA
LDFFDGEYTPDQALLDHDNGFFDNSNQRPKSETIGTAWRNEDGSGKTFYV
GRKKNSRFVRVYEKGRQLGDKESKWVRFEIQFNYGDIEIPLDILINQGSY
FCGAFPICRKFKNMPVPERFDQRKKKLNLTFEHKLHYAKNAVGKLVNFMI
EMGFDNSEIVESLKADSGFPKGLEPEKYALEMLRDGLKHGFIHEQPDIDL
EIELDELGVIAFKNSDKFDREKRLFSPDYDVEKERKYQEYLSKVYHQNVD
YDYF
>NMB0919 putative IS1106 transposase
MSTFFQQTAQAMIAKHIDRFPLLKLDQVIDWQPIEQYLNRQKTRYLRDHR
GRPACPLLSMFKAVLLGQWHNLSDPELEHSLITRIDFNLFCRFDELSIPD
YSTLCRYRNRLAQDDTLSELLELINRQLTEKGLKVEKASAAVVDATIIQT
VGSKQRQAIEVDEEGQVSGQTTLSKDKNARWTKKNSLYKLGYKQHTRTDA
EGYIEKLHITPANAHECKHLSPLLEGLPEGTTIYADKGYDSAENRQHLEE
HQLQDGIMRKACRNRPLTETQTKRNRYLSKTRYVVEQSFGTLHRKFRYAR
AAYFGLICARCRLKGSPDA
>NMB1401 IS1016C2 transposase
MKITHCKLKKKVQKELLRFFVLEVTARSAADILGIHPNSAVLFYRKIRMV
ISHYLALAANEVFEGSVELDESYFGGRRKGKRGRGAAGKVVVFGILKRNG
RVYTVVVDNAKSDTLMPVIKQKIMPDSIVYTDSLSSYDKLDVSGFIHYRI
NHSKEFADRQNHINGIENFWNQAKRVLRK
>NMB1368 putative ATP-dependent RNA helicase
MSIKFADLNLDKNILSAVSSEGYESPTPIQAQAIPFALEGRDIMASAQTG
SGKTAAFLLPTLQKLTKRSEKPGKGPRALVLTPTRELAAQVEKNALAYAK
NMRWFRTVSIVGGASFGYQTRALSKPVDLIVATPGRLMDLMQSGKVDFER
LEVLILDEADRMLDMGFIDDIETIVEATPSDRQTLLFSATWDGAVGKLAR
KLTKDPEIIEVERVDDQGKIEEQLLYCDDMRHKNRLLDHILRDANIDQCV
IFTSTKAMTEVIADELYEKGFAANCLHGDMPQGWRNRTLMDLRKGRCKIL
VATDVAARGIDVPTITHVINYDLPKQAEDYVHRIGRTGRAGRTGIAITFA
EVNEYVKVHKIEKYINRKLPELTIEGMEPTRKRKSAGGKPKGKGGWGDRK
SGGWRGDHKPSKEGFGGKTRGEGFKKEGFKRDGFKKTGEGFKGKRKAGDS
FAGKGERRYKDR
>NMB0443 transposase, IS30 family
MSYTQLTQGERYHIQYLSRHCTVTEIAKQLNRHKSTISREIRRHRTQGQQ
YSAEKAQRQSQTIKQRKRQPYKLDSQLIQHIDPLIRRKLSPEQVCAYLRK
HHQITLHHSTIYRYLRQDKSNGSTLWQHLRICSKPYRKRYGSTWTRGKVP
NRVGIENRPAIVDQKSRIGDWEADTIVGKGQKSALLTLVERVTRYTIICK
LDSLKAEDTARAAVRALKAHKDRVHTITMDNGKEFYQHTKITKALKAETY
FCRPYHSWEKGLNENTNGLIRQYFPKQTDFRNISDREIRRVQDELNHRPR
KTLGYETPSVLFLNLFQPLIH
>NMB1510 thermonuclease family protein
MFRRHRHLKNMQIKKIMKWLPVALSLLGALGYTGYGSEAVRTAVAVLDVL
GAAGDAGSDAPARRRASAKSGHRYTGTVSKVYDGDTLHVIDGDGAKHKIR
MAYIDAPEMKQAYGTRSRDNLRAAAEGRKVSVRVFDTDRYQREVAQVSVG
KTDLNLMQVQDGAAWHYKSYAKEQQDKADFADYADAQIQAERERKGLWKA
KNPQAPWAYRRAGRSGGGNKDWMDAVGEWLGIW
>NMB0077 site-specific DNA methylase, truncation
MKMNKQYPKINYIGNKEKIASWICDQLPSDVDTVADVFSGGCSFAYEAKK
RGYRVITNDILAINYQIALALIENNHETLNDDDVAMIFSGSPHAGFMSQR
YAEKFYFHDEYQQLDL
>NMB0248 conserved hypothetical protein
MANGKNGTLYIGVTMNLPERVWQHKNHVNIDGFTARYDVHDLVWYQFFEN
MPEAVAKEKTMKKWRREWKIKLIEEQNTE
>NMB1683 MutT/nudix family protein
MLDREGYRPNVGIILINNRNEVFWGKRVREHSWQFPQGGIKPGESPETAM
YRELYEEVGLLPQHVKIIGRTRDWLRYDVPNNWVRREWRGSYRGQKQIWY
LLRLTGRDCDVNLRATRHPEFDGWRWHQYWAPVDEVIDFKRDVYLGALKE
LSSRFLRGMESYEDFAARQSSDNR
>NMB1770 transposase, IS30 family
MSYTQLTQGERYHIQYLSRHCTVTEIAKQLNRHKSTISREIRRHRTQGQQ
YSAEKAQRQSRTIKQRKRQPYKLDSQLIQHIDTLIRRKLSPEQVCAYLCK
HHRITLHHSTIYRYLRQDKSNGSTLWQHLRICSKPYRKRYGSTWTRGKVP
NRVGIENRPAIVDQKSRIGDWEADTIVGKGQKSALLTLVERVTRYTIICK
LDSLKAEDTARAAVRALKAHKDRVHTITMDNGKEFYQHTKITKALKAETY
FCRPYHSWEKGLNENTNGLIRQYFPKQTDFRNISDREIRRVQDELNHRPR
KTLGYETPSVLFLNLFQPLIH
>NMB1251 transposase, IS30 family
MSYTQLTQGERYHIQYLSRHCTVTEIAKQLNRHKSTISREIRRHRTQGQQ
YSAEKAQRQSRTIKQRKRQPYKLDSQLIQHIDPFIRRKLSPEQVCAYLCK
HHQITLHHSTIYRYLRQDKSNGSTLWQHLRICSKPYRKRYGSTWTRGKVP
NRVGIENRPAIVDQKSRIGDWEADTIVGKGQKSALLTLVERVTRYTIICK
LDSLKAEDTARAAVRALKAHKDRVHTITMDNGKEFYQHTKITKALKAETY
FCRPYHSWEKGLNENTNGLIRQYFPKQTDFRNISDREIRRVQDELNHRPR
KTLGYETPSVLFLNLFQPLIH
>NMB1713 transposase, IS30 family
MSYTQLTQGERYHIQYLSRHCTVTEIAKQLNRHKSTISREIRRHRTQGQQ
YSAEKAQRQSRTIKQRKRQPYKLDSQLIQHIDTLIRRKLSPEQVCAYLCK
HHRITLHHSTIYRYLRQDKSNGSTLWQHLRICSKPYRKRYGSTWTRGKVP
NRVGIENRPAIVDQKSRIGDWEADTIVGKGQKSALLTLVERVTRYTIICK
LDSLKAEDTARAAVRALKAHKDRVHTITMDNGKEFYQHTKITKALKAETY
FCRPYHSWEKGLNENTNGLIRQYFPKQTDFRNISDREIRRVQDELNHRPR
KTLGYETPSVLFLNLFQPLIH
>NMB2041 thiamin pyrophosphokinase-related protein
MPTVRFTESVSKQDLDALFEWAKASYGAESCWKTLYLNGLPLGNLSPEWV
ERVKKDWEAGCSESSDGIFLNADGWPDMGGRLQHLALGWHCAGLLDGWRN
ECFDLTDGGGNPLFTLERAAFRPFGLLSRAVHLNGLTESDGRWHFWIGRR
SPHKAVDPNKLDNTAAGGVSGGEMPSEAVCRESSEEAGLDKTLLPLIRPV
SQLHSLRSVSRGVHNEILYVFDAVLPETFLPENQDGEVAGFEKMDIGGLL
DAMLSGNMMHDAQLVTLDAFCRYGLIDAAHPLSEWLDGIRL
>NMB1528 putative methylated-DNA--protein-cysteine methyltransferase
MAKIGDFAVKSMIGIRSKQMITLPSLNNLPSKWDEIRHWLESRVFECGVM
PHPNLTECEAKQFERDFWDNIGCAPEEYVRIRRAIRLLEARYPDSLNELV
CAAIATPLGEMLAVFGSRGLCLLEFVGQKHLEQEIAAVQKALRGRFVFRE
DERTQLLRQELDLYFKGRLKTFATPLEQIGTEFQKQAWDALLAIPYGETR
SYKEQAQRLGNPKAVRAVAAANGQNKVSILIPCHRVIGSDGKLTGYAGGL
NRKQFLLALEHGEVQTALF
>NMB1873 putative DNA polymerase, bacteriophage-type
MLSARYLHLHEALGLGPMWLKQAAAVLPPKNTPAPSAQARPQTVRAAPIR
PSQPHNGQARLETMKALETAAVPTRKPAPETETPLPGLSDGIAPVPAASG
ITKLAVVSLCPPIEDAVYGQLFHGKAGILLDNILKAVGLDAAYVHKTCWV
KTAAVGNPMPSEQAVANALGQIARELDGCRAPAVLFLGQAFVQPERQTMI
ETLCGSRPFFIIDHPARLLRQPELKARAWQVLKQLKRALRQGGGS
>NMB0805 transposase, IS30 family
MSHTQLTQGERYHIQYLSRHCTVTEIAKQLNRHKSTISREIRRHRTQGQQ
YSAEKAQRQSRTIKQRKRQPYKLDSQLIQHIDPLIRRKLSPEQVCAYLCK
HHQITLHHSTIYRYLRQDKSNGSTLWQHLRICSKPYRKRYGSTWTRGKVP
NRVGIENRPAIVDQKSRIGDWEADTIVGKGQKSALLTLVERVTRYTIICK
LDSLKAEDTARAAVRALKAHKDRVHTITMDNGKEFYQHTKITKALKAETY
FCRPYHSWEKGLNENTNGLIRQYFPKQTDFRNISDREIRRVQDELNHRPR
KTLGYETPSVLFLNLFQPLIH
>NMB1568 putative DNA polymerase holoenzyme chi subunit
MPKATFYTHVAQVPIFTCRLIARAIRDGGRILVWSDSFGQLQELDKMLWQ
YEAESFIPHEIWETEEAMPSEPSVLLACGGNLPRIPEGMTVLNLSDGFWN
TAPVLPARVLEIVGNSLEELADARERFTAYRRSGFAIEHHGMEGKA
>NMB1290 C-5 cytosine-specific DNA-methylase
MKNKIQNQLDNIVTLNNEKFTFIDLFAGIGGFRIAMENVGGRCVFSSEWD
DKARQTYQVNFNDIPYGDITLKETKAAIPSKFDVLTAGFPCQPFSIAGVS
KKKSLGRETGFLDKAQGTLFFDVAEIIGKHRPKIFLLENVKNLVSHDKGN
TFKVIKGTLEELDYQIFYQVMNAKYYVPQNRERIFIVGFDRQYFNKEINF
NFPSPPESQPKLKQILEDDVDNSFTLSDNLWLYLQNYAKKHKAKGNGFGF
GLVDLDGISRTLSARYYKDGSEILIPQKGKNPRKLTPRECSRLMGFPKDF
VIDAVSKTAAYKQFGNSIAVPLVQAIAKQIINELKNE
>NMB0455 conserved hypothetical protein
MNTLYTLFATCPRGLETVLSQELESLGCTDVQVFDGGVSCRGGLEQVYAA
NLHSRTASRILLRLTKGTYRNERDIYKLAKNINWFNWFTLQQTFKVKVEA
KRANVKSIQFVGLTVKDAVCDAFRDIYDARPSVDKAAPDVRIHAFLNERN
VEIFIDTSGEALFKRGYRLDTGEAPLRENLAAGLLLSAGYDGTQPFQDPF
CGSGTIAIEAAWIAARRAPGMMRRFGFEKLQNFDKTLWSDLRRRAEAQTR
PVRAPIAGSDNDRRIVQTALDNARRAGVDDIVSFSVADAQSVRPNGENGI
MVSNPPYGVRLEEVRALQALYPQLGTWLKKHYAGWLAAMFTGDREMPKFM
CLSPKRKIPLYNGNIDCRLFLIDMVEGSNR
>NMB0057 hypothetical protein
MSVMAGRHPYGVRSGLRRNGLKLWDIHFRMTRFIVARCGLLFATLKGKTM
KKMFVLFCMLFSCAFSLAAVNINAASQQELEALPGIGPAVLAKLKDQASV
GAPAPKGPAKPVLPADKK
>NMB0771 conserved hypothetical protein
MHIIDSHCHLNFEGLKERLPEVLSNMEANGVGQALAISVSRESFSEVFAI
AEAHEHIYCTIGVHPDSKEAEEFSIAEMVEAAAHPKVVGIGETGLDYYWC
KGDLSWQHKRFADHIEAANQTGLPVIVHTRDAAADTLSILKECRVNSGVI
HCFSEDIGFARAAMDLGLYISFSGIVTFKNAPLVQEAAKYVPDDRILVET
DAPFLAPVPKRGRQNEPAFVRHTAEHIAKLRNQTLEQVAAYTTENFYRLF
KKVPDMRTV
>NMB1102 hypothetical protein
MVRTVKSYNGEADDLAGQIHTLPAVWVTYGGSKVEPASTGGVCGRYQDTA
EFVVMVAARNLRNEQAQRQGGIDSREIGSNDLIRAVRRLLDGQRLGFADS
RGLVPKAVRAIANHVLVQNAAVSIYAVEYAIRFNTCGLENDRYPERTDNP
DDPNHIFTKYQGTLSEPWPDFEGLDGKIYDPQSADEIPVNLTLKDKQ
>NMB2007 ATP-dependent RNA helicase HrpA, truncation
MFPDFSQTLSKDRHFLRSAFKNPNKYGGLSKIEEKYRKSHEIFLKRLAAL
PKPEFDNTLPVHEKLEEIKKAIAKNQVTIICGETGSGKTTQLPKICLELG
RGAAGLIGHTQPRRLAARSVAERIAEELKSEIGSAVGYKVRFTDHTSRDA
CVKLMTDGILLAETQTDRYLAAYDTIIIDEAHERSLNIDFLLGYLKQLLP
RRPDLKVIITSATIDAERFSRHFNGAPVLEVSGRTYPVEILYRPLTGKDE
DDAEVELTDAIVDAADELARHGEGDILVFLPGEREIRETAEALRKSTLRR
NDEILPLFARLSHAEQHKIFHPSGAKRRIVLATNVAETSLTVPGIKYVID
TGLARVKRYSARAKVEQLHIEKISQAAARQRSGRCGRVSAGVCIRLFSEE
DFNSRPEFTDPEIVRSNLAAVILRMAALKLGDVAAFPFLEMPDSRYINDG
FQVLLELGAVEAV
