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2024-04-29 01:38:03

Gene list

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COG category: Replication, recombination and repair
Organism: Legionella pneumophila subsp. pneumophila str. Philadelphia 1, Philadelphia 1

Number of genes found: 183

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Legionella pneumophila subsp. pneumophila str. Philadelphia 1, Philadelphia 1
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA lpg1492 spectinomycin phosphotransferasechromosome CDS1649569 1023 - 0.344086
NA lpg0390 hypothetical proteinchromosome CDS431953 1059 - 0.387158
NA lpg1812 ATP-dependent DNA helicase (UvrD/Rep helicase)chromosome CDS2027092 3231 + 0.384401
NA lpg2184 hypothetical proteinchromosome CDS2457486 1407 - 0.383085
NA lpg2638 hypothetical proteinchromosome CDS2980029 1383 - 0.38684
NA lpg2673 N6-adenine specific methylasechromosome CDS3020700 546 + 0.382784
NA lpg0647 hypothetical proteinchromosome CDS693821 1407 + 0.383795
NA lpg0968 hypothetical proteinchromosome CDS1061065 1722 - 0.349013
NA lpg0634 hypothetical proteinchromosome CDS670559 1350 - 0.387407
NA lpg1077 inner membrane proteinchromosome CDS1172002 1710 - 0.431579
NA lpg2216 purine NTPase, putativechromosome CDS2500553 1773 - 0.351382
NA lpg1229 site specific recombinasechromosome CDS1356847 1218 + 0.350575
NA lpg1104 hypothetical proteinchromosome CDS1207933 993 - 0.35146
NA lpg1261 hypothetical proteinchromosome CDS1387521 390 - 0.348718
NA lpg2363 transposase (IS652)chromosome CDS2668117 1200 - 0.396667
NA lpg1764 ATPase associated with chromosome architecturechromosome CDS1969632 1305 - 0.393103
NA lpg1150 transcription regulator proteinchromosome CDS1266926 1080 + 0.398148
NA lpg2529 hypothetical proteinchromosome CDS2859811 1719 - 0.379872
NA lpg1402 deoxyribonuclease TatDchromosome CDS1546357 813 + 0.389914
NA lpg2173 TnpA transposasechromosome CDS2438461 1176 + 0.364796
NA lpg0250 ATP-dependent RNA helicase, DEAD box familychromosome CDS296785 1245 - 0.404819
NA lpg0980 putative integrasechromosome CDS1072751 924 - 0.386364
NA lpg0489 hypothetical proteinchromosome CDS528685 291 + 0.381443
NA lpg0820 endonucleasechromosome CDS899600 294 + 0.387755
NA lpg0003 DNA recombination and repair protein ATPase RecFchromosome CDS3126 1062 + 0.357815
NA lpg1947 hypothetical proteinchromosome CDS2174909 750 + 0.321333
NA lpg0147 transposase, IS911chromosome CDS177533 294 - 0.380952
NA lpg1072 transposase TnpAchromosome CDS1167775 921 - 0.372421
NA lpg1779 hypothetical proteinchromosome CDS1987723 402 - 0.318408
NA lpg0899 A/G specific adenine glycosylasechromosome CDS973918 1068 - 0.388577
NA lpg1145 hypothetical proteinchromosome CDS1259593 2310 + 0.361039
NA lpg2366 inner membrane proteinchromosome CDS2670946 1752 - 0.47089
NA lpg2048 hypothetical proteinchromosome CDS2290607 852 + 0.380282
NA lpg0488 transposase (IS4 family, ISSod6)chromosome CDS528190 435 + 0.367816
NA lpg1071 transposase TnpA (Uma4)chromosome CDS1167447 276 - 0.336957
NA lpg1268 hypothetical proteinchromosome CDS1395801 825 - 0.309091
NA lpg0144 transposase TnpA or TnpA2chromosome CDS174882 1176 - 0.363946
NA lpg2448 transposase, ISSod6chromosome CDS2760549 438 - 0.376712
NA lpg2269 RecB family exonuclease, hypotheticalchromosome CDS2570779 2577 + 0.386496
NA lpg1315 transposasechromosome CDS1445315 750 - 0.418667
NA lpg1556 MutT/nudix family proteinchromosome CDS1719561 408 - 0.335784
NA lpg1990 hypothetical proteinchromosome CDS2230973 735 - 0.314286
NA lpg0815 hypothetical proteinchromosome CDS893088 699 + 0.373391
