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# Neisseria meningitidis Z2491, Z2491

>gid:331451  NMA0011  hypothetical protein NMA0011
MANGKNGTLYIGVTMNLPERVWQHKNHVNIDGFTARYDVHDLVWYQFFEN
MPEAVAKEKTMKKWRREWKIKLIEEQNPEWLDLSGVLFV
>gid:331487  NMA0022  putative IS1016 transposase
MRKSRLSRYKQNKLIELFVAGVTARTATEPDSIVYTDCYRSYDVLDVSEF
SHFRINHSTHFAERQNHINGIENFWNRAKRHLRKFNGIPKAHFELYLKEC
EWRFNNSEIKVQISILKQLVKSSLS
>gid:331514  NMA0033  putative transposase for IS1655
MSYTQLTQGERYHIQYLSRHCTVTEIAKQLNRHKSTISREIRRHRTQGQQ
YSAEKAQRQSRTIKQRKRQPYKLDSQLIQHIDTLIRRKLSPEQVCAYLCK
HHQITLHHSTIYRHLRQDKSNGSTLWQHLRICSKPYRKRYGSTWTRGKVP
NRVGIENRPAIVDQKSRIGDWEADTIVGKGQKSALLTLVERVTRYTIICK
LDSLKAEDTARAAVRTLKAHKDRVHTITMDNGKEFYQHTKITKALKAETY
FCRPYHSWEKGLNENTNGLIRQYFPKQTDFRNISDREIRRVQDELNHRPR
KTLGYETPSVLFLNLFQPLIH
>gid:332056  NMA0151  possible DNA methylase
MAAGKHTKHSNRVRIIGGQCRGRKLSFTSADGLRPTPDSVREKLFNWLGQ
DLTGKTVLDLFGGSGALGIEAASRNAKRVLISDNNRQTAQTLQKNSRELG
LGQVQIVCSDGIAYLKTVSEQFDVVFLDPPFAWQDWQILFDALKPCLNPR
SFVYLEAGTLPDIPDWLTEYREGKSGQSTFELRVFQVAE
>gid:332142  NMA0175  putative transposase for IS1016
FRINHSTHFAERQNHINGIENFWNQAKRHLRKFNGIPKAHFELYLKECEW
RFNNSEIKVLVPF
>gid:332143  NMA0176  putative transposase for IS1016
MRKSRLSQYKQNKLIELFVAGVTARTAAELVGVNKNTAAYYFHRLRLLIY
QNSPHLEMFDGEVEADESYFGGQRKGKRGGGAAGKVAVFGLLKRNGKVYT
VTVPNTQTATLFPIIREQVKPDSIVYTDCYRSYDVLDVSEFSHFSFAETS
F
>gid:332268  NMA0211  putative DNA transport competence protein
MLCPEKMSGMAGQYPYGVRSGLRRNGLKLWDIHFRMTRFIVARCGLLFAT
LKGKTMKKMFVLFCMLFSCAFSLAAVNINAASQQELEALPGIGPAKAKAI
AEYRAQNGAFKSVDDLTKVKGIGPAVLAKLKDQASVGAPAPKGPAKPVLP
ADKK
>gid:332338  NMA0221  putative transposase for IS1106
MSTFFQQTAQAMIAKHIDRFPLLKLDQVIDWQPIEQYLNRQKNRYLRDHR
GRPAYPLLSMFKAVLLGQWHSLSDPELEHSLITRIDFNLFCRFDELSIPD
YSTLCRYRNWLAQDDTLSELLKLINRQLTEKGLKIEKASAAVVDATIIQT
AGSKQRQTIEVDEEGQVSGQTTPSKDSDARWIKKNGLYKLGYKQHTRTDA
EGYIEKLHITPANAHECKHLSPLLEGLPEGTTVYADKGYDSAENRQHLEE
RQLLDGIMRKTCRNRPLSEAQTKRNRYLSKTRYVVEQSFGTLHRKFRYAR
AAYFGLIKVSAQSHLKAMCLNLLKAANRLSAPVCA
>gid:332676  NMA0292  hypothetical protein NMA0292
MQPAVYILASQRNGTLYIGVTSDLVQRIYQHREHLIEGFTLRYNVTMLVW
YELHPTMESAITREKQLKKWNRAWKLQLIEENNVSWQDLWFDII
>gid:332849  NMA0341  hypothetical protein NMA0341
MRLNHKQGEAGEDAALAFLQSQGCTLLARNWHCAYGEIDLIVKNGGMILF
VEVKYRKNRQFGGAAYSISPSKLLKLQRSVEYYLQQNRLTNVPCRLDAVL
IEGSRPPEWIQNITG
>gid:332862  NMA0344  probable IS1016 transposase, partial CDS
MRKSRLSRYKQNKLIELFVAGVTARTAAELVGINKNTAAYYFHRLRLLIY
QNSPHLEMFDGEVEADESYFGGQRKGKRGRGAAGKVAVFGLLKRNGKVYT
VTVPNTQTATLFPIIREQVKPDSIVYTDCYRSYDVLDVSEFSHFSFAETS
F
>gid:332863  NMA0344A  probable IS1016 transposase, partial CDS
FRINHSTHFAERQNHINGIENFWNQAKRHLRKFNGIPKAHFELYLKECEW
RFNNSEIKVLVPF
>gid:332870  NMA0346  putative ATP-binding protein
MSSNQYIQSLELTNFTVLPNDTFEFSENLNVIVAENGCGKTHLLKILYSL
LEVTSNTKNRLLKTELQKSFADKLLNVFRPDSLGRLSKRLQGRGRTEIVL
KLQNGTTHSSLNFSSNSSSQVNVQSIGLKENEYTPTPIFLPSRELITLCP
WFTSLYQNQSIPFEETWFDTCMQLNHPLAKGPRETKIRELLEPIENAMGG
KVSEEQGRFYLSLTNTGGKIEAPLVAEGLRKFVMIARLIATGALLDKGYL
FWDEPEANLNPKLIKVAARIIWSLSQQGIQVFIATHSLFLLRELELLKLE
NNTDLPVRFFSLIASDDGTKVEQGNSINDLNTLILLDENIMQADRYLNI
>gid:332876  NMA0348  putative nuclease
MLKIISANVNGIRSAYKKGFYEYIAASGADIVCVQELKAQEADLSADMKN
PHGMHGHWHCAEKRGYSGVAVYSKRKPDNVQIGMGIEEFDREGRFVRCDF
GRLSVISLYLPSGSSAEERQQVKYRFLDAFYPMLEAMKNEGRDIVVCGDW
NIAHQNIDLKNWKGNQKNSGFLPEEREWIGKVIHKLGWTDMWRTLYPDVP
GYTWWSNRGQAYAKDVGWRIDYQMVTPELAAKAVSAHVYKDEKFSDHAPL
VVEYDYAAE
>gid:333017  NMA0388  possible secreted DNA ligase
MIKKTIGGIIPIFTAVFIPASAGAADLMLAQEYKGQDIAGWAMSEKLDGV
RAYWDGKHLISRQGYAFTPPKGFTAQFPPYPLDGELYSGRGQFEQISATV
RSVSSDWRGIRLHVFDVPKAQGNLYQRLAVATQWLKTHPNAPITIIPQIK
VRDRQHAMDFLKQIEAQGGEGVMLRQPESRYSGGRSSQLLKLKSQYDDEC
TVTRHYEGKGRNAGRLGAVGCKNRHGEFRIGSGFKDKDRDNPPKIGTLIT
YRYRGFTRKGTPKFATFVRVRTDR
>gid:333051  NMA0394  hypothetical protein NMA0394
MPTVRFTESVSKHDLDALFEWAKASYGAESCWKTLYLNGLPLGNLSPEWA
ERVKKDWEAGCSESSDGIFLNADGWPDMGRRLQHLARIWKEAGLLHGWRD
ECFDLTDGGSNPLFALERAAFRPFGLLSRAVHLNGLVESDGRWHFWIGRR
SPHKAVDPDKLDNTAAGGVSSGELPSETVCRESSEEAGLDKTLLPLIRPV
SQLHSLRPVSRGVHNEILYVFDAVLPETFLPENQDGEVAGFEKMDIGGLL
AAMLSGNMMHDAQLVTLDAFCRYGLIDAAHPLSEWLDGIRL
>gid:333220  NMA0423  putative DNA transport competence protein
MLCPEKMSGMAGQYPYGVRSGLRRNGLKLWDIHFRMTRFIVARCGLLFAT
LKGKTMKKMFVLFCMLFSCAFSLAAVNINAASQQELEALPGIGPAKAKAI
AEYRAQNGAFKSVDDLTKVKGIGPAVLAKLKDQASVGAPAPKGPAKPVLP
ADKK
>gid:333230  NMA0427  modification methylase (cytosine-specific DNA methylase)
MKNSKLKAVDFFCGGGGMSYGMQSAGIQVLAGIDYEPSCKETYEANINAK
FIQADVFELQPETLEKELGLKKNDDDLILIGCSPCQYWSVIQTDKRKSEK
SKSLLLEFQRFVEYFNPGYVVVENVPGILSRMKESRLDNFIKLLEEKGFT
VHFGIHNTADYGIPQSRKRFTLIANRITKEKLEPVKYSGKRLTVRDVLGM
ENGFPKIIAGHQDETDFMHSCAGLSDINLKRLALIPKNGGNRLAFAHIPE
LQLECFIGKDNSFKDTFGRLWWDKPAPTITTKFFSISNGRFAHPEEDRAL
SLREGATLQSFPRNYVFKAGSRDKIARLIGNAVPPMYAEKIGRAIVDNIE
C
>gid:333234  NMA0428  conserved hypothetical protein
MSEEKLKMSFEPTVIEHLGVKMYSHTVPAIAELIANAYDACATEVEVRLF
DKPEHKIVIKDNGIGMSFDEINDFYLRIGRNRREEKQASPCGRIPTGKKG
LGKLALFGLGNKIEISTIQGNERVTFTLDYAEIRRSKGIYQPEFRKESVE
SNIESGTTITLTELTKKQGYPLDNYVEHLSRLFDFPAQDFKIKVSLNGSE
PKIIDGNLKYDLVTPQFEWEYQDLATNISSLSSKFEQYEYSGLIQGKFIT
TEKPLKNNMKGITLFANGRMVNMPEFFTDSESSHFYSYLTGWLNVDFIDN
DDEDLIATDRTSLDWKHSKTSKLRVFLGEIVRAIGQDWRKRRKKEKDDEV
KGESGVDIEDWKNKLPEKEREPVEVILNRLEDSELTNKEQAEVISALHSI
IPEYPYYHWRHLHQDLHTACNDFYNEKKDYLSAAIEAVKVFEDKVQKQTG
LHSIDGRELIEQAFGSKNSILLLTNNKTKAEQNLEDGLEQLACGTWTGFR
NPVQHELRANLSPSIFNDKDALDLISLVSYLLRKVEQTKKRSKVVSSK
>gid:333237  NMA0430  putative DNA helicase
MQNMKNQVRGSGMDARSNPANVSDGLQNSSGHIGTNTRYRLTKLGEQMAR
LPIDPKIARILLAAKKHDCMAEILVIASALSIQDPRERPLEARDAAAKAH
ERFTDKQSDFLAYLNIWDSFQRERDKGLSNKQLVQWCRQYFLSHLRMREW
RELHHQLAQTAIEMGLTTKEAAFRRLSEIKQLTSSENQGDQDLSAKRKQK
QLDKKQHRAQIRAAKEAGYEQIHRALLTGLIANVGMKSPDGNDYTGARGS
RFHLFPASALFKAKPKWVMAAELVETTKLYARDVAVIQPEWIEQEAPHLV
RYHYFEPHWEQKRGEVVASERVTLYGLTVLPRRPVPYGKVAPEEAREIFI
RSALVAQECDLKADFFVHNKKLIKEITELEHKSRKQDVLVDDEALFAFYH
ERLPDFYTADAVSDGLRPANPQQTAPSYAREERREGKTVAAQTNFSATAA
NPLPNPLPQEREQSAAASAVSNDLHPANPQQTAPSPVGEGRGEGKTVASQ
TNFSATTANPLPNPLPQEGEQSAAASAVSNDPKPKKQPAPPKGRLKPLPL
ADIRTFQAWLKTAKRDNPRLLFLSRDDLMQHAAAHITEEQFPKFWQTADG
KFKLSYRFEPHHPLDGVTMTVPLTVLNRLHAPSLEWLVPGMLREKIQLLI
KALPKQIRRICVPVPDFITKFLESNPDRQAVIIPQLAHFIAKSAGDMRIF
EQIDQDAWAAQELPEHCYLNLLIIDDGGQELAGGRKLHELQQQLGQAAAV
TFRDNTQEFERDNVTTWDIGTLPESIKFARGKQQLTGYLGLQKEKDGRIA
LRLCDTTEAAEQAHRQGVIELMKLQLKEQVKDLNKGIQGFTQAAMLLKHI
NADTLRDDLTQAVCDRAFIGEDELPRNEKAFKEQIKRARSRLPAVKEALS
RYLQETAAAYAELNGKLGKHPLTHLLRLRLQTLLAAGFATRTPWAQWPRL
PIYLKAMTLRLEKYSSNPARDAAREADIQELEQMWQEKNDGLVKQGLPVS
DDLTAFKWMIEELRVSLFAQELKTPYPVSVKRLLKEWEDLN
>gid:333374  NMA0458  transposase for insertion element IS1106A3
MSTFFQQTAQAMIAKHIDRFPLLKLDQVIDWQPIEQYLNRQKNRYLRDHR
GRPAYPLLSMFKAVLLGQWHSLSDPELEHSLITRIDFNLFCRFDELSIPD
YSTLCRYRNWLAQDDTLSELLKLINRQLTEKGLKIEKASAAVVDATIIQT
AGSEQRQAIEVDEEGQVSGQTTLSKDKNARWTKKNSLYKLGYKQHTRTDA
EGYIEKLYITPTNAHECTHLSPLLEGLPKGTTVYADKGYDSKENRQHLKE
HRLQNGIMRKACRNRPLTETQTKRNRYLSKTRYSGLNLNQDKATKPQTVQ
IVRQGEATPYWFKFNPLYVVEQSFGTLHRKFRYARAAYFGLSKVSAQSHL
KAMCLNLLKAANRLSAPAAA
>gid:333383  NMA0461  remnant of transposase from insertion element IS1106A2
MSTFFRQTAQAMIAKHIDRFPLLKLDRVIDWQPIEQYLNRQKNRYLRDHR
GRPAYPLLSMFKAVLLGQWHSLSDPELEHSSITRIDFNLFCRFDELSIPD
YSIVD
>gid:333418  NMA0471  insertion element IS1016 transposase
MKITHCKLKKKVQKELLRFFVLEVTARSAADILGIHPNSAALFYRKIRTV
INHHLALAADEVFEDPVEPDESDFGGRRKGRRGRGAAGKVVVFGILKRNG
RVYTVVVDNAKSETLLPVIKKKIMPDSIVYTDSLSSCDKLDVSGFIHYRI
NHSKEFADRQNHINGIENFWNQAKRVLRKYNGIDCKSFPLFLKECEFRFN
FGTPSQQLKILRDWCGI
>gid:333617  NMA0511  insertion element IS1655 transposase
MSYTQLTQGERYHIQYLFRHCTVTEIAKQLNRHKSTISREIRRHRTQGQQ
YSAEKAQRQSRTIKQRKRQPYKLDSQLIQHIDTLIRRKLSPEQVCAYLRK
HHQITLHHSTIYRYLRQDKSNGSTLWQHLRICSKPYRKRYGSTWTRGKVP
NRVGIENRPAIVDQKSRIGDWEADTIVGKGQKSALLTLVERVTRYTIICK
LDSLKAEDTARAAVRALKAHKDRVHTITMDNGKEFYQHTKITKALKAETY
FCRP
>gid:333747  NMA0532  hypothetical protein NMA0532
MKYRRFYRNGGTYFFTVVTNKRQKILTDDAVRLALRQAVMAVRERYPFEI
LAWVLMPDHLHTIWRLPDNDSAYSERWRQIKRHSQYLIGGNLRLWQKRFW
EHTIRDEADFACHFDYLHFNPVKHGYVGQISDWRFSTFHRYVKQGIYPHN
WGGGNADFSIGYD
>gid:333829  NMA0554  putative transposase for IS1016
MKITHCKLKKKVQKELIRFFVLEVTARSAADILGIHPNSAVLFYRKIRTV
INHHLALAADEVFEGPVEPDESDFGGRRKGRRGRGAAGKVVVFGILKRNG
RVYTVVVNNAKSETLLPVIKKKIMPDSIVYTDSLSSGDKLDVSGFIHYRI
NHSKEFVDRQNHINGIENFWNQAKRVLRKYSGLTKIRTRRRSRRQYK
>gid:333923  NMA0583  hypothetical protein NMA0583
MLSARYLHLHEALGLGPMWLKQAAAVLPPKNTPAPSAQARPQTVRAAPIR
PSQPHNGQARLETMKALETAAVHTRKPAPETETPPPGLSDGIAPVPAASG
ITKLAVVSLCPPIEDAVYGQLFYGKAGVLLDNILKAVGLDAAYVHKTCWV
KTAAVGNPMPSEAAIETATVSVMQELDGCRAPAVLFLGQAFVNPERQAMI
ETLCGSRPFFIIDHPARLLRQPELKARAWQVLKQLKRALRQGGGS
>gid:334198  NMA0630  hypothetical protein NMA0630