>NMB1099 transposase, IS30 family
MSYTQLTQGERYHIQYLSRHCTVTEIAKQLNRHKSTISREIRRHRTQGQQ
YSAEKAQRQSRTIKQRKRQPYKLDSQLIQHIDPLIRRKLSPEQVCAYLCK
HHQITLHHSTIYRYLRQDKSNGSTLWQHLRICSKPYRKRYGSTWTRGKVP
NRVGIENRPAIVDQKSRIGDWEADTIVGKGQKSALLTLVERVTRYTIICK
LDSLKAEDTARAAVRALKAHKDRVHTITMDNGKEFYQHTKITKALKAETY
FCRPYHSWEKGLNENTNGLIRQYFPKQTDFRNISDREIRRVQDELNHRPR
KTLGYETPSVLFLNLFQPLVP
>NMB1411 IS1016C2 transposase
MKITHCKLKKKVQKELLRFFVLEVTARSAADILGIHPNSAVLFYRKIRTV
INHHLALAADEVFEGPVEPDESDFGGRRKGRRGRGAAGKVVVFGILKRNG
RGYTVVVDNAKSETLLPVIKKKIMPDSIVYTDSLSSCDKLDVSGFIHYRI
NHSKEFADRQNHINGIENFWNQAKRVLRKYNGIDRKSFPLFLKECEFRFN
FGTPSQQLKILRDWCGI
>NMB1050 transposase, IS30 family
MSYTQLTQGERYHIQYLSRHCTVTEIAKQLNRHKSTISREIRRHRTQGQQ
YSAEKAQRQSQTIKQRKRQPYKLDSQLIQHIDTLIRRKLSPEQVCAYLCK
HHQITLHHSTIYRYLRQDKSNGSTLWQHLRICSKPYRKRYGSTWTRGKVP
NRVGIENRPAIVDQKSRIGDWEADTIVGKGQKSALLTLVERVTRYTIICK
LDSLKAEDTARAAVRALKAHKDRVHTITMDNGKEFYQHTKITKALKAETY
FCRPYHSWEKGLNENTNGLIRQYFPKQTDFRNISDREIRRVQDELNHRPR
KTLGYETPSVLFLNLFQPLIH
>NMB2148 transposase, IS30 family
MSYTQLTQGERYHIQYLSRHCTVTEIAKQLNRHKSTISREIRRHRTQGQQ
YSAEKAQRQSQTIKQRKRQPYKLDSQLIQHIDTLIRRKLSPEQVCAYLCK
HHQITLHHSTIYRYLRQDKSNGSTLWQHLRICSKPYRKRYGSTWTRGKVP
NRVGIENRPAIVDQKSRIGDWEADTIVGKGQKSALLTLVERVTRYTIICK
LDSLKAEDTARAAVRALKAHKDRVHTITMDNGKEFYQHTKITKALKAETY
FCRPYHSWEKGLNENTNGLIRQYFPKQTDFRNISDREIRRVQDELNHRPR
KTLGYETPSVLFLNLFQPLIH
>NMB1601 IS1106 transposase
MSTFFQQTAQAMIAKHIDRFPLLKLDRVIDWQLIEQYLNRQKTRYLRDHR
GRPAYPLLSMFKAVLLGQWHSLSDPELEHSLITRIDFNLFCRFDELSIPD
YSTLCRYRNRLAQDNTLSELLELINRQLTEKGLKIEKASAAVVDATIIQT
AGSKQRQAIEVDEEGQISGQTTPSKDSDARWIKKNGLYKLGYKQHTRTDA
EGYIEKLHITPANAHECKHLSPLLEGLPKGTTVYADKGYDSAENRQHLEE
HQLQDGIMRKACRNRPLSEVQTKRNRYLSKTRYVVEQSFGTLHRKFRYAR
AAYFGLIKVSAQSHLKAMCLNLLKAANRLSAPAAA
>NMB2011 ATP-dependent RNA helicase HrpA, truncation
MQNMKNQVRGSGMDARSNPANVSDGLQNSSGHIGTNTRYRLTKLGEQIAR
LPIDPKIARILLAAKKHDCMAEILVIASALSIQDPRERPLEARDASAKAH
ERFTDKQSDFLAYLNIWDSFQRERDKGLSNKQLVQWCRQYFLSHLRMREW
RELHHQLAQTAIEMGLTTKEAAFRRPPEVRQLTSSENAGDQDLSAKLKQK
QLDKKQHRAQIRAAKEAGYEQIHRALLTGLIANVGMKSPDGNDYTGARGS
RFHLFPASALFKAKPKWVMAAELVETTRLYARDVAVIQPEWIEQEAPHLV
RYHYFEPHWEQKRGEVVASERVTLYGLTVLPRRPVSYGKVAPEEAREIFI
RSALVAQECDLKADFFVHNKKLIKEITELEHKSRKQDVLVDDEALFAFYN
ERLPEMAWKDAQGSVWGSEDSVRIIESDKAERSSENERNEFRKNKRNGSR
QNENHGNTVGWVENPTSAATAKTVGFDNPTYAAQQTTPSPVGEGRGEGKT
VAAQTNFSATAANPLPNPLPQEREQSAAASTISDDLRPANLQQTAPSPVG
EGWGEGKTVATQTNFSATSTNPLPQEREQSASASTFSDDLRPANLQQPSP
SPVGEGWGEGKTVATQTNFSATSTLSDDSKPKKQPAPQKNRLKPLPLADI
RTFQAWLKTAERDNPRLLFLSRDDLMQHAAAHITEEQFPKFWQTADGKFK
LSYRFEPHHPLDGVTMTVPLTVLNRLHAPSLEWLVPGMIREKIQLQIKAL
PKQIRRICVPVPEFITQFLSQNPDRNAPILPQLAQAIAKTAGDIRIFEQI
NQDEWAAFRLPEHCYFNLRIIDDGGQELAGGRKLHELQQQLGQAAAVTFR
DNTQEFERDNVTAWDIGTLPESIKFARGKQQLTGYLGLQKEKDGRIALRL
FDTTEAAEQAHRQGVIELMKLQLKEQVKDLNKGIQGFTQAAMLLKHINAD
TLRDDLTQAVCDRAFIGEDELPRNEKAFKEQIKRARSRLPAVKEALSRYL
QETAAVYAELNSKLGKHPLTHLLRLRLQTLLAAGFATRTPWAQWPRLPIY
LKAMTLRLEKYSSNPARDAAREADIQELEQMWQEKTDSLIKQGLPISDGL
AAFKWMIEELRVSLFAQELKTPYPVSVKRLLKEWEKIEK
>NMB1464 conserved hypothetical protein
MKYRRFYRNGGTYFFTVVTNKRQKILTDDAVRLALRQAVMAVRERYPFEI
LAWVLMPDHLHTIWRLPDNDSAYSERWRQIKRHSQYLIGGNLRLWQKRFW
EYTIRDEADFAWHFDYLHFNPVKHGYVGQISDWGFSTFHRYVKQGIYPHN
WGGGNADFSIGYD
>NMB0769 putative DNA polymerase III, delta prime subunit
MIYPWHNEQWRQIAEHWERRPNAWLFAGKKDTGKTTFARFAAKALLCETP
APGCKPCGECMSCHLFGQGSHPDFYEITPLSDEPENGRKLLQIKIDAVRE
IIDNVYLTSVRGGLRVILIHPAESMNVQAANSLLKVLEEPPPQVVFLLVS
HAADKVLPTIKSRCRKMVLPAPSHEEALAYLRERGVAEPEERLAFHSGAP
LFDEADGVRALRIKLLDILAEPRLLKILDYAALFDKEKLPLAVFVGWMQK
WLVDLGLCLQHMKPVYYPAYEDRLLQTVSGFRPRNVFAAEDMLKQLAPYG
FHTLNVKMQIEHLLINYLELKKENG
>NMB1749 conserved hypothetical protein
MIYLFTGNMGTGKTSRVVSMILNNEDGLFKMKLEDGTEVDRPLYFCHIDG
LDKRQFKAHELTEEQIMSAPLRDVIPEGAVLIVDEAHYTYPVRAAGRPVP
PYIQELTELRHHGHTVILMTQHPSQLDIFVRNLVSKHVHLERKAIGMKQY
YWYKCVTSLDNPAGVSGVEVASWKPPKEAFKYYKSASQHQKFKKKVPWAV
WALIAIVGFVGWKSYGIFKVYSKATDSRIEQEAQKESVVQTMTEQPASSE
EMPLKNSDNLKPEDFVPTLPEKPESKPIYNTVRQVKTFEQIAGCIDGGKS
DCTCYSNQGTPLKEITKIMCKEYVKNGLPFNPYKDEQQRTEQVEQSAKAD
KPQVLVMGGKP
>NMB0047 conserved hypothetical protein
MQPAVYILASQRNGTLYIGVTSDLVQRIYQHREHLIEGFTSRYNVTMLVW
YELHPTMESAITREKQLKKWNRAWKLQLIEENNVSWQDLWFDII
>NMB1420 putative factor-for-inversion stimulation protein Fis
MPHTLPDISQCIRQNLEQYFKDLNGTEPCGVYDMVLHQVEKPLLVCVMEQ
CGGNQSKASVMLGLNRNTLRKKLIQHGLL
>NMB0522 transposase, truncated
MRKYNGIDRKSFPLFLKECEFRFNFGTPSQQLKILRDWCGI
>NMB1657 comE operon protein 1-related protein
MVPRLPIPNRTVKRLSADDSVVLPCESRSLPNTHSENPRLFGGFCFARKK
CLLCPEKMSVMAGRHPYGVRSGLRRNGLKLWDIHFRMTRFIVARCGLLFA
TLKGKTMKKMFVLFCMLFSCAFSLAAVNINAASQQELEALPGIGPAKAKA
IAEYRAQNGAFKSVDDLTKVKGIGPAVLAKLKDQASVGAPAPKAPAKPVL
PADKK
>NMB0725 modification methylase HgaI-1
MMIGASLFSSAGIAETYLHNAGIKIIAANELVPERANLYKALYPESKMII
GDILHEEVFQNLIQSVPNRLDFLIASPPCQGMSVAGKNRNIQEMANDKRN
HLIFRVIEFILLKRPTFVLIENVPFFLKIKLPYKGTLQTVEVILQDLFGC
EYYIQTHIFDSADYGVAQHRKRAIIRMNKHSTIWGMPEKVTKTISVRDAI
SFLPSIESGQKSNVKWHFARTHAPEHIIWLKNTPTGRSAFDNIEHYPKKK
NGEKIKSYNTTYRRMEWDAPAPTITIRNDAISSQLNVHPGRSMPDGTYSD
ARVLTPLELMLLTSLPIDWNIPDDTSELLIRQCIGESIPPLLIKKIVERI
GK
>NMB1259 transposase, IS30 family
MSYTQLTQGERYHIQYLSRHCTVTEIAKQLNRHKSTISREIRRHRTQGQQ
YSAEKAQRQSRTIKQRKRQPYKLDSQLIQHIDPFIRRKLSPEQVCAYLCK
HHQITLHHSTIYRYLRQDKSNGSTLWQHLRICSKPYRKRYGSTWTRGKVP
NRVGIENRPAIVDQKSRIGDWEADTIVGKGQKSALLTLVERVTRYTIICK
LDSLKAEDTARAAVRALKAHKDRVHTITMDNGKEFYQHTKITKALKAETY
FCRPYHSWEKGLNENTNGLIRQYFPKQTDFRNISDREIRRVQDELNHRPR
KTLGYETPSVLFLNLFQPLIH
>NMB0583 IS1016C2 transposase
MLPSKYEDNALQIKEKSTERTAPFFVLEVTARSAADILGIHPNSAALFYR
KIRTVINHHLALAADEVFEGPVEPDESDFGGRRKGRRGRGAAGKVVVFGI
LKRNGRVYTVVVDNAKSETLLPVIKKKIMPDSIVYTDSLSSYDKLDVSGF
IHYRINHSKECADRQNHINGIENFWNQAKRVLRKYNGIDRKSFPLFLKEC
EFRFNFGTPSQQLKILRDWCGI
>NMB1322 putative primosomal replication protein n
MGFNNLVSLAALIEKVFPIRYTPAGIPVLDIILKHESWQEENGQQCLVQL
EIPARILGRQAEEWQYRQGVYVHVEGFLAQKSRRSLMPMLRIQNIQEYKG
>NMB1422 putative ATP-dependent RNA helicase
MSNPFSSLGLGTELVSALTAQGYENPTPIQAAAIPKALAGHDLLAAAQTG
TGKTAAFMLPSLERLKRYATASTSPAMHPVRMLVLTPTRELADQIDQNVQ
GYIKNLPLRHTVLFGGMNMDKQTADLRAGCEIVVATVGRLLDHVKQKNIH
LNKVEIVVLDEADRMLDMGFIDDIRKIMQMLPRQRQTLLFSATFSAPIRK
LAQDFMNAPETVEVAAQNTTNANVEQHIIAVDTIQKRNLLERLIVDLHMN
QVIVFCKTKQSVDRVTRELVRRNLSAQAIHGDRSQQSRLETLNAFKDGNL
RVLVATDIAARGLDIAELPFVINYEMPAQPEDYVHRIGRTGRAGADGVAI
SLMDESEQKMFESIKELTGNKLLIERIEGFEPQWWEQGGAKPEKPEMREP
RQRNRYESAKAQREKNTRPENAANDAGAACGKIAGRSRRSRREHRTCALL
QPRYGVK
>NMB1337 conserved hypothetical protein
MHKIPKGTALAFDFGEARIGVAQGDAELGLSHPLSTVTGGSNDEKFAAIA
KLVQEWQPRYFVVGLPVHTDGTKHEMTHLSRKFGRRLNGRFNLPVYWVDE
RLSSVYAESLLSEAQVFGKKRKSVLDQVAAQAILHGFFEGGPAECFNGRE
G
>NMB1033 modification methylase NlaIV
MQQIKFIDLFSGMSGIRKGFEQACRKQSVACECVFTSEIKPAALEVLKQN
YPDEVPYGDITKIETGDIPDFDILLAGFPCQAFSFAGKRLGFEDTRGTLF
FDVARILKAKKPKGFILENVEGLVTHDRKDPTQKIGRTLTVILETLETLG
YYVSWKVLNAKDFGIPQNRKRIYLTGSLKSKPDLSFETTLSPKLKNILES
GLPTESSPFIKKLLKKFPPSELYGKSVKDKRGGKNNIHSWDIELKGTVTE
EEKQLLNMLLKERRKKKWASEIGIDWMDGMPLTKAQISTFYKHPNLQNIL
DSLTDKGYLVLEHPKQKIGGRRIKDESLPKGYNIVSGKKSFEINKILDPN
DVAPTLVAMDMEHLFVVDNGGLRTLTGKEGLRLFGYPDDYSFDIPKKDKY
DLLGNTVAVPVIKAVSERLLHTL
>NMB0834 transposase, IS30 family
MSYTQLTQGERYHIQYLSRHCTVTEIAKQLNRHKSTISREIRRHRTQGQQ
YSAEKAQRQSRTIKQRKRQPYKLDSQLIQHIDTLIRRKLSPEQVCAYLCK
HHQITLHHSTIYRYLRQDKSNGSTLWQHLRICSKPYRKRYGSTWTRGKVP
NRVGIENRPAIVDQKSRIGDWEADTIVGKGQKSALLTLVERVTRYTIICK
LDSLKAEDTARAAVRALKAHKDRVHTITMDNGKEFYQHTKITKALKAETY
