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2024-05-18 08:44:43

Gene list

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COG category: Replication, recombination and repair
Organism: Francisella tularensis subsp. tularensis SCHU S4, SCHU S4

Number of genes found: 151

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Francisella tularensis subsp. tularensis SCHU S4, SCHU S4
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA FTT0825c hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS841268 336 - 0.369048
NA FTT1443c ATPase, AAA familySubName: Full=ATPase, AAA family; chromosome CDS1489852 903 - 0.357697
NA FTT1439c DeoxyribonucleaseSubName: Full=Deoxyribonuclease; EC=3.1.21.-; chromosome CDS1485272 768 - 0.334635
NA FTT1701 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1779042 378 + 0.23545
NA FTT0359 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS359414 471 + 0.312102
NA FTT0666c Methylpurine-DNA glycosylase family proteinRecName: Full=Putative 3-methyladenine DNA glycosylase; EC=3.2.2.-; chromosome CDS684011 582 - 0.295533
NA FTT0846 deoxyribodipyrimidine photolyaseSubName: Full=Deoxyribodipyrimidine photolyase; EC=4.1.99.3; chromosome CDS859134 1500 + 0.342667
NA FTT0859c hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS870755 324 - 0.283951
NA FTT1539c conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1601863 1431 - 0.359189
NA FTT1303c hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1325940 876 - 0.307078
NA FTT0768c hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS787128 1029 - 0.297376
NA FTT0586 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS605903 579 + 0.305699
NA FTT1525c hypothetical membrane proteinSubName: Full=Hypothetical membrane protein; chromosome CDS1581783 888 - 0.286036
NA FTT0305 MutT/nudix family proteinSubName: Full=MutT/nudix family protein; EC=3.6.1.-; chromosome CDS319466 378 + 0.362434
NA FTT0525 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS547484 657 + 0.25723
NA FTT0136 HelicaseSubName: Full=Helicase; chromosome CDS148165 1416 + 0.336158
NA FTT1175c hypothetical membrane proteinSubName: Full=Hypothetical membrane protein; chromosome CDS1189244 639 - 0.255086
NA FTT1348 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1386587 1731 + 0.242634
NA FTT1581c EndonucleaseSubName: Full=Endonuclease; chromosome CDS1646234 285 - 0.291228
NA FTT0913 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS920785 468 + 0.307692
NA FTT1346 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1385698 378 + 0.23545
NA FTT0903 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS911142 504 + 0.323413
NA FTT1791 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1878359 363 + 0.305785
NA FTT0886 DNA repair protein recNRecName: Full=DNA repair protein RecN; AltName: Full=Recombination protein N; chromosome CDS894174 1650 + 0.359394
NA FTT1703 conserved hypothetical protein.SubName: Full=Uncharacterized protein; chromosome CDS1779931 1731 + 0.242634
NA FTT0986 conserved hypothetical proteinRecName: Full=Putative Holliday junction resolvase; EC=3.1.-.-; chromosome CDS995822 411 + 0.350365
NA FTT1323 MethylaseRecName: Full=Ribosomal RNA small subunit methyltransferase D; EC=2.1.1.171; chromosome CDS1350607 579 + 0.295337
NA FTT0244 DNA/RNA helicaseSubName: Full=DNA/RNA helicase; EC=3.6.1.-; chromosome CDS255556 2742 + 0.314004
NA FTT1492c hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1545263 627 - 0.279107
NA FTT0898c conserved hypothetical proteinRecName: Full=UPF0102 protein FTT_0898c; chromosome CDS906970 354 - 0.319209
