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# Idiomarina loihiensis L2TR, L2TR

>IL1318 Uncharacterized conserved protein
MSQQVEVLFENLWQDYLSRTPSAKKVHQILGEGHPIVNDHVAFRTFDISP
VGLEVLAQHFLDLGYKEGGDYHFEAKKLRAKHFEHEDPELPKVFISELMT
AEFSDELQSKVKDMVAQVSAEDTKKPDFLYSGTHWKVSYADYQSLLEESE
YAAWMAAFGYCANHFTVSVNQLPGYKTLEQVNQKLKDNGFKLNTSGGEIK
GSPEVYLEQSSTMADRHPVEFSDKTVEIPSCFYEFAKRYEIEDGKLYTGF
VAASADKIFESTNAK
>IL1707 NTP pyrophosphohydrolase, NUDIX family
MTINTRADFIRRFSLYPSPPVERRIDEPLRKRLRPAAVLIPIIERPHGLS
LILTRRSSKLRKHAGQISFPGGRFDETDSDLLDTALRETEEEIGLPRSQV
EVIGRLHDYPVLSYFMIRPYVAFVSPQQPLVAEESEVAEIFEVPLADILD
HGNHYVYRIRKFIYDRVYFIPWQHRNIWGATAGILRELSEQLQPDGKNHF
RPLN
>IL2567 Homolog of DinP DNA polymerase involved in DNA repair
MWLYCHFPQLLLDNRVRLQPDSNTLPLALYQLQGNQSVIVQCNTLAREAG
VKPSIQTVMAISLCEQLQLVEYIPEREQQVLQQLATRLYQWAAKLVLYPP
KGLAIELSSLAQLYGGMDAVFNTLSREVDALPIKAQLAVADNPLAAQLLA
EYDCPVSLNRKESAQLLAQLPIGAAGLGTKTQKHCKAAGFRQLGELIQLS
GDEVGRQLGLETQLYLERIQGRQQQSYNFFTPPESFRQSLDLVTEIPHWQ
GLLFPLKRLFGELEDFLYQRQKVTQQVSIELHHRYEPPSVVPVALAEPGW
RGQSFLSLLQLKMESIPLPEAVIEITLVANELLQSEQHNSHFFGVQQHRH
ETLQLIGRLQAKLGNNAVFSPAMNDDPRPGNNEFRRPAGEKPQVLSPAPK
RPLWLLQPPQLTSIDLWQLRHGPERKVCGWWDAGDIARDYWIARDKFQRV
GWLYFESGQWYLHGWFS
>IL1779 3-methyladenine DNA glycosylase homolog
MTDLTTDFSQFYERACQRKGGENAMLSRMPKVTPASELKQLDDRVILSTI
TRCIFRAGFVWRIIEAKWPGFEEAFKGFVPLYWQQVPPEVLEALSKDERI
VRNQQKINTVPANARMIVEVAEEYGSFGQFLAQWPSSQQAELLHYLKKNG
SRLGGVTPQYVLRELGWDGFILSNDVITALTNYKLIDASPTSQKGLKQAQ
SAFNHWHQQTQLPYSHLSRILSYSVGE
>IL1532 IS4-like transposase
MFLSQALDQLQEFTPDDFSKLPDLLEPELIEQCLEDAGVTTVRKRRLPMD
FMVWAVVGMALFREMPMRQLVSHLDLMLPGKRPYVAPSAVVQARQRLGAN
VMKRMFELTNELWFDKLPLSHWNNLSVLAVDGTVWRTPDTPENDASYGRT
ANQRAESDYPQIRMVNQMEVSSHLVTSTEFGSIAEVSEVDLAARLIEQTP
DHSLTLFDKGFYALGLLDQWHRAGEERHWLIPLRKGAQYSVKKSFSDTDK
LVEIRLSPQAKKKWDNAPDTVQARLVCKKIAKKEVAILTSMTDTMRYPEA
DIVDLYAHRWEIEQAYREMKQYMLKSELTLRSKRPDLVEQELWGMLVAYN
LLRYMMAQMAYSLKHIEPNQISFKQASHYLVGQLHILVHISPGKIPKVME
QMMEMASAFVLPERRERYYPRSIKRRPQRYPMRPPSKPTAS
>IL0494 Uncharacterized conserved protein
MSSPVSFRVSERDVYISIDAGTPPSEVKADKLQQAWQASKFSAAKLLDPQ
MLLQTATKYAQHYSKDSNSSIPFQVAIAEIFDADLNLQVSDDDMKVTASG
IVGYGGKALTQEIIIAKLKEKKITSGIQRKAIDALVEHTNEAPPGAELSV
TVAKGKYPINGSNAKFKPLTDDARKRVLRPQLREDGTADMRDLGAEVTVD
PDHPLLQKIPPSKGRAGFTVFGQELEARDGEDRDFKPGEGTRVSDTDANL
IVADRTGMPSFSENSVQVDDVMQLNNVDVSTGHVKFKGSVIVTGNVSEGM
KVTCSGDITVGGYVDSAELHAEGNITVRKGCIGHLIHSGDNAENDEDADE
WIPDVSTKLIAGGSIWCAYAQYSYFEAQTGVNTDKQLTHCHVITKGPLAI
GGEGRNARGKLIGGTIETCAHVYCGQLGAPAGTKTRIYWSLPPADPQSLE
HLNSMRALLTKTLARVKVVQQGLNRCDKLEDGVKKLEYQKKLKIELRKLK
TRIINTRTSIDSILEAFENHPVLRTMVSKEVFPGILFIFKEKSLRIKEHR
NGTMFLLQDKQLRVDSLL
>IL1956 NTP pyrophosphohydrolase, NUDIX family
MTIRFHRDDVKVKEKVPLYQGFLSVYRYSLQHRLFSGDWSPEINRELMER
GHAVVVIPYDPIRDQLVVLEQFRVGALDDKNGPWLFEFVAGMFDADESAE
EVATRELEEEAGLKAKRLIYATSYYSSPGGTDEKLTIYIAEVDSQSAASF
GGLPEEDEDIRVHVLPRTEVINMLEREEINNAASVIGLQWLLLHRDKMFS
DQEQN
>IL2607 Predicted signaling protein with an ATPase domain
MNRDEIRFSVESAILRELGEQLVSSSEVALTELIKNSYDADATSCNVEWS
DSRIVVKDTGHGMSLDDFKNKWMRIATGNKAGSPTSKVFGRTITGSKGIG
RFATRFLGKTLLLITVYENKCGDRSKIVARFNWEKVDSQSSIDSLIISYR
LYNRVEDSAGTTLVIKNLRHKFDYKKIKQIKDSTLSMVSPIDALLSDAPY
DFKLKHSYKSKREVSSEESDKFNLNFIVPGDKTEKRKSEVDNIADDVLKS
YLFRSYFYTNGNNLFMKVLHRDKGLCDEVKIPIKNLMGCDIYGQVNYFPS
RKGMLRNGTINGNKARAWIRNSPSVAVYDKSFKVPPYGEIDDDWLSLNAD
SSRSERHWRSPFMKEHYEMSTEQRTSPKLNPMLALPETHQLVGGVFIEAS
NARITDDIKSLSPSTDRQGLVENEGFQQLNDICRFSIELVAYHDKKYSLD
EEEERKKRDYERAQDEIDEVIDLIENTSTLSQEDKEALTSKYSSLRNDYD
KLIDHERKTRENFVNMGLLGVVAGFMTHEFKSTLHLLEETLDRVKFLEAN
YPELSGHSQKLDESLSAFLAYTEYTESFIESINFSNEVYFRAFPQIQDVV
NSFSKFRLERDIDIDMVDVDRDVYAPKMPVAVYKGIIHNLYTNALKALVS
ESKENKCIKISTLNRKNSHFIRVSDNGAGIPPGTRRLIWDPLYTTTSNEN
NPLGSGMGLGLPLVKQIIEKLGGRIELVSPENGFATTFEIELPVK
>gid:303035    Il-IS_2, transposase
MTELPDNILHLPQYQVLGCKSTDDEMHFQVDVPDPIACEECGVQGEFVRF
GKRDVPYRDLPIHGKRVTLWVVRRRYTCRACKTTFRPQLPEMVDGFRMTL
RLHEYVEKESFNHPYTFVAAQTGLDEKTVRDIFNARAEFLGRWHRFETPR
ILGIDELYLNKRYRCILTNIEERTLLDLLATRRQDVVTNYLMKLKDRQKV
EIVSMDMWNPYRAAVKAVLPQARIVVDKFHVVRMANDALERVRKGLRKEL
KPSQSRTLKGDRKILLKRAHEVSDRERLIMETWTGAFPQLLAAYEHKERF
YGIWDATTRLQAEAALDEWIATIPKGQKEVWSDLVRAVGNWREETMTYFE
TDMPVTNAYTESINRLAKDKNREGRGYSFEVMRARMLYTTKHKKKAPTAK
VSPFYKKTIGYGLPDFAEELNYGVDLSTI
>IL1333 Mg-dependent Dnase homolog
MFVDSHCHLDKINPEKAGADLKEIVAAARANKVEHMLCVCVTLEDFPAMQ
FAVAEFDDVSISCGVHPLYVKDSKTPIAELGAKLRELTALNSVVAVGETG
LDYFYHPESKVLQQENFEQHIEIANDVNKPLIIHTRDAQQDTLSLLRNGH
AEKPGGVLHCFTESLEMAKKAIDDLDFFISISGIASFRNAQELRDTIKAL
PLEKLLIETDSPWLAPVPHRGKENQPAYVVDVAKCVADVKGITLEEVAKT
TTANYYKLFANS
>gid:304223    Il-IS_1, transposase
MAIVNRIALDLAKDFIQVLALDENEQEVFNKKLRSNKVLAKLATLSRTDD
CEVAVESCGMSHYWRRECEKLGYKTVALPPRFVKAYLQGEKNDANDARAI
AEAASRPNRQTVRLKSIEQQDLALMVNQREGFVQTRTQFSNRLRGQLAEY
GILLPKRVGTILQRVPEVLEDDSNALTLQSRDLINRLYQMLRAVDEEVKA
LDKHLATQAERNEDSQRLMTLPGIGPITATSLLALIGDVSEFKRGRNLSE
YLGLVPRQNSSGGKDRLGGITKKGNTKLRTLLVHGARSALRVAQQRHDRL
SLWAQDVAKRRGNNVAAVALANKHARIIWAMLKNKEDYRMTAA
>IL1615 Transposon related ORF, HTH transcriptional regulator
MTKRKKYSPEFKREAVALTKQPGVSCRQVAIEIGINPNLLSRWRREAEPS
SKEAFKGSGNPRDEEMARLKRENARLKKERDFLREAATFFAKESS
>IL2091 Predicted membrane protein
MIFRTFIVVLCLIPCFSYGSEAYLNAAEKQFESLLELLPEDEKREWKHRD
FEEVMDYSNKLDELKKTAEYIRNQSDSSDVDGILAFSFLADAIQYELDLK
TSLVNDLGLHLYRSYEINNVNPVRKAIEAELVALQNASGALQLQSKLTKY
FKLQREIAELSKNPPTKMTLEYRPQDNAWDSDPELVKKYVLFDWLSALSK
LKEKLYELQKIKDSFASFNYLRLKDPIAFVSLGAQLAILLVAVAGYLISY
TEKPSIKVVASLVAASMLLSVFLVFVSSSTIFNLIVQASIPSLFIAYWVY
RNSHNKKVQPTADGRG
>IL2634 Predicted endonuclease containing a URI domain
MSWAVYLIKCADNTFYTGVTTDIERRVNEHNTDDKKGAKYTRARRPVALV
WSEEHPNRTKACQREYEIKRWPRAKKVELTGGI