FCRPYHSWEKGLNENTNGLIRQYFPKQTDFRNISDREIRRVQDELNHRPR
KTLGYETPSVLFLNLFQPLIH
>NMB2085 hypothetical protein
MSSNQYIQSLELTNFTVLPNDTFEFSENLNVIVAENGCGKTHLLKILYSL
LEVTSNTKNRLLKTELQKSFADKLLNVFRPDSLGRLSKRLQGRGRTEIVL
KLQNGTTHSSLNFSSNSSSQVNVQSIGLKENEYTPTPIFLPSRELITLCP
WFTSLYQNQSIPFEETWFDTCMQLNHPLAKGPRETKIRELLEPIENAMGG
KVSEEQGRFYLSLTNTGGKIEAPLVAEGLRKFVMIARLIATGALLDKGYL
FWDEPEANLNPKLIKVAARIIWSLSQQGIQVFIATHSLFLLRELELLKLE
NNTDLPVRFFSLIASDDGTKVEQGNSINDLNTLILLDENIMQADRYLNI
>NMB0225 transposase, IS30 family
MSYTQLTQGERYHIQYLSRHCTVTEIAKQLNRHKSTISREIRRHRTQGQQ
YSAEKAQRQSQTIKQRKRQPYKLDSQLIQHIDTLIRRKLSPEQVCAYLCK
HHQITLHHSTIYRYLRQDKSNGSTLWQHLRICSKPYRKRYGSTWTRGKVP
NRVGIENRPAIVDQKSRIGDWEADTIVGKGQKSALLTLVERVTRYTIICK
LDSLKAEDTARAAVRALKAHKDRVHTITMDNGKEFYQHTKITKALKAETY
FCRPYHSWEKGLNENTNGLIRQYFPKQTDFRNISDREIRRVQDELNHRPR
KTLGYETPSVLFLNLFQPLIH
>NMB0911 transposase, IS30 family
MSHTQLTQGERYHIQYLSRHCTVTEIAKQLNRHKSTISREIRRHRTQGQQ
YSAEKAQRQSQTIKQRKRQPYKLDSQLIQHIDPLIRRKLSPEQVCAYLRK
HHQITLHHSTIYRYLRQDKSNGSTLWQHLRICSKPYRKRYGSTWTRGKVP
NRVGIENRPAIVDQKSRIGDWEADTIVGKGQKSALLTLVERVTRYTIICK
LDSLKAEDTARAAVRTLKAHKDRVHTITMDNGKEFYQHTKITKALKAETY
FCRPYHSWEKGLNENTNGLIRQYFPKQTDFRNISDREIRRVQDELNHRPR
KTLGYETPSVLFLNLFQPLIH
>NMB0635 transposase, IS30 family
MSYTQLTQGERYHIQYLSRHCTVTEIAKQLNRHKSTISREIRRHRTQGQQ
YSAEKAQRQSRTIKQRKRQPYKLDSQLIQHIDPLIRRKLSPEQVCAYLCK
HHQITLHHSTIYRYLRQDKSNGSTLWQHLRICSKPYRKRYGSTWTRGKVP
NRVGIENRPAIVDQKSRIGDWEADTIVGKGQKSALLTLVERVTRYTIICK
LDSLKAEDTARAAVRALKAHKDRVHTITMDNGKEFYQHTKITKALKAETY
FCRPYHSWEKGLNENTNGLIRQYFPKQTDFRNISDREIRRVQDELNHRPR
KTLGYETPSVLFLNLFQPLIH
>NMB1895 DNA adenine methylase, truncation
MISNHDTEFTRDIYSSAILKTVEVQRNIAAKGSSSRKKVGELLAIYA
>NMB1022 transposase, IS30 family
MSYTQLTQGERYHIQYLSRHCTVTEIAKQLNRHKSTISREIRRHRTQGQQ
YSAEKAQRQSQTIKQRKRQPYKLDSQLIQHIDPLIRRKLSPEQVCAYLCK
HHQITLHHSTIYRYLRQDKSNGSTLWQHLRICSKPYRKRYGSTWTRGKVP
NRVGIENRPAIVDQKSRIGDWEADTIVGKGQKSALLTLVERVTRYTIICK
LDSLKAEDTARAAVRALKAHKDRVHTITMDNGKEFYQHTKITKALKAETY
FCRPYHSWEKGLNENTNGLIRQYFPKQTDFRNISDREIRRVQDELNHRPR
KTLGYETPSVLFLNLFQPLIH
>NMB0299 comEA-related protein
MSVMAGRHPYGVRSGLRRNGLKLWDIHFRMTRFIVARCGLLFATLKGKTM
KKMFVLFCMLFSCAFSLAAVNINAASQQELEALPGIGPAKAKAIAEYRAQ
NGAFKSVDDLTKVKGIGPAVLAKLKDQASVGAPAPKAPAKPVLPADKK
>NMB2017 ComEA-related protein
MSVMAGRHPYGVRSGLRRNGLKLWDIHFRMTRFIVARCGLLFATLKGKTM
KKMFVLFCMLFSCAFSLAAVNINAASQQELEALPGIGPAKAKAIAEYRAQ
NGAFKSVDDLTKVKGIGPAVLAKLKDQASVGAPAPKGPAKPAIPAAKK
>NMB1553 transposase, truncation
MSTFFQQTAQAMIAKHIDRFPLLKLDRVIDWQLIEQYLNRQKTRYLRDHR
GRPAYPLLSMFKAVLLGQWHSLSDPELEHSLITRIDFNLFCRFDELSIPD
YSIVD
>NMB2089 conserved hypothetical protein
MRLNHKQGEAGEDAALAFLQSQGCTLLARNWHCAYGEIDLIVKNGGMILF
VEVKYRKNRQFGGVAYSISPSKLLKLQRSVEYYLQQNRLTNVPCRLDAVL
IEGSRPPEWIQNITG
>NMB0361 conserved hypothetical protein
MNASNWSVYLILCENSAFYCGISPNPQQRLAAHTTGKGAKYTRVFKPVAM
RIVAGGMDKGTALRQEIAVKKLTAAQKRQLWEQAEKMPSET
>NMB1539 IS1106 transposase
MSTFFQQTAQAMIAKHIDRFPLLKLDQVIDWQPIEQYLNRQRTRYLRDHR
GRPAYPLLSMFKAVLLGQWHSLSDPELEHSLITRIDFNLFCRFDELSIPD
YSTLCRYRNWLAQDDTLSELLELINCQLTEKGLKVEKASAAVVDATIIQT
AGSKQRQAIEVDEEGQVSGQTTPSKDSDARWIKKNGLYKLGYKQHTRTDA
EGYIEKLHITPANAHECKHLSPLLEGLPEGTTVYADKGYDSAENRQHLEE
HQLQDGIMRKACRNRPLSEVQTKRNRYLSKTRYVVEQSFGTLHRKFRYAR
AAYFGLIKVSVQSHLKAMCLNLLKAANRLSAPVAA
>NMB1399 IS1106 transposase
MIAKHIDRFPLLKLDRVIDWQLIEQYLNRQKTRYLRDHRGRPAYPLLSMF
KAVLLGQWHSLSDPELEHSLITRIDFNLFCRFDELSIPDYSTLCRYRNRL
AQDNTLSELLELINRQLTEKGLKIEKASAAVVDATIIQTAGSKQRQAIEV
DEEGQISGQTTPSKDSDARWIKKNGLYKLGYKQHTRTDAEGYIEKLHITP
ANAHECKHLSPLLEGLPKGTTVYADKGYDSAENRQHLEEHQLLDGIMRKA
HRNRPLTEVQTKRNRYLSKTRYVVEQSFGTLHRKFRYARAAYFGLVKVSA
QSHLKAMCLNLLKAANRLSAPAAA
>NMB0969 hypothetical protein
MLPIIRKKVKPDGIVYTDTFRSYDVLDISEFSHLRKFNGIPKEHLGLHLK
KCQWHFK
>NMB1081 bacteriophage transposase
MKISASDIAKLGIPSLPTDRQGIEYHAKKNNWQHCFEQKGRGRPKKLYEI
ASLPAEIRAAIMKRQSDELAEKMPKMLPKVRPGTAMSAQALAEAAKLLNE
KQRSVADARCAVVAAVLGIKYEYDCSAKAAVAQFLGLLAEGKLDAVTLGN
LEKANDRSRTAKVGERTLDGWISAYLKAENATERLVALAPKTTKAVKPIE
SYGWLPMFMQFHNIPSAPKLAHSYRWFVQWAEAENMPVNDVPNLSMVRRV
WEKLPLIMQERGRKTGAAYKSLLPYVKRDWGALKPNDVWIGDGHSFKAKV
AHPVHGRPFKPEVTVIIDGCTRFVVGFSVSLAESCVAVSDAMRIGVKHFG
LPIIYYSDNGGGQTGKTIDHEITGITSRPGIRHETGIAGNPQGRGIIERW
WKDNLIEMARQYETFAGAGMDSSTKNLMYRKMESAFNALEKGKDLTEEQQ
KYLKKLPSWSRFIADVVKCIDEYNNRPHGELPRHPDGGHYTPKAYREMRL
EQDGIAPDMLSAQELATMFMPQEVRKVQRGWLDLFNNSYFSTELAEYHKD
EVRVSYDLSDASAVNVFDMDGKFITKAQANGNTREAFPTARIDQLAEKRR
KGKIKRAENAIKLANAEVNPALEQAAVWDELGHLGGNDIEAEYAVLPKTG
TDDFVLFEADR
>NMB0495 replication protein
MLLTLHGTDKFCIVNNFHTNRNTAYKALKDACNNLFERQFSFIEKTPKGE
KVVRTRWVSQVAYIEQQATVELVFAPNVAPLITMLEKNFTSYELDQVSSL
SSKYAVRLYEIIISWRAAGKTPMFSTMELRERLGMMPDEYQKMELFKRKV
LDFAVKQINDKTDISITYEQHKEGRKIVGFTFSILHKIGSKDIPLENQSE
LFAGMTDLEAGTIRVRAEAYIASLIAKGQNVTKAHRLNILKKAVEERWGF
EDVAKDNGAKNPENKNAKVVLNEWEKISNGTRFKDKDGTIWVKDSGMLRT
EGTNRWIADSQIAKLFPMLTVMVEEGI
>NMB1687 conserved hypothetical protein
MNFTDTHCHLADPALRENLPHILTAARKVGVKRFIVPATRPQDWQDVADL
AEMPSEHGQIRIALGIHPWFSDGIAERDFVRLETMLAHYPQAWVGEIGLD
FYDKTQTSQQRERQIQVFVRQLEIAQTLRRRVIIHNLKATADIAAAVKQT
GFAQGGIVHAFSGSAEEARVLTKLGFKIGIGSLLLNPNARKVRDTLKALN
DGDFVLETDSPFMLKKEINTPANIPGIAKIAAEIRGTCVEEIAKVTERNA
DALLGR
>NMB1258 conserved hypothetical protein
MTDLFAREPDAPLAERLRPHTLDDVVGQEHLIGEGKPLRVAVEGGKPHSM
LLWGPPGVGKTTLARILAQSFNAQFLPVSAVFSGVKDIREAIDKAEIALQ
QGRATILFVDEVHRFNKAQQDAFLPHVESGLLTFIGATTENPSFEVNPAL
LSRAQVYVLQPLSSDDLKKLIAKVLALPEYQEFTIETDAQKLLVNTADGD
ARRLLNLLEQLLRAADTRRLKNLTAEFLADSLGAQIRRFDKGGESFYNQI
SALHKSVRGSHPNAALYWFCRMLDGGTDPRYLARRIVRIAWEDIGLADPR
AFQIANDAAATFERLGSPEGELALAQAVLYLAAAAKSNAGYKAYNQMRHF
VKENASDEVPVHLRNAPTKLMKELGYGREYRYAHDEPNAYSAGESYMPDG
LDEPDFYQPVPRGLEIKIGEKLEWLKSLDEEVLKAK
>NMB1602 putative transposase
MLIHYIDIAKRNFVIAVSSLSKTKTETNNPKGIAHTIEYLKKHKVALVVT
ESTGGLEIPAAKAIHRAGIAVIIANPRQTHQFAQSQSLTKTDAKDAKMPA
FFAQMKAQKEDWQTMPYHPPTEAEEVLEALVNRRNQSADMRTAEKNRLHQ
VHETQVGSVKQLIAHFDRLIDESDKQIDDHTHTHFDGKAQVAEQIKGIGS
ITTATLMAMLPELGRLSHKRIASLVGIAPHPRKSGEAKFKSRCFGGRSAV
LKALYMATVAATRFEPLIRDFHQRPLSEGKPYKVAVTACMRKLLETFAKF
LSLTTTEIPTQVFGCFRPKYRLILPKHPLNPPRTPDNQASGLPFRRQRAH
LACWRLSTGSNTSPSDGFAHSL
>NMB1634 conserved hypothetical protein
MSEAEYFSHFISNGNGKLLEIPQRRGRQDGVFIDWLSFTLHEDSLLKVSG
CPLVSDAEYMFVLSKKLEEILGFGITSRCKSKGNKFYDSMFRLGSEEVDY
GEVHYGGQRNTVLIELKGVGCNIANPGWELRLKQFLEDSLRPRITRVDLA
LDFFDGEYTPEQALLDHDNGFFDNSNMRPKSEMVGTAWRREDGSGKTFYV
GRKKNSRFVRVYEKGRQLGDKESKWVRFEIQFNHGDMEIPLDILINQGSY
FSGAFPICQKFKNMPNPERFDYRKKVANLTFQHKLRYAKNAVGKLINFMF
DMGFDSDEIVRYLKADLGYPKGLEPEKYSLAGLKESLKFGFIHEQPDVDL
EVELEELGIIKFKQSDKFDPDKRLFDPHHDVESERQYQLYLDRMYDLHAN
QN
>NMB1386 putative transposase
MAYSADLRNKALNYSGLNLNQDKATKPQTVQIVRQGEATPYWFKFNPLYY
EQCKNISQTAATFNLSRNTLYLWIRLKKQTGSLKHQVTGLNAVKSDRQKP
AQYVGQHPDAYLHEIAKHFDCTAATICYALKQMGITRKKRPPLTKNKTRP
K
>NMB0122 conserved hypothetical protein
MAAGKHTKHSNRVRIIGGQCRGRKLSFTSADGLRPTPDSVREKLFNWLGQ
DLTGKTVLDLFGGSGALGIEAASRNAKRVLISDNNRQTVQTLQKNSRELG
LGQVQIVFSDGIAYLKTVSEQFDVVFLDPPFAWQDWQILFDALKPCLNPR
AFVYLEAGTLPNIPDWLTEYREGKSGQSTFELRVFQVAE
>NMB0287 dinG, probable ATP-dependent helicase DinG
MLTDLEKNAIRDHYQNIGKNLPGFRPRASQREMIAAVANAFSRTLAREEG
GEPPKREGESIAVIEGPTGVGKSLAYLLAGGIMAQTRGKRLIVSSATVAL
QEQLVDRDLPFLVEKSGLELTFALAKGRGRYLCPYKLYRLTQSNAQQNLL
GFEAPAVLWDSKPKPEELKLLRDIADEFSARRFNGDRDTWPEKIDDAIWL
KVTNDRHGCLKTACPNRPECPFYLARDVLETVDVVVANHDLLLADISMGG
GVILPAPENSFYCIDEAHHLPKKALSRFAAEHSWNIAVWTLEKLPQLTGK
IAALTDKAELANLADEAAASLLDSLHEWQFHLAEEPSLSLGVSENDRRTN
SEPTWLWEDGKIPEGLETTVSNTAIAARSLLKHVIGLNDALSAARREKEQ