deaD FTT1471c Cold-shock DEAD-box protein ARecName: Full=ATP-dependent RNA helicase DeaD; EC=3.6.4.13; AltName: Full=Cold-shock DEAD box protein A; chromosome CDS1522498 1710 - 0.346784
dnaA FTT0001 chromosomal replication initiator protein dnaARecName: Full=Chromosomal replication initiator protein DnaA; chromosome CDS1 1521 + 0.309007
dnaB FTT1059c Replicative DNA helicaseSubName: Full=Replicative DNA helicase; EC=3.6.1.-; chromosome CDS1068127 1398 - 0.351931
dnaE FTT0402 DNA polymerase III alpha subunitSubName: Full=DNA polymerase III alpha subunit; EC=2.7.7.7; chromosome CDS404586 3480 + 0.356897
dnaG FTT1036c DNA primaseRecName: Full=DNA primase; EC=2.7.7.-; chromosome CDS1048195 1818 - 0.309131
dnaN FTT0002 DNA polymerase III, beta chainRecName: Full=DNA polymerase III subunit beta; EC=2.7.7.7; chromosome CDS1558 1104 + 0.278986
dnaQ FTT0548 DNA polymerase III, epsilon subunitSubName: Full=DNA polymerase III, epsilon subunit; EC=2.7.7.7; chromosome CDS566859 693 + 0.311688
dnaX FTT0190c DNA polymerase III, gamma/tau subunitsSubName: Full=DNA polymerase III, gamma/tau subunits; EC=2.7.7.7; chromosome CDS205790 1641 - 0.327239
gyrA FTT1575c DNA gyrase, subunit ARecName: Full=DNA gyrase subunit A; EC=5.99.1.3; chromosome CDS1637300 2607 - 0.35443
gyrB FTT0510 DNA gyrase subunit BRecName: Full=DNA gyrase subunit B; EC=5.99.1.3; chromosome CDS530402 2418 + 0.346567
holA FTT0197c DNA polymerase III, delta subunitSubName: Full=DNA polymerase III, delta subunit; EC=2.7.7.7; chromosome CDS215230 978 - 0.308793
holB FTT0460 DNA polymerase III, delta prime subunitSubName: Full=DNA polymerase III, delta prime subunit; EC=2.7.7.7; chromosome CDS477191 912 + 0.292763
holC FTT0298 DNA polymerase III (CHI subunit) proteinSubName: Full=DNA polymerase III (CHI subunit) protein; EC=2.7.7.7; chromosome CDS311817 441 + 0.31746
hrpA FTT1524c ATp-dependent helicaseSubName: Full=ATp-dependent helicase; EC=3.-.-.-; chromosome CDS1577491 4269 - 0.330522
hupB FTT0627 Histone-like protein HU form BSubName: Full=Histone-like protein HU form B; chromosome CDS647058 273 + 0.3663
isftu1 FTT1548 TransposaseSubName: Full=Transposase; chromosome CDS1609829 785 + 0.323567
isftu1 FTT0216 TransposaseSubName: Full=Transposase; chromosome CDS234258 785 + 0.323567
isftu1 FTT0352 TransposaseSubName: Full=Transposase; chromosome CDS351206 785 + 0.323567
isftu1 FTT1620 Transposase chromosome CDS1683483 785 + 0.322293
isftu1 FTT1615 TransposaseSubName: Full=Transposase; chromosome CDS1678234 785 + 0.323567
isftu1 FTT0513c TransposaseSubName: Full=Transposase; chromosome CDS534458 785 - 0.323567
isftu1 FTT0226c TransposaseSubName: Full=Transposase; chromosome CDS242739 785 - 0.323567
isftu1 FTT0440c TransposaseSubName: Full=Transposase; chromosome CDS453350 785 - 0.323567
isftu1 FTT0765 TransposaseSubName: Full=Transposase; chromosome CDS785003 785 + 0.323567
isftu1 FTT0253c TransposaseSubName: Full=Transposase; chromosome CDS269466 785 - 0.323567
isftu1 FTT1756c TransposaseSubName: Full=Transposase; chromosome CDS1844792 785 - 0.323567
isftu1 FTT1669 TransposaseSubName: Full=Transposase; chromosome CDS1738767 785 + 0.324841
isftu1 FTT1427 TransposaseSubName: Full=Transposase; chromosome CDS1476057 785 + 0.323567
isftu1 FTT0377 TransposaseSubName: Full=Transposase; chromosome CDS378907 785 + 0.323567
isftu1 FTT1363c TransposaseSubName: Full=Transposase; chromosome CDS1407431 785 - 0.323567
isftu1 FTT1780 TransposaseSubName: Full=Transposase; chromosome CDS1868850 785 + 0.323567