>IL0423 Predicted endonuclease
MQEVVTGKRAELLSAEFLKKNNLTIICKNYRIDGGEVDIIARDGHYWVFC
EVKFRDDESFAAVIEQIQPQQCRRIRYTARHYLLSNNIDEHTAAIRFDVI
AIVGQPTKIEWFKDAF
>IL2225 Uncharacterized conserved secreted protein
MKRYLIILLAVVFISPAVSQDDLERYLPQDQIHWLTGDDDERYLALKKEY
LQAFERGQIVLLPDWHYHPLQSFYIRPVYENAPNFGWTTWALTPPDNDIR
TDNLQTPATTTHFPDAADEEVFTPLVSALQQRMTLLLDETLDRPGFSVWV
VEGITADIALRLLESEPSIMPDAIVLVNAYVPQFQYNRALADRISQSQLP
VLDIRSAEGNRWVGEHWSLRKKLANKYQHPAYRQRQLVNSGNAGQRELTS
TIKGWLEFHGF
>IL2608 Site-specific DNA-methyltransferase
MTVNPESNQFMDNYLSRCQIDTPDKIVEFVWKLVKEYRRDIRSVLDLGAG
SGNFSRSDVYDSYLGIEVDSKRLGDFQNENRKRILNQCAFFGEDFGGDFD
LAIGNPPYVRHHDLSPKWKLELSGILGRALDEKFDKRANGFVYFMCQALL
STADDGLCAQVVPYEWVSRPSAAFLRNAIEKKGWSVDVYRFESNIFTDSK
VLTTASLSIIDKSTSSCRWRFFKVSEDLKIKEAESVTGSDERLLSYTKRD
KEIFAQRGLSPGSQTVFCLTEKIRKQFGLKVGFDVFPCITQMKTLPPNID
SLDENNFFKYYVLGDQKCWLVSPSSSPSKNLQRYFDSVPEELIDTYTCRK
QSPWWRYSPHPSPSILYNSGFTKFGPRTLTNRIGAIAIGTVHGVHQVAED
DIDSLINHLKAVDFERQIVSHSNKLKKVEVNQMNSVIVDWLKRQT
>IL1626 Transposon related ORF, HTH transcriptional regulator
MSNNRYPEEFKIEAVRQITDKGYSVADVSRRLDVSVHSLYAWVKKYGPEA
EKHAAQTEEQAELKRLRKELQRVTEERDILKKAAAYFAKQSD
>IL2319 Predicted glycosyltransferase
MENQTLPLNASSQPQLKLTYLRPGDIIDVEFSSATKVRTKLQVVGFDTGN
YLLLKQPNPRTDGSYADVLYEGNPVIVRLVLEGEAGECLAFKTKIRAVSN
IPFRLLYLDYPKEIENRALRAQRRVRTHIPVDVTADGSQTNAKKKLASGV
IVDISSAGCRIVFKAQNQTGNVTHMNIKISIGSGSQKEPLTLSGQIMNQR
KEHGMISVGVRFTDEEAHIGKVFEHLLIDTEFEC
>IL0681 Transposon mobilization protein homolog
MKAQHRKAYVSVKSRYYKRDAATAVLDHANARRNGFTKSINVHPEYSCDN
VGLYPKECNSSAEALERACTQYKLVTGKKVRKDFNLLFEHVVVLTESQYA
KLEKTWGKQKAKELVLKQLALYMRKIKAEFGFEPIGVEFHADEGHFQPSK
TGEEPIFCRNIHAHCHFFNYDFTKKVAPLRHLMKKQKDGRGRTNQLNPNF
ERMQDIAANLFSPLGFNRGESKNVTGKEHLTKEAFVLKKLHGMEEQIADL
TNKNRALEVKLQAKHKKSEILDKKISVQENKSAWLEKHLQKLQTMANELE
TAIKRRCQSALKLMSQRLKRRASPSQSLNRH
>IL0503 NTP pyrophosphohydrolase, NUDIX family
MIDAEGFRANVGIVICNGHGQVFWARRINQQSWQFPQGGIHEGETPEQAM
YRELYEEVGLKPEQVEILYTSRQWLRYRLPKRLIRREQRPMCVGQKQKWF
LLRLKCREEDVDVLHSGHPEFDGWRWVSYWYPVRQVVSFKRDVYRRVMKE
FATQAMPFRASGGRQHRRKR
>IL0225 N6-adenine-specific methylase
MRQKRQTSASGDYRIIGGKWRGRRLPVADSPGLRPTTDRVRETLFNWLQW
DITDARVLDLFAGSGSLGFEAASRGAAQVTLIEAVKTVSLQLQNNVTLLS
SENIDVITHNALDWLQTESAEAYDMVFIDPPFREGLADKTLKLLDESNWL
AADNQVYLETEKEWPLKLPANWRVFKEKTHGQVCFRLLTKDIA
>IL0665 Uncharacterized ATPase related to the helicase subunit of the Holliday junction resolvase
MAGLDLDFQPDFKPLAARMRPRTVDEYVGQQHLLAPGKPLRVAVEQGHLH
SMILWGPPGTGKTTLAELIATQANATVSRISAVTSGVKDIRKAIEEAKLL
AQQQGRRTILFVDEVHRFNKSQQDAFLPHIEDGTIVFIGATTENPGFELN
NALLSRARVYRLQTLSKTDLEQALESALTDAERGLGQRQLQLEGEARAKL
LDLAGGDARRLLNYLEVVADFVESSSQPITPELITAAIGEKATAFDHQGD
HYYDVLSAFHKSVRGSSPDGALYWYARLLTGGGDALVIARRLLAIASEDI
GNADPRALQLALNAWDTYHRVGPAEGERAIAQAVIYCACAAKSNAVYNAF
KSALRTAKEHSDAPVPEHLRNAPTKVHKAQGYGADYQYAHNYPNAYVPGE
RYLPSEIADTQFYAPEPRGLEIKLQEKLRWLQDMDSKSDWHREPDE
>IL1262 Uncharacterized conserved secreted protein
MYRLLAVITFLILIAGCTANLGYKFADTLVEWKVKDYVDLTGEQEELLAE
KVDEMHLWHAQTQLPLYRDELKNLRDKVDKQTLSKNDISKFEDKLWTFWD
NVLVRTEAEAGLLATLSLKQRQQLIRRLEEAQEERYQRFQDDQEENPILR
RLDRISEVEEDLEDIIGSLTKEQDKLLRSWVADSPELREQWLSYRSNWLG
EFEKALLKQPVDENQLSALILDPQQLRSEELQQKADKNSQLRKEFLWDIY
QSLTGEQRKKVIEKADEYIDLLDSLINDFND
>IL1468 ATPase involved in DNA replication initiation
MSPQQLPLAVQLPDDEIFSTFLAGDNSTLLSWLESLPTTEPPLRRSQQLT
WLSGASGVGKSHLMHSVIASAGSQYRIAYLPLRELAKADASAVLQGIDQA
DLICLDDIDTVTLEQNWSFELFSLINRVTDNESTRLVMTAKQSAAQTKVL
LPDLQSRFQWATGFQVQPLNDEEKINALILRAQWRGLELPNDVAAFMTQR
LGRSMRDLMKALNELDKASITYQRRLTIPFVKQVLEI
>IL0323 NTP pyrophosphohydrolase, NUDIX family
MTWNRCMSKEKQVPQILARRVVAQSRLMRIEAVDLKFSNGEQRQFERMKG
SGRGAVMIVPCLDEETLLLIREYAAGLHDYQLGFPKGLIDPGETPEEAAQ
RELKEEVGYGSRQLEFLMEVSLAPQFFSAKMSVFVARDLYPESLPGDEPE
PLEKVTWPLNDIDNLLAQPDFSEARSVAALLMLLRNLSEAQ
>IL2606 Hypothetical protein
MDKILVIDDDNKKRSEVVSNLRRQLQQDSVEVVEVDDSVCETLLKPSEKV
GANNSTEKQFERYLTDNPDIKLVVVDHDLSGYNSKLSESVVSDACKLAGV
PHCRYSRVMSKQTPRQRIKELVQRAHLYSAKLDLKGTGNEDIELIPEDIV
RIHSIYLGFEELRERINKLEKQDFVNEDNTRKDIVDIATEILDKDDMEPI
LSGYARSFNLYGDYVELLEAIDNENSDEDSVILKFKTGLAYLIGFWLYNS
VLKFPGVILKSEAAASYLDLNYDDFIENKQQFNSALYTGPFSQKTKYEFW
WRFDLDDILIDEEVDSGYQLLLKKGIECKQSACLECGESAGYFCLVKEAP
VCKKHSIGALDWMPRGADLSRIATEAYELYHPYLESKN
>IL2054 ATP-dependent DNA ligase
MPKLSRIHLVYLVAFFIAAFCTLPAAAWQNSTQTQLAKVYEQDNTIPISN
YLVSEKYDGIRAIWTGSQLLTRQGNLISAPEWFTAPLPAVWLDGELWTKR
QNFEALSSIVRTQTPKDNRWRKVKYMVFDMPDAQLPFEERYKNYSKLIEQ
VNAEHIKAVQQQRFHSNHELSEHLQAMVDQGAEGLMLHLATALHQSGRSD
ALLKLKPYFDEEAEVIAHLPGKGKYTDMLGALRVRNQQGIEFSVGTGFTD
AERANPPPVGSIITYKYHGYTSNGVPRFASFLRIREVVEGE
>gid:302901    Il-IS_1, transposase
MAIVNRIALDLAKDFIQVLALDENEQEVFNKKLRSNKVLAKLATLSRTDD
CEVAVESCGMSHYWRRECEKLGYKTVALPPRFVKAYLQGEKNDANDARAI
AEAASRPNRQTVRLKSIEQQDLALMVNQREGFVQTRTQFSNRLRGQLAEY
GILLPKRVGTILQRVPEVLEDDSNALTLQSRDLINRLYQMLRAVDEEVKA
LDKHLATQAERNEDSQRLMTLPGIGPITATSLLALIGDVSEFKRGRNLSE
YLGLVPRQNSSGGKDRLGGITKKGNTKLRTLLVHGARSALRVAQQRHDRL
SLWAQDVAKRRGNNVAAVALANKHARIIWAMLKNKEDYRMTAA
>gid:302975    Il-IS_1, transposase
MAIVNRIALDLAKDFIQVLALDENEQEVFNKKLRSNKVLAKLATLSRTDD
CEVAVESCGMSHYWRRECEKLGYKTVALPPRFVKAYLQGEKNDANDARAI
AEAASRPNRQTVRLKSIEQQDLALMVNQREGFVQTRTQFSNRLRGQLAEY
GILLPKRVGTILQRVPEVLEDDSNALTLQSRDLINRLYQMLRAVDEEVKA
LDKHLATQAERNEDSQRLMTLPGIGPITATSLLALIGDVSEFKRGRNLSE
YLGLVPRQNSSGGKDRLGGITKKGNTKLRTLLVHGARSALRVAQQRHDRL
SLWAQDVAKRRGNNVAAVALANKHARIIWAMLKNKEDYRMTAA
>gid:303668    Il-IS_2, transposase
MTELPDNILHMPQYQVLGCKSTDDEMHFQVDAPDPVACEECGVQGEFVRF
GKRDVPYRDLPIHGKRVTLWVVRRRYTCRACKTTFRPQLPEMVDGFRMTL
RLHEYVDKESFNHPYTFVAAQTGLDEKTVRDIFNARAEFLGRWHRFETPR
ILGIDELYLNKRYRCILTNIEERTLLDLLATRRQDVVTNYLMKLKDRQKV
EIVSMDMWNPYRAAVKAVLPQARIVVDKFHVVRMANDALERVRKGLRKEL
