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2024-05-01 19:35:23

Gene list

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COG category: Replication, recombination and repair
Organism: Helicobacter pylori J99, J99

Number of genes found: 104

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Helicobacter pylori J99, J99
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
M.HpyI TYPE II DNA MODIFICATION ENZYME (METHYLTRANSFERASE)chromosome CDS1263527 990 - 0.367677
cagH cag island proteinchromosome CDS536477 1113 - 0.412399
cagI cag island proteinchromosome CDS535321 1146 - 0.390925
cagS cag island proteinchromosome CDS529660 600 - 0.331667
deaD ATP-DEPENDENT RNA HELICASE DEADchromosome CDS252488 1476 + 0.428184
dnaA CHROMOSOMAL REPLICATION INITIATOR PROTEINchromosome CDS1557789 1374 - 0.400291
dnaB REPLICATIVE DNA HELICASEchromosome CDS1399639 1461 - 0.410678
dnaE DNA POLYMERASE III, ALPHA CHAINchromosome CDS1480574 3636 - 0.418317
dnaG DNA PRIMASEchromosome CDS10067 1680 + 0.392857
dnaN DNA POLYMERASE III, BETA CHAINchromosome CDS489047 1125 + 0.375111
dnaX DNA POLYMERASE III SUBUNITS GAMMA AND TAUchromosome CDS732907 1749 - 0.399085
exoA EXODEOXYRIBONUCLEASEchromosome CDS1555197 753 - 0.38247
gyrA DNA GYRASE SUBUNIT Achromosome CDS714771 2487 + 0.415762
gyrB DNA GYRASE SUBUNIT Bchromosome CDS490184 2322 + 0.40913
holB putative DNA poymerase III subunit delta'chromosome CDS1283633 657 + 0.378995
jhp0043 putative TYPE II DNA MODIFICATION ENZYME (METHYLTRANSFERASE)chromosome CDS49491 693 - 0.396825
jhp0044 putative TYPE II DNA MODIFICATION ENZYME (METHYLTRANSFERASE)chromosome CDS50161 558 - 0.38172
jhp0045 putative TYPE II DNA MODIFICATION ENZYME (METHYLTRANSFERASE)chromosome CDS51152 1032 - 0.325581
jhp0051 putativechromosome CDS60127 363 + 0.358127
jhp0057 putativechromosome CDS64483 261 + 0.402299
jhp0060 putativechromosome CDS66647 354 + 0.40678
jhp0085 TYPE II DNA MODIFICATION ENZYME (METHYLTRANSFERASE)chromosome CDS94286 834 + 0.394484
jhp0185 putativechromosome CDS201352 357 + 0.392157
jhp0227 putativechromosome CDS248871 285 - 0.364912
jhp0244 TYPE II DNA MODIFICATION ENZYME (METHYLTRANSFERASE)chromosome CDS266260 1173 - 0.31202
jhp0248 TYPE II DNA MODIFICATION ENZYME (METHYLTRANSFERASE)chromosome CDS268656 759 + 0.399209
jhp0316 putativechromosome CDS343351 801 + 0.414482
jhp0317 putativechromosome CDS344148 405 + 0.419753
jhp0336 putativechromosome CDS365433 2337 - 0.353445
jhp0398 putativechromosome CDS424501 1176 - 0.404762
jhp0402 putativechromosome CDS428582 867 - 0.381776
jhp0418 putativechromosome CDS450844 768 - 0.363281
jhp0433 putative TYPE II DNA MODIFICATION ENZYME (METHYLTRANSFERASE)chromosome CDS467389 930 + 0.351613
jhp0435 TYPE II DNA MODIFICATION ENZYME (METHYLTRANSFERASE)chromosome CDS469030 1056 + 0.382576
jhp0441 putativechromosome CDS478667 546 + 0.377289
jhp0457 putativechromosome CDS495720 639 + 0.363067
jhp0549 ENDONUCLEASE IIIchromosome CDS599604 657 + 0.347032
jhp0595 putativechromosome CDS658536 630 + 0.392063
jhp0609 putativechromosome CDS674254 516 + 0.337209
jhp0617 INTEGRASE-RECOMBINASE PROTEIN (XERCD FAMILY)chromosome CDS685741 1071 + 0.379085
jhp0628 putativechromosome CDS699704 831 + 0.380265
jhp0629 putative TYPE II DNA MODIFICATION ENZYME (METHYLTRANSFERASE)chromosome CDS700587 1215 + 0.316049
jhp0657 putativechromosome CDS735622 423 + 0.404255
jhp0718 putativechromosome CDS797664 1290 + 0.372093
jhp0746 putativechromosome CDS826848 603 - 0.368159
jhp0756 putative TYPE II DNA MODIFICATION ENZYME (METHYLTRANSFERASE)chromosome CDS833787 819 - 0.333333
jhp0762 putativechromosome CDS840912 345 + 0.336232
jhp0774 DNA-BINDING PROTEIN HUchromosome CDS852229 285 + 0.403509
jhp0802 putativechromosome CDS880898 462 - 0.348485
