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2024-05-17 04:30:50

Gene list

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COG category: Replication, recombination and repair
Organism: Neisseria meningitidis MC58, MC58

Number of genes found: 144

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Neisseria meningitidis MC58, MC58
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA NMB1749 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1829875 1086 + 0.464088
NA NMB1417 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1452191 795 - 0.539623
NA NMB1099 transposase, IS30 familySubName: Full=Transposase, IS30 family; chromosome CDS1115840 966 - 0.514493
NA NMB0455 conserved hypothetical proteinRecName: Full=Ribosomal RNA large subunit methyltransferase L; EC=2.1.1.173; AltName: Full=23S rRNA m2G2445 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase RlmL; chromosome CDS467131 1143 + 0.571304
NA NMB1322 putative primosomal replication protein nRecName: Full=Primosomal replication protein n; chromosome CDS1338832 303 - 0.429043
NA NMB1539 IS1106 transposaseSubName: Full=IS1106 transposase; chromosome CDS1591951 1008 + 0.52877
NA NMB0299 comEA-related proteinSubName: Full=ComEA-related protein; chromosome CDS313104 447 + 0.55481
NA NMB1411 IS1016C2 transposaseSubName: Full=IS1016C2 transposase; chromosome CDS1439995 654 - 0.470948
NA NMB1401 IS1016C2 transposaseSubName: Full=IS1016C2 transposase; chromosome CDS1432482 540 - 0.468519
NA NMB1337 conserved hypothetical proteinRecName: Full=Putative Holliday junction resolvase; EC=3.1.-.-; chromosome CDS1355615 456 + 0.561404
NA NMB2085 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS2206700 1050 - 0.391429
NA NMB0698 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS723555 690 + 0.518841
NA NMB0725 modification methylase HgaI-1RecName: Full=Cytosine-specific methyltransferase; EC=2.1.1.37; chromosome CDS755732 1059 + 0.336166
NA NMB1386 putative transposaseSubName: Full=Putative transposase; chromosome CDS1413341 456 + 0.429825
NA NMB0047 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS45079 285 + 0.392982
NA NMB1420 putative factor-for-inversion stimulation protein FisRecName: Full=Putative Fis-like DNA-binding protein; chromosome CDS1455191 240 - 0.495833
NA NMB1258 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1265774 1311 - 0.568268
NA NMB1076 DnaA-related proteinSubName: Full=DnaA-related protein; chromosome CDS1098337 669 - 0.547085
NA NMB0769 putative DNA polymerase III, delta prime subunitSubName: Full=Putative DNA polymerase III, delta prime subunit; chromosome CDS798279 978 + 0.511247
NA NMB0834 transposase, IS30 familySubName: Full=Transposase, IS30 family; chromosome CDS857829 966 - 0.512422
NA NMB1528 putative methylated-DNA--protein-cysteine methyltransferaseSubName: Full=Putative methylated-DNA--protein-cysteine methyltransferase; chromosome CDS1578582 810 - 0.54321
NA NMB1568 putative DNA polymerase holoenzyme chi subunitSubName: Full=Putative DNA polymerase holoenzyme chi subunit; chromosome CDS1627503 441 - 0.573696
NA NMB0057 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS66354 357 + 0.540616