NA lpg1312 erythrocyte membrane-associated antigenchromosome CDS1440709 3408 + 0.316315
NA lpg0810 hypothetical proteinchromosome CDS889377 318 + 0.352201
NA lpg0696 hypothetical proteinchromosome CDS758172 1713 - 0.366608
NA lpg2070 reverse transcriptasechromosome CDS2311404 1521 - 0.411571
NA lpg0940 LidAchromosome CDS1017170 2190 - 0.369406
NA lpg0794 ISI400 transposase Bchromosome CDS869351 348 + 0.456897
NA lpg1925 hypothetical proteinchromosome CDS2149854 2646 + 0.369237
NA lpg2558 integrase of prophage CP-933Cchromosome CDS2892417 429 + 0.377622
NA lpg2421 transposase (ISSod13)chromosome CDS2733597 1080 + 0.365741
NA lpg1409 hypothetical proteinchromosome CDS1555198 771 - 0.390402
NA lpg1317 hypothetical proteinchromosome CDS1447359 888 - 0.333333
NA lpg1963 hypothetical proteinchromosome CDS2196799 2100 - 0.30381
NA lpg1263 hypothetical proteinchromosome CDS1388724 1269 + 0.257683
NA lpg2149 hypothetical proteinchromosome CDS2397359 360 + 0.372222
NA lpg2117 transposase, TnpAchromosome CDS2362653 561 - 0.360071
NA lpg2802 DnaA-like family proteinchromosome CDS3156673 738 + 0.373984
NA lpg2360 DNA primase DnaGchromosome CDS2664144 1746 + 0.390034
NA lpg0991 exported membrane proteinchromosome CDS1085551 1260 - 0.43254
NA lpg1700 uracil DNA glycosylasechromosome CDS1894092 720 - 0.365278
NA lpg2793 LepA, interaptinchromosome CDS3143077 3456 + 0.36603
NA lpg2118 transposase TnpAchromosome CDS2362653 1176 - 0.363946
NA lpg2239 hypothetical proteinchromosome CDS2533540 3858 + 0.366511
NA lpg2489 DNA repair protein RadCchromosome CDS2803224 684 + 0.396199
NA lpg1464 hypothetical proteinchromosome CDS1617735 159 + 0.333333
NA lpg1142 hypothetical proteinchromosome CDS1257167 231 - 0.341991
NA lpg1922 ATP dependent DNA helicase (DEAD box family) Rad3chromosome CDS2144181 2001 - 0.402299
NA lpg1703 SOS mutagenesis and repair UmuC proteinchromosome CDS1898621 1296 - 0.398148
NA lpg1085 phage related integrasechromosome CDS1180278 1245 - 0.384739
NA lpg2077 TraIchromosome CDS2319208 5946 - 0.391356
NA lpg2050 hypothetical proteinchromosome CDS2292022 1059 - 0.355996
NA lpg1608 MutT/nudix family proteinchromosome CDS1774858 483 + 0.405797
NA lpg0795 ISI400 transposase Bchromosome CDS869667 654 + 0.400612
NA lpg2527 hypothetical protein with coiled coil domainchromosome CDS2856264 1677 - 0.359571
NA lpg2872 (di)nucleoside polyphosphate hydrolasechromosome CDS3250175 528 - 0.431818
NA lpg2119 transposase (ISmav2)chromosome CDS2363881 1026 - 0.381092
NA lpg1867 site specific recombinase, phage integrasechromosome CDS2087055 1227 + 0.407498
NA lpg0262 bacteriophage related DNA polymerasechromosome CDS309672 639 - 0.402191
NA lpg2597 DNA processing enzyme DprA (SMF family)chromosome CDS2929940 1086 + 0.421731
NA lpg1271 ISSod6 transposase, IS1301chromosome CDS1400011 786 - 0.400763
NA lpg2573 transposase (resolvase, DNA invertase)chromosome CDS2903857 549 - 0.386157
NA lpg0735 DNA helicase, SNF2/RAD54 family domain proteinchromosome CDS803263 3267 + 0.379859
NA lpg2365 TraKchromosome CDS2670253 366 - 0.387978
NA lpg2866 primosomal protein N'chromosome CDS3242470 2178 + 0.413223
NA lpg0143 transposase (01), TnpAchromosome CDS174882 561 - 0.358289
NA lpg0684 hypothetical proteinchromosome CDS734908 1407 + 0.383085
NA lpg2556 putative protein kinasechromosome CDS2890013 1389 + 0.321814
NA lpg0394 methylated DNA protein cysteine S-methyltransferasechromosome CDS436108 456 - 0.432018
NA lpg2147 hypothetical proteinchromosome CDS2394467 1449 + 0.36922