MTWRSLLIQNGGKLSLQRRQLLIQQNGESHTVPLEDIAVIIIENRETLIT
APLLSALAEHGATLLTCDEQFLPCGQWLPYAQYHRQLKILKLQLNISEPL
KKQLWQHIVRQKILNQAFVADETGNDLAAKRLRTLASEVRSGDTGNREAQ
AAALYFQALFGEKFTRNDNNAVNAALNYTYAVLRAAVARALTLYGWLPAL
GLFHRSELNPFNLADDFIEPLRPLADLTVIHLYEQGRLKTELTLGIKQHL
IKILYYQTSIERQHFSTLAAIDKMISSFQAGVTDKNAKQLKLPEILPLKE
YQYE
>gid:334355  NMA0664  putative transposase for IS1016
MRKSRLSRYKQNKLIELFVAGVTARTAAELVGVNKNTAAYYFHRLRLLIY
QNSPHLEMFDGEVEADESYFGGQRKGKRGGGAAGKVAVFGLLKRNGKVYT
VTVPNTQTATLFPIIREQVKPDSIVYTDCYRSYDVLDVREFSHFSFAETS
F
>gid:334356  NMA0664a  putative transposase for IS1016
FRINHSTHFAERQNHINGIENFWNQAKRHLRKFNGIPKAHFELYLKECEW
RFNNSEIKVLVPF
>gid:334468  NMA0693  hypothetical protein NMA0693
MKKDIFYCEQWSYGYKRLHKPFSEKQAEEKHLKGELYTAVIGSATQPEYV
ITLREEVGFFSVNFFDKFGRDYLTHQFQKYSNSNYYFLSMAVWRDYITLE
SHDLAEGYTYFFNENTDDCYVLKQDFINNERYEKTELYSQKDKVILFPKF
GEYDLVLNPDII
>gid:334613  NMA0733  putative transposase
MFGFRLSGGKGILQRSQVALVVMESTGGLEIPAAKAIRRAGIAVIIANPR
QTHQFAQLQPLTKTDAKDAKMPAFFAQMTAQKEDSQTMPYQPPTEAEEVL
EALVNRRNQSADMRTAEKNRLHQVHETQVGSVKQLIAHFDRLIDELDKQI
DDHTHTHFDGKAQVAEQIKGIGSITTATLMAMLPELGRLSHKRIASLAGI
APHPRESEETKFKSRCFGGRSAVRKALYMATVAATRFEPLIRDFYQRLLS
KGKPYKVAVTACMRKLLTISNTRMRDYFAENDTAENGIRTA
>gid:334618  NMA0734  putative transposase for IS1106A3
MSTFFRQTAQAMIAKHIDRFPLLKLDQVIDWQPIEQYLNRQKNRYLRDHR
GRPAYPLLSMFKAVLLGQWHSLSDPELEHSLITRIDFNLFCRFDELIIPD
YSTLCRYRNWLAQDDTLSELLKLINCQLTEKGLKIEKASAAVVDATIIQT
AGSKQRQAIEVDEEGQISGQTTPSKDSDARWIKKNGLYKLGYKQHTRTDV
EGYIEKLYITPTNAHECTHLSPLLEGLPKGTTVYADKGYDSAENRQHLEE
HQLQDGIMRKACRNRPLSETQTKRDRYLSKTRGDVFEPVESRQQAKCARC
RPKGDRMPDYRVSRED
>gid:334749  NMA0768  putative transposase for IS1655
MSYTQLTQGERYHIQYLFRHCTVTEIAKQLNRHKSTISREIRRHRTQGQQ
YSAEKAQRQSRTIKQRKRQPYKLDSQLIQHIDTLIRRKLSPEQVCAYLCK
HHQITLHHSTIYRYLRQDKSNGSTLWQHLRICSKPYRKRYGSTWTRGKVP
NRVGIENRPAIVDQKSRIGDWEADTIVGKGQKSALLTLVERVTRYTIICK
LDSLKAEDTARAAVRALKAHKDRVHTITMDNGKEFYQHTKITKALKAETY
FCRPYHSWEKGLNENTNGLIRQYFPKQTDFRNISDREIRRVQDELNHRPR
KTFGYETPSVLFLNLFQPLIH
>gid:334758  NMA0769  putative transposase for IS1016
MKITHCKLKKKVQKELLRFFVLEVTARSAADILGIHPNSAALLYRKIRTV
INHHLALAADEVFEGSVEPDESDFGGRRKGRRGRGAAGKVVVFGILKRNG
RVYTVVVDNAKSETLLPVIKKKIMPDSIVYTDSLSSCDKLDVSGFIHYRI
NHSKEFADRQNHINGIENFWNQAKRVLRKYNGIDRKSFPLFLKECEFRFN
FGTPSQQLKILWDLGLI
>gid:334762  NMA0772  putative DNA-invertase
MRNAVGLDISAKTFDVVTIINGETDYRKFSNDEQGCKNLKEWISAKREKD
IYVCMEATGNYYEQAADCLAEEYHVSVINPLKIKAYAQKRFSRVKNDKQD
AKLIAEFCQTALIEELPKREKPTEQQYSLKRLLSLQSQLLEQQTSQKNRI
KAAKDSFVQKIHEKQLKELENHLNAVKKKIDQTIKSDKKMKELTKRLETI
PSVGKTTAISLMSYLINSTFENAKQFTAYAGLNPHQNISGTSVNKKSKMT
KYGNRRIRGSLFMAALVAFKNNYFPAFTNRLKKAKKPKMLIIGALMRKIL
VVAFNLYKTETDFDKTRYQTA
>gid:334782  NMA0782  putative phage replication protein
MRAEDRAETAGACVGAPCAPQTATPLNAPPRLIGGEQKNPNLQGGEQPIE
ILESHQVEFEYFSQYVTDGKGRLIEIPLRRGREDGAFIDQITFTIHEESI
PKVTQKAYVTDAEYLAKYSELLQEILGFGISAKLPYKGKFFYQSCYQLGP
TNVEYGKVHYGGQRETILVELNGTGCTAAKPGWENRLYEFLQKCVRPKIT
RVDVAHDFFNGEYTPQHALTDHDNGFFDCHNVRPKSECKGVAWRHEDGSG
KSFYIGKRGNAKYTRIYEKGKQLGDKSSPWVRFETEFRNGDIEVPIDILI
HAGSYIGGAYPVCEQIFKCEAKRMDSTVKEVNLTFEHKQFYARQQVGKWV
NFLKDIGWTAEDIVKDLTKGVEGYPKGLQPEEYDSSNACAFYIHEEQKAI
NALNIEVLELELNQEKQYEYPQDRQKQHERDYDKEQYQISDQLEDWKYL
>gid:335219  NMA0903  hypothetical protein NMA0903
MIMLFEGLPCLAVWCKNRLSAVLPVGGLNVSENLLEIETHPFDSVLPPKA
AVMMMGTFPPKEDKRAMQFHYPNFQNDMWRVYGLVFFNDAAHFQRLSEKA
FDAEKIKAFLHERGIASCPTVLKAAREHGNASDKFLKVVETVDLAAVLAK
IPDCRHICTTGGKATEILLDIQGGGIKMPKTGETVPFPFAGRDLTLTRLP
STSRAYPLSLAKKAAAYRAFFEMAGLCEKQL
>gid:335539  NMA0982  hypothetical protein NMA0982
MHIIDSHCHLNFEGLKERLPEVLSNMEANGVGQALAISVSRESFSEVFAV
AEAHEHIYCTIGVHPDSREAEEFSIAEMVEAAAHPKVVGIGETGLDYYWC
KGDLSWQHKRFADHIEAANQTGLPVIVHTRDAAADTLAILKECKTNSGVI
HCFSEDTAFARAAMDLGLYISFSGIVTFKNAPLVQEAAKYVPDDRILVET
DAPFLAPVPKRGRQNEPAFVRHTAEHIAKLRNQTLEQVAAYTTENFYRLF
KKVPDMRAV
>gid:336028  NMA1115  putative transposase for IS1106A3
MSTFFRQTAQAMIAKHIDRFPLLKLDQVIDWQPIEQYLNRQRTRYLRDHR
GRPAYPLLSMFKAVLLGQWHSLSDPELEHSLITRIDFNLFCRFDELSIPD
YSTLCRYRNWLAQDDTLSELLKLINCQLTEKGLKIEKASAAVVDATIIQT
AGSKQRQAIEVDEEGQISGQTTPSKDSDARWIKKNGLYKLGYKQHTRTDA
EGYIEKLYITPTNAHECTHLSPLLEGLPKGTTVYADKGYDSAENRQHLEE
HQLQDGIMRKACRNRPLSEVQTKRNRYLSKTRYVVEQSFGTLHRKFRYAR
AAYFGLIKVSAQSHLKAMCLNLLKAANRLSAPAAA
>gid:336193  NMA1155  hypothetical protein NMA1155
MSNISASRAAYMDVQKQYPFETVAVCVLPNHIHAIWTLPPDDADYSLLRR
LIKTKFSAYSPYTKNLSAGKQRQHERGIWQRRFYGHTVRDETDLQRCADY
IHSNPIKQKMSRAKTESCKK
>gid:336265  NMA1167  putative phage protein
MEDEDFIRAASMLAEEVFGFGIYKESKGSGGRFYERCWLMGSEDVLYGRV
HFGGQNNTILFELTGTGCGVAKEGWESRLFAFLTNAIRPKITRVDIAKDF
FNGEYSPNQAREDRNKGMFTCHHVKPKGECLGSDWEEDDEAKMTKGKTYG
IGSRESSKYVRVYEKGKQLGDKTSTWTRFEIEFKAKDIVIPFEVLQNPGE
YFGGAYPICERFVQKATRIHAVKEDKVISADRYLEWVKKQFGRAANGLKF
IFPELDKAKLFELIEPSHHKLPKSLAPEAYDCAFLKAQAIHEQPAFKPYK
DPYYMYEYYENLEKQLEQQKHVNNEESYNNFIYDKFARLPISWA
>gid:336322  NMA1185  putative transposase
MLIHYIDIAKRNFVIAVSSLSKTKTETNNPKGIAHTVEYLKKHKVALVVT
ESTGGLEIPAAKAIRRAGIAVIIANPRQTHQFAQSQPLTKTDAKDAKMPA
FFAQMKAQKEDWQTMPYHPPTEAEEVLEALVNRRNQPADMRTAEKNRLHQ
VHETQVESVKQLIAHFDRLIDELDKQIDDHTHTHFDGKAQVAEQIKGIGS
ITTATLMAMLPELGRLSHKRIASLVGIAPHPRESGETKFKSRCFGGRSAV
RKALYMATVAATRFEPLIRDFYQRLPSEGKPYKVAVTACMRKLLTISNAR
MRDYFAENDTAENGIRTA
>gid:336346  NMA1199  putative transposase for IS1106A3
MSTFFQQTAQAMIAKHIDRFPLLKLDQVIDWQPIEQYLNRQRTRYLRDHR
GRPAYPLLSMFKAVLLGQWHSLSDPELEHSLITRIDFNLFCRFDELSIPD
YSTLCRYRNWLAQDDTLSELLKLINCQLTEKGLKIEKASAAVVDATIIQT
AGSKQRQAIEVDEEGQISGQTTPSKDSDARWIKKNGLYKLGYKQHTRTDA
EGYIEKLHITPANAHECKHLSPLLEGLPKGTTVYADKGYDSAENRQHLKE
HRLQDGIMRKACRNRPLSEAQTKRNRYLSKTRYVVEQSFGTLHRKFRYAR
AAYFGLIKVSAQSHLKAMCLNLLKAANRLSAPAAA
>gid:336442  NMA1217  putative transposase for IS1106A3
MSTFFRQTAQAMIAKHIDRFPLLKSDQVIDWQPIEQYLNRQRTRYLRDHR
GRPAYPLLSMFKAVLLGQWHSLSDPELEHSLITRIDFNLFCRFDELSIPD
YSTLCRYRNRLAQDDTLSELLELINRQLTEKGLKVEKASAAVVDATIIQT
AGSKQRQAIEVDNKGQVSGQTTPSKDGDARWTKKNGLYRLGYKQHTRTDA
EGYIEKLHITPANTHECNHLLPLLEGITEGTTIYADKGYDSAENRTSGRT
SVVRRHYARAAYFGLIKVSAQSHLKAMCLNLLKAANRLSAPAAA
>gid:336449  NMA1221  putative phage integrase
MMGKPGKSSRPSALLSARWQDIDLTARLWHIPAADMKTKHPFTVPLSDWA
VEILRELHTQTGDNIHLFPGIRPRRKPAPHPDHISIKFAHNAIRRLGYDG
STPGKSKHTMHGFRHLFTNISLTAGKDTLTTDLALGHISRAALQRAGFSS
LHHYLTADSYRLQERRELAEWYSRRHRQAYEAAAQNTCNKT
>gid:336478  NMA1234  putative transposase
MPSVELLLVIVGLPRGTFYYQLAVQSAEDKYADLKRHIHDIYRRHKGRYG
YRRIAAAIRHAGTPVNHKKVSRLMAKTGLKAVIWRRKYRSFKGEVGKIAP
NILRRCFHAEKPNEKWVTDVTEFNVGGEKIYLSPIMDLFNGEIVSYRIQT
RPTFDLAGEILKGAPEKPRSSEKPILHSDQGWQYQMFFYSGLNLNQDRAM
KPQTVQIVRQGEATPYWFKFNPLYNNDRIKLKLKGLSLVQYRIQSLKAA
>gid:336540  NMA1253  putative transposase for IS1106A3
MSTFFRQTAQAMIAKHIDRFPLLKLDQVIDWQPIEQYLNRQKNRYLRDHR
GRPAYPLLSMFKAVLLGQWHSLSDPELEHSLITRIDFNLFCRFDELIIPD
YSTLCRYRNWLAQDDTLSELLKLINCQLTEKGLKIEKASAAVVDATIIQT
AGSKQRQAIEVDEEGQISGQTTPSKDSDARWIKKNGLYKLGYKQHTRTDA
EGYIEKLHITPANAHECKHLSPLLEGLPEGTTVYADKGYDSAENRQHLEE
HQLLDGIMRKACRNRPLSEVQTKRNRYLSKTRYVVEQSFGTLHRKFRYAR
AAYFGLIKVSAQSHLKAMCLNLLKAANRLSAPAAA
>gid:336567  NMA1263  hypothetical protein NMA1263
MDLREVKLGGETIYEGGFVSISRDKVRLPNGNEGQRIVIRHPGAACVLAV
TDEEKVVLVRQWRYAANQATLELPAGKLDVAGEDMAACALRELAEETPYT
TDSVRLLYSFYTAVGFCNEKMYLFEAEGVRLGSTLANDEDEITETVLMSK
EEVRQALANDEIKDGKTLIGLQYWLMKD
>gid:336635  NMA1279  hypothetical protein NMA1279
MIKHAKTTYNKPVYHPSECRTVNQLIFDFAAHDYPSFDKFLGTENAELVY
VLRHKHGQFIYVWGEEGAGKSHLLQAWVAQALEAGKNAAYIDAASMPLTD
AAFEAEYLAVDQVEKLGNEEQALLFSIFNRFRNSGKGFLLLGSEYTPQQL
VIREDLRTRMAYCLVYEVKPLTDQEKIDALASMAAARQVTVDSEIFEYLL
KHWRRDMDSLMMMLDTLDNYAVTMGKRITLPLLRQLLKQQETQ
>gid:336652  NMA1284  putative phage transposase
MEYMDLKSLLNFGLPNMPRTVIGLRKKAQRDGWQTRRRQGKGGGVEYALP
IEIRAAIMKRQSDELAEKMPKTLPQVRPGTAMSAQALAEAAKLLNEKQRS
VADARCAVVVAVLGIKYEYDCSAKAAVAQFLGLLAESKLDAVTLGNLEKA
NDRSRSAKVGERTLDGWISAYLKAENATERLVALAPKTTKAVKPIESYGW
LPMFMQFHNIPSAPKLAHSYRRFVQWAEAENMPVNDVPNLSMVRRVWDKL
PLIMQERGRKTGAAYKSLLPYVKRDWGALKPNDVWIGDGHSFKAKVAHPV
HGRPFKPEVTVIIDGCTRFVVGFSVSLAESCVAVSDALRIGVKHFGLPII
YYSDNGGGQTGKTIDHEITGITSRLGIRHETGIAGNPQGRGIIERWWKDN
LIEMARQYETFASAGMDSSTKNLMYRKMESAFNALEKGKDLTEEQQKYLK
KLPSWSRFIADVVKCIDEYNNRPHGELPRHPDGGHYSPKAYREMRLEQDG
IAPDMLSAEELATMFMPQEVRKVQRGWLDLFNNSYFSTELAEYHKDEVRV
SYDLSDASAVNVFDMDGKFITKAQADGNTREAFPTARIDQLAEKRRKGKI
KRAENAIKLANAEVNPALEQAAVWDELGHLGGNVIEAEYAVLPKTGTDDF
VLFEADR
>gid:337080  NMA1433  hypothetical protein NMA1433
MTDLFAREPYAPLAERLRPHTLDDVVGQEHLIGEGKPLRVAVEGGKPHSM
LLWGPPGVGKTTLARILAQSFNAQFLPVSAVFSGVKDIREAIDKAEIALQ
QGRATILFVDEVHRFNKAQQDAFLPHVESGLLTFIGATTENPSFEVNPAL
LSRAQVYVLQPLSSDDLKKLIAKVLALPEYQEFTIETDAQKLLVNTVDGD
ARRLLNLLEQLLRAADTRRLKNLTAEFLADSLGAQIRRFDKGGESFYNQI
SALHKSVRGSHPNAALYWFCRMLDGGTDPRYLARRIVRIAWEDIGLADPR
ALQIANDAAATFERLGSPEGELALAQAVLYLAAAAKSNAGYKAYNQMRHF