NA NMB0361 conserved hypothetical proteinRecName: Full=UPF0213 protein NMB0361; chromosome CDS368832 276 + 0.532609
NA NMB0141 transposase, truncationSubName: Full=Transposase, truncation; chromosome CDS151248 366 + 0.530055
NA NMB2041 thiamin pyrophosphokinase-related proteinSubName: Full=Thiamin pyrophosphokinase-related protein; chromosome CDS2162135 876 + 0.58105
NA NMB0727 N-6 adenine-specific DNA methylaseSubName: Full=N-6 adenine-specific DNA methylase; EC=2.1.1.72; chromosome CDS758259 651 + 0.327189
NA NMB0494 DNA helicase, truncationSubName: Full=DNA helicase, truncation; chromosome CDS517630 486 - 0.545267
NA NMB0969 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS987827 174 - 0.367816
NA NMB0826 C-5 cytosine-specific DNA methylaseRecName: Full=Cytosine-specific methyltransferase; EC=2.1.1.37; chromosome CDS848892 1236 + 0.335761
NA NMB0495 replication proteinSubName: Full=Replication protein; chromosome CDS518212 984 - 0.416667
NA NMB0443 transposase, IS30 familySubName: Full=Transposase, IS30 family; chromosome CDS456464 966 + 0.512422
NA NMB0522 transposase, truncated chromosome CDS543995 126 + 0.428571
NA NMB1713 transposase, IS30 familySubName: Full=Transposase, IS30 family; chromosome CDS1789434 966 - 0.514493
NA NMB1399 IS1106 transposaseSubName: Full=IS1106 transposase; chromosome CDS1428210 975 - 0.529231
NA NMB0635 transposase, IS30 familySubName: Full=Transposase, IS30 family; chromosome CDS669318 966 - 0.512422
NA NMB1657 comE operon protein 1-related proteinSubName: Full=ComE operon protein 1-related protein; chromosome CDS1724748 618 - 0.542071
NA NMB0248 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS252182 240 + 0.375
NA NMB2007 ATP-dependent RNA helicase HrpA, truncationSubName: Full=ATP-dependent RNA helicase HrpA, truncation; chromosome CDS2119500 1392 + 0.568965
NA NMB2148 transposase, IS30 familySubName: Full=Transposase, IS30 family; chromosome CDS2258780 966 + 0.513458
NA NMB1290 C-5 cytosine-specific DNA-methylaseRecName: Full=Cytosine-specific methyltransferase; EC=2.1.1.37; chromosome CDS1305737 1014 - 0.329389
NA NMB1770 transposase, IS30 familySubName: Full=Transposase, IS30 family; chromosome CDS1854110 966 + 0.513458
NA NMB1510 thermonuclease family proteinSubName: Full=Thermonuclease family protein; chromosome CDS1560561 702 - 0.589744
NA NMB1634 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1697126 1209 - 0.405294
NA NMB1081 bacteriophage transposaseSubName: Full=Bacteriophage transposase; chromosome CDS1101164 1986 + 0.529204
NA NMB0911 transposase, IS30 familySubName: Full=Transposase, IS30 family; chromosome CDS925455 966 - 0.513458
NA NMB0805 transposase, IS30 familySubName: Full=Transposase, IS30 family; chromosome CDS831333 966 + 0.514493
NA NMB1259 transposase, IS30 familySubName: Full=Transposase, IS30 family; chromosome CDS1267622 966 + 0.513458
NA NMB2017 ComEA-related proteinSubName: Full=ComEA-related protein; chromosome CDS2131623 447 - 0.552573
NA NMB1050 transposase, IS30 familySubName: Full=Transposase, IS30 family; chromosome CDS1067585 966 - 0.510352
NA NMB0583 IS1016C2 transposaseSubName: Full=IS1016C2 transposase; chromosome CDS612020 669 - 0.469357
