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2024-05-15 05:17:53

Gene list

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COG category: Replication, recombination and repair
Organism: Ureaplasma parvum serovar 3 str. ATCC 700970, ATCC 700970

Number of genes found: 77

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Ureaplasma parvum serovar 3 str. ATCC 700970, ATCC 700970
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA UU476 unique hypothetical ATP/GTP-binding proteinSubName: Full=Unique hypothetical ATP/GTP-binding protein; chromosome CDS546042 2478 - 0.224375
NA UU328 unique hypotheticalSubName: Full=Unique hypothetical; chromosome CDS373678 945 + 0.180952
NA UU308 conserved hypotheticalSubName: Full=Conserved hypothetical; chromosome CDS352983 1146 - 0.178883
NA UU440 unique hypothetical membrane lipoproteinSubName: Full=Unique hypothetical membrane lipoprotein; chromosome CDS500313 1500 - 0.199333
NA UU455 unique hypotheticalSubName: Full=Unique hypothetical; chromosome CDS515969 3399 + 0.223595
NA UU571 conserved hypothetical ATP/GTP-binding proteinSubName: Full=Conserved hypothetical ATP/GTP-binding protein; chromosome CDS711892 4104 - 0.258041
NA UU043 conserved hypothetical membrane lipoproteinSubName: Full=Conserved hypothetical membrane lipoprotein; chromosome CDS45312 2517 + 0.283671
NA UU475 unique hypotheticalSubName: Full=Unique hypothetical; chromosome CDS544036 1851 - 0.210697
NA UU293 unique hypotheticalSubName: Full=Unique hypothetical; chromosome CDS333303 4344 + 0.221225
NA UU224 unique hypothetical membrane lipoproteinSubName: Full=Unique hypothetical membrane lipoprotein; chromosome CDS270506 1149 + 0.224543
NA UU419 conserved hypotheticalSubName: Full=Conserved hypothetical; chromosome CDS483330 867 - 0.260669
NA UU194 conserved hypotheticalRecName: Full=Ribonuclease M5; EC=3.1.26.8; AltName: Full=RNase M5; AltName: Full=Ribosomal RNA terminal maturase M5; chromosome CDS237179 540 + 0.212963
NA UU437 conserved hypotheticalRecName: Full=DNA polymerase IV; Short=Pol IV; EC=2.7.7.7; chromosome CDS498470 1056 + 0.215909
NA UU443 unique hypothetical membrane lipoproteinSubName: Full=Unique hypothetical membrane lipoprotein; chromosome CDS504656 1887 - 0.198198
NA UU167 unique hypotheticalRecName: Full=Uncharacterized protein UU167; chromosome CDS205362 360 - 0.255556
NA UU370 conserved hypotheticalRecName: Full=Putative Holliday junction resolvase; EC=3.1.-.-; chromosome CDS422797 444 + 0.245495
NA UU451 unique hypotheticalSubName: Full=Unique hypothetical; chromosome CDS511550 1017 - 0.265487
NA UU196 conserved hypothetical ATP/GTP-binding proteinSubName: Full=Conserved hypothetical ATP/GTP-binding protein; chromosome CDS238563 1227 + 0.265689
NA UU574 conserved hypotheticalSubName: Full=Conserved hypothetical; chromosome CDS719316 918 - 0.214597
NA UU388 unique hypotheticalSubName: Full=Unique hypothetical; chromosome CDS445807 876 + 0.227169
NA UU259 unique hypotheticalSubName: Full=Unique hypothetical; chromosome CDS291356 1866 + 0.198285
NA UU389 conserved hypothetical ATP/GTP-binding proteinSubName: Full=Conserved hypothetical ATP/GTP-binding protein; chromosome CDS446687 3855 + 0.217899
NA UU408 unique hypotheticalSubName: Full=Unique hypothetical; chromosome CDS469722 450 - 0.222222
NA UU542 unique hypotheticalSubName: Full=Unique hypothetical; chromosome CDS670982 2427 + 0.226205
