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2024-05-19 10:26:37

Gene list

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COG category: Replication, recombination and repair
Organism: Salmonella enterica subsp. enterica serovar Typhi str. CT18, CT18

Number of genes found: 253

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Salmonella enterica subsp. enterica serovar Typhi str. CT18, CT18
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
HCM1.103 putative DNA helicaseSubName: Full=Putative DNA helicase; pHCM1 CDS78416 2040 + 0.504902
HCM1.134c putative recombinaseSubName: Full=Putative recombinase; SubName: Full=Uncharacterized protein; pHCM1 CDS104515 1182 - 0.50423
HCM1.162c putative transposaseSubName: Full=Putative transposase; pHCM1 CDS119023 765 - 0.610458
HCM1.187c putative DNA modification methylaseRecName: Full=Cytosine-specific methyltransferase; EC=2.1.1.37; pHCM1 CDS137517 1428 - 0.489496
HCM1.188 putative nucleaseSubName: Full=Putative nuclease; pHCM1 CDS139168 516 + 0.484496
HCM1.194 transposaseSubName: Full=Putative transposase; SubName: Full=Transposase; pHCM1 CDS143085 1209 + 0.450786
HCM1.201 putative transposaseSubName: Full=Putative transposase; pHCM1 CDS151052 1398 + 0.528612
HCM1.209c putative transposaseSubName: Full=Putative transposase; pHCM1 CDS156075 1005 - 0.481592
HCM1.213c putative transposaseSubName: Full=Putative transposase; pHCM1 CDS160707 705 - 0.530496
HCM1.219 putative transposaseSubName: Full=Putative transposase; pHCM1 CDS163369 705 + 0.531915
HCM1.236 putative transposaseSubName: Full=Putative transposase; pHCM1 CDS175403 1005 + 0.490547
HCM1.249c transposaseSubName: Full=Putative transposase; SubName: Full=Transposase; pHCM1 CDS183230 1209 - 0.450786
HCM1.57c hypothetical proteinSubName: Full=Uncharacterized protein; pHCM1 CDS34194 1755 - 0.501994
HCM1.59 putative DNA modification methylaseSubName: Full=Putative DNA modification methylase; pHCM1 CDS37651 825 + 0.476364
HCM2.0008c putative recombinaseSubName: Full=Putative recombinase; pHCM2 CDS2785 1077 - 0.552461
HCM2.0010c putative exonucleaseSubName: Full=Putative exonuclease; pHCM2 CDS4130 945 - 0.529101
HCM2.0012 hypothetical proteinSubName: Full=Uncharacterized protein; pHCM2 CDS6283 432 - 0.525463
HCM2.0015c putative DNA polymerase III alpha subunitSubName: Full=Putative DNA polymerase III alpha subunit; pHCM2 CDS8084 3519 - 0.547883
HCM2.0020c hypothetical proteinSubName: Full=Uncharacterized protein; pHCM2 CDS16239 891 - 0.50954
HCM2.0040c hypothetical proteinSubName: Full=Uncharacterized protein; pHCM2 CDS28542 1212 - 0.519802
HCM2.0041c putative DNA helicaseSubName: Full=Putative DNA helicase; pHCM2 CDS29816 1341 - 0.548844
HCM2.0047 hypothetical proteinSubName: Full=Uncharacterized protein; pHCM2 CDS35508 552 + 0.463768
HCM2.0062c hypothetical proteinSubName: Full=Uncharacterized protein; pHCM2 CDS53759 474 - 0.552743
HCM2.0078 putative helicaseSubName: Full=Putative helicase; pHCM2 CDS65984 1560 + 0.514744
HCM2.0109c putative ribonuclease HRecName: Full=Ribonuclease H; Short=RNase H; EC=3.1.26.4; pHCM2 CDS85641 609 - 0.54023
HCM2.0114c hypothetical proteinSubName: Full=Uncharacterized protein; pHCM2 CDS89018 558 - 0.544803
HCM2.0125c hypothetical proteinSubName: Full=Uncharacterized protein; pHCM2 CDS98804 1917 - 0.53782
HCM2.0127c hypothetical proteinSubName: Full=Uncharacterized protein; pHCM2 CDS100950 1086 - 0.544199
STY0111 probable ATP-dependent helicase HepARecName: Full=RNA polymerase-associated protein RapA; EC=3.6.4.-; AltName: Full=ATP-dependent helicase HepA; chromosome CDS109800 2907 - 0.570347
STY0112 DNA polymerase IIRecName: Full=DNA polymerase; EC=2.7.7.7; chromosome CDS112880 2352 - 0.565901
STY0114 putative IS element transposaseSubName: Full=Putative IS element transposase; chromosome CDS115571 441 - 0.460317
STY0115 putative IS element transposaseSubName: Full=Putative IS element transposase; chromosome CDS116031 1209 + 0.489661
STY0157 7,8-dihydro-8-oxoguanine-triphosphataseSubName: Full=7,8-dihydro-8-oxoguanine-triphosphatase; chromosome CDS162968 396 + 0.520202
STY0214 ATP-dependent helicase HrpBSubName: Full=ATP-dependent helicase HrpB; chromosome CDS222750 2442 + 0.595823
STY0253 ribonuclease HIIRecName: Full=Ribonuclease HII; Short=RNase HII; EC=3.1.26.4; chromosome CDS265810 597 + 0.561139
