TitleGenColors Logo
spacer
Home spacerGenomes
spacerMethods
spacerDocumentation spacerContactspacer spacerLeibniz FLI
spacer
QuickSearch
2024-05-19 01:50:39

Gene list

Applied filters:

COG category: Replication, recombination and repair
Organism: Helicobacter pylori J99, J99

Number of genes found: 104

Free access
Sort by:

 

Hide UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Helicobacter pylori J99, J99
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
M.HpyI TYPE II DNA MODIFICATION ENZYME (METHYLTRANSFERASE)SubName: Full=TYPE II DNA MODIFICATION ENZYME (METHYLTRANSFERASE); chromosome CDS1263527 990 - 0.367677
cagH cag island proteinSubName: Full=Cag island protein; chromosome CDS536477 1113 - 0.412399
cagI cag island proteinSubName: Full=Cag island protein; chromosome CDS535321 1146 - 0.390925
cagS cag island proteinRecName: Full=CAG pathogenicity island protein 13; chromosome CDS529660 600 - 0.331667
deaD ATP-DEPENDENT RNA HELICASE DEADSubName: Full=ATP-DEPENDENT RNA HELICASE DEAD; chromosome CDS252488 1476 + 0.428184
dnaA CHROMOSOMAL REPLICATION INITIATOR PROTEINRecName: Full=Chromosomal replication initiator protein DnaA; chromosome CDS1557789 1374 - 0.400291
dnaB REPLICATIVE DNA HELICASERecName: Full=Replicative DNA helicase; EC=3.6.4.12; chromosome CDS1399639 1461 - 0.410678
dnaE DNA POLYMERASE III, ALPHA CHAINRecName: Full=DNA polymerase III subunit alpha; EC=2.7.7.7; chromosome CDS1480574 3636 - 0.418317
dnaG DNA PRIMASERecName: Full=DNA primase; EC=2.7.7.-; chromosome CDS10067 1680 + 0.392857
dnaN DNA POLYMERASE III, BETA CHAINRecName: Full=DNA polymerase III subunit beta; EC=2.7.7.7; chromosome CDS489047 1125 + 0.375111
dnaX DNA POLYMERASE III SUBUNITS GAMMA AND TAUSubName: Full=DNA POLYMERASE III SUBUNITS GAMMA AND TAU; chromosome CDS732907 1749 - 0.399085
exoA EXODEOXYRIBONUCLEASESubName: Full=EXODEOXYRIBONUCLEASE; chromosome CDS1555197 753 - 0.38247
gyrA DNA GYRASE SUBUNIT ARecName: Full=DNA gyrase subunit A; EC=5.99.1.3; chromosome CDS714771 2487 + 0.415762
gyrB DNA GYRASE SUBUNIT BRecName: Full=DNA gyrase subunit B; EC=5.99.1.3; chromosome CDS490184 2322 + 0.40913
holB putative DNA poymerase III subunit delta'SubName: Full=Putative DNA poymerase III subunit delta; chromosome CDS1283633 657 + 0.378995
jhp0043 putative TYPE II DNA MODIFICATION ENZYME (METHYLTRANSFERASE)SubName: Full=Putative TYPE II DNA MODIFICATION ENZYME (METHYLTRANSFERASE); chromosome CDS49491 693 - 0.396825
jhp0044 putative TYPE II DNA MODIFICATION ENZYME (METHYLTRANSFERASE)SubName: Full=Putative TYPE II DNA MODIFICATION ENZYME (METHYLTRANSFERASE); chromosome CDS50161 558 - 0.38172
jhp0045 putative TYPE II DNA MODIFICATION ENZYME (METHYLTRANSFERASE)SubName: Full=Putative TYPE II DNA MODIFICATION ENZYME (METHYLTRANSFERASE); chromosome CDS51152 1032 - 0.325581
jhp0051 putativeSubName: Full=Putative; chromosome CDS60127 363 + 0.358127
jhp0057 putativeSubName: Full=Putative; chromosome CDS64483 261 + 0.402299
jhp0060 putativeSubName: Full=Putative; chromosome CDS66647 354 + 0.40678
jhp0085 TYPE II DNA MODIFICATION ENZYME (METHYLTRANSFERASE)SubName: Full=TYPE II DNA MODIFICATION ENZYME (METHYLTRANSFERASE); chromosome CDS94286 834 + 0.394484
jhp0185 putativeSubName: Full=Putative; chromosome CDS201352 357 + 0.392157