isftu1 FTT0779 TransposaseSubName: Full=Transposase; chromosome CDS799236 785 + 0.323567
isftu1 FTT1718c TransposaseSubName: Full=Transposase; chromosome CDS1800775 785 - 0.323567
isftu1 FTT1232 TransposaseSubName: Full=Transposase; chromosome CDS1250511 785 + 0.323567
isftu1 FTT0722c TransposaseSubName: Full=Transposase; chromosome CDS744290 785 - 0.323567
isftu1 FTT0355c TransposaseSubName: Full=Transposase; chromosome CDS354206 785 - 0.323567
isftu1 FTT1065c TransposaseSubName: Full=Transposase; chromosome CDS1073413 785 - 0.323567
isftu1 FTT1142c TransposaseSubName: Full=Transposase; chromosome CDS1153902 785 - 0.323567
isftu1 FTT1265c TransposaseSubName: Full=Transposase; chromosome CDS1286996 785 - 0.323567
isftu1 FTT0692c TransposaseSubName: Full=Transposase; chromosome CDS710738 785 - 0.323567
isftu1 FTT1074 TransposaseSubName: Full=Transposase; chromosome CDS1085437 785 + 0.323567
isftu1 FTT0273 TransposaseSubName: Full=Transposase; chromosome CDS287567 785 + 0.323567
isftu1 FTT0363 TransposaseSubName: Full=Transposase; chromosome CDS363515 785 + 0.323567
isftu1 FTT0171 TransposaseSubName: Full=Transposase; chromosome CDS185991 785 + 0.323567
isftu1 FTT0920 TransposaseSubName: Full=Transposase; chromosome CDS930937 785 + 0.323567
isftu1 FTT0004c TransposaseSubName: Full=Transposase; chromosome CDS3204 785 - 0.323567
isftu1 FTT1584c TransposaseSubName: Full=Transposase; chromosome CDS1648874 785 - 0.323567
isftu1 FTT1386 TransposaseSubName: Full=Transposase; chromosome CDS1429994 785 + 0.323567
isftu1 FTT0822 TransposaseSubName: Full=Transposase; chromosome CDS839218 785 + 0.323567
isftu1 FTT1697c Transposase chromosome CDS1766156 785 - 0.324841
isftu1 FTT1742c TransposaseSubName: Full=Transposase; chromosome CDS1831894 785 - 0.323567
isftu1 FTT1692 Transposase chromosome CDS1760964 785 + 0.323567
isftu1 FTT1262 TransposaseSubName: Full=Transposase; chromosome CDS1283996 785 + 0.323567
isftu1 FTT0247 TransposaseSubName: Full=Transposase; chromosome CDS259569 785 + 0.323567
isftu1 FTT0357c TransposaseSubName: Full=Transposase; chromosome CDS357362 785 - 0.323567
isftu1 FTT1481c TransposaseSubName: Full=Transposase; chromosome CDS1531763 785 - 0.324841
isftu1 FTT1599c TransposaseSubName: Full=Transposase; chromosome CDS1665164 785 - 0.323567
isftu1 FTT0131c TransposaseSubName: Full=Transposase; chromosome CDS143567 785 - 0.323567
isftu1 FTT0098c TransposaseSubName: Full=Transposase; chromosome CDS102215 785 - 0.323567
isftu1 FTT0561 TransposaseSubName: Full=Transposase; chromosome CDS578377 785 + 0.323567
isftu1 FTT1210c TransposaseSubName: Full=Transposase; chromosome CDS1229940 785 - 0.323567
isftu2 FTT0202c TransposaseSubName: Full=Transposase; chromosome CDS218947 744 - 0.290323
isftu2 FTT0730 TransposaseSubName: Full=Transposase; chromosome CDS753265 744 + 0.290323
isftu2 FTT0867 TransposaseSubName: Full=Transposase; chromosome CDS876766 744 + 0.290323
isftu2 FTT0381 TransposaseSubName: Full=Transposase; chromosome CDS383703 744 + 0.290323
isftu2 FTT1340c TransposaseSubName: Full=Transposase; chromosome CDS1370480 744 - 0.290323
isftu2 FTT1523c TransposaseSubName: Full=Transposase; chromosome CDS1576266 744 - 0.290323
isftu2 FTT1465c TransposaseSubName: Full=Transposase; chromosome CDS1516553 744 - 0.290323
isftu2 FTT1436 TransposaseSubName: Full=Transposase; chromosome CDS1483250 744 + 0.290323
isftu2 FTT0099 TransposaseSubName: Full=Transposase; chromosome CDS103101 744 + 0.290323
isftu2 FTT0309c TransposaseSubName: Full=Transposase; chromosome CDS323935 744 - 0.290323
isftu2 FTT0587c TransposaseSubName: Full=Transposase; chromosome CDS606905 744 - 0.290323