STY0254 DNA polymerase III, alpha chainSubName: Full=DNA polymerase III, alpha chain; chromosome CDS266430 3483 + 0.558714
STY0284 ribonuclease HRecName: Full=Ribonuclease HI; Short=RNase HI; EC=3.1.26.4; chromosome CDS300696 468 - 0.502137
STY0285 DNA polymerase III epsilon subunitRecName: Full=DNA polymerase III subunit epsilon; EC=2.7.7.7; chromosome CDS301227 732 + 0.516393
STY0358 hypothetical protein DinP (DNA damage-inducible protein)RecName: Full=DNA polymerase IV; Short=Pol IV; EC=2.7.7.7; chromosome CDS367097 1056 + 0.514205
STY0429 exonuclease SbcCSubName: Full=Exonuclease SbcC; chromosome CDS437771 3105 - 0.585185
STY0430 exonuclease SbcDSubName: Full=Exonuclease SbcD; chromosome CDS440872 1203 - 0.558603
STY0463 exodeoxyribonuclease small subunitRecName: Full=Exodeoxyribonuclease 7 small subunit; EC=3.1.11.6; AltName: Full=Exodeoxyribonuclease VII small subunit; Short=Exonuclease VII small subunit; chromosome CDS469625 243 - 0.54321
STY0478 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS483689 285 + 0.410526
STY0493 DNA-binding protein HU-betaRecName: Full=DNA-binding protein HU-beta; AltName: Full=HU-1; AltName: Full=NS1; chromosome CDS500253 273 + 0.494505
STY0528 DNA polymerase III subunits gamma and tauSubName: Full=DNA polymerase III subunits gamma and tau; chromosome CDS533757 1929 + 0.589425
STY0530 recombination protein RecRRecName: Full=Recombination protein RecR; chromosome CDS536060 606 + 0.613861
STY0697 DNA polymerase III, delta subunitSubName: Full=DNA polymerase III, delta subunit; chromosome CDS692238 1032 - 0.575581
STY0735 seqA proteinRecName: Full=Negative modulator of initiation of replication; chromosome CDS735177 543 + 0.510129
STY0749 deoxyribodipyrimidine photolyaseSubName: Full=Deoxyribodipyrimidine photolyase; chromosome CDS750319 1422 + 0.567511
STY0756 probable DNA recombinaseSubName: Full=Probable DNA recombinase; chromosome CDS757169 567 + 0.506173
STY0771 endonuclease VIII, DNA N-glycosylase with an AP lyase activityRecName: Full=Endonuclease 8; AltName: Full=DNA glycosylase/AP lyase Nei; EC=3.2.2.-; EC=4.2.99.18; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase Nei; AltName: Full=Endonuclease VIII; chromosome CDS768705 792 + 0.52399
STY0831 excision nuclease ABC subunit BRecName: Full=UvrABC system protein B; Short=Protein UvrB; AltName: Full=Excinuclease ABC subunit B; chromosome CDS829029 2022 + 0.553907
STY0855 putative ATP-dependent RNA helicase rhlERecName: Full=ATP-dependent RNA helicase RhlE; EC=3.6.4.13; chromosome CDS849385 1368 + 0.584795
STY0935 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS927559 1659 + 0.556962
STY0946 probable integrase remnantSubName: Full=Probable integrase remnant; Flags: Fragment; chromosome CDS937244 378 - 0.460317
STY0960 conserevd hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS952706 1344 + 0.568452
STY0982 integration host factor beta-subunit (IHF-beta)RecName: Full=Integration host factor subunit beta; Short=IHF-beta; chromosome CDS978131 285 + 0.501754
STY1014 putative DNA methylaseSubName: Full=Putative DNA methylase; chromosome CDS1010618 882 - 0.530612
STY1023 putative DNA replication proteinSubName: Full=Putative DNA replication protein; chromosome CDS1017163 750 + 0.529333
STY1045 putative bacteriophage proteinSubName: Full=Putative bacteriophage protein; chromosome CDS1028101 261 + 0.421456
STY1075 putative DNA invertase (fragment)SubName: Full=Putative DNA invertase; Flags: Fragment; chromosome CDS1051126 141 + 0.652482
STY1097 helicase IV (75 kD helicase)SubName: Full=Helicase IV; SubName: Full=Helicase IV (75 kD helicase); chromosome CDS1075470 2055 + 0.549392
STY1240 DNA polymerase III, delta' subunitSubName: Full=DNA polymerase III, delta subunit; chromosome CDS1193926 1005 + 0.58607
STY1241 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1194941 798 + 0.530075
STY1256 transcription-repair coupling factor (TrcF)RecName: Full=Transcription-repair-coupling factor; Short=TRCF; EC=3.6.4.-; chromosome CDS1208383 3447 - 0.56832
STY1275 putative mutT family proteinSubName: Full=Putative MutT-family protein; SubName: Full=Putative mutT family protein; chromosome CDS1232234 462 - 0.521645
STY1336 DNA topoisomerase I, omega protein IRecName: Full=DNA topoisomerase 1; EC=5.99.1.2; AltName: Full=DNA topoisomerase I; AltName: Full=Omega-protein; AltName: Full=Relaxing enzyme; AltName: Full=Swivelase; AltName: Full=Untwisting enzyme; chromosome CDS1293319 2598 + 0.54157