NA lpg0793 IS1400 transposase, transposase ORFA,chromosome CDS869088 267 + 0.333333
NA lpg2409 hypothetical proteinchromosome CDS2720506 819 + 0.347985
NA lpg1814 hypothetical proteinchromosome CDS2031718 555 + 0.36036
NA lpg1884 microtubule binding protein, putativechromosome CDS2102459 1218 + 0.35468
NA lpg2084 putative conjugative transfer protein TrbCchromosome CDS2334705 672 - 0.392857
NA lpg1314 hypothetical proteinchromosome CDS1444970 291 - 0.415808
NA lpg0002 DNA polymerase III beta chainchromosome CDS2026 1104 + 0.350543
NA lpg1242 transposase, ISSod13chromosome CDS1371547 1080 + 0.365741
NA lpg2364 hypothetical proteinchromosome CDS2669531 366 + 0.336066
NA lpg2994 hypothetical proteinchromosome CDS3384024 357 - 0.344538
NA lpg2089 putative conjugative transfer protein TraBchromosome CDS2340242 1320 - 0.418182
NA lpg2555 hypothetical proteinchromosome CDS2888571 855 - 0.325146
NA lpg0261 ISSod6 transposase, ISI301chromosome CDS309426 180 - 0.35
NA lpg1081 reverse transcriptasechromosome CDS1176202 1503 - 0.412508
NA lpg0977 single strand DNA binding proteinchromosome CDS1071092 423 - 0.416076
NA lpg2813 hypothetical proteinchromosome CDS3173075 861 + 0.384437
NA lpg0146 transposase B, TnpAchromosome CDS176652 234 - 0.367521
NA lpg0866 3-methyladenine DNA glycosylasechromosome CDS939745 552 - 0.365942
NA lpg2566 ISxcC1 transposasechromosome CDS2898596 846 + 0.44208
NA lpg2565 transposase ORF-A, IS-typechromosome CDS2898333 267 + 0.378277
NA lpg0787 hypothetical proteinchromosome CDS861690 537 + 0.374302
NA lpg2137 calmodulin-dependent protein kinasechromosome CDS2384233 1617 - 0.326531
dam lpg0654 DNA adenine methylasechromosome CDS702084 819 - 0.362637
dam lpg2075 DNA adenine methylasechromosome CDS2316456 837 - 0.352449
dbpA lpg2122 ATP dependent RNA helicase DbpAchromosome CDS2367160 1407 + 0.390192
deaD lpg2345 ATP-dependent RNA helicasechromosome CDS2648364 1770 - 0.40565
dinP lpg0554 DNA-damage inducible protein Pchromosome CDS594470 1068 - 0.412921
dnaA lpg0001 chromosomal replication initiator protein DnaAchromosome CDS654 1359 + 0.376748
dnaB lpg0738 replicative DNA helicasechromosome CDS807400 1383 + 0.430947
dnaE lpg0962 DNA polymerase III, alpha subunitchromosome CDS1050534 3447 + 0.416884
dnaQ lpg1384 DNA polymerase III, epsilon subunitchromosome CDS1531824 756 + 0.346561
dnaZX lpg2754 DNA polymerase III subunits gamma and tauchromosome CDS3103406 1671 + 0.405745
fis lpg1743 Fis transcriptional activatorchromosome CDS1945064 288 - 0.364583
fis lpg1370 hypothetical proteinchromosome CDS1516880 297 - 0.356902
fis lpg0542 DNA binding protein Fischromosome CDS585004 282 + 0.386525
gyrA lpg1417 DNA gyrase, A subunitchromosome CDS1563781 2616 + 0.41055
gyrB lpg0004 DNA gyrase subunit Bchromosome CDS4482 2421 + 0.397356
hepA lpg2299 ATP-dependent RNA helicasechromosome CDS2598385 2877 + 0.399722
hipB lpg2955 integration host factor beta subunitchromosome CDS3344406 312 + 0.410256
holA lpg1346 DNA polymerase III, delta subunitchromosome CDS1484026 1026 - 0.323587
holB lpg1400 DNA polymerase III, delta prime subunitchromosome CDS1544952 906 + 0.350993
holC lpg2632 DNA polymerase III, chi subunitchromosome CDS2973928 435 + 0.381609
hupB lpg1858 HupB DNA binding protein HU-betachromosome CDS2079705 303 - 0.392739
ihfA lpg2709 integration host factor (IHF) alpha subunitchromosome CDS3060361 300 - 0.353333
int lpg1070 integrase, phage relatedchromosome CDS1165936 1182 - 0.36802
intD lpg2057 Prophage dlp12 integrasechromosome CDS2296937 1005 - 0.395025
lig lpg0958 DNA ligasechromosome CDS1043779 2052 + 0.417154