NA UU271 unique hypotheticalSubName: Full=Unique hypothetical; chromosome CDS306447 1374 + 0.184134
NA UU017 hypotheticalRecName: Full=Uncharacterized deoxyribonuclease UU017; EC=3.1.21.-; chromosome CDS17555 798 - 0.26817
NA UU307 conserved hypothetical ATP/GTP-binding proteinSubName: Full=Conserved hypothetical ATP/GTP-binding protein; chromosome CDS352030 951 - 0.202944
NA UU591 unique hypotheticalSubName: Full=Unique hypothetical; chromosome CDS740263 720 - 0.231944
NA UU152 unique hypotheticalRecName: Full=Uncharacterized protein UU152; chromosome CDS191566 264 + 0.265152
NA UU335 unique hypotheticalSubName: Full=Unique hypothetical; chromosome CDS379425 2043 + 0.240333
NA UU492 conserved hypotheticalSubName: Full=Conserved hypothetical; chromosome CDS589796 717 + 0.230126
NA UU336 unique hypotheticalSubName: Full=Unique hypothetical; chromosome CDS381491 1308 + 0.217125
NA UU068 conserved hypotheticalSubName: Full=Conserved hypothetical; chromosome CDS83725 657 - 0.266362
NA UU165 unique hypotheticalRecName: Full=Uncharacterized protein UU165; chromosome CDS201180 327 - 0.256881
NA UU143 conserved hypotheticalSubName: Full=Conserved hypothetical; chromosome CDS184037 3819 - 0.232522
NA UU422 unique hypotheticalSubName: Full=Unique hypothetical; chromosome CDS486107 504 + 0.162698
ABCsbp-3 UU028 putative ABC substrate-binding protein-ironSubName: Full=Putative ABC substrate-binding protein-iron; chromosome CDS29014 747 - 0.232932
codV UU529 integrase-recombinase proteinSubName: Full=Integrase-recombinase protein; chromosome CDS657864 756 + 0.194444
dcm UU528 cytosine-specific methyltransferaseRecName: Full=Cytosine-specific methyltransferase; EC=2.1.1.37; chromosome CDS656402 900 - 0.277778
deaD UU582 ATP-dependent RNA helicaseSubName: Full=ATP-dependent RNA helicase; chromosome CDS727817 1332 - 0.261261
dnaA UU001 chromosomal replication initiator proteinRecName: Full=Chromosomal replication initiator protein DnaA; chromosome CDS1 1374 + 0.246725
dnaB UU550 replicative DNA helicaseSubName: Full=Replicative DNA helicase; chromosome CDS684427 1461 - 0.268994
dnaE UU415 DNA polymerase III alpha chain 2RecName: Full=DNA polymerase III subunit alpha; EC=2.7.7.7; chromosome CDS477991 2910 - 0.243299
dnaG UU494 DNA primaseRecName: Full=DNA primase; EC=2.7.7.-; chromosome CDS591955 1926 + 0.220665
dnaH UU019 DNA polymerase III delta subunitSubName: Full=DNA polymerase III delta subunit; chromosome CDS19673 795 - 0.2
dnaN UU079 DNA pol III beta chainSubName: Full=DNA pol III beta chain; chromosome CDS95588 1140 + 0.235965
dnaX UU087 DNA polymerase III gamma-tau subunitsSubName: Full=DNA polymerase III gamma-tau subunit; chromosome CDS105760 1794 + 0.226867
fpg UU413 formamidopyrimidine-DNA glycosylaseRecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; EC=3.2.2.23; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase MutM; Short=AP lyase MutM; EC=4.2.99.18; chromosome CDS476249 828 - 0.258454
gyrA UU082 DNA topoisomerase chain A-DNA gyrase A subunitRecName: Full=DNA gyrase subunit A; EC=5.99.1.3; chromosome CDS99069 2523 + 0.297265
gyrB UU081 DNA topoisomerase-DNA gyrase subunit BRecName: Full=DNA gyrase subunit B; EC=5.99.1.3; chromosome CDS97095 1953 + 0.30722
hupA UU282 DNA-binding protein Hu-alpha (HU-2)RecName: Full=DNA-binding protein HU; chromosome CDS317402 393 + 0.277354
lig UU121 DNA ligaseRecName: Full=DNA ligase; EC=6.5.1.2; AltName: Full=Polydeoxyribonucleotide synthase [NAD(+)]; chromosome CDS159495 2022 + 0.260138