isftu2 FTT1111 TransposaseSubName: Full=Transposase; chromosome CDS1121518 744 + 0.290323
isftu2 FTT0565c TransposaseSubName: Full=Transposase; chromosome CDS582509 744 - 0.290323
ligN FTT1387c DNA ligaseRecName: Full=DNA ligase; EC=6.5.1.2; AltName: Full=Polydeoxyribonucleotide synthase [NAD(+)]; chromosome CDS1431224 2037 - 0.353952
mfd FTT0644c Transcription-repair coupling factor,ATP-dependentRecName: Full=Transcription-repair-coupling factor; Short=TRCF; EC=3.6.4.-; chromosome CDS663035 3426 - 0.304729
mutL FTT0486 DNA mismatch repair proteinRecName: Full=DNA mismatch repair protein MutL; chromosome CDS504863 1803 + 0.344981
mutM FTT0693c Formamidopyrimidine-DNA glycosylaseRecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; EC=3.2.2.23; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase MutM; Short=AP lyase MutM; EC=4.2.99.18; chromosome CDS711593 825 - 0.295758
mutT FTT0984c Mutator proteinSubName: Full=Mutator protein; EC=3.6.1.-; chromosome CDS994787 411 - 0.274939
muts FTT1499 DNA mismatch repair protein MutSRecName: Full=DNA mismatch repair protein MutS; chromosome CDS1552228 2574 + 0.332168
nth FTT0648c Endonuclease IIIRecName: Full=Endonuclease III; EC=4.2.99.18; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase; chromosome CDS668994 639 - 0.334898
nudH FTT0160 (Di)nucleoside polyphosphate hydrolaseRecName: Full=RNA pyrophosphohydrolase; EC=3.6.1.-; AltName: Full=(Di)nucleoside polyphosphate hydrolase; chromosome CDS175200 468 + 0.363248
ogt FTT1518 Methylated-DNA--protein-cysteinemethyltransferaseSubName: Full=Methylated-DNA--protein-cysteine methyltransferase; EC=2.1.1.63; chromosome CDS1571663 573 + 0.314136
parC FTT0396 DNA topoisomerase IV subunit ARecName: Full=DNA topoisomerase 4 subunit A; EC=5.99.1.3; AltName: Full=Topoisomerase IV subunit A; chromosome CDS396434 2226 + 0.336029
parE FTT0163c Topoisomerase IV, subunit BRecName: Full=DNA topoisomerase 4 subunit B; EC=5.99.1.3; AltName: Full=Topoisomerase IV subunit B; chromosome CDS176959 1884 - 0.345541
pdpA FTT1344 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1379960 2463 + 0.270808
pdpA1 FTT1699 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1773304 2463 + 0.270808
pdpB FTT1345 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1382427 3282 + 0.263559
pdpB1 FTT1700 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1775771 3282 + 0.263559
polA FTT0111 DNA polymerase IRecName: Full=DNA polymerase; EC=2.7.7.7; chromosome CDS118323 2694 + 0.350037
priA FTT0215 Primosomal protein N'SubName: Full=Primosomal protein N; chromosome CDS231975 2154 + 0.324977
rdgC FTT1084c recombination associated proteinSubName: Full=Recombination associated protein; chromosome CDS1092793 861 - 0.297329
recA FTT1750 Recombinase A proteinRecName: Full=Protein RecA; AltName: Full=Recombinase A; chromosome CDS1838251 1080 + 0.381481
recB FTT1394c Exodeoxyribonuclease V beta chainSubName: Full=Exodeoxyribonuclease V beta chain; EC=3.1.11.5; chromosome CDS1438798 3654 - 0.321839
recC FTT1397c Exodeoxyribonuclease V gamma chainSubName: Full=Exodeoxyribonuclease V gamma chain; EC=3.1.11.5; chromosome CDS1444610 3240 - 0.317284
recD FTT1393c Exodeoxyribonuclease V, alpha subunitSubName: Full=Exodeoxyribonuclease V, alpha subunit; EC=3.1.11.5; chromosome CDS1436964 1869 - 0.313537
recF FTT0762c DNA replication and repair protein recFRecName: Full=DNA replication and repair protein RecF; chromosome CDS780787 1050 - 0.26381