VKENASDEVPVHLRNAPTKLMKELGYGREYRYAHDEPNAYAAGESYMPDG
LDEPDFYQPVPRGLEIKIGEKLAWLKSLDEEVLKAK
>gid:337152  NMA1453  DNA modification methylase
MQQIKFIDLFSGMSGIRKGFEQACRKQSVACECVFTSEIKPAALEVLKQN
YPDEVPYGDITKIETGDIPDFDILLAGFPCQAFSFAGKRLGFEDTRGTLF
FDVARILKAKKPKGFILENVEGLVTHDRKDPTQKIGRTLTVILETLEALG
YYVSWKVLNAKDFGIPQNRKRIYLTGSLKSKPDLSFETSPSPKLKNILES
GLPTESSPFIKKLLKKFPPSELYGKSVKDKRGGKNNIHSWDIELKGAVTE
EEKQLLNILLKERRKKKWASEIGIDWMDGMPLTKAQISTFYKHPDLQNIL
DSLTDKGYLVLEHPKQKIGGQRIKDESLPKGYNIVSGKKSFEINKILDPN
DVAPTLVAMDMEHLFVVDNGGLRTLTGKEGLRLFGYPDDYSFDIPKKDRC
DLLGNTVAVPVIKAVSERLLHTL
>gid:337244  NMA1481  putative transposase for IS1655
MSYTQLTQGERYHIQYLFRHCTVTEIAKQLNRHKSTISREIRRHRTQGQQ
YSAEKAQRQSRTIKQRKRQPYKLDSQLIQHIDTLIRRKLSPEQVCAYLRK
HHQITLHHSTIYRYLRQDKSNGSTLWQHLRICSKPYRKRYGSTWTRGKVP
NRVGIENRPAIVDQKSRIGDWEADTIVGKGQKSALLTLVERVTRYTIICK
LDSLKAEDTARAAVRALKAHKDRVHTITMDNGKEFYQHTKITKALKAETY
FCRPYHSWEKGLNENTNGLIRQYFPKQTDFRNISDREIRRVQDELNHRPR
KTLGYETPSVLFLNLFQPLIH
>gid:337259  NMA1486  putative transposase for IS1655
MSYTQLTQGERYHIQYLFRHCTVTEIAKQLNRHKSTISREIRRHRTQGQQ
YSAEKAQRQSRTIKQRKRQPYKLDSQLIQHIDTLIRRKLSPEQVCAYLRK
HHQITLHHSTIYRYLRQDKSNGSTLWQHLRICSKPYRKRYGSTWTRGKVP
NRVGIENRPAIVDQKSRIGDWEADTIVGKGQKSALLTLVERVTRYTIICK
LDSLKAEDTARAAVRALKAHKDRVHTITMDNGKEFYQHTKITKALKAETY
FCRPYHSWEKGLNENTNGLIRQYFPKQTDFRNISDREIRRVQDELNHRPR
KTLGYETPSVLFLNLFQPLIH
>gid:337263  NMA1487  putative transposase for IS1016
MKITHCKLKKKVQKELLHFFVLEVTARSAADILGIHPNSAALFYRKIRTV
INHHLALAADEVFEGSVEPDESDFGGRHKGRRGRGAAGKVVVFGILKRNG
RVYTVVVDNAKSETLLPVIKKKIMPDSIVYTDSLSSCDKLDVSGFIHYRI
NHSKEFADRQNHINGIENFWNQAKRVLRKYSGLTKIRTRRRSRRQYR
>gid:337311  NMA1500  putative modification methylase
MKNKIQNQLDNIVTLNNEKFTFIDLFAGIGGFRIAMENVGGRCVFSSEWD
DKARQTYQVNFNDIPYGDITLKETKAAIPSKFDVLTAGFPCQPFSIAGVS
KKKSLGRETGFLDKAQGTLFFDVAEIIGKHRPKIFLLENVKNLVSHDKGN
TFKVIKGTLEELDYQIFYQVMNAKYYVPQNRERIFIVGFDRQYFNKEINF
NFPSPPESQPKLKQILEDDVDNSFTLSDNLWLYLQNYAKKHKAKGNGFGF
GLVDLDGISRTLSARYYKDGSEILIPQKGKNPRKLTPRECSRLMGFPKDF
VIDAVSKTAAYKQFGNSIAVPLVQAIAKQIINELKNE
>gid:337459  NMA1543  Insertion element IS1016 transposase
MLPSKYEDNALQIKEKSTERTAPFFVLEVTARSAADILGIHPNSAALFYR
KIRTVINHHLALAADEVFEGSVEPDESDFGGRHKGRRGRGAAGKVVVFGI
LKRNGRVYTVVVDNAKSETLLPVIKKKIMPDSIVYTDSLSSYDKLDVSGF
IHYRINHSKEFADRQNHINGIENFWNQAKRVLRKYNGIDCKSFPLFLKEC
>gid:337484  NMA1551  conserved hypothetical protein
MHKIPKGTALAFDFGEARIGVAQGDAELGLSHPLATVTGGSNDEKFAAIA
KLVQEWQPRYFVVGLPVHTDGTKHEMTHLSRKFGRRLNGRFNLPVYWVDE
RLSSVYAESLLSEAQVFGKKRKSVLDQVAAQAILHGFFEGGPAECFNGRE
G
>gid:337648  NMA1580  putative ATP-dependent RNA helicase
MSIKFADLNLDKNILSAVSSEGYESPTPIQAQAIPFALEGRDIMASAQTG
SGKTAAFLLPTLQRLTKRSEKPGKGPRALVLTPTRELAAQVEKNALAYAK
NMRWFRTVSIVGGASFGYQTRALSKPVDLIVATPGRLMDLMQSGKVDFAR
LEVLILDEADRMLDMGFIDDIETIVEATPEDRQTLLFSATWDGAVGKLAR
KLTKDPEIIEVERVDDQGKIEEQLLYCDDMRHKNRLLDHILRDADIDQCV
IFTSTKAMTEVIADELYEKGFAANCLHGDMPQGWRNRTLMDLRKGRCKIL
VATDVAARGIDVPTITHVINYDLPKQAEDYVHRIGRTGRAGRTGIAITFA
EVNEYVKVHKIEKYINRKLPELTIEGMEPTRKRKSAGGKPKGKGGWGDRK
SGGWRGDHKPSKEGFGGKTRGEGFKKEGFKRDGFKKTGEGFKGKRKAGDS
FAGKGERRYKDR
>gid:337687  NMA1589  conserved hypothetical protein
MKTDIQTELTQALLPHEKVWANEEKTILAKNILLDLVEKTDPTIIGLLLS
NDELKRHFFVEVNGVLVFKLQDFRFFLDKHSVNNSYTKYANRIGLTDSNR
FLKDSSDIVLDFPFKDCVLNGGQSTEEGEEIYFKRNNSQPANYTPN
>gid:337689  NMA1590  putative type III restriction/modification system modification methylase
MKLIYIDPPYYFVKKKQQDSFGYNTNFKLSTWLTFMKNRLSIAKELLTDD
GIIVISIDDDGNAYLKILLDEIFGFENFIGNLPTIMNLKGNNDEYAFAGT
HEYTLVFAKNKDKSTFYEFPIDEDNFLEKWEEDEIGFYKKGAPMRATGTE
DKREDRPEMFYPFLVKNNTVSTITDEEFSQIYNKDLEVFNDDFIQKLKEK
YENLGYNFILPIANKQWGRWRWGYSIKNKARLQTDIIVSQSKNGISLYKK
QRPELDDLPTKKPKTIFYKPEYSSGNGTEQMKNLFGEKAFKNPKPEELIQ
DFITITTNENDIVLDYHLGSGTTAAVAHKMNRQYIGIEQMDYIETLAVER
LKKVIDGEQGGISKAVNWQGGGEFVYAELAPFNETAKQQILACEDSDGIK
TLFEGLCERYFLKYNVSVNEFSQIIQEPEFQSLALDEQKQMVLEMLDLNQ
MYVSLSEMDDEQFAGCLNDDDKALSREFYQSAKNQAEKKDGE
>gid:337725  NMA1600  putative transposase
MRKSRLSRYKQNKLIELFVAGVTARTAAELVGVNKNTAAYYFHRLRLLIY
QNSPHLEMFDGKVEADESYFAERQNHINGIGNFWNRAKRHLRKFDGIPKA
HFELYLKGYERRFNNSEIKVQISILKQLVKSSLS
>gid:337730  NMA1601a  putative transposase fragment
MRLKKQTGSLKHQVTGLNAVKSDRQKPAQYVGQHQDAYLHEIAKHFDCTA
ATICYALKQMGITRKKRPPLTKNKTRPK
>gid:337803  NMA1618  insertion element IS1106 transposase
QPAAQDDTLSELLKLINCQLTEKGLKVEKASAAVVDATIIQTAGSKQRQA
IEVDEEGQVSSQTTPSKDKDARWIKKNGLYKLGYKQHTRTDAEGDIEKLH
ITPANAHECKHLSPLLEGLPEGTTVYADKGYDSAENRQHLEEHQLLDGIM
RKACRNRPLSEVQTKRNRYLSKTRYVVEQSFGTLHRKFRYARAAYFGLIK
VSAQSHLKAMCLNLLKAANRLSAPAAA
>gid:337804  NMA1619  insertion element IS1106 transposase
MSTFFRQTAQAMIAKHIDRFPLLKLDQVIDWQPIEQYLNRQRTRYLRDHR
GRPAYPLLSMFKAVLLGQWHSLSDPELEHSLITRIDFNLFCRFDELSIPD
YSTLCRYRNRRRKTTPCPNCSN
>gid:337813  NMA1621  insertion element IS1016 transposase
MKITHCKLKKKVQKELLRFFVLEVTARSAADILGIHPNSAVLFYRKIRMV
ISHYLALAANEVFEGSVELDESYFGGRRKGKRGRGAAGKVVVFGILKRNG
RVYTVVVDNAKSDTLMPVIKQKIMPDSIVYTDSLSSYDKLDVSGFIHYRI
NHSKEFADRQNHINGIENFWNQAKRVLRK
>gid:337835  NMA1628  hypothetical protein
MTTILAFDIETVPDVQCIRTLYDLPSSLPDDEVVLFAQQKRRAQTGGDFM
QHHLHQIVAISCCMRWGQDKVHVGTIGEMDDGEEVVIAKFFELIEKHTPQ
LVSWNGGGFDLPVLHYRSLLHGINAARYWDMGDGDFGDSRDFKWNNYISR
YHQRHCDLMDLLALYQPRANVPLDDMAKLCGFPGKLGMDGSKVWEAFHAG
RLKEIRNYCETDAVNTYLMYLRFCLVSGRFDADEYEMEIKRIRNYLSAQT
EDKPHWAEFVQAWK
>gid:337851  NMA1634  putative ATP-dependent RNA helicase
MSNPFSSLGLGTELVSALTAQGYENPTPIQAAAIPKALAGHDLLAAAQTG
TGKTAAFMLPSLERLKRYATASTSPAMHPVRMLVLTPTRELADQIDQNVQ
GYIKNLPLRHTVLFGGMNMDKQTADLRAGCEIVVATVGRLLDHVKQKNIH
LNKVEIVVLDEADRMLDMGFIDDIRKIMQMLPRQRQTLLFSATFSAPIRK
LAQDFMNAPETVEVAAQDTTNANVEQHIIAVDTIQKRNLLERLIVDLHMN
QVIVFCKTKQSVDRVTRELVRRNLSAQAIHGDRSQQSRLETLNAFKDGNL
RVLVATDIAARGLDIAELPFVINYEMPAQPEDYVHRIGRTGRAGADGVAI
SLMDESEQKMFESIKELTGNKLLIERIEGFEPQWWEQGGAKPEKPEMREP
RQRNRYESAKAQREKNTRPENAANDAGAACGKIAGRSRRSRREHRTCALL
QPRYGVK
>gid:337905  NMA1641  putative insertion element IS1106 transposase
MLIHYTLCRYRNWLAKDDTLSELLELINRQLTEKGLKIEKASAAVVDATI
IQTAGSKQRQAIEVDNKGQVSGQTTPSKDSDARWIKKNGLYKLGYKQHTR
TDAEGYIEKLHITPANAHECKHLSPLLEGIAEGTTVYADKGYDSAENRQH
LEEHQLQDGIMRKACRNRPLSETQTKRNQYLSKTRYSGLNLNQDKATKPQ
TVQIVRQGEATPYWFKFNPLYVVEQSFGTLHRKFRYARAAYFGLIKVSAQ
SHLKAMCLNLLKAANRLSAPVAA
>gid:338073  NMA1661  impB/mucB/samB family protein
MSSRKIIHIDMDAFYASVELREQPHLKGRPVVVAWEGARSVICAASYEAR
QFGLHSAMSVATAKRLCPQAVYVPPHFDLYRQVSAQIHAVFRRYTDLIEP
LSLDEAYLDVTRNFKNIPYASEVAKEIRAAIFAETGLTASAGIAPNKFLA
KIASDWRKPNGQFVLPPHKVMAFLETLPLGKIPGVGKVTLKKMQSLGMQT
AGDLRRFERGELLNHFGRYGYRLYDLARGTDERPVKAERECLQISTEITL
PEDLPLEQAAGHLPHLAEDLWRQITRKNVEAQSVTLKLKTYDFRIITRTL
TYSSVLPDCTALLQAAQMLMARVPPQTEDAFRLIGIGVGHLVPKNQQQDL
WA
>gid:338092  NMA1665  putative DNA polymerase III subunit
MLFEFKENKMIVASRWPLLEKVFLRFGMPVAVVDLESTGGNLYEDRVTEV
ALVKFEQGRVVRHEWLVNPQKPIPQFVAGLTGISDGMVADAPVFAEIAGE
LFSVLKGCVLVAHNSRFDYTFLKHEFHRAGIGFSSPALCSVQLSRCLYPQ
FYKHSLDSIIERLGIVVEDRHRAMADVSALCDYLEYSLSEHGVEAWIRQC
FRLMNPKPLPAALPERLREQLYGLPDGMGVLACFDGGGKVNYIGTFERVY
SEVSALLDSGKAPFDWCNTEEVRFFPALGSLHAYKIKAELVGRYHSGCYV
SAKNLLKTFTTVRFEKGSDGMLNAKTAALKNGVTDNPPTGLFANKKAARR
ALSSWAETYGLCPASAGILPDGYAEDEPCPVYVSGRCDKACGRSDEQVLA
FAHKLPILDWGKMHEVEITETDPLTGEKVVLHGMGGALEMGDGLWYFDKD
LPDAFKAKFKTDRKNIKEIG
>gid:338143  NMA1675  conserved hypothetical protein
MTDDAVRLALRQAVMAVRERYPFEILAWVLMPDHLHTIWRLPDNDSAYSE
RWRQIKRHSQYLIGGNLRLWQKRFWEHTIRDEADFACHFDYLHFNPVKHG
YVGQISDWGFSTFHRYVKQGIYPHNWGGGNADFSIGYD
>gid:338358  NMA1710  putative nuclease
MFRRHRHLKNMQIKKIMKWLPVALSLLGALGYTGYGSEAVRTAVAVLDVL
GAAGDAGSDAPARRRASAKSGHRYTGTVSKVYDGDTLHVIDGDGAKHKIR
MAYIDAPEMKQAYGTRSRDNLRAAAEGRKVSVRVFDTDRYQREVAQVSVG
KTDLNLMQVQDGAAWHYKSYAKEQQDKADFADYADAQIQAERERKGLWKA
KNPQAPWAYRRAGRSGGGNKDWMDAVGEWLGIW
>gid:338415  NMA1728  putative methylated-DNA-protein-cysteine methyltransferase
MPQPDPQGFRRSLFLHRRAGMAKIGDFAVKSMIEIRSKRMITLPSLNNLP
SKWDEIRYWLETRVCECGVMSHPNLTECEAGQFDRDFWDNIGCAPEEYVR
IRRAIRLLEARYPDSLNELVCAAIATPLGEMLAVFGNKGLCLLEFVGQKH
LEQEIAAVQKALRGRFVFREDERTQLLRQELDLYFKGRLKTFATPLEQIG
TEFQKQAWDALLAIPYGETRSYKEQAQRLGNPNAVRAVAAANGQNKVSIL
IPCHRVIGSDGKLTGYAGGLNRKQFLLALERGEVQTALF
>gid:338457  NMA1738  insertion element IS1106 transposase
MIAKHIDRFPLLKLDQVIDWQPIEQYLNRQRIRYVRDHRGRPTYSLLSMF
KSVLLGQWHSLSDPELEHSLITRIDFNLFCRFDELSIPDYSTLCRYRNWL
AQDDTLSELLELINCQLTEKGLKVEKASAAVIDATIIQTAGSKQRQAIEV
DEEGQISGQTTPSKDSDARWTKKNGLYRLGYKQHTRTDAEGYIEKLHITP
ANAHECKHLSPLLEGLPEGTTVYADKGYDSAENRTSGRTSVVRRHYARAA
YFGLIKVSAQSHLKAMCLNLLKAANRLSAPAAA
>gid:338562  NMA1741  remnant of insertion element IS1106 transposase
MSTFFQQTAQAMIAKHIDRFPLLKLDQVIDWQPIEQYLNRQKTRYLRDHR
GRPAYPLLSMFKAVLLGQWHSLSDPELEHSLITRIDFNLFCRFDELSIPD
YSIVD
>gid:338711  NMA1775  insertion element IS1106A3 transposase
MSTFFQQTAQAMIAKHIDRFPLLKLDQVIDWQPIEQYLNRQRTRYLRDHR
GRPAYPLLSMFKAVLLGQWHSLSDPELEHSLITRIDFNLFCRFDELSIPD