jhp0227 putativeSubName: Full=Putative; chromosome CDS248871 285 - 0.364912
jhp0244 TYPE II DNA MODIFICATION ENZYME (METHYLTRANSFERASE)SubName: Full=TYPE II DNA MODIFICATION ENZYME (METHYLTRANSFERASE); chromosome CDS266260 1173 - 0.31202
jhp0248 TYPE II DNA MODIFICATION ENZYME (METHYLTRANSFERASE)SubName: Full=TYPE II DNA MODIFICATION ENZYME (METHYLTRANSFERASE); chromosome CDS268656 759 + 0.399209
jhp0316 putativeSubName: Full=Putative; chromosome CDS343351 801 + 0.414482
jhp0317 putativeRecName: Full=Putative Holliday junction resolvase; EC=3.1.-.-; chromosome CDS344148 405 + 0.419753
jhp0336 putativeSubName: Full=Putative; chromosome CDS365433 2337 - 0.353445
jhp0398 putativeSubName: Full=Putative; chromosome CDS424501 1176 - 0.404762
jhp0402 putativeSubName: Full=Putative; chromosome CDS428582 867 - 0.381776
jhp0418 putativeSubName: Full=Putative; chromosome CDS450844 768 - 0.363281
jhp0433 putative TYPE II DNA MODIFICATION ENZYME (METHYLTRANSFERASE)SubName: Full=Putative TYPE II DNA MODIFICATION ENZYME (METHYLTRANSFERASE); chromosome CDS467389 930 + 0.351613
jhp0435 TYPE II DNA MODIFICATION ENZYME (METHYLTRANSFERASE)RecName: Full=Cytosine-specific methyltransferase; EC=2.1.1.37; chromosome CDS469030 1056 + 0.382576
jhp0441 putativeSubName: Full=Putative; chromosome CDS478667 546 + 0.377289
jhp0457 putativeSubName: Full=Putative; chromosome CDS495720 639 + 0.363067
jhp0549 ENDONUCLEASE IIIRecName: Full=Endonuclease III; EC=4.2.99.18; chromosome CDS599604 657 + 0.347032
jhp0595 putativeSubName: Full=Putative; chromosome CDS658536 630 + 0.392063
jhp0609 putativeRecName: Full=UPF0763 protein jhp_0609; chromosome CDS674254 516 + 0.337209
jhp0617 INTEGRASE-RECOMBINASE PROTEIN (XERCD FAMILY)SubName: Full=INTEGRASE-RECOMBINASE PROTEIN (XERCD FAMILY); chromosome CDS685741 1071 + 0.379085
jhp0628 putativeSubName: Full=Putative; chromosome CDS699704 831 + 0.380265
jhp0629 putative TYPE II DNA MODIFICATION ENZYME (METHYLTRANSFERASE)SubName: Full=Putative TYPE II DNA MODIFICATION ENZYME (METHYLTRANSFERASE); chromosome CDS700587 1215 + 0.316049
jhp0657 putativeSubName: Full=Putative; chromosome CDS735622 423 + 0.404255
jhp0718 putativeSubName: Full=Putative; chromosome CDS797664 1290 + 0.372093
jhp0746 putativeSubName: Full=Putative; chromosome CDS826848 603 - 0.368159
jhp0756 putative TYPE II DNA MODIFICATION ENZYME (METHYLTRANSFERASE)SubName: Full=Putative TYPE II DNA MODIFICATION ENZYME (METHYLTRANSFERASE); chromosome CDS833787 819 - 0.333333
jhp0762 putativeRecName: Full=UPF0102 protein jhp_0762; chromosome CDS840912 345 + 0.336232
jhp0774 DNA-BINDING PROTEIN HURecName: Full=DNA-binding protein HU; chromosome CDS852229 285 + 0.403509
jhp0802 putativeSubName: Full=Putative; chromosome CDS880898 462 - 0.348485
jhp0832 putativeSubName: Full=Putative; chromosome CDS912007 288 - 0.336806
jhp0847 putative ATP-DEPENDENT HELICASESubName: Full=Putative ATP-DEPENDENT HELICASE; chromosome CDS928330 2031 + 0.400788
jhp0896 putativeSubName: Full=Putative; chromosome CDS989179 693 - 0.341991
jhp0926 putativeSubName: Full=Putative; chromosome CDS1022556 1017 - 0.347099
jhp0928 putativeSubName: Full=Putative; chromosome CDS1025324 6696 + 0.377091
jhp0941 INTEGRASE/RECOMBINASE (XERCD FAMILY)SubName: Full=INTEGRASE/RECOMBINASE (XERCD FAMILY); chromosome CDS1043684 996 - 0.319277