STY1358 integrase (fragment)SubName: Full=Integrase; Flags: Fragment; chromosome CDS1319577 345 + 0.44058
STY1366 DNA-invertase (fragment)SubName: Full=DNA-invertase; Flags: Fragment; chromosome CDS1322944 282 + 0.553191
STY1379 transposase for insertion sequence element IS200SubName: Full=Transposase; SubName: Full=Transposase for insertion sequence element IS200; SubName: Full=Transposase for insertion sequence element is200; chromosome CDS1333722 459 - 0.457516
STY1405 O6-methylguanine-DNA-alkyltransferaseRecName: Full=Methylated-DNA--protein-cysteine methyltransferase; EC=2.1.1.63; AltName: Full=6-O-methylguanine-DNA methyltransferase; Short=MGMT; AltName: Full=O-6-methylguanine-DNA-alkyltransferase; chromosome CDS1356335 516 - 0.552326
STY1428 ATP-dependent helicase HrpASubName: Full=ATP-dependent helicase HrpA; chromosome CDS1378457 3903 + 0.536767
STY1499 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1456097 705 - 0.4
STY1604 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1544282 1770 - 0.585311
STY1643 DNA-invertaseSubName: Full=DNA-invertase; chromosome CDS1572347 573 + 0.450262
STY1669 endonuclease IIIRecName: Full=Endonuclease III; EC=4.2.99.18; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase; chromosome CDS1597769 636 + 0.522013
STY1688 ribonuclease TRecName: Full=Ribonuclease T; EC=3.1.13.-; AltName: Full=Exoribonuclease T; Short=RNase T; chromosome CDS1614382 648 + 0.529321
STY1771 integration host factor alpha-subunitRecName: Full=Integration host factor subunit alpha; Short=IHF-alpha; chromosome CDS1693319 300 - 0.483333
STY1804 conserved hypothetical proteinRecName: Full=Excinuclease cho; EC=3.1.25.-; AltName: Full=Endonuclease cho; AltName: Full=UvrC homolog protein; chromosome CDS1723228 909 + 0.546755
STY1812 exodeoxyribonuclease IIIRecName: Full=Exodeoxyribonuclease III; Short=EXO III; Short=Exonuclease III; EC=3.1.11.2; AltName: Full=AP endonuclease VI; chromosome CDS1731505 807 + 0.521685
STY1813 putative MutT-family proteinSubName: Full=Putative MutT-family protein; chromosome CDS1732384 417 + 0.570743
STY1816 DNA topoisomerase IIIRecName: Full=DNA topoisomerase 3; EC=5.99.1.2; AltName: Full=DNA topoisomerase III; chromosome CDS1734647 1950 - 0.56
STY1951 putative ATP-dependent helicaseSubName: Full=Putative ATP-dependent helicase; chromosome CDS1840118 1911 - 0.561486
STY1955 conserved hypothetical proteinRecName: Full=Uncharacterized Nudix hydrolase NudL; EC=3.6.1.-; chromosome CDS1844138 579 + 0.588946
STY2056 putative transposaseSubName: Full=Putative transposase; SubName: Full=Transposase; chromosome CDS1917993 1209 - 0.450786
STY2062 putative DNA replication proteinSubName: Full=Putative DNA replication protein; chromosome CDS1922526 747 - 0.534137
STY2077 putative integraseSubName: Full=Putative integrase; chromosome CDS1932482 1077 + 0.42247
STY2084 exodeoxyribonuclease XSubName: Full=Exodeoxyribonuclease X; EC=3.1.11.-; chromosome CDS1936709 699 + 0.519313
STY2102 Holliday junction DNA helicaseRecName: Full=Holliday junction ATP-dependent DNA helicase RuvB; EC=3.6.4.12; chromosome CDS1954694 1011 - 0.569733
STY2106 crossover junction endodeoxyribonucleaseRecName: Full=Crossover junction endodeoxyribonuclease RuvC; EC=3.1.22.4; AltName: Full=Holliday junction nuclease RuvC; AltName: Full=Holliday junction resolvase RuvC; chromosome CDS1958187 522 - 0.55364
STY2108 DATP pyrophosphohydrolaseSubName: Full=DATP pyrophosphohydrolase; EC=3.6.1.-; chromosome CDS1959515 453 - 0.529801
STY2154 excinuclease ABC subunit CRecName: Full=UvrABC system protein C; Short=Protein UvrC; AltName: Full=Excinuclease ABC subunit C; chromosome CDS2000644 1833 - 0.534643
STY2199 patch repair proteinSubName: Full=Patch repair protein; EC=3.1.-.-; chromosome CDS2037487 471 - 0.56051
STY2200 DNA-cytosine methyltransferaseRecName: Full=Cytosine-specific methyltransferase; EC=2.1.1.37; chromosome CDS2037938 1431 - 0.540881
STY2205 UmuC proteinSubName: Full=UmuC protein; chromosome CDS2043481 1269 - 0.544523
STY2266 putative DNA gyrase inhibitory proteinRecName: Full=DNA gyrase inhibitor; chromosome CDS2092179 468 - 0.508547
STY2276 exodeoxyribonuclease IRecName: Full=Exodeoxyribonuclease I; EC=3.1.11.1; chromosome CDS2101051 1431 + 0.539483