KPSQSRTLKGDRKILLKRAHEVSDRERLIMETWTGAFPQLLAAYEHKERF
YGIWDATTRLQAEAALDEWIATIPKGQKEVWSDLVRAVGNWREETMTYFE
TDMPVTNAYTESINRLAKDKNREGRGYSFEVMRARMLYTTKHKKKAPTAK
VSPFYKKTIGYGLPDFAEELNYGVDLSTI
>IL1420 3'-5' exonuclease/DnaQ family enzyme
MLYLAPENKQKQKPRKSKNIDWPKQFETLEQLSHSQALKRYYSQGISSPD
TPINKTPMVAVDFETTGLDPEQHGIVSIAAIPMTTERILFSEAKSWVVKP
RRSLTDESVVIHGITHSEIEHAPDLESIIDELLELVAGKVWVVHYHGIER
PFLQRGIKERLHENIQFPLIDTMEIEARFHRKPLSFWQKLLGKKPESIRL
ADSRTRYNLPFYPPHNALTDALACAELLQAQIAYHFEPDTPLGEIWLP
>IL2219 Predicted endonuclease
MSTVIGFDFGTKSIGVAVGQTITATASPLAAITAKEGIPDWQLIEKLFAE
WQPEQLVVGLPLNMDGTEQPLTQKAKKFGNRLHGRFGLPVAFQDERLTST
SARESLFAEGGFRKLKKGAVDSQAALIIVEDFMNGYLPKSDNSL
>IL0646 Integrase/recombinase, XerC/XerD family
MAEVQAVKNLDTVKLISYLLKRTYGQQIADVWDVGLNLALRISDLLSIKF
ENIEHDRLLLVEGKTSKLATIKLNEKARAVIARIRSERPDHIYLFQSYRN
QRSKNTPAKPLSRRYVSRAFAAIGEEVGIDLGTHSMRKTRGYHLYKNTND
IARVMKMLRHSSEAVTLRYIGITQEDVDRDFVELEL
>gid:304213    Il-IS_1, transposase
MAIVNRIALDLAKDFIQVLALDENEQEVFNKKLRSNKVLAKLATLSRTDD
CEVAVESCGMSHYWRRECEKLGYKTVALPPRFVKAYLQGEKNDANDARAI
AEAASRPNRQTVRLKSIEQQDLALMVNQREGFVQTRTQFSNRLRGQLAEY
GILLPKRVGTILQRVPEVLEDDSNALTLQSRDLINRLYQMLRAVDEEVKA
LDKHLATQAERNEDSQRLMTLPGIGPITATSLLALIGDVSEFKRGRNLSE
YLGLVPRQNSSGGKDRLGGITKKGNTKLRTLLVHGARSALRVAQQRHDRL
SLWAQDVAKRRGNNVAAVALANKHARIIWAMLKNKEDYRMTAA
>IL1076 IS4-like transposase
MFLSQALDQLQEFTPDDFSKLPDLLEPELIEQCLEDAGVTTVRKRRLPMD
FMVWAVVGMALFREMPMRQLVSHLDLMLPGKRPYVAPSAVVQARQRLGAN
VMKRMFELTNELWFDKLPLSHWNNLSVLAVDGTVWRTPDTPENDASYGRT
ANQRAESDYPQIRMVNQMEVSSHLVTSTEFGSIAEVSEVDLAARLIEQTP
DHSLTLFDKGFYALGLLDQWHRAGEERHWLIPLRKGAQYSVKKSFSDTDK
LVEIRLSPQAKKKWDNAPDTVQARLVCKKIAKKEVAILTSMTDTMRYPEA
DIVDLYAHRWEIEQAYREMKQYMLKSELTLRSKRPDLVEQELWGMLVAYN
LLRYMMAQMAYSLKHIEPNQISFKQASHYLVGQLHILVHISPGKIPKVME
QMMEMASAFVLPERRERYYPRSIKRRPQRYPMRPPSKPTAS
>IL0508 Transposase related protein
MRTHPFEIEAWVVMPDHLHCVLRIMDTNAPVRWSKIKALTSKALPEFSAK
NYSKHYKNKSRQKRQLSSLWQKGYWEHTIRNEKELYMYLLYCCYNPVKHR
YVSNATEWPYSTLNRYLRNNRYPPDWAYINESWVDSNLAAYDP
>IL1878 Mg-dependent DNase homolog
MNTLYDTHCHIDFQAFDEDREQVLEAAAEAGVERFMVPGVSAEQWPRLQQ
LVNQFASWRFALGLHPWFIQQHNLNHLQELEQALDTPHERLRAVGEVGLD
ATCDNSELQRELFIEQLKLAKNYRLPVIIHHRKTLETTHPLVKQYGPEQG
VIHAFSGSYEQAMKFVDCGYKLGVGGVITYTRAQKTRQAIAKVPLSALVL
ETDSPDMPICGHQGERNEPARIAKVLSVLAELRKVDKDSLSEALWKNSCE
LFNEAQPASNDHVSG
>IL2204 Serine/threonine protein kinase
MAEVHPDNNFPYPIPARYQSIKLLGQGGSGLVYKAYDQRLKRTVAIKFAR
SPSIVSRHRLVNEARLLSSVDHPALCRVFDVGEPEVSSSSLFMVLEYIEG
KPLSKQRSCLSVYDAAKVVKSLTDGVCRMHEAGYAHNDITAQNIMIRSAD
NAEGESNNSAVLVDLSIAAPSSPTTIKRDIYQLGALLLSLLTNMKPEHFF
QHPITHRNRLPAELSRIVKKALSAEPNEGFQHCRELQQELDGWLRNYQLR
KRFFWLGAGGAAILVIIFVLFIFLREQTNRHLLDGYSVEQNQYAHALVFA
HYSRHLANGGQLQQAAEQAELALTHFDDAVASSPELLKYHSERAHFVLSS
DNIFTRSQRTTMLLNAINELGNPDIYEEKAAAHYLRAEMYLGLAELNSEQ
PHLVERWKASALSSVEAAIKHQPDVDRYQQLRTEIDKSQSSAGTD
>gid:302911    Il-IS_3, transposase
MTAYVGIDVSKKKLDVGFYSDKLGKNGQRKKKTKVFKNDRQAFSQLESWL
KQQTQHKAQNIAIGIEATGIYHEALIYTLHEQGFKLFIANPGRAKKYFES
LGVTHKTDKSDSLLLARFTEDKAHKGDITWWEPESPEARHLKLLLRRLNA
LQKDVLRERNRLEACANTDTSPRVVKSIEDMIAVLNEEIKALLKEIDDHI
DGHPQLKKNRELLESIDGVGPTVSRELTSLFSVKRFSSAKEAAAYLGLIP
RLQESGSHKGMTRLSKIGPSAIRALLYLPAVVASRCNPDIAYQKQRLLAQ
GKTKMQALGAAMRKLVQICFGVIKHQEEYRPQTSLSV
>gid:304721    Il-IS_1, transposase
MAIVNRIALDLAKDFIQVLALDENEQEVFNKKLRSNKVLAKLATLSRTDD
CEVAVESCGMSHYWRRECEKLGYKTVALPPRFVKAYLQGEKNDANDARAI
AEAASRPNRQTVRLKSIEQQDLALMVNQREGFVQTRTQFSNRLRGQLAEY
GILLPKRVGTILQRVPEVLEDDSNALTLQSRDLINRLYQMLRAVDEEVKA
LDKHLATQAERNEDSQRLMTLPGIGPITATSLLALIGDVSEFKRGRNLSE
YLGLVPRQNSSGGKDRLGGITKKGNTKLRTLLVHGARSALRVAQQRHDRL
SLWAQDVAKRRGNNVAAVALANKHARIIWAMLKNKEDYRMTAA
>IL1403 Uncharacterized conserved secreted protein
MKRSVLIFRSFGYALVALGLSACSDDQGLTEYADALHSRVQSTLKLPNNS
IEAPKPQLQYPGKRPLTRNIERRSMGLLESLRLNHCQLGQLIAENNSSLG
KLKDGFSRYHADLNMIQALKKCIEHPESTNVKDKLKEALVHKESQLQNSL
ANAFARDDGLRKALSVGNNSLPKIHVTEYNYAVNALERFTRILERWSYTK
EADAPDELIEMLGRLERSDYLPDLFRTMLDYSYKLEKMTELLPEVPKSVY
CQNGKVPDDALALKEAFNAIYLKEMQSDIAELIEQHQRLLMTLENLAGIA
PQPELKAYIAELGTLSKKLTDASVHFVRPWQKFYSACDFTPGLD
>IL1489 Uncharacterized conserved protein
MIDHDKFRALVKQLYATVNELEAMFPGRHFTPDGHMVGSLGECLVADAYD
LKLKAASNKGYDALTETGVEVEIKATQSSSVAFRSQPQHAIIIKILRDGT
FEEIYNGPGILVWEQFRGKRLPSNGQFQISLNKLRQLNQTLAPASRVPRA
M
>gid:305020    Il-IS_1, transposase
MAIVNRIALDLAKDFIQVLALDENEQEVFNKKLRSNKVLAKLATLSRTDD
CEVAVESCGMSHYWRRECEKLGYKTVALPPRFVKAYLQGEKNDANDARAI
AEAASRPNRQTVRLKSIEQQDLALMVNQREGFVQTRTQFSNRLRGQLAEY
GILLPKRVGTILQRVPEVLEDDSNALTLQSRDLINRLYQMLRAVDEEVKA
LDKHLATQAERNEDSQRLMTLPGIGPITATSLLALIGDVSEFKRGRNLSE
YLGLVPRQNSSGGKDRLGGITKKGNTKLRTLLVHGARSALRVAQQRHDRL
SLWAQDVAKRRGNNVAAVALANKHARIIWAMLKNKEDYRMTAA
>IL1806 IS4-like transposase
MFLSQALDQLQEFTPDDFSKLPDLLEPELIEQCLEDAGVTTVRKRRLPMD
FMVWAVVGMALFREMPMRQLVSHLDLMLPGKRPYVAPSAVVQARQRLGAN
VMKRMFELTNELWFDKLPLSHWNNLSVLAVDGTVWRTPDTPENDASYGRT
ANQRAESDYPQIRMVNQMEVSSHLVTSTEFGSIAEVSEVDLAARLIEQTP
DHSLTLFDKGFYALGLLDQWHRAGEERHWLIPLRKGAQYSVKKSFSDTDK
LVEIRLSPQAKKKWDNAPDTVQARLVCKKIAKKEVAILTSMTDTMRYPEA
DIVDLYAHRWEIEQAYREMKQYMLKSELTLRSKRPDLVEQELWGMLVAYN
LLRYMMAQMAYSLKHIEPNQISFKQASHYLVGQLHILVHISPGKIPKVME
QMMEMASAFVLPERRERYYPRSIKRRPQRYPMRPPSKPTAS
>IL1499 IS4-like transposase
MFLSQALDQLQEFTPDDFSKLPDLLEPELIEQCLEDAGVTTVRKRRLPMD
FMVWAVVGMALFREMPMRQLVSHLDLMLPGKRPYVAPSAVVQARQRLGAN
VMKRMFELTNELWFDKLPLSHWNNLSVLAVDGTVWRTPDTPENDASYGRT
ANQRAESDYPQIRMVNQMEVSSHLVTSTEFGSIAEVSEVDLAARLIEQTP
DHSLTLFDKGFYALGLLDQWHRAGEERHWLIPLRKGAQYSVKKSFSDTDK
LVEIRLSPQAKKKWDNAPDTVQARLVCKKIAKKEVAILTSMTDTMRYPEA
DIVDLYAHRWEIEQAYREMKQYMLKSELTLRSKRPDLVEQELWGMLVAYN
LLRYMMAQMAYSLKHIEPNQISFKQASHYLVGQLHILVHISPGKIPKVME
QMMEMASAFVLPERRERYYPRSIKRRPQRYPMRPPSKPTAS