jhp0951 INTEGRASE/RECOMBINASE (XERCD FAMILY)SubName: Full=INTEGRASE/RECOMBINASE (XERCD FAMILY); chromosome CDS1055965 1074 - 0.318436
jhp1042 putativeSubName: Full=Putative; chromosome CDS1156109 804 - 0.369403
jhp1044 putativeSubName: Full=Putative; chromosome CDS1157436 3465 - 0.371429
jhp1048 putativeSubName: Full=Putative; chromosome CDS1166046 435 - 0.363218
jhp1050 TYPE II DNA MODIFICATION ENZYME (METHYLTRANSFERASE)RecName: Full=Cytosine-specific methyltransferase; EC=2.1.1.37; chromosome CDS1167304 966 - 0.365424
jhp1168 putativeRecName: Full=Protein jhp_1168; chromosome CDS1300700 1023 - 0.368524
jhp1271 TYPE II DNA MODIFICATION ENZYME (METHYLTRANSFERASE)SubName: Full=TYPE II DNA MODIFICATION ENZYME (METHYLTRANSFERASE); chromosome CDS1388981 1080 - 0.330556
jhp1284 TYPE II DNA MODIFICATION ENZYME (METHYLTRANSFERASE)SubName: Full=TYPE II DNA MODIFICATION ENZYME (METHYLTRANSFERASE); chromosome CDS1404425 1950 + 0.353846
jhp1303 putativeSubName: Full=Putative; chromosome CDS1433171 1233 + 0.352798
jhp1304 putativeSubName: Full=Putative; chromosome CDS1434471 930 + 0.365591
jhp1375 putativeRecName: Full=Exodeoxyribonuclease 7 small subunit; EC=3.1.11.6; AltName: Full=Exodeoxyribonuclease VII small subunit; Short=Exonuclease VII small subunit; chromosome CDS1507988 261 - 0.363985
jhp1392 putativeSubName: Full=Putative; chromosome CDS1523537 921 + 0.313789
jhp1438 DNA POLYMERASE IIISubName: Full=DNA POLYMERASE III; chromosome CDS1585662 972 - 0.408436
jhp1481 putativeSubName: Full=Putative; chromosome CDS1629946 765 - 0.398693
lig DNA LIGASERecName: Full=DNA ligase; EC=6.5.1.2; AltName: Full=Polydeoxyribonucleotide synthase [NAD(+)]; chromosome CDS618855 1971 - 0.403349
mfd TRANSCRIPTION-REPAIR COUPLING FACTORRecName: Full=Transcription-repair-coupling factor; Short=TRCF; EC=3.6.4.-; chromosome CDS1606102 3006 + 0.401198
mod_1 putative TYPE III DNA MODIFICATION ENZYME (METHYLTRANSFERASE)SubName: Full=Putative TYPE III DNA MODIFICATION ENZYME (METHYLTRANSFERASE); chromosome CDS1420437 1863 - 0.342458
mod_2 TYPE III DNA MODIFICATION ENZYME (METHYLTRANSFERASE)SubName: Full=TYPE III DNA MODIFICATION ENZYME (METHYLTRANSFERASE); chromosome CDS1550288 1927 - 0.340944
mutS DNA MISMATCH REPAIR PROTEINRecName: Full=Endonuclease MutS2; EC=3.1.-.-; chromosome CDS627301 2289 - 0.387942
mutT putative DGTP PYROPHOSPHOHYDROLASERecName: Full=RNA pyrophosphohydrolase; EC=3.6.1.-; AltName: Full=(Di)nucleoside polyphosphate hydrolase; chromosome CDS1281413 474 + 0.417722
mutY A/G-SPECIFIC ADENINE GLYCOSYLASESubName: Full=A/G-SPECIFIC ADENINE GLYCOSYLASE; chromosome CDS146668 987 - 0.377913
nth ENDONUCLEASE IIIRecName: Full=Endonuclease III; EC=4.2.99.18; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase; chromosome CDS579028 645 - 0.420155
ogt METHYLATED-DNA--PROTEIN-CYSTEINEMETHYLTRANSFERASESubName: Full=METHYLATED-DNA--PROTEIN-CYSTEINE METHYLTRANSFERASE; chromosome CDS686875 507 - 0.372781
orf7 cag island proteinSubName: Full=Cag island protein; chromosome CDS510990 660 + 0.310606
pcrA putative ATP-DEPENDENT HELICASESubName: Full=Putative ATP-DEPENDENT HELICASE; chromosome CDS1592367 2841 + 0.380852
polA DNA POLYMERASE IRecName: Full=DNA polymerase I; Short=POL I; EC=2.7.7.7; chromosome CDS1492476 2694 - 0.390126