STY2319 putative O-antigen biosynthesis proteinRecName: Full=GDP-mannose mannosyl hydrolase; Short=GDPMH; EC=3.6.1.-; chromosome CDS2149116 480 - 0.602083
STY2337 DNA-3-methyladenine glycosidase IISubName: Full=DNA-3-methyladenine glycosidase II; EC=3.2.2.21; chromosome CDS2169451 870 - 0.612644
STY2420 insertion element IS1 protein InsASubName: Full=IS1 transposase; SubName: Full=Insertion element IS1 protein; SubName: Full=Insertion element IS1 protein InsA; SubName: Full=Putative IS1 transposase; chromosome CDS2249889 276 - 0.536232
STY2438 endonuclease IVRecName: Full=Probable endonuclease 4; EC=3.1.21.2; AltName: Full=Endodeoxyribonuclease IV; AltName: Full=Endonuclease IV; chromosome CDS2269017 858 + 0.536131
STY2460 putative helicaseSubName: Full=Putative helicase; chromosome CDS2290935 1761 + 0.569563
STY2490 AlkB proteinSubName: Full=AlkB protein; chromosome CDS2319432 651 - 0.591398
STY2491 ADA regulatory proteinSubName: Full=ADA regulatory protein; EC=2.1.1.63; chromosome CDS2320085 1062 - 0.608286
STY2499 DNA gyrase subunit ARecName: Full=DNA gyrase subunit A; EC=5.99.1.3; chromosome CDS2331373 2637 - 0.555556
STY2525 conserved hypothetical proteinRecName: Full=Nucleoside triphosphatase NudI; EC=3.6.1.-; chromosome CDS2360194 426 + 0.495305
STY2576 conserved hypothetical proteinRecName: Full=Uncharacterized Nudix hydrolase YfcD; EC=3.6.-.-; chromosome CDS2413430 555 - 0.544144
STY2663 DNA ligaseRecName: Full=DNA ligase; EC=6.5.1.2; AltName: Full=Polydeoxyribonucleotide synthase [NAD(+)]; chromosome CDS2499609 2016 - 0.571925
STY2714 conserved hypothetical proteinRecName: Full=GDP-mannose pyrophosphatase NudK; EC=3.6.1.-; chromosome CDS2547296 576 - 0.487847
STY2737 conserved hypothetical proteinRecName: Full=DnaA regulatory inactivator Hda; chromosome CDS2573576 726 - 0.53719
STY2753 exodeoxyribonuclease large subunitRecName: Full=Exodeoxyribonuclease 7 large subunit; EC=3.1.11.6; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit; chromosome CDS2590945 1350 + 0.582963
STY2825 DNA repair protein RecORecName: Full=DNA repair protein RecO; AltName: Full=Recombination protein O; chromosome CDS2687272 729 - 0.554184
STY2836 ATP-dependent RNA helicase SrmBRecName: Full=ATP-dependent RNA helicase SrmB; EC=3.6.4.13; chromosome CDS2698505 1335 + 0.548315
STY2840 uracil-DNA glycosylaseRecName: Full=Uracil-DNA glycosylase; Short=UDG; EC=3.2.2.27; chromosome CDS2702208 690 + 0.553623
STY2870 DNA repair proteinRecName: Full=DNA repair protein RecN; AltName: Full=Recombination protein N; chromosome CDS2739173 1662 + 0.54633
STY2879 putative reverse transcriptaseSubName: Full=Putative reverse transcriptase; chromosome CDS2759733 774 - 0.405685
STY2889 putative DNA-invertaseSubName: Full=Putative DNA-invertase; chromosome CDS2768199 573 - 0.509599
STY2950 RecA proteinRecName: Full=Protein RecA; AltName: Full=Recombinase A; chromosome CDS2827753 1062 - 0.544256
STY3033 DNA mismatch repair proteinRecName: Full=DNA mismatch repair protein MutS; chromosome CDS2900744 2568 + 0.569704
STY3065 conserved hypothetical proteinRecName: Full=CRISPR-associated endonuclease Cas1; EC=3.1.-.-; chromosome CDS2926948 918 - 0.529412
STY3111 5'-3' exonucleaseRecName: Full=Flap endonuclease Xni; Short=FEN; EC=3.1.-.-; chromosome CDS2979135 816 + 0.556373
STY3137 prepilin peptidase dependent protein B precursorSubName: Full=Prepilin peptidase dependent protein B; chromosome CDS3012345 564 - 0.535461
STY3145 conserved hypothetical proteinRecName: Full=RNA pyrophosphohydrolase; EC=3.6.1.-; AltName: Full=(Di)nucleoside polyphosphate hydrolase; chromosome CDS3018413 531 - 0.506591
STY3148 DNA mismatch repair proteinRecName: Full=DNA mismatch repair protein MutH; AltName: Full=Methyl-directed mismatch repair protein; chromosome CDS3019626 696 + 0.579023
STY3193 possible integraseSubName: Full=Possible integrase; chromosome CDS3058163 1647 - 0.500911
STY3198 single-stranded DNA-specific exonucleaseSubName: Full=Single-stranded DNA-specific exonuclease; chromosome CDS3064471 1734 - 0.572664
STY3200 site-specific integrase/recombinaseRecName: Full=Tyrosine recombinase XerD; chromosome CDS3066947 897 - 0.530658
STY3246 endonuclease ISubName: Full=Endonuclease I; chromosome CDS3111090 708 + 0.560734