YSTLCRYRNRRR
>gid:338713  NMA1776  insertion element IS1106A3 transposase
AQDDTLSELLKLINCQLTEKGLKVEKASAAVVDATIIQTAGSKQRQAIEV
DEEGQVSSQTTPSKDKDARWIKKNGLYKLGYKQHTRTDAEGYIEKLHITP
ANAHECKHLSPLLEGLPEGTTVYADKGYDSAENRQHLEEHQLLDGIMRKA
CRNRPLSEVQTKRNRYLSKTRYVVEQSFGTLHRKFRYARAAYFGLIKVSA
QSHLKAMCLNLLKAANRLSAPAAA
>gid:338776  NMA1792  hypothetical protein
MTNRGGAKLKTNSKSSERMSEVEYFSHFISDGKGKLLEIPQRRGKQDGVF
VDWISFTFHEDTLLKVSGCPLFSDAEYMYVLSRKLEEILGFGITRKCKSR
GNKFYESMYRLGSDDVDYGEVHFGGQRNTVLVELKGTGCSVASPGWELRL
KQFLDDSIRTRITRIDLALDFFDGEYTPDQALLDHDNGFFDNSNQRPKSE
TIGTAWRNEDGSGKTFYVGRKKNSRFVRVYEKGRQLGDKESKWVRFEIQF
NYGDIEIPLDILINQGSYFCGAFPICRKFKNMPVPERFDQRKKTLNLTFE
HKLHYAKNAVGKLVNFMIEMGFDNSEIVESLKADSGFPKGLEPEKYALEM
LRDGLKHGFIHEQPDIDLEIELDELGVIAFKNSDKFDREKRLFSPDYDVE
KERKYQEYLSKVYHQNVDYDYF
>gid:338788  NMA1800  putative invertase/transposase
MNIIGLDISKDTIDATLHKTNGSIHYIKFKNNDDGLKQFRLWIKGNRIRK
AYIGMEATGIYYEKAADMLSSYYTVYVINPLKIKDYGKSRFNRTKTDKAD
SNLIADYIKRHQDTLIPYQIPKNKALQKLINLKNQLQQHQKQIKNRLHST
EEDFIRNIHQDLIDTIQDKMEQVKIAISEQIKKQTDNNHYRNLQTIPSIG
KDTASVLYAQLTEKHFKTANQFVSYAGLSPAIIQSGTSVRGRGRLSRYGN
RRLKSTLYMPALCAYRFNAFPKLINNLKKAGKPKMVIIVAIMRKLAKLAY
YIVKTGQPYDAERHRLNQ
>gid:338870  NMA1814  insertion element IS1655 transposase
MSYTQLTQGERYHIQYLFRHCTVTEIAKQLNRHKSTISREIRRHRTQGQQ
YSAEKAQRQSRTIKQRKRQPYKLDSQLIQHIDTLIRRKLSPEQVCAYLCK
HHQITLHHSTIYRYLRQDKSNGSTLWQHLRICSKPYRKRYGSTWTRGKVP
NRVGIENRPAIVDQKSRIGDWEADTIVGKGQKSALLTLVERVTRYTIICK
LDSLKAEDTARAAVRALKAHKDRVHTITMDNGKEFYQHTKITKALKAETY
FCRPYHSWEKGLNENTNGLIRQYFPKQTDFRNISDREIRRVQDELNHRPR
KTLGYETPSVLFLNLFQPLIH
>gid:339043  NMA1882  putative transposase
MLISAVELAGLQLPKLPNSRQGIEYHAKKNNWPFEEVVGQARGGKLKKYL
VSALPSEIQAAIQEKQAATLLAKVPMLPAEVKKPLRQNKKMRQLGLIPCE
EGLARLDDRQTETAHARCAIVAYVLPLHELAGMPIKKAVAFVAAEAAAGR
LPEDVAKLIPLANARNNGERSLSEPTLYRWVRAYRAASDSMSRLLALAPV
KTREKTPLLAIDWLPYFLMFYQRPNKPTMMAAAKKLAQWYLEQGKIEQMP
SYDQIQTVMKRLPEHMKERGRRTGSAYKALLPYIDRDWTALKPNDVWVGD
GHSFKAKIRHPMGYLFTPEVTMIVDGCSGAVVGWSVALSETAVAVADALR
HGMTHFPPPLGYYSDNGSGETGDMLDKETTGILPRIGIEHFTGIPGNPQG
RGKIERLWQTITIPLAKQYATYQGKDADAETLRKVSNALASAQKVQKKGK
ELSKAQEAALSAAPTWAQFIADLEEAVRRYNFEHEHRSLPKNPEAGRHFT
PMKYYEYRMETDGMRVKTDVLSPLELDFMYRPEEERIPDRGAVSLHNNTY
FHQELLDYSGQKVRVAYDIHDADHVIVKDMQGKVICKAVFNGNKRAAFAE
TRMEQLAERRRKGQAKRLQDKMDLIEAQRQSAAPIIEQQPDFGEFLKLET
ESGGLVEVENRPSESGRGKKKLRDFLWEDAG
>gid:339204  NMA1907  insertion element IS1016 transposase
MRKSRLSQYKQNKLIELFVAGVTARTAAELVGVNKNTAAYYFHRLRLLIY
QNSPHLEMFDGEVEADESYFGGQRKGKRGRGAAGKVAVFGLLKRNGKVYT
VTVPNTQTATLFPIIREQVKPDSIVYTDCYRSYDVLDVREFSHFSFAETS
F
>gid:339203  NMA1907A  insertion element IS1016 transposase
FRINHSTHFAERQNHINGIENFWNQAKRHLRKFNGIPKAHFELYLKECEW
RFNNSEIKVLVPF
>gid:339223  NMA1915  putative DNA transport competence protein
MLCPEKMSGMAGQYPYGVRSGLRRNGLKLWDIHFRMTRFIVARCGLLFAT
LKGKTMKKMFVLFCMLFSCAFSLAAVNINAASQQELEALPGIGPAKAKAI
AEYRAQNGAFKSVDDLTKVKGIGPAVLAKLKDQASVGAPAPKGPAKPALP
AAKK
>gid:339325  NMA1942  MutT-like protein
MLDREGYRPNVGIILINERNEVFWGKRVREHSWQFPQGGIKPGESPETAM
YRELYEEVGLLPQHVKIIGRTRDWLRYDVPNNWVRREWRGSYRGQKQIWY
LLRLTGRDCDVNLRATRHPEFDGWRWHQYWAPVDEVIDFKRDVYLGALKE
LSSRFLRGMESYEDFAARQSSDNR
>gid:339344  NMA1946  conserved hypothetical protein
MRRPYTASLAALPYFYVNLPHCGIEMNFTDTHCHLADAALRENLPHILTA
AREAGVGRFIVPATRPQDWQDVADLAQRLSENPLWGNIHIALGIHPWFSD
DVSEPDFQLLEQTLKAHPTAWVGEIGLDFYDKTQTPPQRERQIQVFVRQL
EIAQTLRRRVIIHNLKATADIAAAVKQTGFAQGGIVHAFSGSAEEARVLT
KLGFKIGIGSLLLNPNARKVRDTLKALNDGDFVLETDSPFMLKKEINTPA
NIPGIAKIAAEIRGTCVEEIAKVTERNADALLGR
>gid:339387  NMA1956  insertion element IS1016 transposase
MLPSKYEDNTLQIKEKSTERTAPFFVLEVTARSAADILGIHPNSAALFYR
KIRTVINHHLALAADEVFEGSVEPDESDFGGRRKGRRGRGAAGKVVVFGI
LKRNGRVYTVVVDNAKSETLLPVIKKKIMPDSIVYTDSLSSCDKLDVSGF
IHYRINHSKEFADRQNHINGIENFWNQAKRVLRKYNGIDRKFFPLFLKEC
EFRFNFGTPSQQLKILRDWCGI
>gid:339533  NMA1999  putative phage protein
MEDEDFIRAASMLAEEVFGFGIYKESKGSGGRFYERCWLMGSEDVLYGRV
HFGGQNNTILFELTGTGCGVAKEGWESRLFAFLTNAIRPKITRVDIAKDF
FNGEYSPNQAREDRNKGMFTCHHVKPKGECLGSDWEEDDEAKMTKGKTYG
IGSRESSKYVRVYEKGKQLGDKTSTWTRFEIEFKAKDIVIPFEVLQNPGE
YFGGAYPICERFVQKATRIHAVKEDKVISADRYLEWVKKQFGRAANGLKF
IFPELDKAKLFELIEPSHHKLPKSLAPEAYDCAFLKAQAIHEQPAFKPYK
DPYYMYEYYENLEKQLEQQKHVNNEESYNNFIYDKFARLPISWA
>gid:339719  NMA2030  conserved hypothetical protein
MNTLYTLFATCPRGLETVLSQELESLGCTDVQVFDGGVSCRGGLEQVYAA
NLHSRTASRILLRLTKGTYRNERDIYKLAKNINWFNWFTLQQTFKVKVEA
KRANVKSIQFVGLTVKDAVCDAFRDIYDARPSVDKAAPDVRIHAFLDERN
VEIFIDTSGEALFKRGYRLDTGEAPLRENLAAGLLLSAGYDGTQPFQDPF
CGSGTIAIEAAWIAARRAPGMMRRFGFEKLQNFDKTLWSDLRRRAEAQVK
PAFAPISGSDSDRRIIQTALANARSAGVDDIVSFSVADAQSVRPNGVGGI
MVSNPPYGVRLEEVRVLQALYPQLGTWLKKYYAGWLAAMFTGDREMPKFM
RLSPKRKIPLYNGNLDCRLFLIDMVQGSNR
>gid:339725  NMA2032  MutT-related protein
MTQDTRPLIRVVAGILLNRDGDYLLSSRPEGKPYAGYWEFAGGKVEAGET
DFQALQREFEEELGIRILAATPWLTKIHSYEHARVCLKFLWVNPDQWMGE
PQSREGQEWSWQKAGDFTVAPMLPANGALLRSLSVPRRLYGSLKTGLYGE
NSMGAYRVLPLGSAEGSGANVLMEAAQWQDRPEHADSVWMMVQTREQWRQ
AQEKGADAVVWRVCDDVQAQEAAEALRQGVSVPLVLAANGQTVARYGKLW
LGLGAHVVVRDETIGKNHE
>gid:340013  NMA2085  putative transposase fragment
MPYYLYCLRLRRLVLIFVNPLYLHQIHETQVGSVKQLIAHFDRLIDELDK
QIDDHTHTHFDGKAQVAEQIKGIGSITTATLMAMLPELGRLSHKRIASLV
GIAPHPRESGETKFKSRCFGGRSAVLKALYMATVAATRFEPLIRDFYQRL
PSEGKPYKVAVTACMRKLLTISNARMRDYFAENDTAENGIQTA
>gid:340141  NMA2126  hypothetical protein
MNASNWSLYLILCENSAFYCGISPNPQQRLAAHTAGKGAKYTRVFKPVAM
RIVAGGMDKGTALRQEIAVKKLTAAQKRKLWEQAEKMPSET
>gid:340402  NMA2184  putative transposase (fragment)
FLLIRYILDNARFHRMGVLREMAEKLGHKVLPLAPYSPELNPIEKVWANI
KRYLRTVLSDYARFDDALLSYFDFN
>gid:340405  NMA2185  insertion element IS1016C2 possible transposase
MKITHCKLKKKVQKELLRFFVLEVTARSAADILGIHPNSAALLYRKIRTV
INHHLALAADEVFEGSVEPDESDFGGRRKGRRGRGAAGKVVVFGILKRNG
RVYTVVVDNAKSETLLPVIKKKIMPDSIVYTDSLSSCDKLDVSGFIHYRI
NHSKEFADRQNHINGIENFWNQAKRVLRKYNGIDRKFFPLFLKECEFRFN
FGTPSQQLKILRDWCGI
>gid:340412  NMA2187  putative DNA transport competence protein
MLCPEKMSGMAGQYPYGVRSGLRRNGLKLWDIHFRMTRFIVARCGLLFAT
LKGKTMKKMFVLFCMLFSCAFSLAAVNINAASQQELEALPGIGPAKAKAI
AEYRAQNGAFKSVDDLTKVKGIGPAVLAKLKDQASVGAPAPKGPAKPALP
AAKK
>gid:340463  dinG  probable ATP-dependent DNA helicase
MLTDLEKNAIRDHYQNIGKNLPGFRPRASQREMIAAVANAFSRTLTREEG
EEAPKREGESIAVIEGPTGVGKSLAYLLAGGIMAQTRGKRLIVSSATVAL
QEQLVDRDLPFLVEKSGLELTFALAKGRGRYLCPYKLYQLTQNNAQQNLL
GFEAPEVLWDSKPKPEELNLLRDIADEFSARRFNGDRDTWPEKIDDAIWL
KVTNDRHGCLKAACPNRAECPFYLARDMLETVDVVVANHDLLLADISMGG
GVILPAPENSFYCIDEAHHLPKKALSRFAAEHSWNIAVWTLEKLPQLTGK
IAALTDKAELANLADEAASSLLDSLHEWQFHLAEEPSLSLGPSENDRRTN
SEPTWLWEDGKIPEGLETTVSNTAIAARSLLKHVIGLNDALSAARREKEQ
DSALIDRLTGEFGLFISRIEQISAVWDLLSTVPIEGEEPLAKWITRRADD
KNDYIFNASPISSASHLANSLWRRAAGAVLTSATLQSLGNFNLMLRQTGL
QWLPETTTLALKSPFDFEKQGELYIPPIYASPKDPEAHTAAIIEWLPKLI
SPGEAIGTLVLFSSRKQMQDVALQLPDDYLPLLLVQGELPKAVLLQKHHR
AIEEGKASIIFGLDSFAEGLDLPGTACVQVIIAKLPFAMPDNPIEKTQNR
WIEQRGGNPFIEITVPEAGIKLIQAVGRLIRTEQDYGRVTILDNRVKTQR
YGQQLLAGLPPFKRIG
>gid:333821  dnaA  putative chromosomal replication initiator protein
MTLAEFWPLCLRRLHDMLPHGQFAQWIAPLTVGEEGGVWVVYGKNQFACN
MLKSQFAGKIEAVREELAAGRSAFVFKPGEGVCYEMAAVEGAVEPAEPSL
HAGSEEMPVQEVLLDELPSEEPVKPAASKTAADILAERMRNLPHEPRQAA
GSASRPESAAVAKARTDAQRDAEEARYEQTNLSPDYTFDTLVEGKGNRLA
AAAAQAIAESPGQSYNPFFLYGSTGLGKTHLVQAVGNELLKNRPDAKVRY
MHSDDYIRSFMKAVRNNTYDVFKQQYKQYDLLIIDDIQFIKGKDRTMEEF
FYLYNHFHNEKKQLILTCDVLPAKIEGMDDRLKSRFSWGLTLELEPPELE
MRIAILQKKAEAAGISIEDEAALFIANLIRSNVRELEGAFNRVGASSRFM
NRPVIDIDLARTALQDIIAEKHKVITADIIIDAVAKYYRIKISDVLGKKR
TRNIARPRQVAMSLTKELTTLSLPSIGDSFGGRDHTTVMHGIRAVAKLRE
EDPELAQDYEKLLILIQN
>gid:335963  dnaB  putative replicative DNA helicase
MNDYTAMPSEDREVGALSLPPHSMEAEQSVLGGLMLENPAWDRIADVVSG
EDFYRHEHRLIFRSIAKLINESRPADVITVQEDLQRNEELEAAGGFEYLI
TLAQNTPSAANIRRYAEIVRERSIMRQLAEVGTEIARSAYNPQGRDAGQL
LDEAENKVFQIAESTAKSKQGFLEMPDLLKEVVQRIDMLYSRDNPDEVTG
VSTGFIDLDKKTSGLQPGDLIIVAGRPSMGKTAFSINIAEHVAVEGKLPV
AVFSMEMGGAQLVMRMLGSVGRLDQSVLKTGRLEDEHWGRLNEAVVKLSD
APVYIDETPGLTALELRARARRLARQFNNKLGLIVIDYLQLMAGSGRSDN
RASELGEISRSLKALAKELQVPIIALSQLSRTVESRTDKRPMMSDLRESG
AIEQDADLIMFMYRDEYYNQDSPMKGLAECIIGKHRNGPVGKIFLTWTGQ
FTKFDNAAYIPEEAKIED
>gid:334210  dnaE  putative DNA polymerase III, alpha subunit
MTEPTYIPLRLHTEFSITDGMVRIKKLIAKAQEYGLPALGISDLMNEFGL
VKFYKACRSAGIKPIGAADVRIGNPDAPDKPFRAMLIIRNDAGYLRLSEL
LTAAYVGKDRNVHHAELNPEWLENGDNSGLICLSGAHYGEVGVNLLNGNE
DAARAAALKYAAWFPDAFYLELQRLPERPEWEACVSGSVKLAEELGLPVV
ATHPTQFMSRDDFNAHEARVCIAGGWVLTDKKRPRDFTPSQFFIPPETMA
ERFSDLPEALENTVEIAKRCNLHITLGKNFLPLFPTPDGLSLDDYLVKLS
NEGLQERMVQLYPDEAERAAKMPEYQERLDFELNIIIQMKFPGYFLIVQD
FINWAKTHGCPVGPGRGSGAGSLVAYSLKITDLDPLKYALLFERFLNPER
VSMPDFDVDFCQANRGRVIEYVREKYGAEAVSQIVTFGTMSSKAVIRDVG
RVLELPFTLCDKLSKLIPLEANKPLGLDDAMKAEPQIQELIEAEEADELI
TLAKKLEDLTRGLGMHAGGVLIAPGKISDYSPVYQADESASPVSMYDKGD