priA PRIMOSOMAL PROTEIN N' (REPLICATION FACTOR Y)RecName: Full=Primosomal protein N; EC=3.6.4.-; AltName: Full=ATP-dependent helicase PriA; chromosome CDS1104218 1860 - 0.393011
recA RECA PROTEIN.RecName: Full=Protein RecA; AltName: Full=Recombinase A; chromosome CDS156402 1044 + 0.443487
recG ATP-DEPENDENT DNA HELICASERecName: Full=ATP-dependent DNA helicase RecG; EC=3.6.4.12; chromosome CDS1552266 1872 - 0.381944
recJ putative SINGLE-STRANDED-DNA-SPECIFIC EXONUCLEASE RECJSubName: Full=Putative SINGLE-STRANDED-DNA-SPECIFIC EXONUCLEASE RECJ; chromosome CDS347685 1551 - 0.405545
recN DNA REPAIR PROTEIN(RECOMBINATION PROTEIN N)RecName: Full=DNA repair protein RecN; AltName: Full=Recombination protein N; chromosome CDS1581506 1569 + 0.393244
recR RECOMBINATION PROTEINRecName: Full=Recombination protein RecR; chromosome CDS954488 582 + 0.386598
rep putative ATP-DEPENDENT DNA HELICASESubName: Full=Putative ATP-DEPENDENT DNA HELICASE; chromosome CDS1501359 2046 - 0.40567
rnhA RIBONUCLEASE HIRecName: Full=Ribonuclease HI; Short=RNase HI; EC=3.1.26.4; chromosome CDS671961 432 + 0.418981
rnhB RIBONUCLEASE HIIRecName: Full=Ribonuclease HII; Short=RNase HII; EC=3.1.26.4; chromosome CDS1361044 630 - 0.428571
ruvA HOLLIDAY JUNCTION DNA HELICASERecName: Full=Holliday junction ATP-dependent DNA helicase RuvA; EC=3.6.4.12; chromosome CDS894351 552 - 0.42029
ruvB HOLLIDAY JUNCTION DNA HELICASE RUVBRecName: Full=Holliday junction ATP-dependent DNA helicase RuvB; EC=3.6.4.12; chromosome CDS394648 1011 - 0.419387
ruvC CROSSOVER JUNCTION ENDODEOXYRIBONUCLEASERecName: Full=Crossover junction endodeoxyribonuclease RuvC; EC=3.1.22.4; AltName: Full=Holliday junction nuclease RuvC; AltName: Full=Holliday junction resolvase RuvC; chromosome CDS891084 474 - 0.434599
ssb SINGLE-STRAND BINDING PROTEINRecName: Full=Single-stranded DNA-binding protein; Short=SSB; chromosome CDS1299583 546 - 0.43956
tnpA IS606 TRANSPOSASESubName: Full=IS606 TRANSPOSASE; chromosome CDS910322 195 + 0.435897
tnpB IS606 TRANSPOSASESubName: Full=IS606 TRANSPOSASE; chromosome CDS908966 1329 - 0.343868
topA_1 DNA TOPOISOMERASE IRecName: Full=DNA topoisomerase 1; EC=5.99.1.2; AltName: Full=DNA topoisomerase I; AltName: Full=Omega-protein; AltName: Full=Relaxing enzyme; AltName: Full=Swivelase; AltName: Full=Untwisting enzyme; chromosome CDS120641 2211 + 0.397105
topA_2 topoisomerase ISubName: Full=Topoisomerase I; chromosome CDS1016916 1278 + 0.327074
topA_3 topoisomerase ISubName: Full=Topoisomerase I; chromosome CDS1032846 2061 + 0.335759
ung URACIL-DNA GLYCOSYLASERecName: Full=Uracil-DNA glycosylase; Short=UDG; EC=3.2.2.27; chromosome CDS1383952 702 - 0.424501
uvrA EXCINUCLEASE ABC SUBUNIT A.RecName: Full=UvrABC system protein A; Short=UvrA protein; AltName: Full=Excinuclease ABC subunit A; chromosome CDS719545 2826 - 0.406582
uvrB EXCINUCLEASE ABC SUBUNIT BRecName: Full=UvrABC system protein B; Short=Protein UvrB; AltName: Full=Excinuclease ABC subunit B; chromosome CDS1154084 1977 - 0.410217
uvrC EXCINUCLEASE ABC SUBUNIT CRecName: Full=UvrABC system protein C; Short=Protein UvrC; AltName: Full=Excinuclease ABC subunit C; chromosome CDS837852 1785 + 0.377031
xseA EXODEOXYRIBONUCLEASE LARGE SUBUNITRecName: Full=Exodeoxyribonuclease 7 large subunit; EC=3.1.11.6; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit; chromosome CDS264979 1263 + 0.415677