>IL1613 Superfamily I DNA/RNA helicase
MFSLIVNGQDKTRQIADWKIFKGSEGQFVLKCIFRSDKAFFRSLEECEIT
PTEEVKDKLLITKNGSKVSTIESALIYANKYAIVHYPGSSEPYLMKMDAI
EFTDTANIKNGTVFNYFTSVTNARMNLAPSGEERDIAENIAKQLEKIEPY
PETALFSYCTGKSQQRAKPNGLVYPFGINLSQQQAVQQAFCSQVSIIEGP
PGTGKTQTILNILANIALRGEKAAILSNNNPAVENVYEKLEKSSLGYLAA
KLGSVQNRKDFFASLPMKPKEKPNQAKPLEDITSQIQRLEQLLSAQNEAS
KLRSQISELKIERKRLLGWQDKSIHKPIMQPNKYKLSPQKITDFIAYLTD
ISEKRITLWNRLELWLHFRILRTKLFNTWEKRKSVIHALQLLYYDYALQE
KTAALKTQEEILEQSNFKVLLETVTNSSMAYLKSSLFDQVSSHEDFDSEN
YRQNFHQFLQRFPIMGSSTHSIINSLDQGTILDFAIIDEASQQDIIPGIL
ALGCARNVIIVGDRKQLPHIPNQTGILPPSDMYDCEKHSLLESFTRVFSG
SIPITLLKEHYRCHPKIIQFCNQQFYNNELIPMRDDTAKNPLELIVTAKG
NHARGYSNKRELESLIKVQTENEGAGWDERNSKGFIAPYNAQVNLSRSHL
PTDFVRKTTHKFQGRECDEIVFSTVLDKKLSNQSERKITFVDNPNLVNVA
VSRAKEKFTLVTGDNVFTAGNSSIAALVRYMEYYGDQSSIYHAPVISSFD
LLYDEYDRSLEKLRTKLRPEDSQYKSEQIVAQELRQLLSDEKYREFTFHA
EVALIQLVSPNLEDLTQAELTFMRNLSRCDFVFYYRVGKQPLAVIEVDGG
HHNTPEQKRRDALKNSILEKAGLPLLRLNTDEAHVSRNISSFLDTLRQAC
DKPNDLELTG
>IL2087 Uncharacterized conserved protein
MAIPKVFISSTCFDLSEVREQLNKFVRSFGFDPILSEHGDVFYHPDLHTH
DACVHEVSNCQLFILIIGGRFGGGYVKDKSKSITNAEYEAAKAANVPVFT
YIRNSVLNNHHIYRENRNQKFIDKINFPAVEKQDDAENIFKFIDDVRRSP
VNNAFEGFSNFNDIEVHLRKQWAGLFFEFLRTREVKTQIDATNHLLSNLK
DSNGKLEALVKSLYRSSSADEAKVEESISEIETYANTKKFFAEIFNLDDE
MPITIELDAFIGDTEINKIASVTPENKSWVDYLLETGLFYESDFGVEENE
PHLMFTTGKYCFGVEGYVKNKRPLYVNYEKGVLKSTKEQRVKILNELLK
>gid:304619    Il-IS_1, transposase
MAIVNRIALDLAKDFIQVLALDENEQEVFNKKLRSNKVLAKLATLSRTDD
CEVAVESCGMSHYWRRECEKLGYKTVALPPRFVKAYLQGEKNDANDARAI
AEAASRPNRQTVRLKSIEQQDLALMVNQREGFVQTRTQFSNRLRGQLAEY
GILLPKRVGTILQRVPEVLEDDSNALTLQSRDLINRLYQMLRAVDEEVKA
LDKHLATQAERNEDSQRLMTLPGIGPITATSLLALIGDVSEFKRGRNLSE
YLGLVPRQNSSGGKDRLGGITKKGNTKLRTLLVHGARSALRVAQQRHDRL
SLWAQDVAKRRGNNVAAVALANKHARIIWAMLKNKEDYRMTAA
>gid:302875    Il-IS_1, transposase
MAIVNRIALDLAKDFIQVLALDENEQEVFNKKLRSNKVLAKLATLSRTDD
CEVAVESCGMSHYWRRECEKLGYKTVALPPRFVKAYLQGEKNDANDARAI
AEAASRPNRQTVRLKSIEQQDLALMVNQREGFVQTRTQFSNRLRGQLAEY
GILLPKRVGTILQRVPEVLEDDSNALTLQSRDLINRLYQMLRAVDEEVKA
LDKHLATQAERNEDSQRLMTLPGIGPITATSLLALIGDVSEFKRGRNLSE
YLGLVPRQNSSGGKDRLGGITKKGNTKLRTLLVHGARSALRVAQQRHDRL
SLWAQDVAKRRGNNVAAVALANKHARIIWAMLKNKEDYRMTAA
>IL1491 ATP-dependent RNA helicase
MNFSDLALSPETLTALSRQGYSESTPIQAEAIPLVLAGKDVMAAAQTGTG
KTTAFTAPLLELLKSNERAKANTARVLILTPTRELAAQVGENVANLSAGL
PLNYAVAFGGVKINPQMMKLRKGVDILVATPGRLLDLYKQNAVRFPKLEV
LVLDEADRMLDMGFIHDIKNIIKLLPAKRQTLLFSATFSDDIRALAKGLL
KSPVEISVALPNATAEPIEQTLYEVQKSQKLGLLLKLLKSLDLPQVLVFS
RTKQGANRLVKQLDKAGFSAAAIHSAKSQGARTKALADFKSAKVQMLIAT
DIASRGIDIEKLPYVINYDLPHVAEDYIHRIGRTGRAGQTGHAISLVTDE
DVAALKAIEELIGETIEQCKLE
>IL2598 Predicted secreted protein
MLTKAFFAPFLTASLLLISVSTTAQSVSQKTDMLPNKSNTPACKLLTEKD
VLDHIPTSEGVHIAEERAEQGYSTCVWVRNDLDPDLATKEPFQLTVSWDY
HDHESDNMGGYVLTQARRLGEPVLGIGDEAHWMQGAMPTLAVWYKEQSVA
IQLLGGEPQRKGSKILASKALRRIKAGNIAQTN
>gid:302989    Il-IS_1, transposase
MAIVNRIALDLAKDFIQVLALDENEQEVFNKKLRSNKVLAKLATLSRTDD
CEVAVESCGMSHYWRRECEKLGYKTVALPPRFVKAYLQGEKNDANDARAI
AEAASRPNRQTVRLKSIEQQDLALMVNQREGFVQTRTQFSNRLRGQLAEY
GILLPKRVGTILQRVPEVLEDDSNALTLQSRDLINRLYQMLRAVDEEVKA
LDKHLATQAERNEDSQRLMTLPGIGPITATSLLALIGDVSEFKRGRNLSE
YLGLVPRQNSSGGKDRLGGITKKGNTKLRTLLVHGARSALRVAQQRHDRL
SLWAQDVAKRRGNNVAAVALANKHARIIWAMLKNKEDYRMTAA
>IL1176 3'-5' exonuclease
MSQWLQKLAHWYDRRQKLKQPWQSLRYVALDIESTGLDPKKHQILSIAWM
SIHPPVMHLGNAQYHVFAHGQELELGQSPTIHGLTRQDFLHSSEPKQTFA
MLSRALNDAVLVCHHKGMDWRFLKHIEAQYGIPFKPLAIFDTLAFEKHKL
ERNPHQPIYGGQLALSACRKRYNLPDYHAHHALTDTVACAELFLAQCYGF
NMSKSPLNLLIKSID
>IL2499 Uracil-DNA glycosylase
MKWEEPPHWQQILRDVRACTLCEPELPLGARPVVQLHPKARILVAGQAPG
KRVHASGKPFDDPSGDRLRQWMGIDKDTFYNAEELAIIPMGFCYPGTGKS
GDLPPRPECAPTWREQILQQLPNLELILAIGQYAQQWHLQEPKRSLTERV
RDWRSYWPQLLPLPHPSPRNNIWMKRNPWFETEVIPELRQRVKELL
>IL0638 RadC family protein
MHKQITSDKSAEFNSERELLDKAYLLIQSRFKQGEGFTEPSMVKEFVQGS
YQQCSTEVAGLLLLDSQHRLIDNVEFEEGEELAASMVYREVLKVNAAAVI
VSYFSPSKELNHSDKEHELSTLKSALNLIDVSLLDCMLVTDEVVSLAERG
LL
>IL2307 NUDIX family pyrophosphohydrolases containing a Zn-finger
MATLYSKPAGDEPAWWFVVSSDHLFLDESGEVPFGCLQDLSFPDLNDYRV
VEIGELRERSCYLVMADYMDEQFIGGEFVPLRQLLTVDDMEKFAMAGRAR
QFSDFLNTHRFCGRCGARMQTIEWELAMHCNQCQHRCYPRVSPCIIVAIR
KGDKILLAQGKRHKPGLHSILAGFVEAGESLEQALEREVYEEAGIRVKNI
QYHLSQPWSFPHSLMMGYTADWAEGELHIDPHELVTGDWFAFDSLPDIPP
EGTIARTLIDLSQKR
>IL0636 RadC family protein
MHTLDKGCYSSANNEAERDVFHRASQILEERHLRGQEPYNPNVIKDFLTY
KLAHYEREVFSIIFLDEKGHFIEYRELFYGTINAASVYPREVVRAALETK
ASSLVLSHNHPSGEAEPSNADIRLTERLQKALAVIDVEVKDHIVVGKECV
SFSERGLL
>IL1227 Uncharacterized conserved membrane protein
MSEKKRSSQWRVWHRWLSLVFGLQMVIWTISGAYMVFFDLDYIHGDHLVQ
DVSQPLPEGTEVSDLDKLLTRYPETEKASLEARRLDGKLQPVYKLKSDKG
EFLVNAKSLERIEITQHHIEDLANRYYAQESADIESVVYMTDNPPTEISE
TLLPVWQVNYDDFGNTSLYLSETTGDLLVKRHTFWRGFDIVWMLHIMDYD
ERVDIETWWLKAFIIGTFILMITGIVLLLYTITFKRRPIGGAQ
>gid:304883    Il-IS_1, transposase
MAIVNRIALDLAKDFIQVLALDENEQEVFNKKLRSNKVLAKLATLSRTDD
CEVAVESCGMSHYWRRECEKLGYKTVALPPRFVKAYLQGEKNDANDARAI
AEAASRPNRQTVRLKSIEQQDLALMVNQREGFVQTRTQFSNRLRGQLAEY
GILLPKRVGTILQRVPEVLEDDSNALTLQSRDLINRLYQMLRAVDEEVKA
LDKHLATQAERNEDSQRLMTLPGIGPITATSLLALIGDVSEFKRGRNLSE
YLGLVPRQNSSGGKDRLGGITKKGNTKLRTLLVHGARSALRVAQQRHDRL
SLWAQDVAKRRGNNVAAVALANKHARIIWAMLKNKEDYRMTAA
>IL1914 IS4-like transposase
MFLSQALDQLQEFTPDDFSKLPDLLEPELIEQCLEDAGVTTVRKRRLPMD
FMVWAVVGMALFREMPMRQLVSHLDLMLPGKRPYVAPSAVVQARQRLGAN
VMKRMFELTNELWFDKLPLSHWNNLSVLAVDGTVWRTPDTPENDASYGRT
ANQRAESDYPQIRMVNQMEVSSHLVTSTEFGSIAEVSEVDLAARLIEQTP
DHSLTLFDKGFYALGLLDQWHRAGEERHWLIPLRKGAQYSVKKSFSDTDK
LVEIRLSPQAKKKWDNAPDTVQARLVCKKIAKKEVAILTSMTDTMRYPEA
DIVDLYAHRWEIEQAYREMKQYMLKSELTLRSKRPDLVEQELWGMLVAYN
LLRYMMAQMAYSLKHIEPNQISFKQASHYLVGQLHILVHISPGKIPKVME