VEDVGLVKFDFLGLRNLTIIEMAQNNIKNTTGDIVDVGTIPLDDQTAYQI
FRDANTTAVFQFESTGMKKMLKTAHTTKFEELIAFVSLYRPGPMDNIPDF
VARMKGQEFQYIHPLLEGILAPTYGIMVYQEQVMQAAQIIGGYSLGGADL
LRRAMGKKKPEEMVKHREIFAEGAAKQGISREKSDEIFNYMEKFAGYGFN
KSHAAAYALISYQTAWLKAHYPAEFMAATMSSELDNTDQLKHFYDDCRAN
GIEFLPPDINESDYRFTPYPDMKIRYALGAIKGTGEAAVESITSARQSGG
KFTGLLDFCERVGKEHMNRRTLEALIRGGAFDSIEPNRAMLLANIDLAMN
NADQKAANANQGGLFDMMEDAIEPVRLIDAPMWSESEKLAEEKTVIGFYL
SGHPFGPYAQEVRQIAPQKLSKLKPQDSVRLAGFVTAVRTMMGKRGKIAF
VSLEDLSGQVEIMVGGQTLENCADCLKADQVLIIESKVSRDDYGGGDGLR
ILANQVMTLQTARERYARSLSLALAPHHDIGELVQLLAAHQLPDTPRIPL
QLSYANEKASGRLQVPPKWTVTPSSALFGELETLLGSRSVRVNW
>gid:338446  dnaG  DNA primase
MIPSDFIDELLAKTDIVDIIDEQVPLKKGGANYMACCPFHKEKTPSFSVS
PTKQFYHCFSCGAHGSAIGFVMEHQGLSFPEAVQFLADRVGMVVPKVHGQ
NDNPEVRAERKKKQQTLEETTAAAADFYAQQLKFNPAAKAYLDKRGLSAE
VIAHYGLGYAPDGWQPLTQVFQPYPNTALVDTGMVIDNEGRHYDRFRHRI
MFPIRNPRGQVIGFGGRVLDDSKPKYLNSPDTPLFDKGKNLYGLYEGRAA
VKEAGRILVVEGYMDVVALAQFGVGYGVAALGTATTAEHVKILMRQADSI
YFCFDGDSAGRKAAWRALENALPQLKDDKSLHFLFLPEEHDPDSYIRAYG
KAQFEDALLNQSKPLSEYFWEHLSDGIHLNTQEGKAELVKTSSPLLAQIT
APALAYLLKQRLSELVGIDPDNLAQLLGQEAPKRHVKQKNYKLPPISVKQ
PVMPTLVQRQIRSLLINPDWAAYIDLPDYLALDGDFACLANLAETIKNHP
SVPATAQVLEHMRGSPYEETINRIFRSALQSEEMEGGGEEDCENFQIGIK
KLLNELKYSQIEALKQKSLQSGLNESEKKLLLSLLTAKQN
>gid:333826  dnaN  putative DNA polymerase III, beta subunit
MLILQAERDSLLKPLQAVTGIVERRHTLPILSNVLIEGKGGQTKLLATDL
EIQIDTAGPEGGADDFRITTNAKKFQDILRALPAGALVSLDWDDSRLTLK
AGKSRFALQTLPAADFPMMNVGEDISATFSLEQERFKTMLSQVQYSMAVQ
DIRYYLNGLLMQVEGSQLRLVATDGHRLAYAACAIDADLPRAEVILPRKT
VLELFKLLNNPDDPIQIELLDKQVRFQCNGTTIVSKVIDGKFPDFNRVIP
LDNDKIFVLSRAELLGALERVSILANEKFRGARLFLQSGLLSVVCSNNEQ
EEAREEIEIAYQGGELEVGFNIGYLMDVLRNIHSDDMQLAFGDANRSTLF
TVPNNPNFKYIVMPMRI
>gid:338372  dnaQ  DNA polymerase III, epsilon chain
MTTRQIILDTETTGLYADGGDRLVEFAGLEMVNRQMTDKNLHLYVHPERD
MPEEAARVHGLTIEVLEGKNAPPFAEVGRQIADFLRGAELIIHNAKFDVG
FLNMEFRRMGLPTVEELGCTVTDTLAMAREMFPGQKASLDALCNRFSVDR
SKRVLHGALIDCELLGEVYLAMTRRQFDLMGEAEEEEPAAKPVASAEMKL
GAKLKVIKADEAELAAHGQYLDGLGEACIWRKEAVPSENGGTDA
>gid:338024  dnaZX  DNA polymerase III tau and gamma chains
MAYQVLARKWRPKTFADLVGQEHVVKALQNALDEGRLHHAYLLTGTRGVG
KTTIARILAKSLNCENAQHGEPCGVCQSCTQIDAGRYVDLLEIDAASNTG
IDNIREVLENAQYAPTAGKYKVYIIDEVHMLSKSAFNAMLKTLEEPPEHV
KFILATTDPHKVPVTVLSRCLQFVLRNMTAQQVARHLAYVLDSEKIAYDP
PALQLLGRAAAGSMRDALSLLDQAIALGSGKVAENDVRQMIGAVDKQYLY
ELLTGIINQNGAALLAKAQEMAACAVGFDNALGELAILLQQLALIQAVPN
ALSHDDPDSDILHRLAQTISGEQIQLYYQIAVHGKRDLSLAPDEYAGFMM
TLLRMLAFAPLAAASCDANAVIENTELQSPSAQTAEKETAVKKPQPRPEA
ETAQTSVQTASAAAMPSESKTAGPVSNQENNDVPPWEDAPDEAQAAAGTA
QTSAKSIQTASEAETPPENQVSKNKAADNVTDAPLSEVPSENPIQATPND
EAVETEAFAHEAPAKPFYGYGFPDNDCPPEDGAEIPPPDWEHAAPADTVG
GGADEEAEAGGIGGNNTPSAPPPEFSTENWAAIVRHFARKLGAAQMPAQH
SAWTEYHPDTGLMVLAMTAEARATADKKRLDKIRDTLAQAYGLQLTLQTQ
DWRDESGRETPAMQDKRVQAEDRQKAQALLEADPAAQKILQAFGAQWQPE
SLELAANRP
>gid:332082  dprA  DprA homolog
MTEDERFAWLQLAFTPYIGAESFLLLMRRFGSAQNALSAPAEQVAALIRH
KQALEAWRNAEKRALARQAAEAALEWEMRDGCRLMLLQDEDFPEMLTQGL
TAPPVLFLRGNVRLLHKPSAAIVGSRHATPQAMRIAKDFGKSLGGQNIPV
VSGMASGIDTAAHQGALEAEGGTIAVWGTGIDRIYPPSNKNLAYEIAEKG
LIVSEFPIGTRPYAGNFPRRNRLIAALSQVTLVVEAALESGSLITAGLAA
EMGREVMAVPGSIDNPHSKGCHKLIKDGAKLVECLDDILNECPGLLQNTG
ASSYSINKDTPDTGRRAVQTAYAPPPAAKMPSEAAAGGTAVGGILDKMGF
DPIHPDVLAGQLAMPAADLYAALLELELDGSVAAMPSGRYQRIRT
>gid:337842  fis  factor-for-inversion-stimulation protein
MPHTLPDISQCIRQNLEQYFKDLNGTEPCGVYDMVLHQVEKPLLVCVMEQ
CGGNQSKASVMLGLNRNTLRKKLIQHGLL
>gid:337327  fpg  formamidopyrimidine-DNA glycosylase
MPELPEVETTLRGIAPHIEGKTVEAVVLRQLKLRWQINPDLGEILSGRQV
LSCGRRAKYLIVRFQTGILLIHLGMSGSLRIFTPSDGRIGRSDRHDHVDI
VFSDGTVMRYRDPRKFGAILWYEGIEEHHPLLEKLGPEPLSEAFCTDYLY
VRLKAQKRAVKLALMDNAVVVGVGNIYANESLFRAGISPHRPANRLKKKE
CALLVETVKAVLRRAIETGGSTLRDFVDSDGKSGYFQQEYTVYGRHNQPC
PQCGGLVVKETLGQRGTFYCPNCQK
>gid:337254  gcr  site-specific recombinase
MADMKKITPQNLRPLLSESLGHTDFVNVLNALIKFLRRGGKKCAGERFDL
IIDTFKQDRELLSRFSRCFYIWLAQIHIYPALIKLGIFSRHSFAREMGIR
IYERFSPSYKDFANLGEVFLYLFHSENDDKWLQTLNIRQWLVLYELIRSH
AEPSKLQTAGIRLADARLRAIEMLSVWTASEAIEPDLIRIAPRLLEADSS
FVALQRETAKLVEHYRNGTTPYDTAHLEVMFDQCFSQIDYLRRKGTGAGS
GSSVKVAHLLERLRQTVDRLKLLTDIQTGAGNSNRLTIALMNSLIYAAVE
QYSTRHLRRSSIRMLARSITENKSHHGEHYITRNRKEYFKMFYSAAGGGI
IIALMALLKIRIGTLGLSPFLTSLSAGFNYGIGFMIIHMLHCTVATKQPA
MTAASFAEQVDLNEGGKAVDNKLAKLLIDVCRSQSVAVFGNVSIAILLAC
AISFGYAHLHQQPILDVHTAAYQFKSIDIIAYPTLWYAAIAGLWLFCSGI
IAGFFDNRADYLNLRQRLPFNPLLRKIMRPGPRRVLAAYIHKHYGSLAGN
FIFGMLLGMTGYFGHLLGLPLDIRHVAFSSANLGYAAVSGNVGLGTFVLG
IFSVLAIGLVNLCVSFSLALFVALRSRGTKIGSIRNLIKSFWNQIKSNPC
ILFLPPAKEQGHPPSDKP
>gid:337718  gyrA  DNA gyrase subunit A
MTDATIRHDHKFALETLPVSLEDEMRKSYLDYAMSVIVGRALPDVRDGLK
PVHRRVLYAMHELKNNWNAAYKKSARIVGDVIGKYHPHGDTAVYDTIVRM
AQNFAMRYVLIDGQGNFGSVDGLAAAAMRYTEIRMAKISHEMLADIEEET
VNFGPNYDGSEHEPLVLPTRFPTLLVNGSSGIAVGMATNIPPHNLSDTVN
ACLRLLDAPDTEIDELIDIIQAPDFPTGATIYGLSGVREGYKTGRGRVIM
RGKTHIEPIGKNGEREAIVIDEIPYQVNKAKLVEKIGDLVREKTLEGISE
LRDESDKSGMRVVIELKRNENAEVVLNQLYKLTPLQDSFGINMVVLVDGQ
PRLLNLKQILSEFLRHRREVVTRRTLFRLKKARHEGHIAEGKAVALSNID
EIIKLIKESPNAAEAKDKLLAHPWRSSLVEEMLTRSGLDLEMMRPEGLAA
NIGLKEQGYYLSEIQADAILRMSLRNLTGLDQEEIVESYKNLMGKIIDFV
DILSKPERITQIIRDELEEIKTNYGDERRSEINPFGGDIADEDLIPQREM
VVTLTHGGYIKTQPTTDYQAQRRGGRGKQAAATKDEDFIETLFVANTHDY
LMCFTNLGKCHWIKVYKLPEGGRNSRGRPINNVIQLEEGEKVSAILAVRE
FPEDQYVFFATAQGLVKKVQLSAFKNVRAQGIKAIALKEGDYLVGAAQTG
GADDIMLFSNLGKAIRFNEYWEKSGNDEAEDADIETEISDGIEDETADSE
NALPSGKHGVRPSGRGSGGLRGMRLPADGKIVSLITFAPETEESGLQVLT
ATANGYGKRTPIADYSRKNKGGQGNIAINTGERNGDLVAATLVGETDDLM
LITSGGVLIRTKVEQIRETGRAAAGVKLINLDEGETLVSLERVAEDESEL
SDASVISNVTEPEVEN
>gid:331606  gyrB  DNA gyrase subunit B
MTEQKHEEYGADSIQVLEGLEAVRKRPGMYIGDTQDGSGLHHMVFEVLDN
AIDEALAGHCDKITVTIHADHSVSVADNGRGMPTGIHPKEGRSAAEVIMT
VLHAGGKFDNNSYKISGGLHGVGVSVVNALSDWVTLTIYRDGKEHFVRFV
RGETEEPLKVVGDSDKKGTTVRFLASTETFGNVEYSFDILAKRIRELSFL
NNGVDIELTDERDGKHESFALSGGVAGFVQYMNRKKTPLHEKIFYAFGEK
DGMSVECAMQWNDSYQESVQCFTNNIPQRDGGTHLTALRQVMTRTINSYI
EANEVAKKAKVETAGDDMREGLTCVLSVKLPDPKFSSQTKDKLVSGEIGP
VVNEVISQALTDFLEENPAEAKIITGKIVDAARAREAARKAREITRRKGV
MDGLGLPGKLADCQEKDPALSELYLVEGDSAGGSAMQGRDRKFQAILPLK
GKILNVEKARFEKMLASQEVAALITALGAGIGKEEFNAEKLRYHRIIIMT
DADVDGAHIRTLLLTFFYRQMPELVERGYIYIAQPPLYKAKYGKQERYLK
DELEKDQWLLGLALEKAKIISDGRTIEGAELADTAKQFLLAKTVIEQESR
FVDELVLRAMLHASPIDLTSSENADKAVAELSGLLDEKEVALERIEGHEG
HRFIKITRKLHGNVMVSYIEPKFLNSKAYQTLTQTAAALKGMVGEGAKLY
KGENGYDADSFETALDILMSVAQKGMSIQRYKGLGEMNPEQLWETTMDPA
VRRLLKVRIEDAIAADEVFVTLMGDEVEPRRAFIENNALIAQNIDA
>gid:335377  himA  putative integration host factor alpha-subunit
MTLTKAELADILVDKVSNVTKNDAKEIVELFFEEIRSTLASGEEIKISGF
GNFQLRDKPQRPGRNPKTGEEVPITARRVVTFHASQKLKSMVEHYYDKQR
>gid:337361  hip  integration host factor beta-subunit
MTKSELMVRLAEVFAAKNGTHLLAKDVEYSVKVLVDTMTRSLARGQRIEI
RGFGSFDLNHRPARIGRNPKTGERVEVPEKHVPHFKPGKELRERVDLALK
ENAN
>gid:335300  holA  putative DNA polymerase III, delta subunit
MAAHIGRIDTDAPLKPLYVIHGEEELLRIEALDALRAAAKKQGYLNREVY
TADNAFDWNELLQTAGSAGLFADLKLLELHIPNGKPGKTGGEALQDFAAR
LPEDTVTLVLLPKLEKTQLQSKWFAALAAKGEVWEAKPVGAAALPQWIRG
RLDKIGLGIEADALALFAERVEGNLLAARQEIDKLGLLYPKGHTVNIDEA
QTAVANVARFDAFQLAGAWMKGDVLRVCRLLDGLREEGEEPVLLLWAVAE
DVRTLIRLAAALKQGQSIQSVRNSLRLWGDKQTLAPLAVKRISVVRLLDA
LKTCAQIDRIIKGAEEGDAWTVFKRLVVSLAE
>gid:335535  holB  putative DNA polymerase III, delta' subunit
MIYPWHQEQWRQIAEHWTSRPNAWLFVGKKGTGKTAFARFAAKALLCEKP
VTGNVPCGECASCHLFEQGSHPDFYEITPLTDERENGRKLLQIKIDAVRE
IIDNVYLTSVRGGLRVILIHPAESMNVQAANSLLKVLEEPPPQVVFLLVS
HAADKVLPTIKSRCRKMVLPAPSHEEASAYLRERGVAEPEEFLAFHSGAP
LFQEEDGLRELRAKLLDILAEPRLLKILDYAALFDKEKLPLAVFVGWMQK
WLVDLGLCLQHMKPVYYPAYEDRLLQTASGFRPRNVFAAEDMLKQLAPYG
VHTLNVKMQIEHLLINYLEWKKENG
>gid:338630  holC  DNA polymerase III chi subunit
MPKATFYTHVAQVPIFTCRLIARAIRDGGRILVWSDSFGQLQELDKMLWQ
YEAESFIPHEIWETEEAMPSEPSVLLACGGNLPRIPEGMAVLNLSDGFWN
TAPVLPARVLEIVGNSLEELADARERFTAYRRSGFAIEHHGMEGKA
>gid:333244  hrpA'  ATP-dependent DNA helicase
MSPNFAQTLSKDRHFLQSAFKNPNKYGGLSKVEEKYRKSHEIFLKRLAAL
PKPEFDNTLPVHEKLDEIKKAIAEHQVTIICGETGSGKTTQLPKICLELG
RGAAGLIGHTQPRRLAARSVAERIAEELKSEIGSAVGYKVRFTDHTSRDA
CVKLMTDGILLAETQTDRYLAAYDTIIIDEAHERSLNIDFLLGYLKQLLP
RRPDLKVIITSATIDAERFSQHFNGAPVLEVSGRTYPVEILYRPLTGKDE
DDAEVELTDAIVDAADELARHGEGDILVFLPGEREIRETAEALRKSTLRR
NDEILPLFARLSHAEQHKIFHPSGAKRRIVLATNVAETSLTVPGIKYVID
TGLARVKRYSARAKVEQLHVEKISQAAARQRSGRCGRVSAGVCIRLFSEE
DFNSRPEFTDPEIVRSNLAAVILRMASLNLGDVAAFPFLEMPDSRYINDG
FQVLLELGAVEAV
>gid:336949  hupB  putative DNA-binding protein
MNKSELIEAIAQEADISKAAAQKALDATTNAVTTALKQGDTVTLVGFGTF
YVGERAERQGRNPKTGEPLTIAAAKTPKFRAGKALKDAL
>gid:339020  hupB2  DNA-binding protein HU-beta
MNKSELIQAIADEAELSKRAAAEFVNAFVSVVTQELKDGNDVTLVGFGTF
HAAQSAERQGRNPKTGEPLTIAARKTPKFRSGKALKDAVNG
>gid:335061  ligA  putative DNA ligase
MNPNSKHNTNFTNLLKPSDSDIKQFAAQHIRHLTDLLNRYAYEYYTLDAP