DGALLDRLTSEFGLFIARIEQISAVWDLLSTVPLEGEEPLAKWITRRADD
KNDYIFNASPISSASHLANSLWRRAAGAVLTSATLQSLGNFNLMLRQTGL
QWLPETTTLALKSPFDFEKQGELYIPPIYASPKDPEAHTAAVIEWLPKLI
SPTEAIGTLVLFSSRKQMQDVALRLPGDYLPLLLVQGELPKAVLLQKHHR
AIEEGKASIIFGLDSFAEGLDLPGTACVQVIIAKLPFAMPDNPIEKTQNR
WIEQRGGNPFIEITVPEAGIKLIQAVGRLIRTEQDYGRVTILDNRIKTQR
YGQQLLAGLPPFKRIG
>NMB1448 dinP, DNA-damage-inducible protein P
MSSRKIIHIDMDAFYASVELREQPHLKGRPVVVAWEGARSVICAASYEAR
QFGLHSAMSVATAKRLCPQAVYVPPHFDLYRQVSAQIHAVFRRYTDLIEP
LSLDEAYLDVTRNFKNIPYAGDVAKEIRAAIFAETGLTASAGIAPNKFLA
KIASDWRKPNGQFVLPPHKVMAFLETLPLGKIPGVGKVTLKKMQSLGMRT
AGDLRRFERGELLNHFGRYGYRLYDLVRGTDERPVKAERERLQISTEITL
PEDLPLEQAAGHLPHLAEDLWRQITRKNVEAQSVTLKLKTYDFRIITRTL
TYSSVLPDCALCCRLRKC
>NMB1903 dnaA, chromosomal replication initiator protein DnaA
MTLAEFWPLCLRRLHDMLPQGQFAQWIAPLTVGEEGGVWVVYGKNQFACN
MLKSQFAGKIEAVREELAAGRSAFVFKPGEGVRYEMAAVEGAVEPAEPSL
HAVSEGMPVQEVLLDELPSEEPVKPAASKTAADILAERMKNLPHEPRQAA
GSASRPESVAVAKARTDVQRDAEEARYEQTNLSPDYTFDTLVEGKGNRLA
AAAAQAIAESPGQSYNPFFLYGSTGLGKTHLVQAVGNELLKNRPDAKVRY
MHSDDYIRSFMKAVRNNTYDVFKQQYKQYDLLIIDDIQFIKGKDRTMEEF
FYLYNHFHNEKKQLILTCDVLPAKIEGMDDRLKSRFSWGLTLELEPPELE
MRIAILQKKAEAAGISIEDEAALFIANLIRSNVRELEGAFNRVGASSRFM
NRPVIDIDLARTALQDIIAEKHKVITADIIIDAVAKYYRIKISDVLGKKR
TRNIARPRQVAMSLTKELTTLSLPSIGDSFGGRDHTTVMHGIRAVAKLRE
EDPELAQDYEKLLILIQN
>NMB0885 dnaB, replicative DNA helicase
MNDYAAMPSEDREVGALSLPPHSMEAEQSVLGGLMLENPAWDRIADVVSG
EDFYRHEHRLIFRSIAKLINESRPADVITVQEDLQRNEELEAAGGFEYLI
TLAQNTPSAANIRRYAEIVRERSIMRQLAEVGTEIARSAYNPQGRDAGQL
LDEAENKVFQIAESTAKSKQGFLEMPDLLKEVVQRIDMLYSRDNPDEVTG
VPTGFIDLDKKTSGLQPGDLIIVAGRPSMGKTAFSINIAEHVAVEGRLPV
AVFSMEMGGAQLVMRMLGSVGRLDQSVLKTGRLEDEHWGRLNEAVVKLSD
APVYIDETPGLTALELRARARRLARQFNNKLGLIVIDYLQLMAGSGRSDN
RASELGEISRSLKALAKELQVPIIALSQLSRTVESRTDKRPMMSDLRESG
AIEQDADLIMFMYRDEYYNQDSPMKGLAECIIGKHRNGPVGKIFLTWTGQ
FTKFDNAAYIPEEAKIED
>NMB1827 dnaE, DNA polymerase III, alpha subunit
MTEPTYIPLRLHTEFSITDGMVRIKKLIAKAQEYGLPALGISDLMNEFGL
VKFYKACRSAGIKPIGAADVRIGNPDAPDKPFRAMLIIRNDAGYLRLSEL
LTAAYVGKDRNVHHAELNPEWLENGDNSGLICLSGAHYGEVGVNLLNGNE
DAARTAALKYAAWFPDAFYMELQRLPERPEWEACVSGSVKLAEELGLPVV
ATHPTQFMSRDDFNAHEARVCIAGGWVLTDKKRPRDFTPGQFFIPPETMA
ERFADLPEALENTVEIAKRCNLHITLGKNFLPLFPTPDGLSLDDYLIKLS
NEGLQERMVQLYPDEAERAAKMPEYQERLDFELNIIIQMKFPGYFLIVQD
FINWAKTHGCPVGPGRGSGAGSLVAYSLKITDLDPLKYALLFERFLNPER
VSMPDFDVDFCQSNRGRVIEYVREKYGAEAVSQIVTFGTMSSKAVIRDVG
RVLELPFMLCDKLSKLIPLEANKPLSLEKAMETEPQIQELIEAEEADELI
TLAKKLEDLTRGLGMHAGGVLIAPGKISDYSPVYQADESASPVSMYDKGD
VEDVGLVKFDFLGLRNLTIIEMAQNNIKNTTGDIIDVGKIPLDDQVAYQI
FRDANTTAVFQFESTGMKKMLKTAHTTKFEELIAFVSLYRPGPMDNIPDF
VARMKGQEFQYIHPLLEGILAPTYGIMVYQEQVMQAAQIIGGYSLGGADL
LRRAMGKKKPEEMVKHREIFAEGAAKQGISREKSDEIFNYMEKFAGYGFN
KSHAAAYALISYQTAWLKAHYPAEFMAATMSSELDNTDQLKHFYDDCRAN
GIEFLPPDINESDYRFTPYPDMKIRYALGAIKGTGEAAVESITAARQSGG
KFTGLLDFCERVGKEHMNRRTLEALIRGGAFDSIEPNRAMLLANIDLAMD
NADQKAANANQGGLFDMMEDAIEPVRLIDAPMWSESEKLAEEKTVIGFYL
SGHPFGPYAQEVRQIAPTKLDRLKPQDSVRLAGFVTAVRTMMGKRGKIAF
VSLEDLSGQVEIMVGGQTLENCADCLKADQVLIIESKVSRDDYGGGDGLR
ILANQVMTLQTARERYARSLSLALAPHHDIGGLVRLLAAHQLPDTPRIPL
QLSYANEKASGRLQVPPKWTVTPSSALFGELETLLGSRSVRVNW
>NMB1537 dnaG, DNA primase
MIPSDFIDELLAKTDIVDIIDEQVPLKKGGANYMACCPFHKEKTPSFSVS
PTKQFYHCFSCGAHGSAIGFVMEHQGLSFPEAVQFLADRVGMVVPKVHGQ
NDNPEVRAERKKKQQTLEETTAAAADFYAQQLKFNPAAKAYLDKRGLSAE
VIAHYGLGYAPDGWQPLTQVFQPYPNTALVDTGMVIDNEGRHYDRFRHRI
MFPIRNPRGQVIGFGGRVLDDSKPKYLNSPDTPLFDKGKNLYGLYEGRAA
VKEAGRILVVEGYMDVVALAQFGVGYGVAALGTATTAEHVKILMRQADSI
YFCFDGDSAGRKAAWRALENALPQLKDDKSLHFLFLPEEHDPDSYIRAYG
KAQFEDALLNQSKPLSEYFWEHLSDGIHLNTQEGKAELVKTSSPLLAQIT
APALAYLLKQRLSELVGIDPDNLAQLLGQEAPKRHVKQKNYKLPPISVKQ
PVMLTLVQRQIRSLLINPDWAAYIDLPDYLALDGDFACLANLAESIKNHA
AVPETAQVLEYMRGSPYEETITRIFHSTHQSEEMNSSSEEDCENFQIGMK
KLLNELKYSQIETLKQKSLQSGLNESEKKLLLSLLTAKQN
>NMB1902 dnaN, DNA polymerase III, beta subunit
MLILQAERDSLLKPLQAVTGIVERRHTLPILSNVLIEGKGGQTKLLATDL
EIQIDTAGPEGGAGDFRITTNAKKFQDILRALPAGALVSLDWDDSRLTLK
AGKSRFALQTLPAADFPMMNVGEDISATFSLEQERFKTMLSQVQYSMAVQ
DIRYYLNGLLMQVEGSQLRLVATDGHRLAYAACAIDADLPRAEVILPRKT
VLELFKLLNNPDDPIQIELLDKQVRFQCNGTTIVSKVIDGKFPDFNRVIP
LDNDKIFVLSRAELLGALERASILANEKFRGARLFLQPGLLSVVCSNNEQ
EEAREEIEIAYQGGELEVGFNIGYLMDVLRNIHSDDMQLAFGDANRSTLF
TVPNNPNFKYIVMPMRI
>NMB1451 dnaQ-1, DNA polymerase III, epsilon subunit
MLFEFKENKMIVASRWPLLEKVFLRFGMPVAVVDLESTGGNLYEDRVTEV
ALVKFEQGRVVRHEWLVNPQKPIPQFVAGLTGISDGMVADAPVFAEIAGE
LFSVLKGCVLVAHNSRFDYTFLKHEFHRAGIGFSSPALCSVQLSRCLYPQ
FYKHSLDSIIERLGIVVEDRHRAMADVSALCDYLEYSLSEHGVEAWIRQC
FRLMNPKPLPAALPERLREQLYGLPDGMGVLACFDGGGKVNYIGTFERVY
SEISALLDSGKAPFDWCNTEEVRFFPALGSLHAYKIKAELVGRYHSDCYV
SAKNLLKTFTTVRFEKGSDGMLNAKTAALKNGVTDNPPTGLFANKKAARR
ALSSWAETYGLCPAAAGILPDGYAEDEPCPVYVSGRCDKACGRSDEQVLA
FAHKLPVLDWGKMHEVEITETDPLTGEKVVLHGMGGALEMDDGLWYFDKD
LPDAFKAKFKTDRKNIKEIG
>NMB1514 dnaQ-2, DNA polymerase III, epsilon subunit
MTTRQIILDTETTGLYADGGDRLVEFAGLEMVNRQMTDKNLHLYVHPERD
MPEEAARVHGLTIQVLEGKNAPPFAEVGRQIADFLRGAELIIHNAKFDVG
FLNMEFRRMGLPTVEELGCTVTDTLAMAREMFPGQKASLDALCNRFSVDR
SKRVLHGALIDCELLGEVYLAMTRRQFDLMGAAAEEKMETKPVVHTETKR
SGKLKVIRADENELAAHGQYLDGLGEACIWRKEAVPSENGGTDA
>NMB1443 dnaX, DNA polymerase III, subunits gamma and tau
MAYQVLARKWRPKTFADLVGQEHVVKALQNALDEGRLHHAYLLTGTRGVG
KTTIARILAKSLNCENAQHGEPCGVCESCTQIDAGRYVDLLEIDAASNTG
IDNIREVLENAQYAPTAGKYKVYIIDEVHMLSKSAFNAMLKTLEEPPEHV
KFILATTDPHKVPVTVLSRCLQFVLRNMTAQQVADHLAHVLDSEKIAYEP
AALQLLGRAAAGSMRDALSLLDQAIALGSGKVAENDVRQMIGAVDKQYLY
ELLTGIINQDGAALTAKAQEMAACAVGFDNALGELAILLQHLALIQAVPN
ALAHDDPDSDILHRLAQTISGEQIQLYYQIAVHGKRDLSLAPDEYAGFMM
TLLRMLAFAPLAAASCDANAVIENTELKSPSAQTAEKETAAKKPQPRPEA
ETAQTPVQTASAAAMPSEGKTAEPVTNQENNDIPPWEDAPDETAAGTAQA
SAKSIQTASEAGTPPKNQVSKNEAADNETDAPLSEVPSENPIQATPNNEA
LETEAFAHEAPAKPFNGYSFPNDDYLVEDGAEIPPPDWEHAAPADAEEEN
NADESSNNEDHTPYAPPPEFSTENWAAIVRHFARKLGAAQMPAQHSAWTE
YHPDTGLMVLAMTAEARATADKKRLDKIRDTLAQAYGLQLTLQTQDWRDE
AGRETPAMQDKRVQAEDRQKAQALLEADPAAQKILQAFGAQWQPESLELA
ANRP
>NMB0116 dprA, DNA processing chain A
MTEDERFAWLQLAFTPYIGAESFLLLMRRFGSAQNALSAPAEQVAALIRH
KQALEAWRNAEKRALARQAAEAALEWEMRDGCRLMLLQDEDFPEMLTQGL
TAPPVLFLRGNVQLLHKPSAAIVGSRHATPQAMRIAKDFGKSLGGKGIPV
VSGMASGIDTAAHQGALQAEGGTIAVWGTGIDRIYPPVNKNLAYEIAEKG
LIVSEFPIGTRPYAGNFPRRNRLIAALSQVTLVVEAALESGSLITARLAA
EMGREVMAVPGSIDNPHSKGCHKLIKDGAKLVECLDDILNECPGLLQNTG
ASSYSINKGIPEKRITAVQTASDQLSLPEGKMPSEKTENRPVGGSILDRM
GFDPVHPDVLAGQLAMPAADLYAALLELELDGSVAAMPGGRYQRIRT
>NMB2082 exoA, exodeoxyribonuclease
MLKIISANVNGIRSAYKKGFYEYIAASGADIVCVQELKAQEADLSADMKN
PHGMHGHWHCAEKRGYSGVAVYSKRKPDNVQIGMGIEEFDREGRFVRCDF
GRLSVISLYLPSGSSAEERQQVKYRFLDAFYPMLEAMKNEGRDIVVCGDW
NIAHQNIDLKNWKGNQKNSGFLPEEREWIGKVIHKLGWTDMWRTLYPDVP
GYTWWSNRGQAYAKDVGWRIDYQMVTPELAAKAVSAHVYKDEKFSDHAPL
VVEYDYAAE
>NMB1278 gcr, site-specific recombinase
MADMKKITPQNLRPLLSESLGHTDFVNVLNALIKFLRRGGKKCAGERFDL
IIDTFKQDRELLSRFSRCFYIWLAQIHIYPALIKLGIFSRHSFAREMGIR
IYERFSPSYKDFANLGEVFLYLFHSENDDKWLQTLNIRQWLVLYELIRSH
AEPSKLQTAGIRLADARLRAIEMLSVWTASEAIEPDLIRIAPRLLEADSS
FVALQRETAKLVEHYRNGTTPYDTAHLEVMFDQCFSQIDYLRRKGTGAGS
GSSVKVAHLLERLRQTVDRLKLLTDIQTGAGNSNRLTIALMNSLIYAAVE
QYSTRHLRRSSIRMLARSITENKSHHGEHYITRNRKEYFKMFYSAAGGGI
IIALMALLKIRIGSLGLSPFLTSLSAGFNYGIGFMIIHMLHCTVATKQPA
MTAASFAEQVDLNEGGKAVDNKLAKLLIDVCRSQSVAVFGNVSIAILLAC
AISFGYAHLYRLPILDAHTAAYQFKSIDIIAYPTLWYAAIAGLWLFCSGI
IAGFFDNRADYLNLRQRLPFNPLLRKIMRPGPRRVLAAYIHKHYGSLVGN
FIFGMLLGMTGYFGHLLGLPLDIRHVAFSSANLGYAAVSGNVGLGTFVLG
IFSVLAIGLVNLCVSFSLALFVALRSRGTKIGSIRNLIKSFWNQIKSNPC
ILFLPPAKEQGHPPSDKP
>NMB1384 gyrA, DNA gyrase subunit A