QMMEMASAFVLPERRERYYPRSIKRRPQRYPMRPPSKPTAS
>gid:304920    Il-IS_1, transposase
MAIVNRIALDLAKDFIQVLALDENEQEVFNKKLRSNKVLAKLATLSRTDD
CEVAVESCGMSHYWRRECEKLGYKTVALPPRFVKAYLQGEKNDANDARAI
AEAASRPNRQTVRLKSIEQQDLALMVNQREGFVQTRTQFSNRLRGQLAEY
GILLPKRVGTILQRVPEVLEDDSNALTLQSRDLINRLYQMLRAVDEEVKA
LDKHLATQAERNEDSQRLMTLPGIGPITATSLLALIGDVSEFKRGRNLSE
YLGLVPRQNSSGGKDRLGGITKKGNTKLRTLLVHGARSALRVAQQRHDRL
SLWAQDVAKRRGNNVAAVALANKHARIIWAMLKNKEDYRMTAA
>gid:303021    Il-IS_3, transposase
MTAYVGIDVSKKKLDVGFYSDKLGKNGQRKKKTKVFKNDRQAFSQLESWL
KQQTQHKAQNIAIGIEATGIYHEALIYTLHEQGFKLFIANPGRAKKYFES
LGVTHKTDKSDSLLLARFTEDKAHKGDITWWEPESPEARHLKLLLRRLNA
LQKDVLRERNRLEACANTDTSPRVVKSIEDMIAVLNEEIKALLKEIDDHI
DGHPQLKKNRELLESIDGVGPTVSRELTSLFSVKRFSSAKEAAAYLGLIP
RLQESGSHKGMTRLSKIGPSAIRALLYLPAVVASRCNPDIAYQKQRLLAQ
GKTKMQALGAAMRKLVQICFGVIKHQEEYRPQTSLSV
>IL1631 Integrase/recombinase, XerC/XerD family
MAEVQAVKDLDTVKLISYLLKRTYGQQIADVWDVGLNLALRISDLLSIKF
ENIHDERLTLVEGKTSKQATIKLNDKARSIIGRIKEEHPEHIYLFQSYRN
QWSKGLDEAPISRRYVSRAFAAIGEEVGIKLGTHSMRKTRGYHLYKNTND
IARVMKMLRHSSEAVTLRYIGITQEDVDRDFAELEL
>IL0021 Zn-finger domain associated with topoisomerase type I
MSSDERCPRCERPLVIKHVGHNSFLGCTGYPDCDYKRGLREQSEIEPEDL
GVPCPECGQELQLKSGRYGLFVGCSGFPECEFVTEPNVEEEETIRCPECG
KGQLHQKTSRRGTVFYACDQYPKCEFTVNQPPVDETCPKCRYPLLVKKKT
AAGIRKVCPQKQCDYKSDAL
>IL0292 Uncharacterized conserved protein
MQNSNNVVGKQSSYDEPMNLPEERVKSFISHWYEQWLQAEAKSETEKNND
QGFDFGYWRDLMSAVDKAHFVAGSGSGSDNSFGPADYDPNNEKIIECDIQ
GDLAQLLTELHQDEGRPSNYHAYELKLDAEKDWKITRIHTLFHPPKSPVI
APEQHADILAMSSSAAPLMNKQENLNLNEQTLFQKNRRVTIPHLDEGETK
LEEVGKLQISSGILGILDFGYDIYRFEPLQRRVTPGEYLVETVTTHDRVA
GIRVKLSESEQAVKWYAANTPSGNGVYGVDAGNLAIFDVANLVELSHFRK
EKLFNEWSLEGKTELLSMTGQDDCVICTSGFGDGAYPAFWGVNEQDEVVS
LYIDFMILVQETENGSYESI
>gid:304091    Il-IS_1, transposase
MAIVNRIALDLAKDFIQVLALDENEQEVFNKKLRSNKVLAKLATLSRTDD
CEVAVESCGMSHYWRRECEKLGYKTVALPPRFVKAYLQGEKNDANDARAI
AEAASRPNRQTVRLKSIEQQDLALMVNQREGFVQTRTQFSNRLRGQLAEY
GILLPKRVGTILQRVPEVLEDDSNALTLQSRDLINRLYQMLRAVDEEVKA
LDKHLATQAERNEDSQRLMTLPGIGPITATSLLALIGDVSEFKRGRNLSE
YLGLVPRQNSSGGKDRLGGITKKGNTKLRTLLVHGARSALRVAQQRHDRL
SLWAQDVAKRRGNNVAAVALANKHARIIWAMLKNKEDYRMTAA
>IL0070 ada, O6-methylguanine-DNA methyltransferase
MSDYTRIEKAMTYMSGHVSSQPTLEDVAAHVHLSPFHFHRVFCKWAGTTP
KRFLQALTLERSKRMLKGESSLMDVSLSMGLSGGSRLYDHFVKLEAVTPG
EYKNEGQGVTIQYGVNETPFGKIFVAITPRGVCRIEFLGSRAVDEILTDL
CKDWPKAALVSNENATNYVANVLFSRLKDGQSNPLSLHVMGTNFQVAVWR
ALLRIPPGKLASYSQIANVLDCPGASRAVGNAVGANPVAMLIPCHRVIQK
SGALGRYRWGSAKKEMLQAWELLCEKPIEV
>IL0655 alkA, 3-methyladenine DNA glycosylase
MKTTPAIVRQHLIDTQPGIDLLLLQLPERGLLAASETPVIEALPRIIIRQ
MLSLKASATIIERAEQKAKALGVGRIAYIPAEELTGCGVSRSKAAAINSV
AHCHQTQPERIDAWSQMNSADLIKDVTQLKGIGPWTASILAMFHFAHEDL
FPIQDSSLRKAMSLLKDQDILIIPERAQPYRSYLACYLWDMLDQARL
>IL1249 alkB, Alkylated DNA repair protein
MSSLDLFANDGSEPLSTEISEQATLFHQFLLADDEALLNDIRGVLKQSPL
RHLATPAGHKMSVKSSSCGSYGWLSDKHGYRYQNIDPVTGQPWPDIPQSI
LVKATQVSRLAGFQNFQPDSCLINVYTPGAKMGLHQDKNEADFSKPIVSF
SFGLPITFMWGGFKRSDKYQKFSLQHADALVWGGKDRLRYHGVQQLKEAM
HPLTGRCRVNLTIRQAG
>IL1350 comEA, DNA uptake protein, DNA-binding
MKLKLISILVASSLFLAAGAQATPLSSLPNLSPLAQAEEVKTVNINTGSA
QEISAVLVGVGEKRAEQIIELREQLGGFTEVEQLLDVKGIGAKTLEKNRA
FITIKP
>IL0157 csgF, Curli production assembly/transport component, CsgF
MKLRWLFIGFLFTAVNAAATEIVYQPINPSFGGNPLNGNFLLQKAQTQNA
HSAPDSDRSFVDRFREALERNIINSLTRRIADGEIVEGLYDTGEYTVEVV
GQPDGSVIVYITHNGSGEQTVITMPSI
>IL2475 dam, DNA adenine methylase
MKKNRAFLKWAGGKYSLIEPITARLPQGKKLIEPFVGAGSVFLNTDYDSY
LLNDINQDLITLYQFVKRRPKTFIQDARKLFVDRNNQADAYYALRAAFNA
SSDPYFRSLLFLYMNRHGYNGLCRYNSKGIFNVPFGDYRKPYFPEKELEH
FAEKARKAKFICRPFEQVFRRARQGDVIYCDPPYAPLDQTSNFTSYATGG
FGLTDQDELARRAVQVAKKRHIPVLISNHDTDLTRALYKHADISSLSVSR
SISQKGDGRKPVAELLALYDSEVNKSNVVSLSNSLKKVGT
>IL1413 dbpA, ATP-dependent RNA helicase
MPINTPENISDNTSETSPELLHFNQLNLPPALLTRLDEIGYQQMTPVQSL
SLPVILNNTDAVVRADTGSGKTTAFALTLLAKLEAKSFSPQALVLCPTRE
LAHQVADEVRKLAKSMLNIKILTLCGGEPSRIQTNSLEHGAHVLVGTPGR
VLDHLEQRNVDLSMLTTLVLDEADRMLEMGFQDSLNAIVKHIPKTRQTLL
FSATYPKNIAALAEQVTTKARNIEAIQEQAKPQIEQLFYAMNNEDSAQLV
MNLLGDHQPENCLVFCNTKNEVKDIFNTLRANKFSVLALHGELEQKDRDQ
AIIQFSNGSARVLIATDVASRGLDIAELDLVISVNMAHDLDTHTHRIGRT
GRAGKEGVAITLIAEKDDYKMRLLEDTFAEPIQVKPAPALSNNRPLKANM
STIQVSGGKKDKLRPGDIVGALTKDNVLSADDIGKIKLESTFGFVAVNSR
LAKHALGLINNNKIKGKKFRAKVL
>IL1991 deaD, ATP-dependent RNA helicase
MSNTQTGLSFNDMALPSAVLEQLNAMQFLTPTPIQLQAIPALLEGQDVLG
EAQTGTGKTAAFGLPALAKIDASVKQTQVLVVTPTRELAIQVAEALEGFA
AKMRGVGVATVYGGAPFGPQVKALKQGTAIVVGTPGRLIDLLNKNVLQLD
GLKVGVLDEADEMLNMGFIEDIETILKAVPNTAQRALFSATMPNAIRKLA
KTFLKDPLNIQIEAIAREKATIKQKAWKVQGMTKMTALTRLLEVTPYQRA
LIFVRTRQDTMDVAELLQRNGFKAAPLSGDLNQAQREQTVSQLRSGHIEI
LVGTDVVARGLDVPEITHVINYDLPSDTESYVHRIGRTGRAGRTGEAILF
FRAKERHLLRHYERLTNAPVEFFEVPNANELSKYRQQQLLEKLQASLAPE
TASADKPKLEKLLGEWLEQSELSAEEIALALLAQHNEQRPLFLKEDRPVR
EARNERSERSGRNERSDRGDKRKPRAERGGRAADVDFETYKIQVGREHGA
RPGDIVGAIANEASMDSKYIGQIQLFDNHSLVQLPKGMPKDIMHVLKKAR
VRQQPMGLELSDEQVKRAPRPPRDRDARGGPKRNSGKGAARRFS
>IL1832 dinG, ATP-dependent DNA helicase
MATVLSVFKPTGELAQAITNFQPRAAQQQMAEAIAATVKKKGELVVEAET
GTGKTFAYLAPVLLGKGKAIVSTGTKNLQEQLFHRDLPMLRKVLAPEKVV
ALLKGRSNYLCLHRMEQATQQAGQFSKDIQNQLITVKRWATSTRSGDVGE
LNALAEDASVLPQVTSTQDNCLGRDCPVYEDCHLVKARKEAMEADIVVVN
HHLFFADMALKDTGFGELIPSVDTVVFDEAHQIPDIASQYFGETVSSRQL
TEMCEELQRLCMTELKDLSQASAMARTLLQTLKDWRLLFPRDPMRGNWRD
WRKKPDVAEVAERVQERLTLLTDVMKTAIGRNKDFDNLHERAEQHLYIWR
QLMDVDRTGYSFWFETTPRHVSLHQTPLSVAKTFGGYIKRNKMSWVFTSA
TLAVNGKFDYFTKRLGIDDADTLLLESPFDFAKQAKLCLPRYLPEANDPN
RHQMLTEIAEQCVKVNRGGTFLLFTSHRMLQQMASILRDRLDRDILVQGE
SGKTELLETFTKKGNAVLLGTSSFWEGVDVRGEALRCVIIDKLPFASPDD
PLLNARVEDARLRGVDAFSTIQLPQAIIALKQGAGRLIRDKDDSGVLIVC