jhp0832 putativechromosome CDS912007 288 - 0.336806
jhp0847 putative ATP-DEPENDENT HELICASEchromosome CDS928330 2031 + 0.400788
jhp0896 putativechromosome CDS989179 693 - 0.341991
jhp0926 putativechromosome CDS1022556 1017 - 0.347099
jhp0928 putativechromosome CDS1025324 6696 + 0.377091
jhp0941 INTEGRASE/RECOMBINASE (XERCD FAMILY)chromosome CDS1043684 996 - 0.319277
jhp0951 INTEGRASE/RECOMBINASE (XERCD FAMILY)chromosome CDS1055965 1074 - 0.318436
jhp1042 putativechromosome CDS1156109 804 - 0.369403
jhp1044 putativechromosome CDS1157436 3465 - 0.371429
jhp1048 putativechromosome CDS1166046 435 - 0.363218
jhp1050 TYPE II DNA MODIFICATION ENZYME (METHYLTRANSFERASE)chromosome CDS1167304 966 - 0.365424
jhp1168 putativechromosome CDS1300700 1023 - 0.368524
jhp1271 TYPE II DNA MODIFICATION ENZYME (METHYLTRANSFERASE)chromosome CDS1388981 1080 - 0.330556
jhp1284 TYPE II DNA MODIFICATION ENZYME (METHYLTRANSFERASE)chromosome CDS1404425 1950 + 0.353846
jhp1303 putativechromosome CDS1433171 1233 + 0.352798
jhp1304 putativechromosome CDS1434471 930 + 0.365591
jhp1375 putativechromosome CDS1507988 261 - 0.363985
jhp1392 putativechromosome CDS1523537 921 + 0.313789
jhp1438 DNA POLYMERASE IIIchromosome CDS1585662 972 - 0.408436
jhp1481 putativechromosome CDS1629946 765 - 0.398693
lig DNA LIGASEchromosome CDS618855 1971 - 0.403349
mfd TRANSCRIPTION-REPAIR COUPLING FACTORchromosome CDS1606102 3006 + 0.401198
mod_1 putative TYPE III DNA MODIFICATION ENZYME (METHYLTRANSFERASE)chromosome CDS1420437 1863 - 0.342458
mod_2 TYPE III DNA MODIFICATION ENZYME (METHYLTRANSFERASE)chromosome CDS1550288 1927 - 0.340944
mutS DNA MISMATCH REPAIR PROTEINchromosome CDS627301 2289 - 0.387942
mutT putative DGTP PYROPHOSPHOHYDROLASEchromosome CDS1281413 474 + 0.417722
mutY A/G-SPECIFIC ADENINE GLYCOSYLASEchromosome CDS146668 987 - 0.377913
nth ENDONUCLEASE IIIchromosome CDS579028 645 - 0.420155
ogt METHYLATED-DNA--PROTEIN-CYSTEINEMETHYLTRANSFERASEchromosome CDS686875 507 - 0.372781
orf7 cag island proteinchromosome CDS510990 660 + 0.310606
pcrA putative ATP-DEPENDENT HELICASEchromosome CDS1592367 2841 + 0.380852
polA DNA POLYMERASE Ichromosome CDS1492476 2694 - 0.390126
priA PRIMOSOMAL PROTEIN N' (REPLICATION FACTOR Y)chromosome CDS1104218 1860 - 0.393011
recA RECA PROTEIN.chromosome CDS156402 1044 + 0.443487
recG ATP-DEPENDENT DNA HELICASEchromosome CDS1552266 1872 - 0.381944
recJ putative SINGLE-STRANDED-DNA-SPECIFIC EXONUCLEASE RECJchromosome CDS347685 1551 - 0.405545
recN DNA REPAIR PROTEIN(RECOMBINATION PROTEIN N)chromosome CDS1581506 1569 + 0.393244
recR RECOMBINATION PROTEINchromosome CDS954488 582 + 0.386598
rep putative ATP-DEPENDENT DNA HELICASEchromosome CDS1501359 2046 - 0.40567
rnhA RIBONUCLEASE HIchromosome CDS671961 432 + 0.418981
rnhB RIBONUCLEASE HIIchromosome CDS1361044 630 - 0.428571
ruvA HOLLIDAY JUNCTION DNA HELICASEchromosome CDS894351 552 - 0.42029
ruvB HOLLIDAY JUNCTION DNA HELICASE RUVBchromosome CDS394648 1011 - 0.419387
ruvC CROSSOVER JUNCTION ENDODEOXYRIBONUCLEASEchromosome CDS891084 474 - 0.434599
ssb SINGLE-STRAND BINDING PROTEINchromosome CDS1299583 546 - 0.43956
tnpA IS606 TRANSPOSASEchromosome CDS910322 195 + 0.435897
tnpB IS606 TRANSPOSASEchromosome CDS908966 1329 - 0.343868
topA_1 DNA TOPOISOMERASE Ichromosome CDS120641 2211 + 0.397105
topA_2 topoisomerase Ichromosome CDS1016916 1278 + 0.327074
topA_3 topoisomerase Ichromosome CDS1032846 2061 + 0.335759
ung URACIL-DNA GLYCOSYLASEchromosome CDS1383952 702 - 0.424501
uvrA EXCINUCLEASE ABC SUBUNIT A.chromosome CDS719545 2826 - 0.406582
uvrB EXCINUCLEASE ABC SUBUNIT Bchromosome CDS1154084 1977 - 0.410217
uvrC EXCINUCLEASE ABC SUBUNIT Cchromosome CDS837852 1785 + 0.377031
xseA EXODEOXYRIBONUCLEASE LARGE SUBUNITchromosome CDS264979 1263 + 0.415677