SVPDAEYDKLFRELEALERNHPELKLPDSPTQRVGGEPLAGFAEVRHEVP
MLSLTNAFSPQDENGVFDHAEMYAFDQRVRDGLDGGKPEYVIEPKFDGLA
ISLLYRDGVLVQAATRGDGTTGEDVTQNVKTVANIPLRLHGENTPELIEV
RGEVLMLKADFAALNKRQAENGQKPFANPRNAAAGSLRQLDSRITAQRKL
HFFPYSVARQQGGFVAEEHIQELAYFQALGFSLPNGNFGCFKNIDEVLTF
YEQMQQKRPELPYEIDGMVVKVNSLAQQRELGFISRAPRWAVAHKFPAEE
ALTIVEAIDVQIGRTGAVTPVARLQPVFVGGVTVTNATLHNQDEVSRKDV
RVGDTVVVRRAGDVIPEVVRVIFERRPMRETAVAVSDGIGHRQDDLFAET
PSANQTQSVPLHKPYRLPTHCPICRSEIEREEGEAVARCSGGMLCQAQRA
QGLIHFASRKAMDIDGLGEKQIEQLVAQDLVLHFADLYRLDIPTLQKMKE
TADKTVAESDQMPSEGSSVGASGKHKKQPVKWAENILAGIESGKTPELAR
FLFALGIRHVGERTAKTLAQAFGTLERVRRAPEPVLACLPDIGTVVARSI
AHFFAQAEQQAMIDELLAAGVAPQTQAVTIPPARHAEPQRWIARLPDFKI
SENKAQALWELAGKNIEGLQNDKALPADWQAWRSEPQNAALLENLKTFFA
QMPSEDEAAQGSDGINKAVAGKTFVLTGTLPTLKRDQAQSLIEAAGGKVS
GSVSKKTDYVVAGEAAGSKLEKANALGVSILSEAELLTLLG
>gid:337276  mfd  transcription-repair coupling factor
MTYPIPKPREKSRWLNLSQGSLPLALARYLPHKQLKVVLTQDAEQALRLQ
TAWRFFRPHDTAVFLPDWETLPYERFSPHQDLVSERLSALWQIKSGAADV
LFVPVATAMQKLPPVPFLAGRTFWLKTGQTLDIGRLKSDLVDAGYNHVSH
VVAAGEFAVRGGIVDLFPMGSEMPYRIDLFDDEIDSIKTFDTETQRTISP
VSEIRLLPAHEFPTDSEAQKIFRSRFREEVDGNPNDAAVYKAVSNGHFGA
GVEYYLPLFFENELETLFDYIGEDALFVSLGDVHAEANRFWSDVKSRYAM
AQGDETYPPLLPQHLYLSADVFAGRLKNYGQVLPDVSGKEHTLPDLAVNR
QSDEPLQALKDFQTAFDGRILLCAESLGRRETMLGFLQQNGLKAKPVSDW
QGFLSAHEPLMITVAPLAYGFKLGGLQSPNQQQTTSASEGEGDAVTDQTE
FSAAAISPLPSPLPQEREQSAAAVSDGLKTESSLYSIANNLHGQIRQQPT
PSPVGEDWGESKTVAAQTEFPASATNPLPSPLPQEREQSAAAVSDDLKTK
SSLYPIENSLHGQIRQQPAPSPVGEGWGEGKAVADQSAIAVITESDLYQY
VARSRVHNRRKKHAAVSDGLLRDLAEINIGDPVVHEEHGIGRYMGLVTID
LGGETNEMMLLEYAGEAQLYVPVSQLHLISRYSGQAHENIALHKLGSGAW
NKAKRKAAEKARDTAAELLNLYARRAAQSGHKFEINELDYQAFADGFGYE
ETEDQAAAIAAVIKDLTQAKPMDRLVCGDVGFGKTEVALRAAFVAVMGGK
QVAVLAPTTLLVEQHAQNFADRFADFPVKVASLSRFNNSKATKAALEGMA
DGTVDIVIGTHKLVQDDIKFKNVGLVIIDEEHRFGVRQKEQLKRLRANVD
ILTMTATPIPRTLSMALEGLRDFSLITTAPSRRLAVKTFVKPFSEGSVRE
AVLRELKRGGQVFFLHNEVDTIENMRERLETLLPEARIGVAHGQLREREL
EQVMRDFLQQRFNVLLCSTIIETGIDIPNANTIIINRADKFGLAQLHQLR
GRVGRSHHQAYAYLLTPEYITKDAEKRLDAIAAADELGAGFTLAMQDLEI
RGAGEILGEGQSGEMIQVGFTLYTEMLKQAVRDLKKGHQPDLDAPLGITT
EIKLHSPALLPESYCPDIHERLVLYKRLAVCETVQQINAIHEELVDRFGL
PEQPVKTLIESHHLRLMAKELGINAIDAAGEAVTVTFGKNNNIDPTEIIL
LIQNDKKYRLAGADKLRFTAEMENIEVRINTVKNVLKTLQNRCLPK
>gid:338017  mutL  DNA mismatch repair protein
MPRIAALPDHLVNQIAAGEVVERPANALKEIVENSIDAGATAIDVELDGG
GIRLIRVSDNGSGIHPDDIELALHRHATSKIKTLNDLEHVASMGFRGEGL
ASIASVSRLTLTSRQEDSSHATQVKAEDGKLSSPTAAAHPVGTTIEAAEL
FFNTPARRKFLKSENTEYAHCATMIERLALAHPHIAFSLKRDGKQVFKLP
AQSLHERIAAIVGDDFQTASLEIDSGSGALRLYGAIAKPTFAKGKTDKQY
CFVNHRFVRDKVMLHAVKQAYRDVLHNALTPAFVLFLDLPPEAVDVNVHP
TKTEIRFRDSRQVHQLVFHTLNKALADTRADLTESVSNAGEVLHDITGVT
PAPMPSENDSENLFNRASDYPTGNKPDTRNAFGSSGKTAPMPYQSAYAPQ
QRSLSLRESRAAMNTYAELYKKTDDIDLELSQFEQARFGNMPSETPAPKT
DTPLSDGIPSQSELPPLGFAIAQLLGIYILAQAEDSLLLIDMHAAAERVN
YEKMKRQRQENGRLQSQRLLIPITFAASHEECAALADYAETLAGFGLELS
DMGGNTLAVRAVPTMLGKADVVSLARDVLGELAQVGSSQTIEEHENHILA
TMSCHGSVRAGRQLTLPEMNALLRDMENTPRSNQCNHGRPTWVKLTLKEL
DALFLRGQ
>gid:332423  mutS  DNA mismatch repair protein
MSKSAVSPMMQQYLGIKAQHTDKLVFYRMGDFYEMFFDDAVEAAKLLDIT
LTTRGQVDGEPVKMAGVPFHAAEQYLARLVKLGKSVAICEQVGEVGAGKG
PVERKVVRIVTPGTLTDSALLEDKETNRIVAVSPDKKYIGLAWASLQSGE
FKTKLTTVDKLDDELARLQAAEILLPDSKNAPQLQTASGVTRLNAWQFAA
DAGEKLLTEYFGCQDLRGFGLDGKEHAVAIGAAGALLNYIRLTQNLMPQH
LDGLSLETDSQYIGMDAATRRNLEITQTLSGKKSPTLMSTLDLCATHMGS
RLLALWLHHPLRNRAHIRARQEAVAALESQYKPLQCRLKNIADIERIAAR
IAVGNARPRDLASLRDSLFELAQIDLSANGSSLLETLKAVFPENLSTAEQ
LRQAILPEPSVWLKDGNVINHGFHPELDELRRIQNHGDEFLLDLEAKERE
RTGLSTLKVEFNRVHGFYIELSKTQAEQAPADYQRRQTLKNAERFITPEL
KAFEDKVLTAQEQALALEKQLFDGVLKNLQTALPQLQKAAKAAAALDVLS
TFSALAKERNFVRPEFADYPAIHIENGRHPVVEQQVRHFTANHTNLDHKH
RLMLLTGPNMGGKSTYMRQVALIVLLAHTGCFVPADAATIGPIDQIFTRI
GASDDLASNRSTFMVEMSETAYILHHATEQSLVLMDEVGRGTSTFDGLAL
AHAVAEHLLQKNKSFSLFATHYFELTYLPEAHAAAVNMHLSALEQGQDIV
FLHQIQPGPAGKSYGIAVAKLAGLPVRALKSAQKHLNGLENQAAANRPQL
DIFSTMPSEKGDEPNVGNFVDKAEEKHFEGILAAALEKLDPDSLTPREAL
SELYRLKDLCKSVS
>gid:337788  mutY  adenine glycosylase
MILMNTPIPFSERLIRWQKQHGRHHLPWQVKNPYCVWLSEIMLQQTQVAT
VLDYYPRFLEKFPTVQTLAAAPQDEVLSLWAGLGYYSRARNLHKAAQQVV
EQFGGTFPSERKDLETLCGVGRSTAAAICAFSFNRRETILDGNVKRVLCR
VFARDGNPQDKKFENSLWTLAESLLPSENADMPAYTQGLMDLGATVCKRT
KPLCHQCPMADICEAKKQNRTAELPRKKTAAEVPTLPLYWLIVRNRDGAI
LLEKRPAKGIWGGLYCVPCFESLNGLSDFAAKFSLTMADMDEQTALTHRL
THRLLLITPFEAQMPSESPSDGIWIKPAHLKDYGLPKPLEIYLNGNRLE
>gid:335734  nmgII  putative modification methylase
MTISTMAQTHDTRLQKTLLFPSQQGWKSKTFLKPDSHIRLATVFSGIGAV
EQAFHRLNLNHTIVFAGDIDPYVKKSYLGNYKLNEDFWHNDITQFDASKF
RNQVDILVGGSPCQAFSMVGKRAGLEDTRGTLFYEFARVVDEVQPKIFIY
ENVKGLLNHDNGKTWKVVKSVFYSLGYDLYFQIMNSKDYGIPQHRERIFV
VGFHTPPINGFQFPEKIELEHTMQDFLEDYTDSKYFLREKGAKFVTSSKN
RQKRYTQINGEIALCQKANQQFNWHGDFIFQAARESEFDDFIFDVNNVEE
KYYLSEKIKNYVLAGGTKNFKTSTETDLPVARPLLQTMHKMHRAGVDNYV
THNRGRIRKLTPRECLRLMGFRDDFKILVSDTQMYRQAGNSIVVDVLIAI
LKQMDITLYGE
>gid:334523  nth  putative endonuclease III
MNRHIRQEIFERFRAANPHPTTELNFNSPFELLIAVLLSAQATDVGVNKA
TAKLFPVADTPQAMLDLGLDGVMEYTKTIGLYKTKSKHIMQTCRILLEKY
KGEVPEDREALESLPGVGRKTANVVLNTAFGHPVMAVDTHIFRVSNRTKI
APGKDVREVEDKLMRFIPKEFLMDAHHWLILHGRYTCKALKPQCQTCIIN
DLCEYPAKA
>gid:335024  ntpA  putative nucleoside triphosphate pyrophosphohydrolase
MPMAKPLKYPVSALVVLYSGDGGILLIERTHPKGFWQSVTGSLEPGETVA
QTARREVWEETGILLADGQLQDWHDSTVYEIYHHWRHRYPKGVFENREHL
FSAEIPRDTPIVLQPEEHVSYGWFDMEEAAEKVFSSSNRCAILELGRFLG
KR
>gid:338799  parC  DNA topoisomerase IV subunit A
MQPHAPHTDSNTLMLGRYAERAYLEYAMSVVKGRALPEVSDGQKPVQRRI
LFAMRDMGLTAGAKPVKSARVVGEILGKYHPHGDSSAYEAMVRMAQDFTL
RYPLIDGIGNFGSRDGDGAAAMRYTEARLTPIAELLLSEINQGTVDFVPN
YDGAFDEPLHLPARLPMVLLNGASGIAVGMATEIPSHNLNEVTQAAIALL
KKPTLETADLMQYIPAPDFAGGGQIITPADELRRIYETGKGSVRVRARYE
IEKLARGQWRVIVTELPPNANSAKILAEIEEQTNPKPKAGKKQLNQDQLN
TKKLMLDLIDRVRDESDGEHPVRLVFEPKSSRIDTDTFINTLMAQTSLEG
NVSMNLVMMGLDNRPAQKNLKTILQEWLDFRTVTVTRRLKFRLNQVEKRL
HILEGRLKVFLHIDEVIKVIRESDDPKTDLMAAFGLTEIQAEDILEIRLR
QLARLEGFKLEKELNELREEQGRLNILLGDENEKRKLIVKEMQADMKQFG
DARRTLVEEAGRAVLTQTTADEPITLILSEKGWIRSRAGHNLDLSQTAFK
EGDRLKQTLEGRTILPVVILDSSGRTYTLDAAEIPGGRGDGVPVSSLIEL
QNGAKPVAMLTGLPEQHYLLSSSGGYGFIAKLGDMVGRVKAGKVVMTADS
GETVLPPVAVYASSFINPDCKIIAATNQNRALAFPIGELKIMAKGKGLQI
IGLNAGESMTHTAVSSEPEILIESEGRRGAAHKDRIPISLLEAKRGKKGK
LLPISGSLKQLSSPK
>gid:339320  parE  topoisomerase IV subunit B
MAKNNQYSESSITVLKGLEPVKERPGMYTRTDSPTHICQEVIDNAADEAL
GGFATAIDVQIHEDGSLSVRDNGRGIPVGLHPEEGVPVVELVFTRLHAGG
KFNKKDGGSAYAFSGGLHGVGVSVTNALSTRLEVTVKREGKIHRIVFAGG
DVVEPLAQVGKCAVKDSGTEVRVWPDGKYFESPNYSIPELERLLRAKAVL
LPGVRVSLTRPVKGEDEAHTQTWHYPDGLKSYLTDLIADAQEAVPLFSCE
NYISDEHNGDFSIGEGAAFALTWLEEGSCANESYVNLIPTPLGGTHEAGL
KQAVFNAVSNFINLHNLLPRGVKVQSDDVFGKTAFVLSARVLDPQFQGQT
KDKLTNRDALKLVATVSGDPLELWLNQNVDFGKKIAELAIRQAQARMRSV
KKIEKKKGSGVAVLPGKLTDCESEDIRENELFLVEGDSAGGSAKLARDKA
TQAILPLRGKVLNSFEVHPDQLFGNAEIHDISVAIGVDPHGINDHPDLSG
LRYGKIAILSDADVDGSHIQVLLLTLFYRHFPKLVADGHIYVAQPPLFRV
DVNAQGKSKPARKFYALDQNELDGILERLQKEGVKETAYSISRFKGLGEM
NPDQLKDTTMHPDTRRLLQVQIPEGADDETRDIFFKLMGKGEAAARRAWM
EREGDTAELDI
>gid:340450  phr  deoxyribodopyrimidine photolyase
MPSETARPLYADTCAAHTLVWFRQNLRIRDNAALCAAVAEGLPVIGIWID
DAETDNPRRAAFYRQSAAELAQGLAGRGIPLYTAASPAELVRLAVRLNIR
AVIADESHTFADKLADNALWHELNKHGIALTFVNDRAVFGKTDLIPDGGT
AHTDFDRYREVWLDRFSKQPPAGPDLFAAYRQPFPENLSAPPPAALSDGI
FLPQNSGETAAWRQWRRFLEQADSYSVLKDFPSRKHTSLMGAYLSAGCIS
PRLLARESLERRLNAWADNIIRRDFFLQLALQHTDDDPSDGNPEHTLRLT
LWQQGRTGIPIIDAAMRCLHKTGSLHPALRRLSADFFCHVLNLPRREGEI
WFARQLTDFDAAINQGNWRLAASRHTCPDIAAAAHKTDPDGTFVRRHIPE
LAHLSADTVHTPWRFACSVDTHGYPAHPVAGIP
>gid:333385  polA  DNA polymerase I
MSNRPTLLLVDGSSYLYRAYHAMGQNLTAPDGAPTGALYGVLNMLRRLRS
EYPHDYCAVVFDAKGKNFRHQMFEEYKATRPPMPDDLRPQAEALPDLVRL
TGWPVLVIGQVEADDVIGTLAKQGAEHGLRVIVSTGDKDMAQLVDERVTL
VNTMSSETLDIEGVKAKFGVRPDQIRDYLALMGDKVDNVPGVEKCGPKTA
VKWLEAYGSLQGVIEHASEIKGKVGENLQAALPQLPLSYDLVTIKTDVDL
HAELSDGIESLRCTTPKWAQLVVDFKRWGFRTWLKEAESNMNTGSTDDLF
GSDSIGEQAALNAEMPFEKQAEKATAPEKLDYQAVTTEAQFAALLDKLSR
ADTIGIDTETTSLDAMNASLVGISIAFQAGEAVYIPVGHSLTAAPEQLDL
QDVLGRLKPHLENPALKKIGQNLKYDQHVFANYGIALNGIAGDAMLASYI
IESHLGHGLDELSERWLGLETITYESLCGKGAKQISFADVAIGQATEYAA
QDADFALRLEAHLRAQMDAKQLEMYEKMELPVAQVLFEMERNGVQIDRAE
LARQSAELGAELMKLEQEAYAAAGQPFNLNSPKQLQEILFDKMGIPTKGL
KKTAKGGISTNEAVLEQLAPDYPLPKIILQNRSLAKLKSTYTDKLPEMIS
PKDGRVHTTYAQAVAITGRLASNNPNLQNIPIRTAEGRRVRRAFTAPQGS
VIVSADYSQIELRIMAHLSGDKTLIAAFQNGEDVHRRTAAEVFGIAPENV
SSEQRRYAKTINFGLIYGMGQYGLAKSLGIDNISAKNFIDRYFARYPGVA
EYMQRTKEQAAAQGFVETLFGRRLYLPDIRNKNTNARAGAERAAINAPMQ
GTASDLIKRAMIDVSRWLSECEASPWDELLQSKLIMQVHDELVLEVVETE
LDFVKEKLPQIMAKVDGGLLDVPLVAEVGVGENWEEAH
>gid:334602  priA  putative primosomal protein N'
MIYHRIAVNVPLSDGLLTYSHSEPLPPGTRVLVPFRNKTVVGMVWETDIA
PDMDTARILSVRTAFSDEPLLPESWRDLLAFTSRYYHYPTGQAVFAALPQ
GLKETRAVEMPQPPLFYALNEAGRAQTPPPARFNKKAALWDALLSGEMTM
AALKQVNAQAVKLIENWAEQGWIETTEAAKPVLRSCHGQASHSEFVLNAD