DSRLVTRQYGKQFLSSLPAMSRTRDLNEALSFLAQVAEKDETNNDELISS
>IL0204 dinP, DinP
MAEIARKIALLDLDAFFASAEELRDPSLKTRPFAVGGGGERGVVATANYL
ARQFGVKSAMPGSHARRLCPQLTFIRPDGNYYRELSDKVLDILRELTPRI
EPASIDEFYLDLTHLEGFKGSATLAMDFVREQIKTLGITGSAGISNQKMV
AKIASEERKPDGQFVVRPAEVMDYIAALNLKQIPGVGPKSQQVLTNYGLT
TGKDIQNIELQQLQAILGDKAGYVLFERCHGRDRREVVTERIRKSVGVEQ
TLATDMRLESTAQAYVQDNLLPKLRQRMKITHWREQPIRSQTLKLKFSDF
TQTTVSRSAQFISPSLFYQLLDEAWQRGKGKGVRLLGISATLPDPNEQLQ
LELELD
>IL0001 dnaA, ATPase involved in DNA replication initiation
MNNSLWQQCAERLQSELPLQQFNTWIRPLQAKLNGETLTLFAPNIYSVDW
VRDKYLKTINTYLEALCDDKVPNVVLKVGEASPTQRDSGSPQRAAATRRK
TPNFSSGNTDVEVPFESNIHPEYTFDNFVEGKSNQLARAAAIQVAENPGG
VYNPLFVYGGTGLGKTHLLHAVGNGIMAHKKDAKVFYIRAERFVQDMVNS
IRNSSTNEFKRYYRSVDALLIDDIHFFANKKGSQEEFFHTFNALLEGNQQ
IIMTSDLYPKEIDGVEDRLKSRFGWGLTIAIEPPELETRVAILMRKADER
GLHMPHEVAFFIAKRLRSNVRELEGALNRVVANVQLTGRPITIDFVREAL
RDLIAAQEKLVTIDNIQKTVAEYYNIKLADILSKRRSRSVARPRQLAMAL
AKELTNHSLPEIGDAFGGRDHTTVLHACRKIQELKDAQHDIKEDYRNLIR
TLSS
>IL1933 dnaB, Replicative DNA helicase
MAEKSKKRDASIEALRSAPHSIEAEQSVLGGLMLDNDAWDNVAGSVIAED
FYHRSHRLIFKAMHELAQRSQPMDLVTVSENLETAGELEQIGGFAYLGEI
AKNTPSAANILAYANIVRERAVLREMIGAANDIAESGYDTQGRSSAELLD
LAESKVFQIAEKRVSSSEGPQGINLILQRTVSRIEQLSKLKNNNGVTGVS
TGFTDLDQMTAGLQPSDLVIVAARPSMGKTTFAMNLAENIALNDDRPVLV
FSLEMPAEQLMMRMLASLSRVDQNKVRTGKLEDDDWARIASVMNMLNDKN
NIYIDDSSGLTPTEVRSRARRIHREHKGISMIMVDYLQLMTVPGMSENRT
LEIAEISRSLKSLAKELEVPVVALSQLNRSLEQRSDKRPVNSDLRESGSI
EQDADVIMFIYRDEVYHPDSAEQGLAEIIIGKQRNGPIGKIELKFHGQLS
RFDNYARHASDERY
>IL1689 dnaE_1, DNA polymerase III alpha subunit
MIDGLAKVGPICEAVAEAGMPALAITDQMNFCGLVRYYGKAHQLGLKPLI
GCDFWVQADYPESEIFRLTALAMDNEGYQQITQLISKAYLRGNIKGKPVI
DKDWLKEHNEGIILLSGSRQGDVGQALIKGHDSQLDAALDFYQQYFPDRY
YLELVRTGRPQEENYLHKAVALAGETGLPVVATNEVVFLKEEDFDAHEIR
VAIHDGYQLEDKRRPKKYSPQQYLRSSEEMSELFSDIPEAIENTVEIAKR
CNVTVRLGEYFLPKFPTGDLTTEEFLIKVSEEGLEERLEFLFPDAEEREQ
KRPEYDERLKRELGVINDMGFPGYFLIVMEFIQWSKDNGIPVGPGRGSGA
GSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMDRRDEVID
HVADLYGREAVSQIITFGTMAAKAAIRDVGRVLAHPYGFVDRISKLIPGD
PGMTLAKAFEIEPQLGAAYDQDEEVKAIIDMARILEGVTRNAGKHAGGVV
ISPTKITDFSPLYCDDEGNNPVTQFDKDDVESAGLVKFDFLGLRTLTIIQ
WAVDMVNRRHAKSGKDPIDITSIDLTDPACFKLLKKAETTAVFQLESRGM
KELIKKLLPDSFEDIIALVALFRPGPLQSGMVDNFIDRKHGREEISYPDA
EYQHESLQPILEPTYGVILYQEQVMQIAQVLAGYTLGGADLLRRAMGKKK
PEEMAKQREIFAKGAAQNNIDPELATKIFDLVEKFAGYGFNKSHSAAYAL
VSYQTLWMKTHFPAEFMAAVMSADMDNTDKIVTLADECERMGLDLLPPDV
NKGEYKFTVDEQQRVVYGIGAIKGVGEAPIESIIKARQEGGPFRDLFDFC
CRVDLKRMNKRILQRLIRAGAMDNLGPHRASLMATLEKAIRQAEQHLNAE
KIGQSDMFGVLTTEPEAVEQEFVSVRKWSEAVWLEGERDTLGLYLTGHPI
NRFRAELKHYINSTLSNVTPTRKDESIAIAGLVIDVRVLTNKRGQRFAIV
TLDDKTARMDVRLFSNEYESYQELLEKDRILWIKGEVRFDNFSNSNTMTA
REVMAIEQARETYLRHLAITVTDEQLAKGLAGKLEKLLQPFAEGTCPIKM
RYQSERVEATLNVGAQWYVNPSDELIYELQNLLGTQQVSLEF
>IL2566 dnaE_2, DNA polymerase III alpha subunit
MAGSADISKGCSGQLFAELHSLSHYSFLRSAASPEELVRRADDLGYAAIA
ITDECSVAGIVKAYQESKARDIKLVVGSEFRVPEVGTLVVLAPTREAYAE
LCKKITLFRSRSEKGHYQANIDDFFDGFSQCLLLWQPDFSQAQLLAIGEK
LKSVWQQRFWLLYERHYQADDERAFQAMVELQQAVKVKVTCAGGVCMATI
EQQPLYDILNAIQHGGSLAHQPGLASNNAEHHLRSLSELQQCYPQKWLAE
TLVIAQQCQFCLSELRYEYPAELVPEGMSASGYLKQLTEQGARWRYPQGV
PESIKALYLKELSLIKEQSYEPFFLTIHDLVRFAREQGILFQGRGSAANS
VVCYCLGITAVNPAQIQVLFERFISKERNEPPDIDVDFEHERREEVIQYI
YRKYGRQRAALAATVITYRFKSAFRDVGKALGFSEQQLQYFRRNLDRRDK
EQSWQQQLVQQHPEVTNSVRGQHLLQFTEQLMGTPRHLSQHVGGFVIAAD
DLSRLVPVENASMTDRTVIQWDKTDLESLGLLKVDVLALGMLTALRKMLA
LINLRYDQQLTMATIPQEDSRVYQQLQTADSMGIFQIESRAQMNMLPRLK
PKTFYDLVIQIAIVRPGPIQGDMVHPFLRRRAGLEEVDYPSDEVKSVLER
TLGVPIFQEQVIKLAMVAAGFSGGEADQLRRAMASWGQNGHLTRFEDKLI
NGMLERGYKQEFAERLFRQICGFGQYGFPESHSASFANLAYVSSWFKTYH
PAAFYVGLLNSLPMGFYSASQLVQDAQRHGVAFLAADINASDWNYCWLPK
EDTNSDETVRMGLRQIQGLSESRIKHTLMQRPEDGFTSMHELRKSGLRDS
DINALARADALKSIAGHRHQAHWQSLSMSDQQMPLFENVKDRPARQLPAP
DEPDNIKADYESTGLTLGRHPLALLRNNPELKNCVLASDLMTCRSGQVLT
LAGLVTCRQRPGTRSGVTFLTLEDESGNSNVVVWANTARQFRQCFLTSNL
LWVKGIVEIHDGVVHVIAGRLKDLSGLLSFTRLESRRFH
>IL2201 dnaG, DNA primase
MAGLIPKSFIHDLLERADIVEIVDSRVPLKKAGRNHQACCPFHNEKTPSF
TVSQDKQFYHCFGCGEHGNAIDFLMEFDGLNFPDAVEELAGIMGVEVPRE
QPENPQLAQKKQQQMQDDSELMSKTARFFQHQLKHHENSNRVIDYLKGRG
LSGETVKRFQIGYAPDAWDGLLSTFGSSAPQRQQLLELKLINRNEKGRHY
DFFRDRVMFPIHDRRGRVVGFGGRIIDGDGPKYLNSPETRLFHKGSELYG
YWHMQQAVRKPEQVCIVEGYMDVVALSEAGIHYAVASLGTATTSEQLQRL
FRTSGRIVCCYDGDRAGRDAAWRALENALPLLRDGLDMAFLFLPEGEDPD
SVVREHGAEAFERELKKATPFTEYFFEHLQADIDVSSDAGRSQLLNIAKP
LIEKVASEYYRDTLMQRLAEKLRRETSQLERQFEKPQRQSRPKESVKMTP
LRKAIALLLQYPQLAQSVPVREELRELQVSGIDLLIALHKQCAERQMTTA
QVLEGWRDTEYYQPLQKLALWQHQLDEDNVEQEFNDIFIYLIDQYFEQRA
NALLKKEQEGALTRVERQEYQTLIQYLSKAR
>IL0002 dnaN, DNA polymerase sliding clamp subunit
MKFSINRDAFLKPLQVVSGAVERRHTLPILSNLLLQVDNGQLKLTGTDLE
VELVSAVPLESADMDAAVTVPAKKLLDIVRSLPEGSTIEFTSQEDSATVK
SGRSKFKLSTLSSDDFPNIDDWKSDIHLVTEQAVLKDLMLKTHFSMANQD
VRYYLNGMLFETDNGMLRSVATDGHRLAMSTCAIDQPGLAQRQVIVPRKG
VVELLRLLGDDDQEVSVSIGNNHIRVETPELVFTSKLVDGRFPDYRRVLP
SGGDKVIVAHRDALRQSFGRASILSNEKFRGVRLNLSSGELCITATNPEQ
EQAEEVIEVDYQGDDLEIGFNVSYLLDVLNNIDDEQVSFTLSDSNSSALI
EPQHDESCCYVIMPMRL
>IL1693 dnaQ, DNA polymerase III, epsilon subunit
MRQVVLDTETTGIDPAKGHRIIEIGCVELINRKLTGNHFHVYINPERVVE
QEAIEVHGITNDFLTDKPVFAQVVQDFIEFIKGSQLVIHNAPFDVGFMDA
EFSRIRPAVGLTNDFCSVLDTLQLAREMRPGQRNSLDALCRAYDVDNSAR
ELHGALLDAEILADVYLMMTGGQTALNLASHGKDNQGGSQKVEHQRITNR
PALKVLRATADEEALHQERLARVKEEGGHCLWQDS
>IL1849 dnaX, DNA polymerase III, gamma/tau subunits
MSYQVLARKWRPSQFAEVVGQQHVLKPLEHALDKQRLHHAYLFTGTRGVG
KTTIARILAKALNCEEGITATPCGKCSACLEIEQGRFVDLLEIDAASRTK
VEDTRELLDNVQYRPTRGRYKVYLIDEVHMLSRHSFNALLKTLEEPPEHV
KFLLATTDPQKLPVTILSRCLQFNLKALSNDDITQQLSYVLSQEQVQADS
EALPLLARSARGSMRDALSLTDQAIAQGGGSVSIDSVRRMLGNVPVADIA