MTDATIRHDHKFALETLPVSLEDEMRKSYLDYAMSVIVGRALPDVRDGLK
PVHRRVLYAMHELKNNWNAAYKKSARIVGDVIGKYHPHGDTAVYDTIVRM
AQNFAMRYVLIDGQGNFGSVDGLAAAAMRYTEIRMAKISHEMLADIEEET
VNFGPNYDGSEHEPLVLPTRFPTLLVNGSSGIAVGMATNIPPHNLSDTVN
ACLRLLDAPDTEIDELIDIIQAPDFPTGATIYGLSGVREGYKTGRGRVVM
RGKTHIEPIGRNGEREAIVIDEIPYQVNKAKLVEKIGDLVREKTLEGISE
LRDESDKSGMRVVIELKRNENAEVVLNQLYKLTPLQDSFGINMVVLVDGQ
PRLLNLKQILSEFLRHRREVVTRRTLFRLKKARHEGHIAEGKAVALSNID
EIIKLIKESPNAAEAKDKLLARPWRSSLVEEMLTRSGLDLEMMRPEGLAA
NIGLKEQGYYLSEIQADAILRMSLRNLTGLDQEEIVESYKNLMGKIIDFV
DILSKPERITQIIRDELEEIKTNYGDERRSEINPFGGDIADEDLIPQREM
VVTLTHGGYIKTQPTTDYQAQRRGGRGKQAAATKDEDFIETLFVANTHDY
LMCFTNLGKCHWIKVYKLPEGGRNSRGRPINNVIQLEEGEKVSAILAVRE
FPEDQYVFFATAQGMVKKVQLSAFKNVRAQGIKAIALKEGDYLVGAAQTG
GADDIMLFSNLGKAIRFNEYWEKSGNDEAEDADIETEISDGIEDETADSE
NALPSGKHGVRPSGRGSGGLRGMRLPADGKIVSLITFAPETEESGLQVLT
ATANGYGKRTPIADYSRKNKGGQGNIAINTGERNGDLVAATLVGETDDLM
LITSGGVLIRTKVEQIRETGRAAAGVKLINLDEGETLVSLERVAEDESEL
SDASVISNVTEPEVEN
>NMB0212 gyrB, DNA gyrase subunit B
MTEQKHEEYGADSIQVLEGLEAVRKRPGMYIGDTQDGSGLHHMVFEVLDN
AIDEALAGHCDKITVTIHADHSVSVADNGRGMPTGIHPKEGRSAAEVIMT
VLHAGGKFDNNSYKISGGLHGVGVSVVNALSDWVTLTIYRDGKEHFVRFV
RGETEEPLKIVGDSDKKGTTVRFLASTETFGNVEYSFDILAKRIRELSFL
NNGVDIELTDERDGKHESFALSGGVAGFVQYMNRKKTPLHEKIFYAFGEK
DGMSVECAMQWNDSYQESVQCFTNNIPQRDGGTHLTALRQVMTRTINNYI
EANEVAKKAKVETAGDDMREGLTCVLSVKLPDPKFSSQTKDKLVSGEIGP
VVNEVISQALTDFLEENPNEAKIITGKIVDAARAREAARKAREITRRKGV
MDGLGLPGKLADCQEKDPALSELYLVEGDSAGGSAMQGRDRKFQAILPLK
GKILNVEKARFEKMLASQEVATLITALGAGIGKEEFNAEKLRYHRIIIMT
DADVDGAHIRTLLLTFFYRQMPELVERGYIYIAQPPLYKAKYGKQERYLK
DELEKDQWLLGLALEKAKIISDGRTIEGAELADTAKQFLLAKTVIEQESR
FVDELVLRAMLHASPIDLTSSENADKAVAELSGLLDEKEVALERIEGHEG
HRFIKITRKLHGNVMVSYIEPKFLNSKAYQTLTQTAAALKGMVGEGAKLY
KGENGYDADSFETALDILMSVAQKGMSIQRYKGLGEMNPEQLWETTMDPA
VRRLLKVRIEDAIAADEVFVTLMGDEVEPRRAFIENNALIAQNIDA
>NMB0729 himA, integration host factor, alpha subunit
MTLTKAELADILVDKVSNVTKNDAKEIVELFFEEIRSTLASGEEIKISGF
GNFQLRDKPQRPGRNPKTGEEVPITARRVVTFHASQKLKSMVEHYYDKQR
>NMB1302 himD, integration host factor, beta subunit
MTKSELMVRLAEVFAAKNGTHLLAKDVEYSVKVLVDTMTRSLARGQRIEI
RGFGSFDLNHRPARIGRNPKTGERVEVPEKHVPHFKPGKELRERVDLALK
ENAN
>NMB0708 holA, DNA polymerase III, delta subunit
MAAHIGRIDTDAPLKPLYVIHGEEELLRIEALDALRAAAKKQGYLNREVY
TADNAFDWNELLQTAGSAGLFADLKLLELHIPNGKPGKTGGEALQDFAAR
LPEDTVTLVLLPKLEKTQLQSKWFAALAAKGEVWEAKPVGAAALPQWIRG
RLDKIGLGIEADALALFAERVEGNLLAARQEIDKLGLLYPKGHTVNIDEA
QTAVANVARFDAFQLAGAWMKGDVLRVCRLLDGLREEGEEPVLLLWAVAE
DVRTLIRLAAALKQGQSIQSVRNSLRLWGDKQTLAPLAVKRISVVRLLDA
LKTCAQIDRIIKGAEDGDAWTVFKRLVVSLAE
>NMB1230 hupB, DNA-binding protein HU-beta
MNKSELIEAIAQEADISKAAAQKALDATTNAVTTALKQGDTVTLVGFGTF
YVGERAERQGRNPKTGEPLTIAAAKTPKFRAGKALKDAL
>NMB0666 ligA-1, DNA ligase
MNPNSKHNTNFTNLLKPSDSDIKQFAAQHICRLTDLLNRYAYEYYTLDAP
SVPDAEYDKLFRELEALELNHPELKLPDSPTQRVGGEPLAGFAEVRHEVP
MLSLTNAFSPQDENGVFDHAEMYAFDQRVRDGLDGGNPEYVIEPKFDGLA
ISLLYRDGVLVQAATRGDGTTGEDVTQNIKTVSNIPLRLHGENTPELIEV
RGEVLMLKADFVALNKRQAENGQKPFANPRNAAAGSLRQLDSRITAQRKL
HFFPYSVARQQDGFVAEEHIQELAYFQALGFSLPNGNFGCFKNIDEVLAF
YEHMQQKRPELPYEIDGMVVKVNSLAQQHELGFISRAPRWAVAHKFPAEE
ALTIVEAIDVQIGRTGAVTPVARLQPVFVGGVTVTNATLHNQDEVSRKDV
RVGDTVVVRRAGDVIPEVVRVIFERRPMRETAVAVSDGIGHRQDDLFAET
PSANQTQSVPLHKPYRLPTHCPICRSEIEREEGEAVARCSGGMLCQAQRA
QGLIHFASRKAMDIDGLGEKQIEQLVAQDLVRHFADLYRLDIPTLQKMKE
TADKTVAESDQMPSEGSSVGASGKHKKQPVKWAENILAGIEASKTPELAR
FLFALGIRHVGERTAKTLAQAFGTLERVRRAPEPVLACLPDIGTVVARSI
AHFFAQAEQQAMIDELLAAGVAPQTQAVTIPPARHAEPQRWIARLPGFKI
SENKAQALWELAGKNIEGLQTDKALPTDWQAWRSEPQNAALLENLKTFFA
QMPSEDEAAQGSDGINKAVAGKTFVLTGTLPTLKRDQAQSLIEAAGGKVS
GSVSKKTDYVVAGEAAGSKLEKANALGVSVLSEAELLTLLG
>NMB2048 ligA-2, DNA ligase
MIKKTIGGIIPIFTAVFIPASAGAADLMLAQEYKGQDIAGWAMSEKLDGV
RAYWDGKHLMSRQGYAFAPPKGFTAQFPPYPLDGELYSGRGQFEQISATV
RSVSSDWRGIRLHVFDVPKAQGNLYQRLAVATQWLKTHPNAPITIIPQIK
VRDRQHAMDFLKQIEAQGGEGVMLRQPESRYSGGRSSQLLKLKSQYDDEC
TVTRHYEGKGRNAGRLGAVGCKNRHGEFRIGSGFKDKDRDNPPKIGTLIT
YRYRGFTRKGTPKFATFVRVRTDR
>NMB1281 mfd, transcription-repair coupling factor
MTYPIPKPREKSRWPNLSQGSLPLALARYLPHKRLKVVLTQDAEQALRLQ
TAWRFFRPHDTAVFLPDWETLPYERFSPHQDLVSERLSALWQIKSGAADV
LFVPVATAMQKLPPVPFLAGRTFWLKTGQTLDIGRLKSDLVDAGYNHVSH
VVAAGEFAVRGGIVDLFPMGSEMPYRIDLFDDEIDSIKTFDTETQRTISP
VSEIRLLPAHEFPTDSEAQKIFRSRFREEVDGNPNDAAVYKAVSNGHFGA
GVEYYLPLFFENELETLFDYIGEDALFVSLDDVHAEANRFWSDVKSRYAM
AQGDETYPPLLPQYLYLSADVFAGRLKNYGQVLPDVSGKEYTLPDLAVNR
QADEPLQALKDFQTAFDGRILLCAESLGRRETMLGFLQQNGLKAKPVSDW
QGFLSAHEPLMITVAPLAYGFKLGGLQSPNQQQPTPSPVGEGWGEGKAVA
AQTEFSAAAINPLPSPLPQEREQSAAAVSDSLKAAAVSTESSLPLGTSNL
HGQIRQQPAPSPVGEGWGEGKAVAAQTEFPASATNPLPSPLPQEREQSAA
AVSDDLKTKSSLHPVANNLHGQIRQQPTPSPVGEGWGEGKAVAAQTEFSA
AATNPLPSPLPQEREQSAAVVSDSLKAAAVSTESSLPPGKSNLHGQIQQQ
PAPSPVGEGWGEGKAVAAQSAIAVITESDLYQYVARSRIHNRRKKHAAVS
DGLLRDLAEINIGDPVVHEEHGIGRYMGLVTMDLGGETNEMMLLEYAGEA
QLYVPVSQLHLISRYSGQAHENIALHKLGSGAWNKAKRKAAEKARDTAAE
LLNLYAQRAAQSGHKFEINELDYQAFADGFGYEETEDQAAAIAAVIKDLT
QAKPMDRLVCGDVGFGKTEVALRAAFVAVMGGKQVAVLAPTTLLVEQHAQ
NFADRFADFPVKVASLSRFNNSKATKAALEGMADGTVDIVIGTHKLVQDD
IKFKNLGLVIIDEEHRFGVRQKEQLKRLRANVDILTMTATPIPRTLSMAL
EGLRDFSLITTAPSRRLAVKTFVKPFSEGSVREAVLRELKRGGQVFFLHN
EVDTIENMRERLETLLPEARIGVAHGQLRERELEQVMRDFLQQRFNVLLC
STIIETGIDIPNANTIIINRADKFGLAQLHQLRGRVGRSHHQAYAYLLTP
EYITKDAEKRLDAIAAADELGAGFTLAMQDLEIRGAGEILGEGQSGEMIQ
VGFTLYTEMLKQAVRDLKKGRQPDLDAPLGITTEIKLHSPALLPEDYCPD
IHERLVLYKRLAVCETVQQINTIHEELVDRFGLPEQPVKTLIESHHLRLM
AKELGIDAIDAAGEAVTVTFGKNNNVDPTEIILLIQNDKKYRLAGADKLR
FTAEMENIEVRINTVKNVLKTLQNRCLPK
>NMB1442 mutL, mismatch repair protein MutL
MSRIAALPDHLVNQIAAGEVVERPANALKEIVENSIDAGATAIEVELAGG
GIRLIRVSDNGGGIHPDDIELALHRHATSKIKTLNDLEHVASMGFRGEGL
ASIASVSRLTLTSRQNDSSHATQVKAEDGKLSSPTAAAHPVGTTIEAAEL
FFNTPARRKFLKSENTEYAHCATMLERLALAHPHIAFSLKRDGKQVFKLP
AQSLHERIAAIVGEDFQTASLGIDSGNGALRLYGAIAKPTFAKGKTDKQY
CFVNHRFVRDKVMLHAVKQAYRDVLHNALTPAFVLFLDLPPEAVDVNVHP
TKTEIRFRDSQQVHQLVFHTLNKALADTRANLTESVGNAGEVLHDITGVV
STPMPSENDSENLFDSVSNYPTGNKSDTHNAFGSSGKTAPMPYQSAYAPQ
QRSLSLRESRAAMNTYAELYKKTDDIDLELSRFEQARFGNMPSETPAPQT
DTPLSDGIPSQSELPPLGFAIAQLLGIYILAQAEDSLLLIDMHAAAERVN
YEKMKRQRQENGNLQSQRLLIPVTFAASHEECAALADYAETLAGFGLELS
DMGGNTLAVRAVPAMLGKADVVSLAKDVLNELAQVGSSQTIEEHENRILA
TMSCHGSIRAGRRLTLPEMNALLRDMENTPRSNQCNHGRPTWVKLTLKEL
DALFLRGQ
>NMB1295 mutM, formamidopyrimidine-DNA glycosylase
MPELPEVETTLRGIAPHIEGKTVEAVVLRQLKLRWQINPDLGEILSGRQV
LSCGRRAKYLLIRFQTGVLLIHLGMSGSLRIFTPSDGRIGRPDRHDHVDI
VFSDGTVMRYRDPRKFGAILWYEGIEEHHPLLEKLGPEPLSEAFCADYLY
ARLKAQKRAVKLALMDNAVVVGVGNIYANESLFRAGISPHRPANRLKKKE
CALLVETVKAVLQRAIETGGSTLRDFVDSDGKSGYFQQEYTVYGRHNQPC
PRCGGLVVKETLGQRGTFYCPNCQK
>NMB2160 mutS, DNA mismatch repair protein MutS
MSKSAVSPMMQQYLGIKAQHTDKLVFYRMGDFYEMFFDDAVEAAKLLDIT
LTTRGQVDGEPVKMAGVPFHAAEQYLARLVKLGKSVAICEQVGEVGAGKG
PVERKVVRIVTPGTLTDSALLEDKETNRIVAVSPDKKYIGLAWASLQSGE
FKTKLTTVDKLDDELARLQAAEILLPDSKNAPQLQTASGVTRLNAWQFAA
DAGEKLLTEYFGCQDLRGFGLDGKEHAVAIGAAGALLNYIRLTQNLMPQH
LDGLSLETDSQYIGMDAATRRNLEITQTLSGKKSPTLMSTLDLCATHMGS
RLLALWLHHPLRNRAHIRARQEAVAALESQYKPLQCRLKSIADIERIAAR
IAVGNARPRDLAALRDSLFALSEIELSAECSSLLGTLKAVFPENLSTAEQ
LRQAILPEPSVWLKDGNVINHGFHPELDELRRIQNHGDEFLLDLEAKERE
RTGLSTLKVEFNRVHGFYIELSKTQAEQAPADYQRRQTLKNAERFITPEL
KAFEDKVLTAQEQALALEKQLFDGVLKNLQTALPQLQKAAKAAAALDVLS
TFSALAKERNFVRPEFADYPVIHIENGRHPVVEQQVRHFTANHTDLDHKH
RLMLLTGPNMGGKSTYMRQVALIVLLAHTGCFVPADAATIGPIDQIFTRI
GASDDLASNRSTFMVEMSETAYILHHATEQSLVLMDEVGRGTSTFDGLAL
AHAVAEHLLQKNKSFSLFATHYFELTYLPEAHTAAVNMHLSALEQGQDIV
FLHQIQPGPAGKSYGIAVAKLAGLPVRALKSAQKHLNGLENQAAANRPQL