QRQASDAIQTALGRFRPFLLYGITGSGKTEVYFDAMAKVLAQGRQVLFLL
PEINLTPQLLKRVENRFADVPTAVLHSQMAAGKRTQDYLRAMLGQAKLVI
GTRLAVFTPMDDVGLIVVDEEHDGSFKQDNELRYHARDLAVWRAKQSGCP
VVLGSATPSLESWHKAQSGAYRLLQLTERAHTAAQLPQVDILNVGRLKLD
NGFSPQALQLLKQNFEAGGMSLVYLNRRGFAPALFCGDCGHTFGCPNCSA
KMVLHQRARQLRCHHCDHREPIPYKCPDCGNQDLTAVGHGTQRVEETLRA
FLPKAAVVRVDRDSTAHKNDWADLYRRIADNEIDILVGTQMLAKGHDFAR
LNLVIVLNADGSLYSADFRASERLFAELMQVSGRAGRADKPGKVLIQTQL
PEHPVFAAVKAQDYAVFAENELNERQMFAMPPFGFQIAVRADALRVADAM
EFLNAAKETLAPLLPASVSQFGAAPMLMVRLAERERAQVFLESTSRQDLH
RAVSLWVQVLQQNRDGKIRWSVDVDPQET
>gid:337427  priB  primosomal replication protein
MGFNNLVSLAVLIEKVFPIRYTPAGIPVLDIILKHESWQEENGQQCLVQL
EIPARILGRQAEEWQYRQGVYVHVEGFLAQKSRRSLMPMLRIQNIQEYKG
>gid:337130  radC  putative DNA repair protein
MSIKQWPEGERPREKLLERGAAALSDAELLAILLRVGTRGMSAVDLARYL
LQEFGSLGRLMSAEVGKLSAYKGMGTASFTQFAVVREIGRRILAEELQES
IVLSDPDTVADYLRFHLGQEKVEVSVALLLNRQNQLIAVRELSRGTVAEN
TIYIREIVKLALDEYADSLIIAHNHPGGSPEPSQEDIMFTRRLAQAMSLV
DVSLLDHFIVTAQTVRSFRQLGLMP
>gid:335814  rdgC  RdgC protein
MWFKQISFYPLNKEKLPEADVLADKLAEAEFTHCQGLDWFSEGFTAPVSF
SPELVFPADFTLRVALKKEEKVLPAGVIRDILEEKVAEIQNNEARNVGRK
EKQELKEQITDDLLPRAFTRSSRTEAVFNTRHGYLLVNNAASAKAENILT
KLREALGGLEASLPNTKQSPSSLMTGWLLQGHCEGGFELDSDCELKGTGD
IVPVVKVSKQDLTADEVVQHVKNGKTVTQLGLVWREQIAFILTQDFTLKR
IQYLDVLQEEAESNGDDAAGLAFASQILMAESVSIMLEELVSYLGGWQD
>gid:338056  recA  RecA protein
MSDDKSKALAAALAQIEKSFGKGAIMKMDGSQQEENLEVISTGSLGLDLA
LGVGGLPRGRIVEIFGPESSGKTTLCLEAVAQCQKNGGVCAFVDAEHAFD
PVYARKLGVKVEELYLSQPDTGEQALEICDTLVRSGGIDMVVVDSVAALV
PKAEIEGDMGDSHVGLQARLMSQALRKLTGHIKKTNTLVVFINQIRMKIG
VMFGSPETTTGGNALKFYSSVRLDIRRTGSIKKGEEVLGNETRVKVIKNK
VAPPFRQAEFDILYGEGISWEGELIDIGVKNDIINKSGAWYSYNGAKIGQ
GKDNVRVWLKENPEVADEIDAKIRALNGVEMHITEGTQDETDGERPEE
>gid:335590  recB  putative exodeoxyribonuclease V beta chain
MSASIQAFDPLTVPISGTNLIEASAGTGKTYGIAALFTRLIVLEQKNVER
VLVVTFTKAATAELKTRLRGRLDDVLQVLESKGIAKLGDDTLSDGIAAYC
AEHHEGDTFLPELLKQALQKEGRTRLIVRLKAAIGQFDNAAIYTIHGFCQ
RILRDYAFLCQAPFDVEMTEEDGDRLLIPAQDFWRERVSNDPVLAALALK
RKAVPQTVLAQISRYLSRPYLNFRRPQADLKQAQRNAETSWQTICRLLPE
LEAGFWRIHPDLNGNSYRKNSFGNLFKELAQKSAAGQLPFLDKDTHDRLL
KLASDKLEAGLKKGKTPDAAVFAELQKLADFGRDLNALEEAEEATMIRLQ
LDLIEYLNRSLAEMKKSRRERGFDDLLLDVHTALTDNPHADTLARAVAEN
WETALIDEFQDTDPLQYEIFQKIFIAQNRPLFLVGDPKQAIYSFRGADIY
AYLQAAEDARHRYTLATNYRSHAALIGSIGALFRLKERPFVLENIGYSEV
GAARAESRLSPERPAVQVRWLHENDNEKANKDVLRRRAADYCADEIAHAL
NEAARGRLNFKGCPLQSGDIAVLVRTHNEAVMVSAALKKRQVQSVLLSRE
SVFASPEAAALSALIGFWLEPRRAGTLRFVLTSSIFGYNAQQLHDFNQNE
SEILHWAESARTALDNWNQYGIFAAMQQFSQTHGIETRLLSRNNGRSLTN
YFQLLELLAAEDAQNRNPAALHKWLRDQISLAGNNSGDNRAIRLESDEDL
VKIVTMHASKGLQYPLVYCPFAWDAQDTGPSDWQILHQSANRTELLAKAQ
LSEDEQKQYADEEMAERLRLLYVALTRAEEQLNIYAAYSSDTADNPLAYL
IEGLPQDSRETVRQTYAQEKDGITMLKQNWRRVADNAPAGTDFAFTENAP
PPAAYRSNAGQTAEFAANSIPERRFRFVRHTSFTALSRHTQTPDGGEEDA
CPSLDAAETSVAAMPSETPTASDGISIHDFPKGTQAGLCLHEILEDFKFG
QAAAGQETLIADKLKKYGFEEMWLPAVAEMAEACQKTPLTGAYCLSDIPP
ECRCPEMGFTLHTEDFGLKRLRDWFARDDIRLPEVCRAAAETLDFHTVNG
FLNGFIDMVCQDPEGNICVIDYKSNHLGADASAYTRQAMDEAVAHHHYYL
QALIYAVASARYFKLRGQPPAAVSVRYLFLRGIDGKGGGVWHWDIDAAAL
EQIK
>gid:339467  recC  exodeoxyribonuclease V
MFYLYQSNRLETLAALFARIQKVKPLKSALQPEQIIVQSQGMRRYLNTCL
ARDLGVAANLSFSLPAGLTWKLMKKLIPGIPELSPFAPEVMRWRLLDLFR
SEAFRNTAEFEDVRNVLQDYLGSGESADYQLAGQLADIFDQYLVYRPQWI
DAWQQGRRLGLGDDEIWQSKLWRYLDDGRQSAPHRVALWEKLLAALDKDK
LPERYFVFGISTMAPMYLQLLHKLSEHCDVFVFALNPSGMYWGNVIEAAQ
ILKGGGDPDLTQAGHPLLASLGKQGRDFFDFLNEMEIEGETPVFEEGGRD
TLLHALQTDIQNLKMPSENVGSVGTDDGSIRIVSAHSPLRELQILKDKLL
KILHEHPDWQPHDIAVLTPNIESYTPFIEAVFGQAQPGAQALPYSVSDVK
ISRRQPLFHALSCLFDLLESRFEVDKVLVLLETAPVLRHFGLTEDDLPLL
HDMVADLNVRWGLDGEMRGGTDQLFTWKQAVERMILGWMLPEGGNPMWQG
VSAWYADVNQTALFGRFAAFLETLTDIVRIWRQPATVDEWVARCRDLLET
LFQVEGDDQKAVQSLENEWVKWQAETELAQFSGQLPLHTVIRHIRRFLDS
ESEAGFLRGGITFCSMVPMRSLPFKVICLLGLNDGDFPRNTKAAVFDLIA
KHPAKGDRARRDDDRYLFLEALISAREILYLSYIGRDIRKDEELAPSSLL
GELIDTVAAMTGTNSRQLAQNWIEQHPLQAFSRRYFQEGGRSDGIFGTRT
DYAAALGQTPEPPQPFFDQPVENAEPVAEIGQDEFIRFWRNPVKVWLQQQ
LAWSEPHIGEAWEPAEPFEPQHADQIAETYIEARREGRDFAQTAARIGAE
SLLPSGELGRLWQQNFQTAAKQIDTAVLNSPKLPPLSYAIPSDGQILKGS
LGNLYRCGQVFYAYGKPNAPQRIAFLLEHLIFCAVMPSEAETRQTFIVQS
GETEILAEIAQDRALQLLSEWMAFFNIGQNRPLPFFAKTSLAAAEAFAQK
QDWEAALKKAQTAYYGNKVSKGQKDYTEVALVFGNASQNPLEQPLFENLA
RLLADTLAAAEKREGAGAA
>gid:336963  recD  exodeoxyribonuclease V alpha subunit
MERQTDEFAQAAARAAIRFLEHYASSGDEVLANCTERLFQALQNGHSFIR
LSGGEADALSALAPVVGTSAAPLILEGRRLFLGRMWQLEYDLAAEIKRLA
AADTSAPDAAGARQNLAKWFQGTGSEGQRDAAALALLQSFMVITGGPGTG
KTTTVAKLLALICGKDENLPNIALAAPTGKAAAHMARALHRAINGFDALE
AVRRHLLKLEGQTVHRLLKLRPPKMQAAFNPVYPLPFDVLVIDEASMLDT
ALMLQLLKAVKTGARVILLGDENQLPSVGIGAVLSVLSQKTVLDGETHQR
LAGFLPEHGFSVSANPPVLAQNTAHLSFSHRFGDNSGIGCLARAAVSGDE
GAWALFDRFPDELEHSECSPNARVERLYRAHKAYWQAVKDGNIEAAYAGI
SDIVVLAAWRQDAEDFNEAYCRHVRRKMNIPEHLAYFAGEPIMIRQNDYA
LELFNGDIGLIMEDVGRQGSLAAYFADADGFKKVAVSCLPEFEPAFAMTV
HKSQGSEYREVWLLPPSAAPSDEGDDALSGLSKELLYTAITRAREKFVFF
GGEETFRQAAATVKTRQTALGSMLERVFSQG
>gid:334388  recG  putative DNA helicase
MMSPETRKQLKITDVSAKKLDKLNLHTAWDLVLHLPLRYEDETHIMPIKD
APIGVPCQVEGEVIHQEVTFKPRKQLIVQIADGSGSVLFLRFIHFYASHQ
KQTAIGKRIRAVGEIKHGFYGDEMIHPKIRDAEGGGLAESLTPVYPTVNG
LNQPTLRRIIQTALDVTPLHDTLPDALLCRLKLPHLAESLRLLHSPPPSF
TIHQLSDGTLPAWQRLKFDELLAQQLSMRLARQKRIGGTAAALGGDGTLT
QALRQALPFALTDAQEKVVSEICRDMAQTYPMHRLLQGDVGSGKTIVAAL
SALTAIESGAQVAVMAPTEILAEQHFIKFKQWLEPLGIEVVRLFGSLRKK
AKDEAKAKLADGSVKIAVGTHALFSDGVAFHNLGLTIVDEQHRFGVAQRL
ALKNKGREVHQLMMSATPIPRTLAMSFFADLDVSVIDELPPGRTPIKTRL
VNNVRRAEVEGFVLGTCRKGRQAYWVCPLIEESETLQLQTAAETLARLQT
ALPELNIGLVHGRMKAAEKAEVMARFSSGGLNVLVATTVIEVGVDVPNAA
LMVIEHAERMGLAQLHQLRGRVGRGAAESVCVLLFAEPLGELAKARLKVI
YEHTDGFEIARQDLNIRGPGEFLGARQSGVPMLRFAKLEEDLHLLEQARE
TAPMLIEQNPEIVEAHLARWLSGREGYLGV
>gid:335783  recJ  putative single-stranded-DNA-specific exonuclease
MSVKIQTRSVNTDVFNHLLTAGADPLIARLCASRGVQSPAELDDKLASLL
PYQTLTNCEAAARRLADAVERQEKILIVADYDADGATACAVGLDGLAAMG
AKVDFLVPNRFEHGYGLTPELAEIAAAQGVDLLITVDNGIASIAGVARAQ
ALGLDVIVTDHHLPAETVPDCIIVNPNQKGCGFPSKSLAGVGVIFYVLMA
LRAELRRRNYFSDGLKEPNLGDLLDLVALGTVADVVSLDHNNRILVSQGL
KRMRSGKMRPGIRALFEVARRDWRKAQPFDMGFALGPRINAAGRLDDMSV
GIACLLARDDSEAQELAAQLNNLNIERREIEQSMLQDALNAFPETLPSGQ
MTLVAYRDDFHQGVVGIVASRLKDRFYRPTIVFAPADNGEVRGSGRSIPN
LHLRDALDLVSKRHPDLILKFGGHAMAAGLSILEHNIPAFQTTFEEAVRE
MVCEDDLSQTFITDGSLPACDITLEQAQNLARHVWGQGFAPPSFTDEFHV
VRQQPLGAEGKHKKVWLQKDGCEFEAMFWRCSEDIPEYIRTVYRPVANEW
RNNLELQLYIDYWEAA
>gid:335424  recN  putative DNA repair protein
MLLTLSLRDFVIVENLNLDFQSGFTVLTGETGAGKSITLDAIGLLLGDKA
DYSQVRSGAKEAQLSALFDISHLPTLKAELYEQGLLNDGEEELSIRRIID
AKGKSRSFINNQAATLAQLKAVGSQLIDIHGQNAHHSLNQEAAQRELLDA
FAGSRAQAETVRQLYQNWANSKKALQEAQEQAENIALEQERLEWQFNELN
QLDIKQGEWEALSQSHDSLAHSAELLQAAEEVGSKIDGDNGIQRHIYQCQ
KLLANLQNIEPRFAESLNMLASIEAELGEISANMRDVAGRSDINPNELAA
QEQRMGELMGMARKYRIEPEELPAKLAEIEERLQSLQAAADLDALEHNVA
HNFAEYQEAAHILSAMRHQAAERLSGETTEHMQHLAMKGARFDIVLLPSS
PTAHGLEQVQFQVAANKGNPPRPLNKVASGGELARISLALQVVASQYTQV
PTLIFDEVDTGIGGGVAEMVGKALRALGRKHQVLAVTHLPQVASCGENHW
RVRKHSEGEQTVSEISILDEIQRIEEVARMLGGEVITDTTRQHAAELLQL
ASKNSLF
>gid:339739  recO  DNA repair protein (recombination protein o)
MMSEHRVNHEPVFLLASSPWRESSLRVEAFSRRYGRVALLARSARKRQSE
LRGVLVPFVLVSASWYGSQELKTLHRAEWIGGWPQPQGRALFSGLYVNEL
MLKLTVREDPLPELYDALAEVMEAVCCKAAYIDDLRRFEWRLLNLLGVAP
DLNRDGDGGTIAAGGTYLVRPETAVFPVGKGFAVPPHAAGVVAPGQSLID
LREGSFRTAESLQQALKITRLFIRHLLPEGLKSRQVLEQIRQFDRKETAR
ETVPTSDGTASNAV
>gid:340548  recQ  ATP-dependent DNA helicase
MHRPTAKQILHEVFGYPEFRGRQESIVNALAGGRSLMVLMPTGGGKSLCY
QIPALMREGVAVVVSPLIALMNDQVANLHVAGIEAAAVNSGTSADEAREI
ADKLAQGRLKLLYVAPERLVTDRFLRFLDQQTVSLFAIDEAHCVSQWGHD
FRPEYQQLGMLAERYPNVPRIALTATADAATRADIKHYLHLDDAPEFVSS
FDRPNIYYQVIEKNNGKKQLLDFIRKEMTGQSGIVYCLSRKKVEDVAQFL
RENGLNAIPYHAGLSMDVREENQRRFTHEDNIIVVATVAFGMGIDKPDVR
FVAHLDMPQSVEHFYQESGRAGRDGLPAASWLCYGLNDWVLLRERIAEGN
SDEVQKQIEMQKLDAMLAVCETAACRRVLLLKHFGEASEPCGHCDNCLHP
PVRFDGTVLVQKLLSCVYRAGQRFAAGYITNILRGKSDDWIRGNRHEQLS
TFGIGTELSDKEWRSVIRQCISLGYLTVNITRYQALQLTEAAKKVLKGET
EVMLRPLKRDKPAARTLKDNWLRTEREERLWQALRVWRMKQAEAEGIPAY
MIFGDKTLRDLVEKMPQDLNGLHDIYGLGEAKIDRFGHGILEVCRNAAGF
SRDAVIRPQTEREQQLRQKLEAWRYEQARAENCALHAVLSDESLADMLAD
TPETETDLEGVYGLGSVRAAKYGRDILAVCRPFSDGIDETAKRKRRLMRA
LIQWCGETAKHEQSEPYRILSKAALRAIAAKQPEGLAELAAVYGVGEEKA
ARYGAAVLAVLERNAV
>gid:336983  recR  putative recombination protein
MSHKKQDAFQGLIDALKVLPNVGPKSAQRIAYHLLQHKRKEAEKLVDALQ
TALKQVDHCARCNTFCEGGLCDICADETRDGRRLMVVHMPADVSNMEAAN
CHDGLYFVLMGQINTALGMDVSAIALDRLAQRLGGGEVEEIIIATAFTAE
GNATAYVLSEFFKNLPYKVSRLSQGIPLGGELEYVDAGTLAQAVYERRLI
KEGGA
>gid:338066  rep  ATP-dependent DNA helicase
MMKLNPQQLEAVRYLGGPLLVLAGAGSGKTGVITQKIKHLIVNVGYLPHT
VAAITFTNKAAAEMQERVAKMLPKPQTRGLTICTFHSLGMKILREEANHI
GYKKNFSILDSTDSAKIIGELLGGTGKEAVFKAQHQISLWKNDLKTPEDV
VQTASNIWEQQTARVYASYQETLQSYQAVDFDDLIRLPAVLLQQNSEVRN