ALLESVLEGDAEAVMQRVDSMVSMVPDLSSVLVELQSLLHQLALVQQVPS
AANVFENSDVLKPLLRRMPAELIQVFYRTVLEGRREQAYAIDARSGLEMT
LLRLLCFRPAEKGDYNITEPDSSAVDMPESKLTAPAQEVTETEAGSVAEV
TPQAGPEPQPEAELSEPMQPSYSEHEEPPEFNYSEPDDDAGFYHNDAPPY
HMEEAAKSEPVPEPTADQTAEPTPEPAAQSSSGVADLLRVREQLAEKKNP
DNSNKTLNSQTENSSPVALTVPAEAEPEAQPEHQPESKDELNEELPELND
DIREAAEVDKWSAMIAGMDISGLARQVLLNSELQKLGDDDWLILVAEEQK
SLLNESTSQAVRESLAGLLGATARVDFKVGVPSQPTPLMVQQHINEYRHQ
RACEILHGDAGVQDLQQRFQAQIDESSIQAR
>IL2289 fis, Factor for inversion stimulation Fis, transcriptional activator
MFDQNPSRENVSPLTTIGNNAQPKPLRDSVKQALNSFLRQLDGQDPEELY
ELVLSEVEAPLLEEVMTYTRGNQTRAATMLGINRGTLRKKLKKYGMN
>IL1360 gyrA, DNA gyrase subunit A
MSELRNDFNKPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQNFSLRYM
LVDGQGNFGSVDGDSAAAMRYTEIRMAKIAHQLLADLDKETVDFVDNYDG
TERIPDVLPTRVPNLLVNGSSGIAVGMATNIPPHNLTEVVDGALAMIDNP
DIDVEGLMEYIPGPDFPTAATISGRSGIVEAYKTGRGRIHLRAQAEIEVD
EKTGKETIIVTEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDGM
RIVIEIRRGDVGEVVLNHLYANTQLQVVFGINMVALDKGQPRLFNLRDML
DCFVRHRREVVTRRSVYELRKARERAHILEGLAISLANIDEIIELIRRSP
TPAEAKAGLIARAWQLGDVAAMLETAGVDAARPDHLPEEYGIRDGNYHLT
EEQAQAILDLRLHKLTGLEHEKILDEYKGLLEQIAELLHILNSSERLMEV
IREELVEIRNNFGDERKTDITAAAHDISMEDLINEEDVVLTLSHEGYVKY
QPLTEYEAQRRGGKGKAATKMKDEDFIERLWVANTHDTILCFSTRGRIYW
MKVYQLPLASRASRGKPIVNLLPLEADERITAILPTRDYPEDKFVVMATR
KGTIKKTPLPEYSRPRNGGIIALNLVDDDELIGVDITDGNGEIMLFSDAG
KVVRFAEEQVRSMGRTATGVRGIRLEEGQRVVSLIVPREYEEEEANVLTV
TENGYGKRTPLSEYPAKSRATKGVVSIKVSERNGSVVGAMEVIDGNEIML
ISNKGTLVRTRVNEVSTVGRNTQGVRLIRTADDEKVVGLQRIDEIDEDEV
LIDGEVVAEEGETAAEDNTENQEGSDES
>IL0004 gyrB, DNA gyrase subunit B
MEENNYGSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNSID
EALAGHCSEIMVTIHSDGSVSVKDDGRGIPVDIHEEEGVSAAQVIMTVLH
AGGKFDDNSYKVSGGLHGVGISVVNALSEKLQLTIRRQGQVYEQTYHMGE
PDSDVKPVGDTDTTGTELRFWPSHETFTDTEFHYDILAKRLRELSFLNSG
VGIRLRDERDDREDLFKYEGGIAAFVNYLNKNKTPIHEKAFYFTTQREDG
IGVEVSMQWNDSFQENIYCFTNNIPQRDGGTHLAGFRAALTRTLNSHMEK
EGYNKKSKTSATGDDAREGLTAIISVKVPDPKFSSQTKDKLVSSEVKSAV
EQAMNEQLADYLLENPGEAKLIINKIIDAARAREAARKAREMTRRKGALD
IAGLPGKLADCQEKDPALSELYIVEGDSAGGSAKQGRNRKNQAILPLKGK
ILNVEKARFDKMLSSVEVGTLITAMGCGIGRDEYNPDKTRYHRIIIMTDA
DVDGSHIRTLLLTFFYRQMPEIIERGYIYIAQPPLYKVKKGKQEVYIKDD
PALIRYLTSLALDNASLHVNETAPGISGEKLENLVNGYQMAQENIKRLSR
RMPERFLQRLFYAPRLTDERLKDKDYMEKWVKTLNDDLTAREINSATYTV
SLHEDTERKMWLPSTTIRQHGVDTDYPLNYEFLMSKDYEQIVTLGEEIDS
LVEPDGYVLRGEKKQPVTHFVEAVEWLIGESKRGLYVQRYKGLGEMNPDQ
LWETTMDPDTRRMLQVTIEDAIGADQLFTTLMGDEVEPRRAFIESNALKV
ANLDV
>IL2223 hepA, Probable ATP-dependent RNA helicase HepA
MSEFRVGQRYLSETETELGLGMITQAEGRHLTVMFPATGEVRLYSAQEAP
LARYQLQVQQQGKHADGWSFTIQELTESQGIVTYHGLRDDNQESVVVPET
QLSHQVDSNPALTRLLAGQADRLDMYQLRCEASEHLAHHQASEVAGLLGV
RTHLLPHQLYIAKTVADRYHPRVLLADEVGLGKTIEAGMIIKRRLNTGRS
QRVLIVVPESLMHQWLVELRRRFALNFTLFDDERCEQAEADSENPFLTEQ
HIIISSRFMHESRWSESLLKAEFDLLVIDEAHHLQPEAPEFSAVKNLCEA
VPGLLLLTATPEQEGAEGHFQRLQLLDPDRFSDFASFQQEQTQYKELAEQ
AESVTDPAELDDLLDKHGTGRVMFRNRRADIGGFPERHFHPVELDECEPD
EDMPWWMEDPRIDWLLNHIKQNRSEKALLICKTAEQVLDLSEALRVLAGV
QAATFHEGMTLTERDRSAAFFASEEDGSPILLCSEIGSEGRNFQFVHQLI
LFDLPSNPDLLEQRIGRLDRIGQQQNIDIYLPYCKGSAEAILLPWYEQGM
NAFSQCNAIGRKLYDAFGTDIEQAVAEQEPLSDELLKQTKELHETWLERN
REGQDKLQALNACRPETAEKIIEQIHSDSDTDTLADFMIAFFDRFGVNNE
VLDEERWFIRPGEHMRVGSLPGLPDDGITITFDRVTALNFEDTDFLSWDH
PMVQAALELLTADDFGSTCVAELKNPAIPAGTWFLELDFASIVPAPKAAA
LQEFCPLQSLRLLFNGQGQELSAKVSRELLDQQSSFIDKKTARQILRQLR
DPAQKIIQSGQQQAREWQQKQLDKVKQNALDALQHERTRLLELRKKNPSV
RSSEIEAINWREEQITAALESPQLSLQAVRILVNNH
>IL1393 himA, Bacterial nucleoid DNA-binding protein, IHF alpha subunit
MALTKAELAEVLFDKYGVSKQDAKVLVEDFFEEIRVALERGEQVKLSGFG
NFELRTKNQRPGRNPKTGEEIPISARRVVTFKPGQKFKSRVENAEPED
>IL1354 himD, Bacterial nucleoid DNA-binding protein, IHF beta subunit
MTKSELIERLTLKHELPPKQVEASVKEILEQMVQSLSQGKRVEIRGFGSF
SLHYRAPRVGRNPKTGDPVELDGKYVPHFKAGKELRERVDTLS
>IL0949 holA, DNA polymerase III, delta subunit
MQTIYPEKLEHFLQHNGIPPVLLVFGDDLLLRNDALASIRKSLASDDLER
VHWLQSKDFDWQQLSAGEQSMSLFGNMRLVELELPENKPGRDGSAALTEY
AKNQADSEILVVIGDRLKKETQNSRWFKALAERGPLVRTQSPDKSQLPAF
IHQRAQRYQLILAAGVPEKLSDWFEGNLLALDQELSKWQLLSNDGVITED
FLKSSIDDVSRFSVFALQESIQQQDFEGALHRLERLLDEENDFHRLIWIL
QREVQLLTALQKAKQTQTDTNALFRQFMIWPNQQPGYHQRANQLSQQTLL
SAQQLIERIEAALKLDSGESPLTLTTHLLSLLCCNNANAINDGLSVFNHG
IEPNEKFIQL
>IL1335 holB, DNA polymerase III, delta prime subunit, ATPase
MAFPWLREPWLRLVASAEAGRLAHAYYLQHNVEGGSTEFIQRLNQFLLCK
QPGKSACGKCKSCLLYLSGNHPDTWTIDGAQVNRIGVDTVRELQQNVTQT
ANQNGLKVAVILEAEKMTEQAGNALLKVLEEPPADTHWLVSTKDAERLLP
TLRSRMQWLSIAYPTTAQSDEQVTFAKQLLAGLRGQQELPLLKDKDGALS
WLDVSENLLMDWLLISQRAAATRLRYQQLADELQHISNYEWVNVAQLSEW
VSECRQLRQRYQGSTGINLPLLLSFAWSRWSNTLSA
>IL1949 holC, DNA polymerase III chi subunit
MSSATFFLMPDEAEDEQNRLICDKIAQLYRKHKKLRVWARNQQQAEALDE
LLWQQPSDAFIPHNLHGEGPATGAPVEFCWPEADAVKNRPGYALFNLAEE
IPVQAQQSQQLYDIVPADDNGKKTARERYKHYRARGCQMQTEPLTSEQK
>IL1367 hrpA, Helicase, ATP-dependent
MSRQKSHDKSQSQPFVDKFQTQLEQCTTQQAALLRGRLRGLSKIKNEQRQ
QQVLERIAADIETAELAYLERQQQKFHISYPEELPVAQQRGDIKTAIEQN
QVVVIAGETGSGKTTQLPKMLLELGYGRKGTIGHTQPRRLAARSVAARIG
DELQDHAKKQVGYKIRFQDETAPTTAIKLMTDGMLLSELQQDPLLLQYDA
IIIDEAHERSLNIDFLLGVLHTLLPKRRDLKVVITSATIETERFSKHFHD
APVLTVTGRTYPVEVRYRPPKEDGKAADEDVLQGVCEAVEELQRESEGDI
LIFASGEREIRDYADAIGDLQLRNTEVLPLYARLSSHEQNRVFQSHSQRR
VVIATNVAETSLTVPGIRFVIDPGTVRMSRYSYRTKVQRLPIEPISQASA
NQRKGRCGRIGPGICIRLYSEEDFLQRPEYTDPEILRTNLAAVILQMSSL
RLGDIRQFPFVQKPDERFVKDGLNLLEELHAIKPGRKNEQPKLTDTGRQL
SRLPLDPRLARMVIAGQQYGCVREMLIITAALSIQDPRERPHDAQQKADE
WHQRFRDKSSDFMAFLNLWNYVKEQQKALSGNQFRKQMGREFIHFMRLRE
WQDIYTQSRQTVREMGLSINEEPATFEQVHRALITGLLSQVGFKEDRHEY
QGTRQTRFHIFPGSGLFGKPPKWVVTAELAETSKLYARINADIDPLWIEE
AAPHLVKKQYLEPHFEKKQGSVIADEQVTLLGLILVPRRRVQFGPVSPVK