NA NMB2011 ATP-dependent RNA helicase HrpA, truncationSubName: Full=ATP-dependent RNA helicase HrpA, truncation; chromosome CDS2124759 3420 + 0.56345
NA NMB2089 conserved hypothetical proteinRecName: Full=UPF0102 protein NMB2089; chromosome CDS2210854 348 + 0.520115
NA NMB1895 DNA adenine methylase, truncationSubName: Full=DNA adenine methylase, truncation; chromosome CDS1994885 144 - 0.368056
NA NMB0225 transposase, IS30 familySubName: Full=Transposase, IS30 family; chromosome CDS233555 966 - 0.511387
NA NMB1422 putative ATP-dependent RNA helicaseSubName: Full=Putative ATP-dependent RNA helicase; chromosome CDS1456836 1374 + 0.590975
NA NMB0507 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS535245 489 + 0.308793
NA NMB0077 site-specific DNA methylase, truncationSubName: Full=Site-specific DNA methylase, truncation; chromosome CDS87536 351 + 0.367521
NA NMB1022 transposase, IS30 familySubName: Full=Transposase, IS30 family; chromosome CDS1037517 966 - 0.512422
NA NMB1687 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1764310 771 - 0.555123
NA NMB1368 putative ATP-dependent RNA helicaseSubName: Full=Putative ATP-dependent RNA helicase; chromosome CDS1392179 1389 + 0.546436
NA NMB1601 IS1106 transposaseSubName: Full=IS1106 transposase; chromosome CDS1661113 1008 + 0.525794
NA NMB1873 putative DNA polymerase, bacteriophage-typeSubName: Full=Putative DNA polymerase, bacteriophage-type; chromosome CDS1977435 738 + 0.626016
NA NMB0771 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS799615 780 + 0.525641
NA NMB0991 IS1106 transposaseSubName: Full=IS1106 transposase; chromosome CDS1004343 1113 - 0.525606
NA NMB1064 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1082094 537 + 0.519553
NA NMB1033 modification methylase NlaIVRecName: Full=Cytosine-specific methyltransferase; EC=2.1.1.37; chromosome CDS1047617 1272 - 0.399371
NA NMB1553 transposase, truncationSubName: Full=Transposase, truncation; chromosome CDS1611743 318 - 0.528302
NA NMB0122 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS130904 570 + 0.536842
NA NMB0919 putative IS1106 transposaseSubName: Full=Putative IS1106 transposase; chromosome CDS930008 960 - 0.536458
NA NMB1683 MutT/nudix family proteinRecName: Full=RNA pyrophosphohydrolase; EC=3.6.1.-; AltName: Full=(Di)nucleoside polyphosphate hydrolase; chromosome CDS1759943 525 - 0.561905
NA NMB1543 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1600909 1215 + 0.377778
NA NMB1251 transposase, IS30 familySubName: Full=Transposase, IS30 family; chromosome CDS1257804 966 - 0.513458
NA NMB1102 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1117784 594 + 0.574074
NA NMB1602 putative transposaseSubName: Full=Putative transposase; chromosome CDS1662032 1119 - 0.531725
NA NMB0400 transposase, truncated chromosome CDS404238 573 + 0.521815
NA NMB1464 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1513088 492 - 0.471545
dinG NMB0287 probable ATP-dependent helicase DinGSubName: Full=Probable ATP-dependent helicase DinG; chromosome CDS295525 2151 - 0.58345
dinP NMB1448 DNA-damage-inducible protein PRecName: Full=DNA polymerase IV; Short=Pol IV; EC=2.7.7.7; chromosome CDS1492816 957 - 0.567398