KWQRRLRYLLVDECQDTNTCQFTLMKLLTGAEGMFTAVGDDDQSIYAWRG
ANMENLRKMQENYPQMKVIKLEQNYRSTARILKIANKVIENNPKLFTKKL
WSKLGEGEPVKVVACQNEQHEADWVVSQIVKQKLIGGDKTQYADFAVLYR
GKHQARIFEEALRGARIPYRLSGGQSFFDKAEIKDVLSYVRLLANPNDDP
AFLRAVTTPKRGIGDVTLGKLNTYAHEHECSLYEAAQNEEALATLNNTNR
QHLQAFMDMFGSYRAKAETGEAGEFINSLLEEIDYENHLLASEEGKAGEI
KWRNVGDLVSWFARKGGEDGKNIIELAQTVALMTLLEGKDEEETDAVSLS
TLHAAKGLEYPYVFLVGCEEGVLPHNDSIEEGNVEEERRLMYVGITRAKR
QLTLTHCVKRKKQGTWQFPEPSRFIDEMPQEDLKILGRKGGEPIVSKEEG
RRNLADIIGRLDNLKKSGAAD
>gid:338912  rnhA  ribonuclease HI
MNQTVYLYTDGACKGNPGAGGWGVLMRYGSHEKELFGGEAQTTNNRMELT
AVIEGLKSLKRRCTVIICTDSQYVKNGMENWIHGWKRNGWKTAAKQPVKN
DDLWKELDALVGRHQVSWTWVKGHAGHAENERADDLANRGAAQFS
>gid:331718  rnhB  ribonuclease HII
MHILTAGVDEAGRGPLVGSVFAAAVILPETFDLPGLTDSKKLSEKKRDAL
AEMIKNQAVAWHVAAAGPEEIASLNILHATMLAMKRAVDGLAVRPEKIFI
DGNRIPEHLNIPAEAVVKGDSKIIEISAASVLAKTARDAEMYALAQRHPQ
YGFDKHKGYGTKQHLEALEKYGVLPEHRRDFAPVRNLLAQQALF
>gid:340578  ruvA  Holliday junction DNA helicase
MISRLTGKLVEKNPPQIVIDVNGVGYEADVSMQTFYNLPPVGESVQLFTQ
LIIREDAHLLFGFATAEERKTFRQLIKVGGIGAKTALGILSAMTADELAQ
AVAEEDVKRLSSAPGIGKKTAERMVLELRGKLVAHAVTDGLFAAAPAADE
TEDIVGTLLALGYSEREAKAAVKGVPEGTDVGEGVRLALKNLLK
>gid:337007  ruvB  putative Holliday junction DNA helicase
MLQTDNLTAAQPQRIVAAQTASAQEELLERALRPKTLDDYIGQHKAKEQL
AIFIQAAKKRGEALDHVLLFGPPGLGKTTLAHIIAKELGVNLRQTSGPVL
ERAGDLAALLTNLDPHDVLFIDEIHRLSPVVEEILYPALEDYRLDIMIGE
GPAARSVKIDLPPFTLVGATTRAGMLTNPLRDRFGIVSRLEFYENRDLAT
IVSRSAQLLQLDMSEEGAEEIAKRSRGTPRIANRLLRRVRDFADVKNNGT
IDGGIADAALSMLDVDVQGLDVMDRKFLEAVLHKFGGGPVGLDNVAAAIG
ESTDTIEDVIEPYLIQQGFLQRTPRGRMATERAYLHFGLPVEK
>gid:337841  ruvC  crossover junction endodeoxyribonuclease
MNMSATVRILGIDPGSRVTGFGVIDVRGRDHFYVASGCIKTPADAPLADR
IAVIVRHIGEVVTVYKPQQAAVEQVFVNVNPASTLMLGQARGAALAALVS
HKLPVSEYTALQVKQAVVGKGKAAKEQVQHMVVQMLGLSGTPQPDAADGL
AVALTHALRNHGLAAKLNPSGMQVKRGRFQ
>gid:338128  ssb  single-stranded binding protein
MSLNKVILIGRLGRDPEVRYMPNGEAVCNFSVATSETWNDRNGQRVERTE
WHNITMYRKLAEIAGQYLKKGGLVYLEGRIQSRKYQGKDGIERTAYDIVA
NEMKMLGGRNENSGGAPYEEGYGQSQEAYQRPAQQSRQPASDAPSHPQEA
PAAPRRQPVPAAAPVEDIDDDIPF
>gid:339278  tag  DNA-3-methyladenine glycosylase I
MNYCEFAASLPENTDNPNKHYHDTQYGFPIEDDNELFERLVLEINQAGLS
WTLMLKKRQAFQTAFEGFDIDTVAAFGEADIERLLADAGIVRNRLKIDAA
IFNARQIQALQQEYGSFKNWLDAHHPRSKDEWVKLFKKHFKFVGGEIVGE
FLMSTGYLKGAHAESCPVYRETLKYHPKWLDAI
>gid:332072  topA  DNA topoisomerase I
MAKNLLIVESPSKAKTLKKYLGGDFEILASYGHVRDLVPKSGAVDPDNGF
AMKYQLISRNGKHVDAIVAGAKEAENIYLATDPDREGEAISWHLLEILKS
KRGLKNIKPQRVVFHEITKNAVLDAVANPREIEMDLVDAQQARRALDYLV
GFNLSPLLWKKIRRGLSAGRVQSPALRLICERENEIRAFEAREYWTVHLD
SHKGRSKFTAKLAQYNGAKLEQFDLPNEAAQADVLKELEGKEAVVTAIEK
KKRSRNPAAPFTTSTMQQDAVRKLGFTTDRTMRTAQQLYEGIDVGQGAIG
LITYMRTDSVNLADEALTEIRHYIENKIGKEYLPSAAKQYKTKSKNAQEA
HEAIRPTSVYRTPESVKPFLSADQFKLYQMIWQRTVACQMTPAKFDQTTV
DITVGKGVFRVTGQVQTFAGFLSVYEESSDDEEGEDSKKLPEMSEGDKLP
VDKLYGEQHFTTPPPRYNEATLVKALEEYGIGRPSTYASIISTLKDREYV
TLEQKRFMPTDTGDIVNKFLTEHFAQYVDYHFTAKLEDQLDEIADGKRQW
IPLMDKFWKPFIKQVEEKEGIERAKFTTQELDETCPKCGEHKLQIKFGKM
GRFVACAGYPECSYTRNVNETAEEAAERIAKAEAEQAELDGRECPKCGGR
LVYKYSRTGSKFIGCANYPKCKHVEPLEKPKDTGVQCPQCKKGNLVERKS
RYGKLFYSCSTYPDCNYATWNPPVAEECPNCHWPVLTIKTTKRWGVEKVC
PQKECGWKEQIEPPAPKE
>gid:336923  ung  putative uracil-DNA glycosylase
MDTWHDALGGEKQQPYFQEILNAVRQERLSGQIIYPPAADVFNAFRLTAF
DRVKAVILGQDPYHGAGQAHGLAFSVRQGIRIPPSLLNIYKELETDIEGF
SIPAHGCLTAWAEQGVLLLNTVLTVRAGQAHSHALLGWERFTDTVIRQLA
THRKHLVFMLWGGYAQQKRKLIDSQNYLILTAPHPSPLSAYRGFFGCRHF
SQANSYLSRHGIDPINWKL
>gid:336200  uvrA  putative excinuclease ABC subunit A
MCNHHPKHSHGNDTIRIRGARTHNLKNVDLDIPRHKLVVVTGLSGSGKSS
LAFDTLYAEGQRRYVESLSAYARQFLQMMDKPDVDLIEGLSPAISIEQKS
TSHNPRSTVGTVTEIHDYLRLLYARVGTPYCPEHKLPLSSQTVSQMVDAV
LKLPEDTRVMILAPAVRERKGEFVDFFADLQAQGFARVRVDGEVYQLDEV
PKLEKNIKHNIDVVIDRVKVKADIKQRLAESFETALRHGNERALAMEMDS
GEEHWFSARFACPVCSYSLPELEPRLFSFNNPMGSCPTCDGLGNTNFFDP
EKVVAHPELSLASGAIDGWDKRNQFYFQMIQSLARHYGFDVQAAWETLPA
KIKKVVLHGSGKEVIDFTYLSERGTTFNRSHAFEGIIPNLERRYRETDSE
TVREKLREYQNHRACPSCGGARLRKEARYVYVSGEPLHEVSAWPLTKTHR
FFETLDLDGNKKQIAEKILKEITERLGFLINVGLDYLNLSRSAETLSGGE
AQRIRLASQIGSGLTGVMYVLDEPSIGLHQRDNDRLLATLKRLRDLGNSV
IVVEHDEDAIREADFVVDMGPGAGEHGGNVLIADTPENVAKCENSVTGQY
LSGKKSIAVPSERTPVNPGRMLVLKGARGNNLKNVTLELPLGLITCITGV
SGSGKSTLINDTLAKITARELNRAQEEPAPYDDIRGLEHLDKVINVDQSP
IGRTPRSNPATYTGLFTPIRELFASVPLSRERGYNVGRFSFNVKGGRCEA
CQGDGVIKVEMHFLPDVYVPCEVCHGKRYNRETLEIQYKGKNISQVLDMT
VEEACEFFDAVPTVSRKLQTLMDVGLGYIRLGQSATTLSGGEAQRVKLAL
ELSKRDTGRTLYILDEPTTGLHFADIALLLEVIGRLKGKGNSIVIIEHNL
DVIKTADWIVDLGPEGGDGGGRIIASGSPEEVAKVKGSYTGKYLKNIL
>gid:337462  uvrB  excinuclease ABC subunit B
MEVIRYPDSPFKLHQPFPPAGDQPTAIAGLLEGLSDGLAYQTLLGVTGSG
KTYTMANVIAQSGRPAIIMAHNKTLAAQLYAEMREFFPENAVEYFVSYYD
YYQPEAYVPSRDLFIEKDSAINEHIEQMRLSATKNLMTRDDVIIVATVSA
IYGIGDPTEYQQMVLSVKEGDTIEQRDIIATLVSMQYERGDLDFKRGSFR
VRGDVIDVYPAESSENALRISLFDDEIDRLDMFDPLSGSLHQRVGRYTVF
PSSHYVTPRDTVLRACDSIKEELRERIDFFTKENRPVEQQRIEQRTRFDL
EMLYEMGFCKGIENYSRHFSGKKEGEPPPTLMDYLPSNAIMFIDESHVTV
TQIGGMYKGDASRKQNLVDYGFRLPSARDNRPLKFHEFEKVMPQTVFVSA
TPAKYEEEHAGQVVEQVVRPTGLVDPQIIIRPVATQVDDLMSEINDRIQK
GERVLVTTLTKRMAEQLTDYYSELGIKVRYLHSDIDTVERVEIIRDLRLG
LFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRSHRSLIQTIGRAARN
VNGVAILYADKITDSMKAAIDETERRREKQIKFNEEHGIVPQQIKKQVKD
IIDGVYHEEDSGKGRRQGKNKVKVGEIHNEEDAIKEIAKLEKAMQQAARD
LQFEEAAVLRDRIRNIKENLLFGAE
>gid:337444  uvrC  excinuclease ABC subunit C
MPSEAVFQIIDMNTENRSPEQFDIPLFLKNLPKLPGVYRFFDEGGKVLYV
GKAVNLKRRVSGYFQKNDHSPRIALMVKQVHHIETTITRSEAEALILENN
FIKALSPKYNILFRDDKSYPYLMLSGHQYPQMAYYRGTLKKPNQYFGPYP
NSNAVRDSIQILQKVFMLRTCEDSVFEHRDRPCLLYQIKRCTAPCVGHIS
EEDYRDSVRQAATFLNGKTDELTRTLQHKMQTAAANLQFEEAARYRDQIQ
ALGIMQSNQFIDSKNPNNPNDIDLLALAVSDGLVCVHWVSIRGGRHVGDK
SFFPDTKNDPEPNGQDYAEAFVAQHYLGKSKPDIIINNFPVPDALKEALE
GEHGKQMQFVTKTIGERKVWLKMAEQNAQMAIAQRRLQQSNQQHRIDELA
KILGMDSDGLNRLECFDISHTQGEATIASCVVYDEQNIQPSQYRRYNITT
AKPGDDYAAMREVLTRRYGKMQEAEANGETVKWPDAVLIDGGKGQIGIAV
SVWEELGLHIPLVGIAKGPERKAGMEELILPFTGEVFRLPPNSPALHLLQ
TVRDESHRFAITGHRKKRDKARVTSSLSDIPGVGSKRRQALLTRFGGLRG
VIAASREDLEKVEGISKALAETIYEHLH
>gid:331498  uvrD  DNA helicase II
MFPDQSAPNLLQGLNPEQLSAVTWPPQSALVLAGAGSGKTRVLTTRIAWL
LQTGQASVHSIMAVTFTNKAAKEMQTRLGAMIPVNVRAMWLGTFHGLCHR
FLRLHHRDAGLPSSFQILDSGDQLSLIKRLLKSLNIAEEIIAPRSLQGFI
NAQKESGLRASVLSAPDPHTRRMIECYAEYDKICQREGVVDFAELMLRSY
EMLQSNEILRRHYQNRFNHILVDEFQDTNKLQYAWLKLMAGGNTAVFAVG
DDDQSIYRFRGANVGNMTALMEEFHIDAPVKLEQNYRSVGNILASANAVI
ENNDERLGKNLRTDAEAGDKIRYYSAFTDLEEAQFIVDETKALEREGWDL
DEIAVLYRSNAQSRVIEQSLFRSGIPYKIYGGLRFYERQEIKHALAYLRL
AVNPDDDNALLRVINFPPRGIGARTIENLQTASQEQGITLWQAACNAGAK
ATKIAAFVRLIEALRNQVGQMSLSEIIVGILKDSGLTEHYRTQKGDNQDR
LDNLDELVNAAIEFKPEDSNFETLPDNISDDPAFPILAFLSNAALESGEN
QAGAGEKAVQLMTVHAAKGLEFNAVFLTGMEEGRFPSEMSLAERGGLEEE
RRLMYVAITRARKRLYITMAQQRMLHGQTQFGIVSRFVEEIPPEVLHYLS
VKKPAYDRYGNTRQTAAPKDKIIDDYKQPQTYAGFRIGQNVRHAKFGTGV
IIDAADKGESARLTINFGKQGVKELDTKFAKLEAM
>gid:333235  vsr  patch repair protein
MTDIFTTSKRSFVMLKIHSKETKPEVLVRKFLFFQGFRYRKNDKRYVGKP
DIVLSKYKTVVFIHGCFWYGHSCNKGHIPKSNTDFWLEKITKNCERDIKN
ETELEKIGFKVIVVWECELKNKAICRERLNRLVREIKDAV
>gid:333942  xerC  putative integrase/recombinase
MVLDGFAAHFDAYLENIVREGKSEHTVAAYRRDLEELFALLAQMPSEDAG
GVPQGLSQRDFTAALRRLSQRGLNARTLARKLSSWRQYCAWLVKRGLLHT
DPTADIKPPKQPERVPKALPQEWLNRMLDLPVDGGDPLAVRDHALFELMY
GSGLRVSEIHGLNADDVYLDEAWVHVTGKGRKQRQVPLTGKSVEALKNYL
PLRQTASDGKALFTGRNGTRLSQRQIQKRLAQWAAQNGDGRHVSPHMMRH
SYAGHLLQASRDIRAVQELLGHSSLSTTQIYTKLDFDHIARLYDEAHPRA
KRQDE
>gid:335463  xerD  putative integrase/recombinase
MEEGLIDRLLETLWLDRRLNQNTLNGYRRDLEKIARRLSQSGRMLKDADE
ADLAAAVYVDGEQRSSQARALSACKRLYIWMEREGIRTDNPTRLLKPPKI
DKNIPTLITEQQISRLLAAPDTDTPHGLRDKALLELMYATGLRVSEAVGL
NFGNVDLDRGCITALGKGDKQRMVPMGQESAYWVGRYYTEARPALLKGRS
CDALFVSQKKTGISRQLAWMIVKEYASQAGIGHISPHSLRHAFATHLVQH
GLDLRVVQDMLGHADLNTTQIYTHVANVWLQGVVKEHHSRN
>gid:337632  xseA  exonuclease VII large subunit
MSDFFHSDVLSVSELNAFAKSLLENHLAGLWIAGEVSNLTRAASGHYYFS
LKDSRAQVRCAMFKGAAARLAKPLKEGDHIEVSGKISIYEARGEFQITVN
EVRLKGLGQLYEAYERLKAQLQAEGAFAAERKKPLPTRPQCIGIVTSLAA
AALRDVVTTLKRRAPEIPVIVYPTPVQGAGSELQIAQAIKTASQRAECDV
LIVCRGGGSIEDLWAFNEEPVVRAIEACTVPVVSGVGHETDFTLADFVAD
VRAPTPTGAAELVSPNRQESLHRLAQAQGRLKTVLEQRYFDASQKLDWLA
RQIRHPRQKLDEQRASIGKLAQTLSYSMKQNLRAHTARFERQTQALQHYR
PDVSVCKNNIVRLQTALPAAFSQLLTHRRQSLTAQAALLEAVSPQHILER
GFSVVKNTRGQVIRNADVLKQGQKLHITFADGETDVRVSKEQGQQDLFDC
I
>gid:340594  xseB  exodeoxyribonuclease small subunit
MKKNAPKSFEEALSRLESLTQAMQGEMPLEDALAAYQEGNELVIYCQTKL
AQVEQKLQVLDADGLKELNLESDE
>gid:340019  xthA  exodeoxyribonuclease III
MKITTWNVNSLNVRLPQVQNLLADNPPDILVLQELKLDQDKFPAAALQMM
GWHCVWSGQKTYNGVAIVSRNAPEDVHIGLPALPDDPQRRVIAATVGGVR
VINVYCVNGEALDSPKFKYKEQWFAALTEFVRDEMARHGKLVLLGDFNIA
PADADCYDPEKWHEKIHCSSVERQWFQNLLDLGLADSLRQVHPEGAFYTW
FDYRGAMFQRKLGLRIDHILVSPAMAEALKDVRVDLETRALERPSDHAPV
TAEFDW