recG FTT1601c ATP-dependent DNA helicase RecGSubName: Full=ATP-dependent DNA helicase RecG; EC=3.6.1.-; chromosome CDS1668702 2040 - 0.342647
recJ FTT0478c Single-stranded-DNA-specific exonucleaseSubName: Full=Single-stranded-DNA-specific exonuclease; EC=3.1.-.-; chromosome CDS495460 1743 - 0.328744
recO FTT1224c DNA repair protein recOSubName: Full=DNA repair protein recO; chromosome CDS1241206 699 - 0.283262
recR FTT0809c Recombination protein recRRecName: Full=Recombination protein RecR; chromosome CDS829948 603 - 0.328358
rep FTT1087c ATP-dependent DNA helicaseSubName: Full=ATP-dependent DNA helicase; EC=3.6.1.-; chromosome CDS1095850 2016 - 0.31498
rhlE FTT0952 ATP-dependent RNA helicase RhlESubName: Full=ATP-dependent RNA helicase RhlE; chromosome CDS964146 1326 + 0.323529
rnhA FTT0590 Ribonuclease HRecName: Full=Ribonuclease H; Short=RNase H; EC=3.1.26.4; chromosome CDS609632 483 + 0.376812
rnhB FTT1278c Ribonuclease HIIRecName: Full=Ribonuclease HII; Short=RNase HII; EC=3.1.26.4; chromosome CDS1299107 564 - 0.319149
ruvA FTT0658 holliday junction DNA helicase, subunit ARecName: Full=Holliday junction ATP-dependent DNA helicase RuvA; EC=3.6.4.12; chromosome CDS677568 654 + 0.330275
ruvB FTT1013c holliday junction DNA helicase, subunit BRecName: Full=Holliday junction ATP-dependent DNA helicase RuvB; EC=3.6.4.12; chromosome CDS1023159 1047 - 0.372493
ruvC FTT0656 holliday junction endodeoxyribonucleaseRecName: Full=Crossover junction endodeoxyribonuclease RuvC; EC=3.1.22.4; AltName: Full=Holliday junction nuclease RuvC; AltName: Full=Holliday junction resolvase RuvC; chromosome CDS675747 537 + 0.363128
sbcB FTT1200c Exodeoxyribonuclease IRecName: Full=Exodeoxyribonuclease I; EC=3.1.11.1; chromosome CDS1218072 1449 - 0.329193
ssb FTT1752 Single-strand binding proteinRecName: Full=Single-stranded DNA-binding protein; chromosome CDS1839942 477 + 0.343816
topA FTT0906c DNA topoisomerase IRecName: Full=DNA topoisomerase 1; EC=5.99.1.2; AltName: Full=DNA topoisomerase I; chromosome CDS913714 2295 - 0.345098
ung FTT1578c Uracil-DNA glycosylaseRecName: Full=Uracil-DNA glycosylase; Short=UDG; EC=3.2.2.27; chromosome CDS1641866 663 - 0.333333
uvrA FTT1312c DNA excision repair enzyme, subunit A (UvrABC system protein A), ABC transporter, ATP-binding proteinRecName: Full=UvrABC system protein A; Short=UvrA protein; AltName: Full=Excinuclease ABC subunit A; chromosome CDS1336516 2823 - 0.357775
uvrB FTT1199c DNA excision repair enzyme, subunit B (UvrABC system protein B)RecName: Full=UvrABC system protein B; Short=Protein UvrB; AltName: Full=Excinuclease ABC subunit B; chromosome CDS1216064 2007 - 0.358246
uvrC FTT0777 DNA excision repair enzyme, subunit C (UvrABC system protein A)RecName: Full=UvrABC system protein C; Short=Protein UvrC; AltName: Full=Excinuclease ABC subunit C; chromosome CDS796879 1839 + 0.339859
uvrD FTT0121 DNA helicase IISubName: Full=DNA helicase II; EC=3.6.1.-; chromosome CDS130986 2223 + 0.334233
xerC FTT1503 Integrase/recombinase XerCRecName: Full=Tyrosine recombinase XerC; chromosome CDS1557984 879 + 0.324232
xerD FTT0154 Integrase/recombinaseRecName: Full=Tyrosine recombinase XerD; chromosome CDS170083 879 + 0.351536
xseA FTT1190c Exodeoxyribonuclease VII large subunitSubName: Full=Exodeoxyribonuclease VII large subunit; EC=3.1.11.6; chromosome CDS1205948 1386 - 0.307359
xthA FTT0959c Exodeoxyribonuclease IIISubName: Full=Exodeoxyribonuclease III; EC=3.1.11.2; chromosome CDS970830 789 - 0.340938
yjjV FTT0763c TatD related DNAse family proteinSubName: Full=TatD related DNAse family protein; EC=3.1.21.-; chromosome CDS781840 747 - 0.269076