STY3250 conserved hypothetical proteinRecName: Full=Putative Holliday junction resolvase; EC=3.1.-.-; chromosome CDS3114351 417 + 0.551559
STY3265 A/G-specific adenine glycosylaseSubName: Full=A/G-specific adenine glycosylase; chromosome CDS3125080 1053 + 0.548908
STY3351 topoisomerase IV subunit ARecName: Full=DNA topoisomerase 4 subunit A; EC=5.99.1.3; AltName: Full=Topoisomerase IV subunit A; chromosome CDS3194450 2259 - 0.55954
STY3359 topoisomerase IV subunit BRecName: Full=DNA topoisomerase 4 subunit B; EC=5.99.1.3; AltName: Full=Topoisomerase IV subunit B; chromosome CDS3201464 1893 - 0.555732
STY3363 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS3205236 633 - 0.530806
STY3389 DNA primaseRecName: Full=DNA primase; EC=2.7.7.-; chromosome CDS3232006 1746 + 0.517182
STY3454 conserved hypothetical proteinRecName: Full=UPF0213 protein YhbQ; chromosome CDS3295898 318 + 0.553459
STY3461 ATP-dependent RNA helicase (dead-box protein)RecName: Full=ATP-dependent RNA helicase DeaD; EC=3.6.4.13; AltName: Full=Cold-shock DEAD box protein A; chromosome CDS3301996 1941 - 0.573931
STY3565 Fis DNA-binding proteinRecName: Full=DNA-binding protein Fis; chromosome CDS3409864 297 + 0.464646
STY3566 putative adenine-specific DNA-modification methylaseSubName: Full=Putative adenine-specific DNA-modification methylase; chromosome CDS3410246 885 + 0.456497
STY3608 DNA helicase IISubName: Full=DNA helicase II; chromosome CDS3461790 2163 - 0.577439
STY3610 integrase/recombinaseRecName: Full=Tyrosine recombinase XerC; chromosome CDS3464804 903 - 0.566999
STY3642 ATP-dependent DNA helicaseSubName: Full=ATP-dependent DNA helicase; chromosome CDS3499842 2025 - 0.528395
STY3658 probable bacteriophage integraseSubName: Full=Probable bacteriophage integrase; chromosome CDS3515470 1053 - 0.48433
STY3667 DNA adenine methylaseSubName: Full=DNA adenine methylase; EC=2.1.1.72; chromosome CDS3519664 858 + 0.463869
STY3695 DNA-invertaseSubName: Full=DNA-invertase; chromosome CDS3541120 567 + 0.511464
STY3715 histone like DNA-binding protein HU-alpha (NS2) (HU-2)RecName: Full=DNA-binding protein HU-alpha; AltName: Full=HU-2; AltName: Full=NS2; chromosome CDS3565553 273 - 0.47619
STY3719 conserved hypothetical proteinRecName: Full=NADH pyrophosphatase; EC=3.6.1.22; chromosome CDS3568430 774 - 0.555556
STY3775 primosomal protein replication factorSubName: Full=Primosomal protein replication factor; chromosome CDS3639854 2199 + 0.593452
STY3881 DNA polymerase ISubName: Full=DNA polymerase I; chromosome CDS3736421 2787 - 0.53929
STY3940 chromosomal replication initiator proteinRecName: Full=Chromosomal replication initiator protein DnaA; chromosome CDS3805127 1401 + 0.529622
STY3941 DNA polymerase III beta-subunitRecName: Full=DNA polymerase III subunit beta; EC=2.7.7.7; chromosome CDS3806532 1101 + 0.563124
STY3942 recF proteinRecName: Full=DNA replication and repair protein RecF; chromosome CDS3807830 1074 + 0.546555
STY3943 DNA gyrase subunit BRecName: Full=DNA gyrase subunit B; EC=5.99.1.3; chromosome CDS3808932 2415 + 0.556522
STY4048 ATP-dependent DNA helicaseSubName: Full=ATP-dependent DNA helicase; EC=3.6.1.-; chromosome CDS3909336 2082 - 0.582133
STY4068 formamidopyrimidine-DNA glycosylaseRecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; EC=3.2.2.23; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase MutM; Short=AP lyase MutM; EC=4.2.99.18; chromosome CDS3926357 810 + 0.546914
STY4107 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS3968090 363 - 0.506887
STY4124 insertion element IS1 protein InsASubName: Full=IS1 transposase; SubName: Full=Insertion element IS1 protein; SubName: Full=Insertion element IS1 protein InsA; SubName: Full=Putative IS1 transposase; chromosome CDS3988152 276 + 0.536232
STY4160 3-methyladenine DNA glycosylase I, constitutiveSubName: Full=3-methyladenine DNA glycosylase I; SubName: Full=3-methyladenine DNA glycosylase I, constitutive; chromosome CDS4019343 582 - 0.517182
STY4237 putative membrane proteinSubName: Full=Putative membrane protein; chromosome CDS4104402 372 + 0.532258
STY4239 conserved hypothetical proteinRecName: Full=Ribosomal RNA small subunit methyltransferase D; EC=2.1.1.171; chromosome CDS4105054 597 - 0.564489
STY4392 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS4252698 1125 + 0.536
STY4522 DNA helicaseSubName: Full=DNA helicase; chromosome CDS4410683 1365 + 0.530403