dnaA NMB1903 chromosomal replication initiator protein DnaARecName: Full=Chromosomal replication initiator protein DnaA; chromosome CDS2004389 1557 - 0.55106
dnaB NMB0885 replicative DNA helicaseSubName: Full=Replicative DNA helicase; EC=3.6.1.-; chromosome CDS905693 1407 + 0.556503
dnaE NMB1827 DNA polymerase III, alpha subunitRecName: Full=DNA polymerase III subunit alpha; EC=2.7.7.7; chromosome CDS1919893 3435 + 0.569141
dnaG NMB1537 DNA primaseRecName: Full=DNA primase; EC=2.7.7.-; chromosome CDS1587917 1773 + 0.520023
dnaN NMB1902 DNA polymerase III, beta subunitRecName: Full=DNA polymerase III subunit beta; EC=2.7.7.7; chromosome CDS2003051 1104 - 0.556159
dnaQ-1 NMB1451 DNA polymerase III, epsilon subunitSubName: Full=DNA polymerase III, epsilon subunit; EC=2.7.7.7; chromosome CDS1498269 1413 - 0.488323
dnaQ-2 NMB1514 DNA polymerase III, epsilon subunitSubName: Full=DNA polymerase III, epsilon subunit; EC=2.7.7.7; chromosome CDS1563249 735 - 0.583673
dnaX NMB1443 DNA polymerase III, subunits gamma and tauSubName: Full=DNA polymerase III, subunits gamma and tau; EC=2.7.7.7; chromosome CDS1484248 2115 + 0.578723
dprA NMB0116 DNA processing chain ASubName: Full=DNA processing chain A; chromosome CDS124922 1194 + 0.580402
exoA NMB2082 exodeoxyribonucleaseSubName: Full=Exodeoxyribonuclease; EC=3.1.11.2; chromosome CDS2203729 780 - 0.530769
gcr NMB1278 site-specific recombinaseSubName: Full=Site-specific recombinase; chromosome CDS1290119 2007 + 0.572496
gyrA NMB1384 DNA gyrase subunit ARecName: Full=DNA gyrase subunit A; EC=5.99.1.3; chromosome CDS1409972 2751 + 0.549618
gyrB NMB0212 DNA gyrase subunit BRecName: Full=DNA gyrase subunit B; EC=5.99.1.3; chromosome CDS214197 2391 - 0.560017
himA NMB0729 integration host factor, alpha subunitRecName: Full=Integration host factor subunit alpha; Short=IHF-alpha; chromosome CDS761371 303 + 0.481848
himD NMB1302 integration host factor, beta subunitRecName: Full=Integration host factor subunit beta; Short=IHF-beta; chromosome CDS1320247 315 + 0.498413
holA NMB0708 DNA polymerase III, delta subunitSubName: Full=DNA polymerase III, delta subunit; EC=2.7.7.7; chromosome CDS739767 999 + 0.590591
hupB NMB1230 DNA-binding protein HU-betaRecName: Full=DNA-binding protein HU-beta; chromosome CDS1234976 270 - 0.540741
ligA-1 NMB0666 DNA ligaseRecName: Full=DNA ligase; EC=6.5.1.2; AltName: Full=Polydeoxyribonucleotide synthase [NAD(+)]; chromosome CDS692639 2526 - 0.584719
ligA-2 NMB2048 DNA ligaseSubName: Full=DNA ligase; EC=6.5.1.1; chromosome CDS2169808 825 - 0.570909
mfd NMB1281 transcription-repair coupling factorRecName: Full=Transcription-repair-coupling factor; Short=TRCF; EC=3.6.4.-; chromosome CDS1295171 4140 + 0.568116
mutL NMB1442 mismatch repair protein MutLRecName: Full=DNA mismatch repair protein MutL; chromosome CDS1482177 1977 + 0.580678
mutM NMB1295 formamidopyrimidine-DNA glycosylaseRecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; EC=3.2.2.23; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase MutM; Short=AP lyase MutM; EC=4.2.99.18; chromosome CDS1311093 828 - 0.559179
mutS NMB2160 DNA mismatch repair protein MutSRecName: Full=DNA mismatch repair protein MutS; chromosome CDS2269649 2595 + 0.557611