mnuA-1 UU055 membrane nuclease A-hypotheticalSubName: Full=Membrane nuclease A-hypothetical; chromosome CDS66507 3417 + 0.251683
mod UU477 adenine specific DNA methyltransferaseSubName: Full=Adenine specific DNA methyltransferase; chromosome CDS548525 1083 - 0.235457
nfo UU306 endonuclease IVRecName: Full=Probable endonuclease 4; EC=3.1.21.2; AltName: Full=Endodeoxyribonuclease IV; AltName: Full=Endonuclease IV; chromosome CDS350885 912 + 0.269737
parC/gyrA UU467 topoisomerase IV subunit ASubName: Full=Topoisomerase IV subunit A; chromosome CDS531447 2553 + 0.264395
parE/gyrB UU466 topoisomerase IV subunit BSubName: Full=Topoisomerase IV subunit B; chromosome CDS529513 1929 + 0.283567
pkn UU216 serine/threonine kinaseSubName: Full=Serine/threonine kinase; chromosome CDS258437 1161 + 0.242033
polA UU414 DNA polymerase I: 5'-3' exonuclease domainRecName: Full=5-3 exonuclease; EC=3.1.11.-; chromosome CDS477118 870 - 0.266667
polC UU377 DNA polymerase III alpha chain 1RecName: Full=DNA polymerase III PolC-type; Short=PolIII; EC=2.7.7.7; chromosome CDS430144 4329 + 0.259413
recA UU084 recombination proteinRecName: Full=Protein RecA; AltName: Full=Recombinase A; chromosome CDS102208 1005 + 0.276617
recR UU089 recombinational DNA repair proteinRecName: Full=Recombination protein RecR; chromosome CDS107869 606 + 0.267327
ripX UU145 integrase-recombinase proteinSubName: Full=Integrase-recombinase protein; chromosome CDS189018 783 + 0.234994
rnhB UU397 ribonuclease HIIRecName: Full=Ribonuclease HIII; Short=RNase HIII; EC=3.1.26.4; chromosome CDS456919 951 - 0.245005
ruvA UU449 holliday-junction binding proteinRecName: Full=Holliday junction ATP-dependent DNA helicase RuvA; EC=3.6.4.12; chromosome CDS509678 588 - 0.215986
ruvB-1 UU438 holliday junction DNA helicase (fragment)SubName: Full=Holliday junction DNA helicase; chromosome CDS499537 330 - 0.224242
ruvB-2 UU448 holliday junction DNA helicaseRecName: Full=Holliday junction ATP-dependent DNA helicase RuvB; EC=3.6.4.12; chromosome CDS508750 939 - 0.239617
ssb UU553 single-strand binding proteinRecName: Full=Single-stranded DNA-binding protein; Short=SSB; chromosome CDS686662 501 - 0.309381
tnp-1 UU372 integrase-recombinase proteinSubName: Full=Integrase-recombinase protein; chromosome CDS425870 624 - 0.251603
tnp-2 UU404 integrase-recombinase proteinSubName: Full=Integrase-recombinase protein; chromosome CDS464668 807 - 0.211896
topA UU590 DNA topoisomerase IRecName: Full=DNA topoisomerase 1; EC=5.99.1.2; AltName: Full=DNA topoisomerase I; chromosome CDS738155 2034 - 0.273353
ung UU548 uracil-DNA glycosylaseRecName: Full=Uracil-DNA glycosylase; Short=UDG; EC=3.2.2.27; chromosome CDS682041 639 - 0.256651
uvrA UU102 excinuclease ABC sununit ARecName: Full=UvrABC system protein A; Short=UvrA protein; AltName: Full=Excinuclease ABC subunit A; chromosome CDS127704 2832 + 0.296257
uvrB UU120 excinuclease ABC subunit BRecName: Full=UvrABC system protein B; Short=Protein UvrB; AltName: Full=Excinuclease ABC subunit B; chromosome CDS157411 2001 + 0.283858
uvrC UU381 excinuclease ABC subunit cRecName: Full=UvrABC system protein C; Short=Protein UvrC; AltName: Full=Excinuclease ABC subunit C; chromosome CDS437785 1755 - 0.22906
uvrD UU501 DNA helicase IISubName: Full=DNA helicase II; chromosome CDS617250 2232 - 0.262993
xerC UU222 integrase-recombinase proteinRecName: Full=Tyrosine recombinase XerC; chromosome CDS267016 753 + 0.220452