DIFSTMPSEKGDEPNVGNFVDKAEEKHFEGILAAALEKLDPDSLTPREAL
SELYRLKDLCKSVS
>NMB0453 mutT, mutT protein
MIQDTRPLIRVVAGILLDSDGNYLLSSRPEGKPYAGYWEFAGGKVEAGET
DFQALQREFEEELGIRILAATPWLTKIHSYEHARVCLKFLWVNPDQWTGK
PQSREGQEWSWQKAGDFTVAPMLPANGALLRSLSVPRRLYGSLKTGLHGE
NSMGAYRVLPLGSAEGSGANVLMEAAQWQDRPEHADSVWMVVQTREQWRR
AQEKGADAVVWRVCDDVQAQEAAEALRQGVSVPLVLAANGQTVARYGKLW
LGLGAHVVVRDETIGKNHE
>NMB1396 mutY, A/G-specific adenine glycosylase
MILMNTPIPFSERLIRWQKQHGRHHLPWQVKNPYCVWLSEIMLQQTQVAT
VLDYYPRFLEKFPTVQTLAAAPQDEVLSLWAGLGYYSRARNLHKAAQQVV
RQFGGTFPSERKDLETLCGVGRSTAAAICAFSFNRRETILDGNVKRVLCR
VFARDGNPQDKKFENSLWTLAESLLPSENADMPAYTQGLMDLGATVCKRT
KPLCHQCPMADICEAKKQNRTAELPRKKTAAEVPTLPLYWLIVRNRDGAI
LLEKRPAKGIWGGLYCVPCFESLNGLSDFAAKFSLTMADMDEQTALTHRL
THRLLLITPFEAQMPSESPSDGIWIKPAHLKDYGLPKPLEIYLNGNRLE
>NMB0533 nth, endonuclease III
MNRHIRQEIFERFRAANPHPTTELNFNSPFELLIAVLLSAQATDVGVNKA
TAKLFPVADTPQAMLDLGLDGVMEYTKTIGLYKTKSKHIMQTCRILLEKY
NGEVPEDREALESLPGVGRKTANVVLNTAFGHPVMAVDTHIFRVSNRTKI
APGKDVREVEDKLMRFIPKEFLMDAHHWLILHGRYTCKALKPQCQTCIIN
DLCEYPAKA
>NMB0642 ntpA, dATP pyrophosphohydrolase
MPMAKPLKYPVSALVVLYSGDGGILLIERTHPEGFWQSVTGSLEPGETVA
QTARREVWEETGILLADGQLQDWHDSTVYEIYHHWRHRYPKGVFENREHL
FSAEIPRDTPIALQPEEHVSYGWFDMEEAAEKVFSPSNRRAILELGRFLG
KR
>NMB1605 parC, topoisomerase IV subunit A
MNTQAHAPHTDSNTLMLGRYAERAYLEYAMSVVKGRALPEVSDGQKPVQR
RILFAMRDMGLTAGAKPVKSARVVGEILGKYHPHGDSSAYEAMVRMAQDF
TLRYPLIDGIGNFGSRDGDGAAAMRYTEARLTPIAELLLSEINQGTVDFV
PNYDGAFDEPLHLPARLPMVLLNGASGIAVGMATEIPPHNLNEVTQAAIA
LLKKPTLETADLMQYIPAPDFAGGGQIITPADELRRIYETGKGSVRVRAR
YEIEKLARGQWRVIVTELPPNANSAKILAEIEEQTNPKPKAGKKQLNQDQ
LNTKKLMLDLIDRVRDESDGEHPVRLVFEPKSSRIDTDTFINTLMAQTSL
EGNVSMNLVMMGLDNRPAQKNLKTILQEWLDFRTVTVTRRLKFRLNQVEK
RLHILEGRLKVFLHIDEVIKVIRESDDPKADLMAAFGLTEIQAEDILEIR
LRQLARLEGFKLEKELNELREEQGRLNILLSDENEKRKLIVKEMQADMKQ
YGDARRTLVEEAGRAVLTQTTADEPITLILSEKGWIRSRAGHNLDLSQTA
FKEGDCLKQTLEGRTVLPVVILDSSGRTYTLDAAEIPGGRGDGVPVSSLI
ELQNGAKPVAMLTGLPEQHYLLSSSSGYGFITKLGDMVGRVKAGKVVMTA
DSGETVLPPVAVYASSFINPDCKIIAATSQNRALAFPIGELKIMAKGKGL
QIIGLNAGESMTHTAVSSELEILIESEGRRGAAHKDRIPISLLEAKRGKK
GRLLPISGSLKQLSSPK
>NMB1682 parE, topoisomerase IV subunit B
MAKNNQYSESSITVLKGLEPVKERPGMYTRTDSPTHICQEVIDNASDEAL
GGFATAIDVQIHEDGSLSVHDNGRGIPVGLHPEEGVSVVELVFTRLHAGG
KFNKKDGGSAYAFSGGLHGVGVSVTNALSTRLEVTVKREGKIHRIVFAGG
DVVEPLAQVGKCAVKDSGTEVRVWPDGKYFESPNYSIPELERLLRAKAVL
LPGVRVSLTRPVKGEDEAHTQTWHYPDGLKSYLTDLIADAQEAVPLFSCE
NYISDEHNGDFSIGEGAAFALTWLEEGSCANESYVNLIPTPLGGTHEAGL
KQAVFNAVNNFINLHNLLPRGVKVQSDDVFGKTAFVLSARVLDPQFQGQT
KDKLTNRDALKLVATVSGDPLELWLNQNVDFGKKIAELAIRQAQARMRSV
KKIEKKKGSGVAVLPGKLTDCESEDIRENELFLVEGDSAGGSAKLARDKA
TQAILPLRGKVLNSFEVHPDQLFGNAEIHDISVAIGVDPHGINDHPDLSG
LRYGKIAILSDADVDGSHIQVLLLTLFYRHFPKLVADGHIYVAQPPLFRV
DVNAQGKSKPARKFYALDQNELDSILERLQKEGVKETAYSISRFKGLGEM
NPDQLKDTTMHPDTRRLLQVQIPEGADDETRDIFVKLMGKGEAAARRAWM
EREGDTAELDI
>NMB1552 pivNM-1A, pilin gene inverting protein PivNM-1A
MNIIGLDISKDTIDATLHKTNGSIHYIKFKNNDDGLKQFRLWIKGNRIRK
VYIGMEATGIYYEKAADMLSSYYTVYVINPLKIKDYGKSRFNRTKTDKAD
SNLIADYIKRHQDTLIPYQIPKNKALQKLINLKNQLHQHQKQIKNRLHST
EEDFIRNIHQDLIDTIQDKMEQVKIAISEQIKKQTDNNHYRNLQTIPSIG
KDTASVLYAQLTEKHFKTANQFVSYAGLNPAIIQSGTSVRGRGRLSRYGN
RRLKSTLYMPALCAYRFNAFPKLINNLKKAGKPKMVIIVAIMRKLAKLAY
YIVKTGQPYDAERHRLNQ
>NMB1625 pivNM-1B, pilin gene inverting protein PivNM-1B
MNIIGLDISKDTIDATLHKTNGSIHYIKFKNNDDGLKQFRLWIKGNRIRK
VYIGMEATGIYYEKAADMLSSYYTVYVINPLKIKDYGKSRFNRTKTDKAD
SNLIADYIKRHQDTLIPYQIPKNKALQKLINLKNQLHQHQKQIKNRLHST
EEDFIRNIHQDLIDTIQDKMEQVKIAISEQIKKQTDNNHYRNLQTIPSIG
KDTASVLYAQLTEKHFKTANQFVSYAGLNPAIIQSGTSVRGRGRLSRYGN
RRLKSTLYMPALCAYRFNAFPKLINNLKKAGKPKMVIIVAIMRKLAKLAY
YIVKTGQPYDAERHRLNQ
>NMB1750 pivNM-2, pilin gene inverting protein PivNM-2
MYLGIDVSKLTIDCCLIVDGQNYQKKFQNNKGGFEQLINWLQSHKVNDKL
HCVCEATGTYYEALAEYLYSRYTITVENPRKIKGYAIAELQRSKTDTQDA
KLIAQYCQDRKHKLKAWKPPTKEQKQLQEIARYLDYLKQQRATEKAKQHE
APDYIKSHIQTTISNLTAQIQIVKKQLLQFYKDNPSYNNLRKRLKTITGI
GEQATAVLLSTYKRHEFKNARQFTAYLGLDPRKFQSGTSVNGKSRISKIG
SSEIRKSLYMPALVAYRCNAFPEFVGRLKNKGKHIKLILIAIMRKLAVIA
FTILQNGQDFQVERYK
>NMB1982 polA, DNA polymerase I
MSNRPTLLLVDGSSYLYRAYHAMGQNLTAPDGAPTGALYGVLNMLRRLRS
EYPHDYCAVVFDAKGKNFRHQMFEEYKATRPPMPDDLRPQAEALPDLVRL
TGWPVLVIGQVEADDVIGTLAKQGAEHGLRVIVSTGDKDMAQLVDERVTL
VNTMSSETLDIEGVKAKFGVRPDQIRDYLALMGDKVDNVPGVEKCGPKTA
VKWLEAYGSLAGVMEHASEIKGKVGENLQAALPQLPLSYDLVTIKTDVDL
HAELSDGIESLRRTTPKWAQLVVDFKRWGFRTWLKEAESNMNTGSTDDLF
GSDSIGEQAALNAEMPFEKQAEKATAPEKLDYQAVTTEAQFAALLDKLSR
ADTIGIDTETTSLDAMNASLVGISIAFQAGEAVYIPVGHSLTAAPEQLDL
QDVLGRLKPHLGNPALKKIGQNLKYDQHVFANYGIALNGIAGDAMLASYI
IESHLGHGLDELSERWLGLETITYESLCGKGAKQIGFADVAIGQATEYAA
QDADFALRLEAHLRAQMDEKQLEMYEKMELPVAQVLFEMERNGVQIDRAE
LARQSAELGAELMKLEQEAYAAAGQPFNLNSPKQLQEILFDKMGIPTKGL
KKTAKGGISTNEAVLEQLAPDYPLPKIILQNRSLAKLKSTYTDKLPEMIS
PKDGRVHTTYAQAVAITGRLASNNPNLQNIPIRTEEGRKVRRAFTAPQGS
VIVSADYSQIELRIMAHLSGDKTLIAAFQNGEDVHRRTAAEVFGTAPENV
SSEQRRYAKSINFGLIYGMGQYGLAKSLGIDNLSAKNFIDRYFARYPGVA
EYMQRTKEQAAAQGYVETLFGRRLYLPDIRNKNANARAGAERAAINAPMQ
GTASDLIKRAMIDVSRWLSECEASPWDELLQSKLIMQVHDELVLEVVETE
LDFVKEKLPQIMAKVDGGLLDVPLVAEVGVGENWEEAH
>NMB0551 priA, primosomal protein n`
MIYHRIAVNVPLSDGLLTYSHSDPLPPGTRVLVPFRNKTVVGMVWETDIA
PDMDMARILSVQTAFVEEKPLPESWRDLLAFTSRYYHYPTGQAVFAALPQ
GLKETRAVEMPQPPLFYALNEAGRAQTPPPARFNKKAALWDALLSGGMTM
AALKQVNAQAAKLIEDWAEQGWIETTEAAKPVLRSYHGQASHSEFVLNAD
QQQASDEIQTAFGSFQPFLLYGITGSGKTEVYFDAMAKVLAQGRQVLFLL
PEINLTPQLLKRVENRFADVPTAVLHSQMAAGKRTQDYLRAMLGQAKLVI
GTRLAVFTPMDDVGLIVVDEEHDGSFKQDNELRYHARDLAVWRAKQGGCP
IILGSATPSLESWHKAQSGAYRLLQLTERAHTAAQLPQVDILNVGRLKLD
NGFSPQALQLLKQNFEAGGMSLVYLNRRGFAPALFCGDCGYTFGCPNCSA
KMVLHQRARQLRCHHCDHREPIPYKCPDCGNQDLTAVGHGTQRVEETLRT
FLPKAAVVRVDRDSTAHKNDWADLYRRIADNKIDILVGTQMLAKGHDFAR
LNLVIVLNADGSLYSADFRAPERLFAELMQVSGRAGRADKPGKVLIQTQL
PEHPVFAAVKAQDYAVFAENELNERQMFAMPPFGFQTAVRADAPRVADAM
EFLNAAKETLAPLLPESVSQFGAAPMLMVRLAERERAQIFLESPSRQDLH
RAVSLWAQVLQQNRDGKIRWSVDVDPQEA
>NMB1038 radC, DNA repair protein RadC
MSIKQWPEGERPREKLLERGAAALSDAELLAILLRVGTRGMSAVDLARYL
LQEFGSLGRLMSAEVGKLSAYKGMGTASFTQFAVVREIGRRILAEELQES
IVLSDPDTVADYLRFHLGQEKVEVSVALLLNRQNQLIAVRELSRGTVAEN
TIYIREIVKLALDEYADSLIIAHNHPGGSPEPSQEDIMFTRRLAQAMSLV
DVSLLDHFIVTSQSVCSFRQLGLMP
>NMB0851 rdgC, recombination associated protein RdgC
MWFKQISFYPLNKEKLPEADVLADKLAEAEFTHCQGLDWFSEGFTAPVSF
SPELVFPADFTLRVALKKEEKVLPAGVIRDILEEKVAEIQNNEARNVGRK
EKQELKEQITDDLLPRAFTRSSRTEAVFNTRHGYLLVNNAASAKAENILT
KLREALGGLEASLPNTKQSPSSLMTGWLLQGHCEGGFELDSDCELKGTGD
IVPVVKVSKQDLTADEVVQHVKNGKTVTQLGLVWREQIAFILTQDFTLKR
IQYLDVLQEEAESNGDDAAGLAFASQILMAESVSTMLEELVSYLGGWQD
>NMB1445 recA, recA protein
MSDDKSKALAAALAQIEKSFGKGAIMKMDGSQQEENLEVISTGSLGLDLA
LGVGGLPRGRIVEIFGPESSGKTTLCLEAVAQCQKNGGVCAFVDAEHAFD
PVYARKLGVKVEELYLSQPDTGEQALEICDTLVRSGGIDMVVVDSVAALV
PKAEIEGDMGDSHVGLQARLMSQALRKLTGHIKKTNTLVVFINQIRMKIG
VMFGSPETTTGGNALKFYSSVRLDIRRTGSIKKGEEVLGNETRVKVIKNK
VAPPFRQAEFDILYGEGISWEGELIDIGVKNDIINKSGAWYSYNGAKIGQ
GKDNVRVWLKENPEVANEIDAKIRALNGVEMHITEGTQDETDGERPEE
>NMB0785 recB, exodeoxyribonuclease V 135 KD polypeptide
MSASIQAFDPLTVPISGTNLIEASAGTGKTYGIAALFTRLIVLEQKNVER
VLVVTFTKAATAELKTRLRGRLDDVLQVLESKGIAKLGDDTLSDGIAAYC
AEHHEGDTFLPELLKQALQKEGRTRLIVRLKAAIGQFDNAAIYTIHGFCQ
RILRDYAFLCQAPFDVEMTEEDGDRLLIPAQDFWRERVSNDPVLAALALK
RKAVPQTVLAQISRYLSRPYLNFRRPQADLKQAQRNAETSWQTICRLLPE
LEAGFWRIHPDLNGNSYRKNSFGNLFKELAQKSAAGQLPFLDKDTHDRLL
KLASDKLEAGLKKGKTPDAAVFAELQKLADFGRDLNALEEAEEATMIRLQ
LDLIEYLNRSLAEMKKSRRERGFDDLLLDVHTALTDNPHADTLARAVAEN
WETALIDEFQDTDPLQYEIFQKIFIAQNRPLFLVGDPKQAIYSFRGADIY