mutT NMB0453 mutT proteinSubName: Full=MutT protein; chromosome CDS465858 810 + 0.598765
mutY NMB1396 A/G-specific adenine glycosylaseSubName: Full=A/G-specific adenine glycosylase; EC=3.2.2.-; chromosome CDS1425619 1050 + 0.555238
nth NMB0533 endonuclease IIIRecName: Full=Endonuclease III; EC=4.2.99.18; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase; chromosome CDS554322 630 - 0.536508
ntpA NMB0642 dATP pyrophosphohydrolaseSubName: Full=dATP pyrophosphohydrolase; chromosome CDS674747 459 - 0.570806
parC NMB1605 topoisomerase IV subunit ARecName: Full=DNA topoisomerase 4 subunit A; EC=5.99.1.3; AltName: Full=Topoisomerase IV subunit A; chromosome CDS1665175 2304 + 0.567708
parE NMB1682 topoisomerase IV subunit BRecName: Full=DNA topoisomerase 4 subunit B; EC=5.99.1.3; AltName: Full=Topoisomerase IV subunit B; chromosome CDS1757891 1986 - 0.576032
pivNM-1A NMB1552 pilin gene inverting protein PivNM-1ASubName: Full=Pilin gene inverting protein PivNM-1A; SubName: Full=Pilin gene inverting protein PivNM-1B; chromosome CDS1608057 957 + 0.388715
pivNM-1B NMB1625 pilin gene inverting protein PivNM-1BSubName: Full=Pilin gene inverting protein PivNM-1A; SubName: Full=Pilin gene inverting protein PivNM-1B; chromosome CDS1690733 957 - 0.388715
pivNM-2 NMB1750 pilin gene inverting protein PivNM-2SubName: Full=Pilin gene inverting protein PivNM-2; chromosome CDS1831586 951 + 0.37224
polA NMB1982 DNA polymerase ISubName: Full=DNA polymerase I; EC=2.7.7.7; chromosome CDS2078537 2817 + 0.57224
priA NMB0551 primosomal protein n`SubName: Full=Primosomal protein n; chromosome CDS577012 2190 + 0.599543
radC NMB1038 DNA repair protein RadCRecName: Full=UPF0758 protein NMB1038; chromosome CDS1053258 678 + 0.566372
rdgC NMB0851 recombination associated protein RdgCRecName: Full=Recombination-associated protein RdgC; chromosome CDS876285 900 - 0.515556
recA NMB1445 recA proteinRecName: Full=Protein RecA; AltName: Full=Recombinase A; chromosome CDS1488548 1047 - 0.56256
recB NMB0785 exodeoxyribonuclease V 135 KD polypeptideSubName: Full=Exodeoxyribonuclease V 135 KD polypeptide; EC=3.1.11.5; chromosome CDS810794 3615 - 0.576764
recC NMB1720 exodeoxyribonuclease V 125 kD polypeptideSubName: Full=Exodeoxyribonuclease V 125 kD polypeptide; EC=3.1.11.5; chromosome CDS1799914 3210 - 0.556386
recD NMB1233 exodeoxyribonuclease V, alpha subunitSubName: Full=Exodeoxyribonuclease V, alpha subunit; EC=3.1.11.5; chromosome CDS1239271 1746 - 0.574456
recG NMB1788 ATP-dependent DNA helicase RecGSubName: Full=ATP-dependent DNA helicase RecG; EC=3.6.1.-; chromosome CDS1876300 2043 - 0.586393
recJ NMB0842 single-stranded-DNA-specific exonuclease RecJSubName: Full=Single-stranded-DNA-specific exonuclease RecJ; EC=3.1.-.-; chromosome CDS867852 1701 + 0.567313
recN NMB0740 DNA repair protein RecNRecName: Full=DNA repair protein RecN; AltName: Full=Recombination protein N; chromosome CDS771293 1674 + 0.526284
recO NMB0447 DNA repair protein RecORecName: Full=DNA repair protein RecO; AltName: Full=Recombination protein O; chromosome CDS461795 792 + 0.617424