lok lpg1483 ovarian-specific serine/threonine-protein kinasechromosome CDS1638274 1590 + 0.361006
mfd lpg0954 transcription repair coupling factorchromosome CDS1036708 3462 - 0.401791
mutH lpg1480 DNA mismatch repair protein MutHchromosome CDS1635309 672 + 0.386905
mutL lpg2697 DNA mismatch repair protein MutLchromosome CDS3049445 1731 - 0.407857
mutM lpg0557 formamidopyrimidine DNA glycosylasechromosome CDS596672 825 - 0.4
mutS lpg1805 DNA mismatch repair protein MutSchromosome CDS2014053 2598 + 0.407236
mutT lpg2405 mutator MutT proteinchromosome CDS2716905 402 + 0.365672
nth lpg2880 endonuclease IIIchromosome CDS3260567 636 - 0.413522
parC lpg2980 DNA topoisomerase IV subunit Achromosome CDS3371925 2256 - 0.398936
parE lpg0691 DNA topoisomerase IV subunit Bchromosome CDS744892 1881 - 0.427964
phrB lpg0212 deoxyribodipyrimidine photolyasechromosome CDS245097 1416 - 0.418079
pkn5 lpg0208 serine/threonine-protein kinasechromosome CDS238638 3060 + 0.384967
polI lpg0099 DNA polymerase Ichromosome CDS112238 2691 - 0.414344
rdgC lpg1187 exonuclease involved in removal of stalled replication forkchromosome CDS1314772 945 - 0.394709
recA lpg1801 RecA bacterial DNA recombination proteinchromosome CDS2010421 1047 - 0.410697
recG lpg2033 ATP dependent DNA helicase RecGchromosome CDS2276012 2073 + 0.411963
recJ lpg1461 single stranded DNA specific exonuclease RecJchromosome CDS1611889 1740 + 0.401724
recN lpg2824 DNA repair protein RecNchromosome CDS3187409 1668 + 0.402278
recO lpg0943 DNA repair protein RecOchromosome CDS1023865 690 + 0.421739
recQ lpg0867 ATP-dependent DNA helicase RecQchromosome CDS940306 1827 - 0.395731
recR lpg2756 recombinational DNA repair protein RecRchromosome CDS3105451 600 + 0.413333
rep lpg2816 ATP-dependent DNA helicase Repchromosome CDS3177469 1998 - 0.393393
rnhA lpg1383 ribonuclease HIchromosome CDS1531442 432 + 0.405093
rnhB lpg1373 ribonuclease HIIchromosome CDS1519616 576 + 0.402778
rnt lpg2964 ribonuclease Tchromosome CDS3354133 624 + 0.395833
ruvA lpg1288 Holliday junction DNA helicase RuvAchromosome CDS1415804 600 + 0.393333
ruvB lpg1576 Holliday junction DNA helicase RuvBchromosome CDS1741547 1032 - 0.420543
ruvC lpg1287 crossover junction endodeoxyribonuclease RuvCchromosome CDS1415283 525 + 0.409524
sdhA lpg0376 SdhA, GRIP coiled-coil protein GCC185chromosome CDS414780 4290 - 0.35035
ssb lpg0356 single strand binding proteinchromosome CDS396429 489 - 0.394683
tag lpg0618 3-methyladenine DNA glycosylasechromosome CDS651687 573 - 0.39267
topA lpg2599 DNA topoisomerase Ichromosome CDS2931531 2280 + 0.420175
traA lpg1241 conjugal transfer protein TraAchromosome CDS1368713 2670 + 0.399251
umuC lpg1232 hypothetical proteinchromosome CDS1359759 1278 + 0.425665
uvrA lpg0384 excinuclease ABC A subunitchromosome CDS425369 2856 + 0.427521
uvrB lpg0072 excinuclease ABC subunit Bchromosome CDS78867 1992 + 0.428213
uvrC lpg2645 excinuclease ABC subunitchromosome CDS2991885 1857 - 0.394723
uvrD lpg1842 DNA dependent ATPase I and helicase IIchromosome CDS2063715 2193 - 0.423621
vsr lpg1235 patch repair proteinchromosome CDS1364344 429 - 0.331002
xseA lpg0826 exonuclease VII, large subunitchromosome CDS904094 1332 - 0.402402
xseB lpg2329 exodeoxyribonuclease VII small subunitchromosome CDS2633493 231 + 0.402597
xth lpg0648 exodeoxyribonuclease IIIchromosome CDS696023 783 + 0.393359
xthA1 lpg0649 exodeoxyribonuclease IIIchromosome CDS696777 792 + 0.415404
yqgF lpg0587 hypothetical proteinchromosome CDS621102 429 + 0.431235
yrfE lpg2353 NUDIX hydrolasechromosome CDS2657485 564 - 0.437943