AYLQAAEDARHRYTLATNYRSHAALIGSIGALFRLKERPFVLENIGYSEV
GAARAESRLSPERPAVQVRWLHENDNEKANKDVLRRRAADYCADEIAHAL
NEAARGRLNFKGCPLQSGDIAVLVRTHNEAVMVSAALKKRQVQSVLLSRE
SVFASPEAAALSALIGFWLEPRRAGTLRFVLTSSIFGYDAQQLHDFNQNE
SEILHWAESARTALDNWNKYGIFAAMQQFSQTHGIETRLLSRNNGRSLTN
YFQLLELLAAEDAQNRNPAALHKWLGDQISLAENNSGDNRAIRLESDEDL
VKIVTMHASKGLQYPLVYCPFAWDAQDTGPSDWQILHQGANRTELLAKAQ
LSEDEQKQYADEEMAERLRLLYVALTRAEEQLNIYAAYSTNTADNPLAYL
IEGSPQDSRETVRRAYACEKDGIAMLKRNWRRVADNAPSGTNFAFTENAP
PPAAYRSNAGQTAEFAANSIPERGFRFVRHTSFTALSRHTQTPDGGEEDA
CPSLDAAETSVPAMPSETPTASDGISIHDFPKGTQAGLCLHEILEDFKFG
QAAAGQETLIADKLKKYGFEEIWLPAVAEMAEACRKTPLTGAYDLSDISP
ECRCPEMGFTLHTEDFSLKRLRDWFARDDIRLPEVCRAAAETLDFHTVNG
FLNGFVDMVCQDPDGNICVIDYKSNHLGTDASAYTQQAMDEAVAHHHYYL
QALIYAVAAARYFKLRGQPPAAVSVRYLFLRGLDGKGGGVWRWDIDAAAL
EQIK
>NMB1720 recC, exodeoxyribonuclease V 125 kD polypeptide
MFYLYQSNRLETLAALFARIQKVKPLKSALQPEQIIVQSQGMRRYLNTCL
ARDLGVAANLSFSLPAGLTWKLMKKLIPGIPELSPFAPEVMRWRLLDLFR
SEAFRNTAEFEDVRNVLQDYLGSGESADYQLAGQLADIFDQYLVYRPQWI
DAWQQGRRLGLGDDEIWQSKLWRYLDDGRQSAPHRVALWEKLLESLSSDK
LPERYFVFGISTMAPMYLQLLHKLSEHCDVFVFALNPSGMYWGNVIEAAQ
ILKGGGDPDLTQAGHPLLASLGKQGRDFFDFLNEMEIEGETPVFEEGGRD
TLLHALQTDIQNLKMPSEMAGSVNTGDGSIRIVSAHSPLRELQILKDKLL
KILHEHPDWQPHDIAVLTPNIESYTPFIEAVFGQAQPGAQALPYSVSDVK
ISRRQPLFHALSCLFDLLESRFEVDKVLVLLETAPVLRRFGLTEDDLPLL
HDMVADLNVHWGLDGEMRGGTDQLFTWKQAVERMILGWMLPKGGNPMWQD
VSAWYADVNQTAMFGRFAAFLETLTDIVRIWRQPATVGEWVARCRDLLET
LFQAEADDQKSVQNLENEWVKWQAETELAQFSGQLPPHTVIRHIRRFLDS
ESEAGFLRGGITFCSMVPMRSLPFKVICLLGLNDGDFPRNTKAAVFDLIA
KHPAKGDRARRDDDRYLFLEALISAREILYLSYIGRDIRKDEELAPSSLL
GELIDTVAAMAGIGSRQLAQNLIEQHPLQAFSRRYFQEGGRSDGIFGTRT
DYAAALGQTPEPPQPFFDQPVENAEPVAEIGQDEFIRFWRNPVKVWLQQQ
LAWSEPHIGEAWEPAEPFEPQHADQIAEIYIEARCEGRDFAQTAARIGAE
SLLPSGELGRLWQQDFQTAAKQIDTAVLNSPKLPPLSYAIPSDGQILKGS
LGNLYRCGQVFYAYGKPNAPQRIAFLLEHLIFCAVMPSEAEMRQTFIVQS
GETEILAEIAQDRALQLLSEWMAFFNIGQNRPLPFFAKTSLATAEAFAQK
QDWEAALKKAQTAYHGSKVSKGQKDYTEVALVFGNASQNPLEQPLFENLV
RLLADTLAAAEKKEEAGEA
>NMB1233 recD, exodeoxyribonuclease V, alpha subunit
MERQTDEFAQAAARAAIRFLEHYAGSGDEVLANCTERLFQALQNGHSFIR
LSGGEADALSALAPVVGTSAAPLILEGRRLFLGRMWQLEYDLAAEIKRLA
AAGTSAPDAAGARQNLAKWFQGTGSEGQRDAAALALLQSFMVITGGPGTG
KTTTVAKLLALICGEDENLPNIALAAPTGKAAAHMARALHRAINGFDAPE
AVRRHLLKLEGQTVHRLLKLRPPKMQAAFNPVYPLPFDVLVIDEASMLDT
ALMLQLLKAVKTGARVILLGDENQLPSVGIGAVLSVLSQKTVLDGETHQR
LAGFLPEHGFSVSANPPVLAQNTAHLSFSHRFGDNSGIGCLARAAVSGDE
GAWALFDRFPDELEHSECSPNARVERLYRAHKAYWQAVKDGNIEAAYAGI
SDIVVLAAWRQDAEDFNEAYCRHVRRKMNIPEHLAYFAGEPIMIRQNDYA
LELFNGDIGLIMEDVGRQGSLAAYFADADGFKKVAVSCLPEFEPAFAMTV
HKSQGSEYREVWLLPPSAAPSDEGDDALSGLSKELLYTAITRAREKFVFF
GGEEAFRQAAATVKTRQTALGSMLERVFSQE
>NMB1788 recG, ATP-dependent DNA helicase RecG
MMSPETRKQLKITDVSAKKLDKLNLHTAWDLVLHLPLRYEDETHIMPIKD
APIGVPCQVEGEVIHQEVTFKPRKQLIVQIADGSGSVLFLRFIHFYASHQ
KQTAVGKRIRAVGEIKHGFYGDEMIHPKIRDAEGGGLAESLTPVYPTVNG
LNQPTLRRIIQTALDVTPLHDTLPDALLCRLKLPHLAESLRLLHSPPPSF
TIHQLSDGTLPAWQRLKFDELLAQQLSMRLARQKRIGGTAAALGGDGTLT
QALRQALPFALTDAQEKVVSEICRDMAQTYPMHRLLQGDVGSGKTIVAAL
SALTAIESGAQVAVMAPTEILAEQHFIKFKQWLEPLGIEVVRLFGSLRKK
AKDEAKAKLADGSVKIAVGTHALFSDGVAFHNLGLTIVDEQHRFGVAQRL
ALKNKGREVHQLMMSATPIPRTLAMSFFADLDVSVIDELPPGRTPIKTRL
VNNVRRAEVEGFVLGTCRKGRQAYWVCPLIEESETLQLQTAAETLARLQT
ALPELNIGLVHGRMKAAEKAEVMARFSSGGLNVLVATTVIEVGVDVPNAA
LMVIEHAERMGLAQLHQLRGRVGRGAAESVCVLLFAEPLGELAKARLKVI
YEHTDGFEIARQDLNIRGPGEFLGARQSGVPMLRFAKLEEDLHLLEQARE
TAPMLIEQNPEIVEAHLARWLSGREGYLGV
>NMB0842 recJ, single-stranded-DNA-specific exonuclease RecJ
MSVKIQTRSVNTDVFNHLLTAGADPLIAQLCASRGVQSPAELDDKLASLL
PYQSLTNCEAAARRLADAVGRKEKILIVADYDADGATACAVGMSGLAAMG
AKVDFLVPNRFEHGYGLTPELAEIAAAQGVDLLITVDNGIASIAGVARAQ
ALGLDVIVTDHHLPAETVPDCIIVNPNQKGCGFPSKSLAGVGVIFYVLMA
LRAELRRRNYFSDGIKEPNLGELLDLVALGTVADVVPLDHNNRILVSQGL
KRMRSGKMRPGIRALFEVARRDWRKAQPFDMGFALGPRINAAGRLDDMSV
GIACLLARDDSEAQELAAQLNNLNIERREIEQSMLQDALNDFPETLPSGQ
MTLVAYRDDFHQGVVGIVASRLKDRFYRPTIVFAPADNGEVRGSGRSIPN
LHLRDALDLVSKRHPDLILKFGGHAMAAGLSILEHNIPAFQTTFEEAVRE
MVCEDDLSQTFITDGSLPACDITLEQAQNLARHVWGQGFAPPSFTDEFHV
VRQQPLGAEGKHKKVWLQKDGCEFEAMFWRCSEDIPEYIRTVYRPVANEW
RNNLELQLYIDYWEAA
>NMB0740 recN, DNA repair protein RecN
MLLTLSLRDFVIVENLNLDFQSGFTVLTGETGAGKSITLDAIGLLLGDKA
DYSQVRSGAKEAQLSALFDISHLPVLKAELYEQGLLNDGEEELSIRRIID
AKGKSRSFINNQAATLAQLKAVGSQLIDIHGQNAHHSLNQEAAQRELLDA
FAGSREQAETVRQLYQNWANAKKALQEAQEHADAVIIERERLEWQFNELN
QLDIKQGEWEALSQSHDSLAHSAELLQAAEEVGSKIDGDNGIQRHIYQCQ
KLLANLQNIEPRFAESLNMLASIEAELGEISANMRDVAGRSDINPNELAA
QEQRMGELMGMARKYRIEPEELPAKLAEIEERLQSLQAAADLDALEHNVA
HNFAEYQEAAHILSAMRHQAAERLSGETTEHMQHLAMKGARFDIVLLPSS
PTAHGLEQVQFQVAANKGNPPRLLNKVASGGELARISLALQVVASQYTQV
PTLIFDEVDTGIGGGVAEMVGKALRALGRKHQVLAVTHLPQVASCGENHW
RVRKHSEGEQTVSEISILDEIQRIEEVARMLGGEVITDTTRQHAAELLQL
ASKNSLF
>NMB0447 recO, DNA repair protein RecO
MSEYRVNHEPVFMLASSPWRESSLWVEAFSRRYGRVALLARSARKRQSEL
RGVLVPFVPVSVSWYGSQELKTLHRAEWVGGWRQPQGRALFGGLYVNELV
LKLTAREDPVPELYDALAEVMEAVCCKAAYIDDLRRFEWRLLNLLGVAPD
LNRDGDGGTIAAGGTYLVRPETAVFPVGKGFAVPPHAAGVVAPGQSLIDL
REGSFRTAESLQQALKITRLFIRHLLPEGLKSRQVLEQIRQFDRKETARE
TVPTSDGTASNAV
>NMB0274 recQ, ATP-dependent DNA helicase RecQ
MHRPTAKQILHEVFGYPEFRGRQEAVINTLAGGGSLTVLMPTGGGKSLCY
QIPALMREGVAVVVSPLIALMNDQVANLHAAGIEAAAVNSGTSADEAREI
ADRLAQGRLKLLYVAPERLVTDRFLRFLDQQTVSLFAIDEAHCVSQWGHD
FRPEYQQLGMLAERYPNVPRIALTATADAATRADIKHYLHLDDAPEFVSS
FDRPNIYYQVIEKNNGKKQLLDFIRKEMTGQSGIVYCLSRKKVEDVAQFL
RENGLNAIPYHAGLSMDVREENQRRFTHEDNIIVVATVAFGMGIDKPDVR
FVAHLDMPQSVEHFYQESGRAGRDGLPAASWLCYGLNDWVLLRERIAEGN
SDEVQKQIEMQKLDAMLAVCETAACRRVLLLKHFGEASEPCGHCDNCLHP
PVRFDGTVLVQKLLSCVYRAGQRFAAGYITNILRGKSDDWIRGNRHEQLS
TFGIGTELSDKEWRSVIRQCISLGYLTVNITRYQALQLTEAAKKVLKGET
EVMLRPLKRDKPAARTLKDNWLRTEREERLWQALRVWRMKQAEAEGIPAY
MIFGDKTLRDLVEKMPQDLNGLHDIYGLGEAKIDRFGHGILEVCRNAAGF
SRDAVIRPQTEREQQLRQKLEAWRYEQARAENCALHAVLSDESLADMLAD
TPETETDLEGVYGLGSVRAAKYGRDILAVCRPFSDGIDETAKRKRRLMRA
LIQWCGETAKHEQSEPYRILSKAALRAIAAKQPEGLAELAAVYGVGEEKA
ARYGAAVLAVLERNAV
>NMB1237 recR, recombination protein RecR
MMSHKKQDAFQGLIDALKVLPNVGPKSAQRIAYHLLQHKRKEAEKLVDAL
QTALKQVYHCAMCNTFCEGGLCDICADETRDGRRLMVVHMPADVSNMEAA
NCHDGLYFVLMGQINTALGMDVSAIALDRLAQRLGGGEVEEIIIATAFTA
EGNATAYVLSEFFKNLPYKVSRLSQGIPLGGELEYVDAGTLAQAVYERRL
IKEGGA
>NMB1447 rep, ATP-dependent DNA helicase
MMKLNPQQLEAVRYLGGPLLVLAGAGSGKTGVITQKIKHLIVNVGYLPHT
VAAITFTNKAAAEMQERVAKMLPKPQTRGLTICTFHSLGMKILREEANHI
GYKKNFSILDSTDSAKIIGELLGGTGKEAVFKAQHQISLWKNDLKTPEDV
VQTASNIWEQQTARVYASYQETLQSYQAVDFDDLIRLPAVLLQQNSEVRN
KWQRRLRYLLVDECQDTNTCQFTLMKLLTGAEGMFTAVGDDDQSIYAWRG
ANMENLRKMQENYPQMKVIKLEQNYRSTARILKIANKVIENNPKLFTKKL
WSQLGEGEPVKVVACQNEQHEADWVVSQIVKQKLIGGDKTQYADFAVLYR
GKHQARIFEEALRGARIPYQLSGGQSFFDKAEIKDVLSYVRLLANPNDDP
AFLRAVTTPKRGIGDVTLGKLNTYAHEHECSLYEAAQNEEALATLNNTNR
QHLQTFMDMFVSYLAKAETSEAGEFINSLLEEIDYENHLMQNEEGKAGEI
KWRNVGDLVSWFARKGGEDGKNIIELAQTVALMTLLEGKDEEETDAVSLS
TLHAAKGLEYPYVFLVGCEEGVLPHNDSIEEGNVEEERRLMYVGITRAKR
QLTLTHCVKRKKQGTWQFPEPSRFIDEMPQEDLKILGRKGGEPIVSKEEG
RRNLADIIGRLDNLKKSGAAD
>NMB1618 rnhA, ribonuclease HI
MNQTVYLYTDGACKGNPGAGGWGVLMRYGSHEKELFGGEAQTTNNRMELT
AVIEGLKSLKRRCTVIICTDSQYVKNGMENWIHGWKRNGWKTASKQPVKN
DDLWKELDALVGRHQVSWTWVKGHAGHAENERADDLANRGAAQFS
>NMB0192 rnhB, ribonuclease HII
MHILTAGVDEAGRGPLVGSVFAAAVILPETFDLPGLTDSKKLSEKKRDAL
AEMIKNQAVEWHVAAASPEEIASLNILHATMLAMKRAVDGLAVRPEKIFI
DGNRIPEHLNIPAEAVVKGDSKIIEISAASVLAKTARDAEMYALAQRHPQ
YGFDKHKGYGTKQHLEALEKYGVLPEHRRDFAPVRNLLAQQALF
>NMB0265 ruvA, Holliday junction DNA helicase RuvA
MISRLTGKLVEKNPPQIVIDVNGVGYEADVSMQTFYNLPPVGESVQLFTQ