STY4586 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS4463285 921 + 0.438654
STY4636 DNA adenine methylaseSubName: Full=DNA adenine methylase; EC=2.1.1.72; chromosome CDS4502229 861 - 0.465738
STY4637 putative exonucleaseSubName: Full=Putative exonuclease; chromosome CDS4503086 585 - 0.439316
STY4645 phage integraseSubName: Full=Phage integrase; chromosome CDS4506245 1026 + 0.495127
STY4664 putative DNA helicaseSubName: Full=Putative DNA helicase; EC=3.6.1.-; chromosome CDS4525533 1512 + 0.508598
STY4666 probable phage integraseSubName: Full=Probable phage integrase; chromosome CDS4528781 1014 + 0.455621
STY4676 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS4538390 783 + 0.586207
STY4797 putative membrane proteinSubName: Full=Putative membrane protein; chromosome CDS4658590 447 - 0.447427
STY4821 integraseSubName: Full=Integrase; chromosome CDS4683853 1266 + 0.496051
STY4822 protein kinaseSubName: Full=Protein kinase; chromosome CDS4685181 1077 - 0.363045
STY4823 protein kinaseSubName: Full=Protein kinase; chromosome CDS4686254 1074 - 0.349162
STY4915 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS4774545 774 + 0.591731
dam DNA adenine methylaseRecName: Full=DNA adenine methylase; EC=2.1.1.72; AltName: Full=DNA adenine methyltransferase; AltName: Full=Deoxyadenosyl-methyltransferase; AltName: Full=M.StyDam; chromosome CDS4191069 837 + 0.492234
dnaB replicative DNA helicaseRecName: Full=Replicative DNA helicase; EC=3.6.4.12; chromosome CDS4311715 1416 + 0.550141
dnaC probable DNA replication proteinSubName: Full=Probable DNA replication protein; chromosome CDS4759357 738 - 0.51084
holC DNA polymerase III, chi subunitSubName: Full=DNA polymerase III, chi subunit; chromosome CDS4675956 483 - 0.536232
holD DNA polymerase III, psi subunitRecName: Full=DNA polymerase III subunit psi; chromosome CDS4768834 438 + 0.59589
insA putative IS1 transposaseSubName: Full=Putative IS1 transposase; pHCM1 CDS106430 276 + 0.528986
insA putative IS1 transposaseRecName: Full=Insertion element IS1 protein InsA; pHCM1 CDS2265 276 - 0.528986
insA putative IS1 transposaseSubName: Full=IS1 transposase; SubName: Full=Insertion element IS1 protein; SubName: Full=Insertion element IS1 protein InsA; SubName: Full=Putative IS1 transposase; pHCM1 CDS177180 276 - 0.536232
insA putative IS1 transposaseSubName: Full=IS1 transposase; SubName: Full=Insertion element IS1 protein; SubName: Full=Insertion element IS1 protein InsA; SubName: Full=Putative IS1 transposase; pHCM1 CDS108842 276 + 0.532609
insA putative IS1 transposaseSubName: Full=IS1 transposase; SubName: Full=Insertion element IS1 protein; SubName: Full=Insertion element IS1 protein InsA; SubName: Full=Putative IS1 transposase; pHCM1 CDS153973 276 - 0.536232
insA insertion element IS1 proteinSubName: Full=IS1 transposase; SubName: Full=Insertion element IS1 protein; SubName: Full=Insertion element IS1 protein InsA; SubName: Full=Putative IS1 transposase; chromosome CDS4518711 276 - 0.536232
insB insertion element IS1 protein InsBSubName: Full=Insertion element IS1 protein InsB; SubName: Full=Putative IS1 transposase; chromosome CDS2249467 504 - 0.551587
insB putative IS1 transposaseSubName: Full=Insertion element IS1 protein InsB; SubName: Full=Putative IS1 transposase; pHCM1 CDS153551 504 - 0.551587
insB putative IS1 transposaseSubName: Full=Putative IS1 transposase; pHCM1 CDS109036 504 + 0.545635
insB putative IS1 transposaseSubName: Full=Insertion element IS1 protein InsB; SubName: Full=Putative IS1 transposase; pHCM1 CDS176758 504 - 0.551587
insB putative IS1 transposaseSubName: Full=Putative IS1 transposase; pHCM1 CDS106624 504 + 0.547619
insB insertion element IS1 protein InsBSubName: Full=Insertion element IS1 protein InsB; SubName: Full=Putative IS1 transposase; chromosome CDS4518289 504 - 0.551587
insB putative IS1 transposaseSubName: Full=Putative IS1 transposase; pHCM1 CDS1876 471 - 0.545648
insB insertion element IS1 protein InsBSubName: Full=Insertion element IS1 protein InsB; SubName: Full=Putative IS1 transposase; chromosome CDS3988346 504 + 0.551587
int bacteriophage integraseSubName: Full=Bacteriophage integrase; chromosome CDS4541654 1260 - 0.566667
int putative integraseRecName: Full=Integrase/recombinase; AltName: Full=E2 protein; pHCM1 CDS121046 1014 + 0.61144