recQ NMB0274 ATP-dependent DNA helicase RecQSubName: Full=ATP-dependent DNA helicase RecQ; EC=3.6.1.-; chromosome CDS275435 2301 - 0.574533
recR NMB1237 recombination protein RecRRecName: Full=Recombination protein RecR; chromosome CDS1243558 621 - 0.542673
rep NMB1447 ATP-dependent DNA helicaseSubName: Full=ATP-dependent DNA helicase; EC=3.6.1.-; chromosome CDS1490632 2016 + 0.528274
rnhA NMB1618 ribonuclease HIRecName: Full=Ribonuclease HI; Short=RNase HI; EC=3.1.26.4; chromosome CDS1681632 438 + 0.559361
rnhB NMB0192 ribonuclease HIIRecName: Full=Ribonuclease HII; Short=RNase HII; EC=3.1.26.4; chromosome CDS190697 585 - 0.57265
ruvA NMB0265 Holliday junction DNA helicase RuvARecName: Full=Holliday junction ATP-dependent DNA helicase RuvA; EC=3.6.4.12; chromosome CDS269389 585 - 0.569231
ruvB NMB1243 Holliday junction DNA helicase RuvBRecName: Full=Holliday junction ATP-dependent DNA helicase RuvB; EC=3.6.4.12; chromosome CDS1249930 1032 + 0.59593
ruvC NMB1419 crossover junction endodeoxyribonuclease RuvCRecName: Full=Crossover junction endodeoxyribonuclease RuvC; EC=3.1.22.4; AltName: Full=Holliday junction nuclease RuvC; AltName: Full=Holliday junction resolvase RuvC; chromosome CDS1454652 537 - 0.603352
ssb NMB1460 single-strand binding proteinRecName: Full=Single-stranded DNA-binding protein; Short=SSB; chromosome CDS1509486 525 - 0.588571
tag NMB1673 DNA-3-methyladenine glycosylase ISubName: Full=DNA-3-methyladenine glycosylase I; EC=3.2.2.20; chromosome CDS1747431 552 + 0.516304
topA NMB0118 DNA topoisomerase IRecName: Full=DNA topoisomerase 1; EC=5.99.1.2; AltName: Full=DNA topoisomerase I; chromosome CDS126674 2307 + 0.535327
ung NMB1222 uracil-DNA glycosylaseRecName: Full=Uracil-DNA glycosylase; Short=UDG; EC=3.2.2.27; chromosome CDS1225822 660 + 0.540909
uvrA NMB0962 excinuclease ABC, subunit ARecName: Full=UvrABC system protein A; Short=UvrA protein; AltName: Full=Excinuclease ABC subunit A; chromosome CDS978339 2850 - 0.566316
uvrB NMB1331 excinuclease ABC, subunit BRecName: Full=UvrABC system protein B; Short=Protein UvrB; AltName: Full=Excinuclease ABC subunit B; chromosome CDS1348427 2028 - 0.548817
uvrC NMB1326 excinuclease ABC, subunit CRecName: Full=UvrABC system protein C; Short=Protein UvrC; AltName: Full=Excinuclease ABC subunit C; chromosome CDS1343007 1854 + 0.536138
uvrD NMB0232 DNA helicase IISubName: Full=DNA helicase II; EC=3.6.1.-; chromosome CDS239387 2208 + 0.569746
xerC NMB1868 integrase/recombinase XerCRecName: Full=Tyrosine recombinase XerC; chromosome CDS1973045 906 - 0.611479
xerD NMB0751 integrase/recombinase XerDRecName: Full=Tyrosine recombinase XerD; chromosome CDS781453 876 + 0.553653
xseA NMB1363 exodeoxyribonuclease, large subunitRecName: Full=Exodeoxyribonuclease 7 large subunit; EC=3.1.11.6; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit; chromosome CDS1387305 1356 - 0.562684
xseB NMB0262 exodeoxyribonuclease, small subunitRecName: Full=Exodeoxyribonuclease 7 small subunit; EC=3.1.11.6; AltName: Full=Exodeoxyribonuclease VII small subunit; Short=Exonuclease VII small subunit; chromosome CDS265971 225 - 0.511111
xthA NMB0399 exodeoxyribonuclease IIISubName: Full=Exodeoxyribonuclease III; EC=3.1.11.2; chromosome CDS402525 771 + 0.568093