LIIREDAHLLFGFATAEERKTFRQLIKVGGIGAKTALGILSAMTADELAR
AVAEEDVKRLSSAPGIGKKTAERMVLELRGKLVAHTVTDGLFAAAPAADE
TEDIVSTLLALGYSEREAKAAVKGVPEGTDVGEGVRLALKNLLK
>NMB1243 ruvB, Holliday junction DNA helicase RuvB
MLQTDNLTAAQPQRIVAAQTASAQEELLERALRPKTLDDYIGQDKAKEQL
AIFIQAAKKRGEALDHVLLFGPPGLGKTTLAHIIAKELGVNLRQTSGPVL
ERAGDLAALLTNLDPHDVLFIDEIHRLSPVVEEILYPALEDYRLDIMIGE
GPAARSVKIDLPPFTLIGATTRAGMLTNPLRDRFGIVSRLEFYENRDLTT
IVSRSAQLLQLDMSEEGAEEIAKRSRGTPRIANRLLRRVRDFADVKNNGT
IDGGIADAALSMLDVDAQGLDVMDRKFLEAVLHKFGGGPVGLDNVAAAIG
ESTDTIEDVIEPYLIQQGFLQRTPRGRMATERAYLHFGLPVEK
>NMB1419 ruvC, crossover junction endodeoxyribonuclease RuvC
MAASVRILGIDPGSRVTGFGVIDVRGRDHFYVASGCIKTPADAPLADRIA
VIVRHIGEVVTVYKPQQAAVEQVFVNVNPASTLMLGQARGAALAALVSHK
LPVSEYTALQVKQAVVGKGKAAKEQVQHMVVQMLGLSGTPQPDAADGLAV
ALTHALRNHGLAAKLNPSGMQVKRGRFQ
>NMB1460 ssb, single-strand binding protein
MSLNKVILIGRLGRDPEVRYMPNGEAVCNFSVATSETWNDRNGQRVERTE
WHNITMYRKLAEIAGQYLKKGGLVYLEGRIQSRKYQGKDGIERTAYDIVA
NEMKMLGGRNENSGGAPYEEGYGQSQEAYQRPAQQSRQPASDAPSHPQEA
PAAPRRQPVPAAAPVEDIDDDIPF
>NMB1673 tag, DNA-3-methyladenine glycosylase I
MNYCEFAASLPENTDNPNKHYHDTQYGFPIEDDNELFERLVLEINQAGLN
WTLMLKKRQAFQTAFEGFDIDTVAAFDDTDRERLLADAGIVRNRLKIDAA
IFNARQIQALQQEYGSFKNWLDTHHPRSKDEWVKLFKKHFKFVGGEIVGE
FLMSTGYLKGAHAESCPVYRETLKYHPKWLDAI
>NMB0118 topA, DNA topoisomerase I
MAKNLLIVESPSKAKTLKKYLGGDFEILASYGHVRDLVPKSGAVDPDNGF
AMKYQLISRNGKHVDAIVAGAKEAENIYLATDPDREGEAISWHLLEILKS
KRGLKNIKPQRVVFHEITKNAVLDAVAHPREIEMDLVDAQQARRALDYLV
GFNLSPLLWKKIRRGLSAGRVQSPALRLICERENEIRAFEAQEYWTVHLD
SHKGRSKFTAKLAQYNGAKLEQFDLPNEAAQADVLKELEGKEAVVTAIEK
KKRSRNPAAPFTTSTMQQDAVRKLGFTTDRTMRTAQQLYEGIDVGQGAIG
LITYMRTDSVNLADEALTEIRHYIENKIGKEYLPSAAKQYKTKSKNAQEA
HEAIRPTSVYRTPESVKPFLSADQFKLYQMIWQRTVACQMTPAKFDQTTV
DITVGKGVFRVTGQVQTFAGFLSVYEESSDDEEGEDSKKLPEMSEGDKLP
VDKLYGEQHFTTPPPRYNEATLVKALEEYGIGRPSTYASIISTLKDREYV
TLEQKRFMPTDTGDIVNKFLTEHFAQYVDYHFTAKLEDQLDEIADGKRQW
IPLMDKFWKPFIKQVEEKEGIERAKFTTQELDETCPKCGEHKLQIKFGKM
GRFVACAGYPECSYTRNVNETAEEAAERIAKAEAEQAELDGRECPKCGGR
LVYKYSRTGSKFIGCVNYPKCKHVEPLEKPKDTGVQCPQCKKGNLVERKS
RYGKLFYSCSTYPDCNYATWNPPVAEECLNCHWPVLTIKTTKRWGVEKVC
PQKECGWKEQIEPPAPKE
>NMB1222 ung, uracil-DNA glycosylase
MDTWHDALGGEKQQPYFQEILNAVRQERLSGQIIYPPAADVFNAFRLTAF
DRVKAVILGQDPYHGAGQAHGLAFSVRQGIRIPPSLLNIYKELETDIEGF
SIPAHGCLTAWAEQGVLLLNTVLTVRAGQAHSHALLGWERFTDTVIRQLA
THRKHLVFMLWGGYAQQKGRLIDSQNHLILTAPHPSPLSAYRGFFGCRHF
SQANSYLSRHGIDPINWKL
>NMB0962 uvrA, excinuclease ABC, subunit A
MCNHHPQHSHDNDTIRIRGARTHNLKNIDLDIPRHKLVVVTGLSGSGKSS
LAFDTLYAEGQRRYVESLSAYARQFLQMMDKPDVDLIEGLSPAISIEQKS
TSHNPRSTVGTVTEIHDYLRLLYARVGTPYCPEHKLPLSSQTVSQMVDAV
LKLPEDTRVMILAPTVRERKGEFVDFFADLQAQGFARVRVDGEVYQLDEV
PKLEKNIKHNIDVVIDRVKVKADIKQRLAESFETALRHGNERALAMEMDS
GEEHWFSARFACPVCSYSLPELEPRLFSFNNPMGSCPTCDGLGNTNFFDP
EKVVAHPELSLATGAIDGWDKRNQFYFQMIQSLARHYGFDVQAAWETLPE
KVKKVVLHGSGKEVIDFTYLSERGTTFNRSHAFEGIIPNLERRYRETDSE
TVREKLREYQNHRACPSCGGARLRKEARYVYVSGEPLHEVSAWPLTKTHQ
FFETLDLDGNKKQIAEKILKEITERLGFLINVGLDYLNLSRSAETLSGGE
AQRIRLASQIGSGLTGVMYVLDEPSIGLHQRDNDRLLATLKRLRDLGNSV
IVVEHDEDAIREADFVVDMGPGAGEHGGNVLIADTPENVAQCENSVTGQY
LSGKKSIAVPSERTPVNPDRMLVLKGARGNNLKNVTLELPLGLITCITGV
SGSGKSTLINDTLAKITARELNRAQEEPAPFDDIHGLEHLDKVINVDQSP
IGRTPRSNPATYTGLFTPIRELFAGVPLSRERGYNVGRFSFNVKGGRCEA
CQGDGVIKVEMHFLPDVYVPCEVCHGKRYNRETLEIQYKGKNISQVLDMT
VEEAREFFDAVPTVSRKLQTLMDVGLGYIRLGQSATTLSGGEAQRVKLAL
ELSKRDTGRTLYILDEPTTGLHFADIALLLEVIGRLKGKGNSIVIIEHNL
DVIKTADWIVDLGPEGGDGGGRIIAKGSPEQVAKVKGSYTGKYLKVVLR
>NMB1331 uvrB, excinuclease ABC, subunit B
MEVIQYPNSPFKLHQPFPPAGDQPTAIAGLLEGLSDGLAYQTLLGVTGSG
KTYTMANVIAQSGRPAIIMAHNKTLAAQLYAEMREFFPENAVEYFVSYYD
YYQPEAYVPSRDLFIEKDSAINEHIEQMRLSATKNLMTRNDVIIVATVSA
IYGIGDPTEYQQMVLSVKEGDTIEQRDIIATLVSMQYERGDLDFKRGSFR
VRGDVIDVYPAESSENALRISLFDDEIDRLDMFDPLSGSLIQRVGRYTVF
PSSHYVTPRDTVLRACESIKEELRERIEFFAREQRPVEQQRIEQRTRFDL
EMLYEMGFCKGIENYSRHFSGKKEGEPPPTLMDYLPDNAIMFIDESHVTV
TQIGGMYKGDASRKQNLVDYGFRLPSARDNRPLKFHEFEKVMPQTIFVSA
TPAKYEEEHAGQVVEQVVRPTGLVDPQIIIRPVATQVDDLMSEINDRIEK
GERVLVTTLTKRMAEQLTDYYSELGIKVRYLHSDIDTVERVEIIRDLRLG
LFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRSHRSLIQTIGRAARN
VNGVAILYADKITDSMKAAIDETERRREKQIKFNEEQGIVPQQIKKQVKD
IIDGVYHEEDGSKGRLKGKNKVKVGEIHNEEDAIKEIAKLEKAMQQAARD
LQFEEAAVLRDRIRDIKENLLFGAE
>NMB1326 uvrC, excinuclease ABC, subunit C
MNKETRFPEHFDIPLFLKNLPNLPGVYRFFNESGNVLYVGKAVNLKRRVS
GYFQKNDHSPRIALMVKQVHHIETTITRSESEALILENNFIKALSPKYNI
LFRDDKSYPYLMLSGHQYPQMAYYRGTLKKPNQYFGPYPNSNAVRDSIQV
LQKVFMLRTCEDSVFEHRDRPCLLYQIKRCTAPCVGHISEEDYRDSVREA
ATFLNGKTDELTRTLQHKMQTAAANLQFEEAARYRDQIQALGIMQSNQFI
DSKNPNNPNDIDLLALAVSDGLVCVHWVSIRGGRHVGDKSFFPDTKNDPE
PNGQDYAEAFVAQHYLGKSKPDIIISNFPVPDALKEALEGEHGKQMQFVT
KTIGERKVRLKMAEQNAQMAIAQRRLQQSSQQHRIDELAKILGMDSDGLN
RLECFDISHTQGEATIASCVVYDEQNIQPSQYRRYNITTAKPGDDYAAMR
EVLTRRYGKMQEAEANGETVKWPDAVLIDGGKGQIGVAVSVWEELGLHIP
LVGIAKGPERKAGMEELILPFTGEVFRLPPNSPALHLLQTVRDESHRFAI
TGHRKKRDKARVTSSLSDIPGVGSKRRQALLTRFGGLRGVIAASREDLEK
VEGISKALAETIYNHLH
>NMB0232 uvrD, DNA helicase II
MFPDQSAPNLLQGLNPEQLSAVTWPPQSALVLAGAGSGKTRVLTTRIAWL
LQSGQASVHSIMAVTFTNKAAKEMQTRLGAMIPINVRAMWLGTFHGLCHR
FLRLHHRDAGLPSSFQILDGGDQLSLIKRLLKSLNIAEEIIAPRSLQGFI
NAQKESGLRASVLSAPDPHTRRMIECYAEYDKICQREGVVDFAELMLRSY
EMLQNNEILRQHYQNRFNHILVDEFQDTNKLQYAWLKLIAGNHAAVFAVG
DDDQSIYRFRGASVGNMTALMEEFHIDAPVKLEQNYRSVGNILAAANAVI
ENNDERLGKNLRTDAEAGDKIRYYSAFTDLEEARFILDETKALEREGWDL
DEIAVLYRSNAQSRVIEQSLFRSGIPYKIYGGLRFYERQEIKHALAYLRL
AVNPDDDNALLRVINFPPRGIGARTVENLQTASNEQGITLWQAACNAGAK
AAKVVAFVRLIEALRNQVGQLSLSEIIVGILKDSGLTEHYRTQKGDNQDR
LDNLDELVNAAIEFKPEDSNFEILPENISDDPAFPILAFLSNAALESGEN
QAGAGEKAVQLMTVHAAKGLEFNAVFLTGMEEGRFPSEMSLAERGGLEEE
RRLMYVAITRARKRLYITMAQQRMLHGQTQFGIVSRFVEEIPPEVLHYLS
VKKPAYDSYGNTRQTAASKDKIIDDYKQPQTYAGFRIGQNVRHAKFGTGV
IIDAADKGESARLTINFGKQGVKELDTKFAKLEEM
>NMB1868 xerC, integrase/recombinase XerC
MGLDGLAAYLDAYLENIVREGKSEHTVAAYRRDLQELLALLEEMPSANPS
NCTRGDFVQALRRLSGRGLGERTLARKLSSWRQYCVWLVKRGLMHADPTA
DIKPPKQPERVPKALPQEWLNRMLDLPVDGGDPLAVRDHALFELMYGSGL
RVSEIHGLNADDVYLDEAWVHVIGKGRKQRQVPLVGKSVEALKNYLPLRQ
TASDGKALFTGRNGTRLSQRQIQKRLAQWAAQNGDGRHVSPHMMRHSYAG
HLLQASRDIRAVQELLGHSSLSTTQIYTKLDFDHIARLYDEAHPRAKRQD
E
>NMB0751 xerD, integrase/recombinase XerD
MEEGLIDRLLETLWLDRRLSQNTLNGYRRDLEKIARRLSQSGRMLKDADE
ADLAAAVYVDGEQRSSQARALSACKRLYIWMEREGIRTDNPTRLLKPPKI
DKNIPTLITEQQISRLLAAPDTDTPHGLRDKALLELMYATGLRVSEAVGL
NFGNVDLDRGCITALGKGDKQRMVPMGQESAYWVERYYTEARPLLLKGRN
CDALFVSQKKTGISRQLAWMIVKEYASQAGIGHISPHSLRHAFATHLVRH
GLDLRVVQDMLGHADLNTTQIYTHVANVWLQGVVKEHHSRN
>NMB1363 xseA, exodeoxyribonuclease, large subunit
MSDFFHSDVLSVSELNAFAKSLLENHLAGLWIAGEVSNLTRAASGHYYFS
LKDSRAQVRCAMFKGAAVRLAKPLKEGDHIEVSGKISIYEARGEFQITVN
EVRLKGLGQLYEAYERLKAQLQAEGAFAAERKKPLPVRPQCIGIVTSLAA
AALRDVVTTLKRRAPEIPVIVYPTPVQGAGSELQIAQAIKTASQRAECDV
LIVCRGGGSIEDLWAFNEEPVVRAIESCTVPVVSGVGHETDFTLADFVAD
MRAPTPTGAAELVSPNRQESLHRLAQAQCRLKTVLEQRYFDASQKLDWLA
RQIRHPRQKLDEQRASIGKLAQTLSYSMTQNVRTHTARFERQTQALKHCR
PDVSVCKKNIDRFQTALSHAFHQLLTHRRQSLTAQAALLEAVSPQHILER
GFSVVKNTRGQVIRNADVLKQGQKLHIIFADGETDVRVSKEQGQQDLFDC
I
>NMB0262 xseB, exodeoxyribonuclease, small subunit
MKKNAPKSFEEALSRLESLTQSMQGEMPLEDALAAYQEGNELVRYCQTKL
AQVEQKLQVLDTDGLKELNLESDE
>NMB0399 xthA, exodeoxyribonuclease III
MKITTWNVNSLNVRLPQVQNLLADNPPDILVLQELKLDQDKFPAAALQMM
GWHCVWSGQKTYNGVAIVSRSVPQDVHFGLPALPDDPQRRVIAATVSGVR
VINVYCVNGEALDSPKFKYKEQWFAALTEFVRDEMTRHGKLVLLGDFNIA
PADADCYDPEKWHEKIHCSSVERQWFQNLLDLGLTDSLRQVHPEGAFYTW
FDYRGAMFQRKLGLRIDHILVSPAMAAALKDVRVDLETRALERPSDHAPV
TAEFDW