int integraseSubName: Full=Integrase; chromosome CDS1008747 1341 - 0.488441
int integrase (fragment)SubName: Full=Integrase; Flags: Fragment; chromosome CDS4539799 279 - 0.577061
mod type III restriction-modification system StyLTI enzyme modSubName: Full=Type III restriction-modification system StyLTI enzyme mod; EC=2.1.1.72; chromosome CDS394911 1959 + 0.466565
mucB putative DNA-repair modulatorSubName: Full=Putative DNA-repair modulator; pHCM1 CDS186216 1260 + 0.525397
mug G/U mismatch-specific DNA glycosylaseRecName: Full=G/U mismatch-specific DNA glycosylase; EC=3.2.2.28; AltName: Full=Double-strand-specific uracil glycosylase; AltName: Full=Mismatch-specific uracil DNA-glycosylase; Short=MUG; chromosome CDS3235872 507 - 0.538462
mutL DNA mismatch repair proteinRecName: Full=DNA mismatch repair protein MutL; chromosome CDS4578042 1857 + 0.58266
nfi putative endonucleaseRecName: Full=Endonuclease V; EC=3.1.21.7; AltName: Full=Deoxyinosine 3endonuclease; AltName: Full=Deoxyribonuclease V; Short=DNase V; chromosome CDS3566644 672 - 0.58631
priB primosomal replication protein NRecName: Full=Primosomal replication protein n; chromosome CDS4606459 315 + 0.530159
radC putative DNA repair proteinRecName: Full=UPF0758 protein YicR; chromosome CDS3924952 666 + 0.527027
rci shufflon-specific DNA recombinaseSubName: Full=Rci; SubName: Full=Shufflon-specific DNA recombinase; chromosome CDS4435339 1152 + 0.49566
rdgC recombination associated protein RdgCRecName: Full=Recombination-associated protein RdgC; chromosome CDS434430 846 - 0.546099
recB exonuclease V subunitSubName: Full=Exonuclease V subunit; chromosome CDS3001645 3546 - 0.556402
recC exonuclease V subunitSubName: Full=Exonuclease V subunit; chromosome CDS3008249 3372 - 0.537367
recD exonuclease V alpha-subunitSubName: Full=Exonuclease V alpha-subunit; chromosome CDS2999813 1836 - 0.585512
recQ ATP-dependent DNA helicaseSubName: Full=ATP-dependent DNA helicase; EC=3.6.1.-; chromosome CDS3455088 1830 - 0.551366
relB RelB proteinSubName: Full=RelB protein; chromosome CDS4647525 243 + 0.502058
rep putative replication initiation proteinRecName: Full=Replication initiation protein; Short=Protein E; Short=Protein rep; pHCM1 CDS107709 756 + 0.480159
rhlB putative ATP-dependent RNA helicaseRecName: Full=ATP-dependent RNA helicase RhlB; EC=3.6.4.13; chromosome CDS3496937 1266 + 0.546604
ruvA Holliday junction DNA helicaseRecName: Full=Holliday junction ATP-dependent DNA helicase RuvA; EC=3.6.4.12; chromosome CDS1955713 612 - 0.553922
samB UV protection proteinSubName: Full=UV protection protein; chromosome CDS4472479 1275 - 0.50902
ssB single strand binding proteinRecName: Full=Single-stranded DNA-binding protein 2; Short=SSB 2; chromosome CDS4422151 537 + 0.540037
ssb single-strand DNA-binding proteinRecName: Full=Single-stranded DNA-binding protein 1; Short=SSB 1; chromosome CDS4321410 531 + 0.59322
tatD putative deoxyribonucleaseRecName: Full=Tat-linked quality control protein TatD; AltName: Full=Deoxyribonuclease TatD; chromosome CDS3436587 783 - 0.541507
tnpA transposaseSubName: Full=Transposase; pHCM1 CDS122925 2973 + 0.60444
tnpA transposase for insertion sequence element is200RecName: Full=Transposase for insertion sequence element IS200; chromosome CDS3122530 459 + 0.459695
tnpA transposase for insertion sequence element IS200RecName: Full=Transposase for insertion sequence element IS200; chromosome CDS1791357 459 - 0.459695
tnpA transposase for insertion sequence element IS200SubName: Full=Transposase for insertion sequence element IS200; chromosome CDS3092099 459 - 0.459695
tnpA transposase for insertion sequence element IS200RecName: Full=Transposase for insertion sequence element IS200; chromosome CDS2330729 459 - 0.459695
tnpA transposase for insertion sequence element is200SubName: Full=Transposase; SubName: Full=Transposase for insertion sequence element IS200; SubName: Full=Transposase for insertion sequence element is200; chromosome CDS1085337 459 + 0.457516
tnpA transposase for insertion sequence element IS200SubName: Full=Transposase; SubName: Full=Transposase for insertion sequence element IS200; SubName: Full=Transposase for insertion sequence element is200; chromosome CDS657246 459 + 0.457516
tnpA transposase for insertion sequence element IS200RecName: Full=Transposase for insertion sequence element IS200; chromosome CDS3026477 459 - 0.457516
tnpA transposase for insertion sequence element IS200SubName: Full=Transposase; SubName: Full=Transposase for insertion sequence element IS200; SubName: Full=Transposase for insertion sequence element is200; chromosome CDS1235316 459 + 0.457516
tnpA transposase for insertion sequence element IS200RecName: Full=Transposase for insertion sequence element IS200; chromosome CDS1759921 459 - 0.457516
tnpA transposase for insertion sequence element IS200SubName: Full=Transposase for insertion sequence element IS200; chromosome CDS2539538 459 - 0.453159
tnpA transposase for insertion sequence element is200RecName: Full=Transposase for insertion sequence element IS200; chromosome CDS4622105 459 - 0.459695
tnpA transposase for insertion sequence element IS200SubName: Full=Putative IS200 transposase; SubName: Full=Transposase for insertion sequence element IS200; chromosome CDS507385 459 + 0.45098
tnpA transposase for insertion sequence element IS200RecName: Full=Transposase for insertion sequence element IS200; chromosome CDS1178594 459 + 0.459695
tnpA transposase for insertion sequence element IS200RecName: Full=Transposase for insertion sequence element IS200; chromosome CDS1367421 459 + 0.459695
tnpA transposase for insertion sequence element IS200RecName: Full=Transposase for insertion sequence element IS200; chromosome CDS3099690 459 - 0.459695
tnpA transposase for insertion sequence element IS200RecName: Full=Transposase for insertion sequence element IS200; chromosome CDS1529647 459 - 0.459695
tnpA transposaseSubName: Full=Transposase; chromosome CDS3550557 414 + 0.461353
tnpA transposase for insertion sequence element IS200SubName: Full=Transposase; SubName: Full=Transposase for insertion sequence element IS200; SubName: Full=Transposase for insertion sequence element is200; chromosome CDS271076 459 + 0.455338
tnpA transposase for insertion sequence element IS200SubName: Full=Transposase; SubName: Full=Transposase for insertion sequence element IS200; SubName: Full=Transposase for insertion sequence element is200; chromosome CDS1082125 459 + 0.457516
tnpA transposase for insertion sequence element IS200RecName: Full=Transposase for insertion sequence element IS200; chromosome CDS3013615 459 - 0.459695
tnpA transposase for insertion sequence element IS200RecName: Full=Transposase for insertion sequence element IS200; chromosome CDS2475976 459 - 0.459695
tnpA transposase for insertion sequence element is200SubName: Full=Transposase; SubName: Full=Transposase for insertion sequence element IS200; SubName: Full=Transposase for insertion sequence element is200; chromosome CDS864041 459 + 0.457516
tnpA transposase for insertion sequence element is200RecName: Full=Transposase for insertion sequence element IS200; chromosome CDS446265 459 + 0.459695
tnpA transposase for insertion sequence element IS200RecName: Full=Transposase for insertion sequence element IS200; chromosome CDS1715544 459 - 0.459695
tnpA transposase for insertion sequence element IS200SubName: Full=Transposase; SubName: Full=Transposase for insertion sequence element IS200; SubName: Full=Transposase for insertion sequence element is200; chromosome CDS280088 459 - 0.457516
tnpR resolvaseSubName: Full=Resolvase; pHCM1 CDS122365 558 + 0.611111
topB topoisomerase BRecName: Full=DNA topoisomerase; EC=5.99.1.2; chromosome CDS4418728 1995 + 0.528822
trhI putative DNA helicaseSubName: Full=Putative DNA helicase; SubName: Full=TrhI; pHCM1 CDS82216 1857 + 0.436187
uvrA excision nuclease subunit ARecName: Full=UvrABC system protein A; Short=UvrA protein; AltName: Full=Excinuclease ABC subunit A; chromosome CDS4318337 2826 - 0.573248
yafM conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS4782631 486 + 0.485597
ybaV putative exported proteinSubName: Full=Putative exported protein; chromosome CDS502837 375 + 0.522667
ybaZ putative methylated-DNA methyltransferaseSubName: Full=Putative methylated-DNA methyltransferase; chromosome CDS516818 390 - 0.558974
yraN conserved hypothetical proteinRecName: Full=UPF0102 protein YraN; chromosome CDS3292494 396 + 0.558081
yrdD conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS4254294 543 + 0.528545
yrfE putative NUDIX hydrolaseSubName: Full=Putative NUDIX hydrolase; chromosome CDS4180698 597 + 0.522613