AREIFIREGLVNSQLTRKLPFIQHNLKLIEDVQVLEAKSRRRDILVDEEV
LFEAYDRAIPEGIYNEKLLAGWWHKAAKKEPKLLFFERDDLIAGETEHIT
ENEYPEFWRQDNLRLPLSYHFEPNAEDDGVSVNIQLGILNQVKPEGFDWH
IPALREERIAHLIKSLPKTLRRNFVPAPNFAGAIIADIEPLQGRLTDAMA
TKLRRMTGVTVPEESWDESSLPDHLRMNFKILDGKKLVNQGRDLQSLQQQ
LSGKVQQRLEKTAGDDISRERVDSWDFDDLPEIITERQQGFELKAYPGLI
NKGKGQVALQLFDNPEQAKKHHKAGVRELLLQQIPSPIKHLQKSLSNKAK
LTMYFNPWGKVDALIADCIAAAVDGLIQEQIEQGNELREQKGFEQLKDIV
RANLNDRVEQIALEVEQCLLLSQQVRKSLKGKIPLDQIQSRGDIQDQLDN
LVFAGFVSAFGGERLSDIVRYLKAIQRRLEKLPVDPNKDRLMTLTLTNLE
EQYKAAVKAYENKGSVVPDDVAEIRWMIEELRVSFFAQTLGTKYPVSEKR
VKQAIEAAK
>IL2247 hrpB, Helicase, ATP-dependent
MTLPIESVLPELAKAFPAARVVIEAPPGAGKSTQLPLFLLQQGIADDGLI
VMLQPRRVAALNIAHYLAKQLGEPVGEQVGYTVRGDSKRSKATKLLIITE
GVLVRWLQDDPELSGIGTLIFDEFHERNLHSDLSLALVIDALPLRPDLNL
LIMSATLPAENLKLWLENYCDQVQVLRSEGRSYPVEYHYRPASHVTQWLA
ELPKVVVEAFAAAEKGVLVFLPGVYEIQKIATELSQRMPPGTIILPLHGR
IPLQQQRQVLKASDEKRIILATNIAETSLTLDGIDVVVDSGRERRAQYLP
QYGLSQLTTQRIAKASATQRAGRAGRQQAGQCFRLWARSDEHGFADYAPP
DVATQDLSALVLDVLRWGSEVSQLAWFSQPDPGHCAAATDFLASTGLIRQ
GQLTAKARQLESGGFDPRILLVADAAKMLKNEQQAAMARVLATLEEPQTS
IKTADLSERTQQHYQQRNQAPLWQQRWRYWLNHFGLKEAAETAEASAEGL
AVALLQGYPDRVAKYDVSRCDFQLACGGRVSGDSSRLKQPAWAIIFDVTF
HEQDTIGRSRCLLPVDDAQALLKEAGIPLQTLQTAEWVGEQQQLRQITRT
QLGSLVLSQTTNSGQVSNEQKAEAFCLWLRDKGLDKLNWSQRAKQLQRRV
YWLQQAGELSAYDMSDAGLLNSLERWTAPYWTNFRSLKQLQQWDPYEALC
YFFDYSELQRLNSACPEWWQTPTERKVFINYLDDPPRVEVKLQEMFGVSE
SPKIIDNRQVVTVDLLSPAGRLLQRTNDLASFWQNAYADVRKEMRGRYPK
HPWPEDPLNATATFKTKRQQ
>IL1002 hupB, Bacterial nucleoid DNA-binding protein HU-beta
MNKSQLIDKIAAGADISKAAAGRALDSMIDAVTDALKKDDQVALVGFGTF
SVRERSARTGRNPQTGETIQIAAAKVPSFKAGKALKDAVN
>IL1654 intA, Integrase
MPRPVTPLNDSQIKKAKPKEKDCVFSDGGGLQLRIRASSGSKLWNFNYLH
PVTKKRMNMGLGMYPEVSLKKARSLAEEARAKVAEGIDPKLSRDESIRTQ
RTEQESTLRKVAEDWFETKKTKVTDDYADDIWRSLELHVFPDLGKKPINE
ITAPMFIQVLKPIEKSGRLETVKRVIQRVNEIMVFATNTGVIQANPLAGV
KAAFQSPKKQHLPTIGKDELPVFLDKLQNTSVSKVTRHLIKWQLLTMVRP
SEAAGARWEEIERLDNGEVNWIIPAERMKKRRQHIVPLPTQAIKVLDKMK
EISGNREHIFISMKNPNTHVNSQTANMAIRRMDYKDKLVSHGLRALASTI
LNEEGKDPDLIESALAHTDPNQIRSAYNRSQYLERRRELMQWWGDYLDNA
VRAGI
>IL0651 intB, Integrase
MSDDKLIIATHKHVEHLKPSDRDEWYRVAGGTGLRLLVRKQGGKYWRLKY
RFNKKQKTLALGVFPNVTLKQAKDATIKAKAMLADGVDPGDTKSTNTNDN
SLRFYAAKWLEYQSQATARVWSEDHKARVWKRLENGILKKLGDKLITDVR
KEDVRRLIENVEAKGHHETAKRIADDTQRLFEYVVDQYSLEDDVDIRLLR
PVKVISKPVVHREALDIKNLPFFMQDLANYTQTGRELTALAIELLILTFV
RSGELRGARWEEFDLDNKVWSIPAERMKMKRPHEVPLSAKALDVIKRIKR
ITGHYELLFPSETKPDEPMSDNTMRQAMFKMGYFPKAKDTKDGKIAKTYL
KYQDNAHYPDGRLKEKAVPHGFRTMASSTLHESDQKFRSDAIERQLAHVE
QNKVKDAYSHKAEYWDERVEMMEWWGDFVNEQRETE
>IL0679 intE, Integrase
MAPRRRMTQNAGLPTGLNQIKKRGVKRWRYRYPSGKDVYLPVETTRHDAV
EAASLFNAKYRNPTISLIERADRYNKPLEYWLPKILRRVREEEQMSSDTQ
KTFEADCERLTLLFGKTYTKAITLRHVNEYLEKYCTGKSNNVYNRKISFL
QKVFTYLIDESAMDLNFADQKKKKRKEGKRRKRLTAEAFKLIHEAASVYL
KVAMELSMQTTHAVLEISRIQYKDCVWLDKPVVEEGMMVFGYLRIHRQKT
EEKEASRVEIPITKELKRVIERSRDRLLSPYIVHRRGRYPKRVGEGCDHP
TQVASKYISREFSKLRDQLGLFSELSKIERPSFHEIRALSARAYKDGGYD
PQARMAHSDAKSTKVYTENHKLWTRVPPGEIAI
>IL1987 kdtA, 3-deoxy-D-manno-octulosonic-acid transferase
MQLWIYGVLIRLVTPAVFVWLWLRGGKDSRYRQNWSERLALGSVDKKQHG
CLVIHSVSVGETLAAKRLIEQLLRQEPGQKILITCMTPTARELIQQHFAD
TVSCRYWPIDSPGAAKRFVRKFKPKAVWVMETELWPQMLNQFSKANIPVA
LLNARLSARSAAGYRRFHWLMKKVWKQLTLVSVQNKETARRMKVLGVPDS
VLFVDGNLKYDIELSVTDIEKALLWRQSCASRHVWLASSSHPGEHELLLE
AHKLIQQDLSNSCLIIAPRHPEQFEVVAKMIRESGLKLARRSESNAIPED
CDVFLADSMGEMMLWGQLASASFVGGSIIERGGHNPLEVIAAGSNVMSGR
HVFNFPQVYGELAKAGAVQWVNNAGEIKQAVELMQQTAVMKAQHEAAKSV
LQTHQGATLRVLKRALEYTLTGSGMIKTEQSPQGLIRYDSDIFETIEDKH
FTAQYWQQQKSIAGNSTGRATVWFIQQGDLGLLLRHYYRGGLVGKINKDR
FLREPAEKSRAIHEFDLLLKLREIGLPVPRPVAARMEKTAVFSYKADILV
EVIPGAVDVFRLLREKKLSAELWQKLGSVIKELHDTGVYHSDLNCHNLML
DDKDKAWIVDFDKCDFRENGDWKEANIQRLLRSLRKEKEKNETFYWKESR
DWPELLTGYRR
>IL1700 lig, NAD-dependent DNA ligase
MNQSVHQRMQELEQLLNRYNQEYYENDEPSVPDAEYDRLFRELKTLETEH
PDLKSAQSPTMKVGGKPLGQFRSVEHEVPMLSLDNAFSVDEFEAFSKRVE
QRLDTNQTVTFCCEPKLDGAAVSLLYENGLLVRGATRGDGQSGEDITENV
KTIRNVPLKLSGDVPERLEVRGEVVMPLGAFERFNEQARQREEKVFANPR
NAAAGSLRQLDSRITAKRPLHFYAYSLGLISETTQLPDSHHQRLLQLKDW
GLPVNIEIKTVDSVQGCDDYYEAILARRDTLNYDIDGVVFKVDSIRLQQD
LGFVARAPRWAIARKFPAQEQLTTITGVDFQVGRTGAITPVARLEPVNVG
GVTVSNATLHNADEIERLGVRIGDCVSIRRAGDVIPQVVSVIKDKRPENT
KAIEFPQHCPICQSDIERVEGEAVARCTGGLYCAAQRKEAIKHFASRKAM
DIDGLGDKIVEQLVERDWIKSPADLYRLSKAELATLPRMGAKSAENLRNA
IKATQETTLARFIYALGIREVGEATANALANHFKNLDALIAAESEQLQEV
PDVGAVVAKHIVAFFHEAHNQQVVAELREFISWPEGEEASSVQSDRLSGN
TYVITGTLSTMTRDEAKSALEALGAKVASSVSKKTTALVAGENAGSKLTK
AQSLGLDILDENALAELLSD
>IL1520 mfd, Transcription-repair coupling factor, superfamily II helicase
MTKASVLRPPFPPAANKDLTWQELHGSSPAMAIARLIDATPGRVLIVTAD
ANQAHRLEQEVKYFAGEHTEYHDDITLFPDWETLPYDSFSPHQDIISDRL
SVLARLPDAKRGALIVSINTLLHRIAPTSFVQGQALQIEKGQQLDSLKLR
QQLENAGYRHVNQVMEHGEFSARGSILDLYPMGSQTPYRLDFFDDEVDTI
RPFDPETQLSKDPIDGINLLPAHEFPLTKTAIERFRANYREHFEASTERE
SVYQQVSKGQLPGGIEYYLPLFFEETASLFDYLPEDTVLVTFGNIQASLE
RLWQDINHRYDQRQFDPLRPLLHPNELFLPVDNIHAGFKQYRRVRANVPA
EMAQPGPTPFLTQAVTEIAADHQQKQPFAKLKTKLEQALTTGDKVLLSAE
SAGRREALREIVSKLGFQVRLCSGLDECPTQQIGLIISPIINSFYLPDAK
LWFITETELFGNRVVQSRRRQQKATVSADTLIRNLAELQAGQPVVHLDHG
VGRYQGLTTLDAGNVTTEFVTIEYAGGAKLYVPVANLNVLSRYSGGEESH
APLNKLGNDSWDKAKKRAAEKVRDVAAELLDIYARREAKPGYAFNINEED
YQRFAAGFPFEETIDQQTAIDAVKQDMQQPRAMDRLVCGDVGFGKTEVAM
RAAFIAVNEGKQVMVLVPTTLLAQQHYENFSDRFADQAIRVEVLSRFKTA
KQSKGILEDLSNGKVDIVIGTHKLLQDNVKCHDLGLLIVDEEHRFGVRQK
DTIKRLRADVDILTLTATPIPRTLNMAMNNIRDLSIIATPPAKRLAVKTF
VREYDEPTVREAILREILRGGQVYFLHNNVDTIEKTAADIEALVPEARVV
VAHGQMRERDLERIMSDFYHQRFNVLVCTTIIETGIDIPSANTIIMDRAD
HLGLAQMHQLRGRVGRSHHQAYAYLLTPHPKRMTKDAHKRLEAISQLEDL
GAGFMLATHDLEIRGAGELLGDDQSGQIESIGFTLYMDMLEQAVKALKEG
KEPALAQLLHERAEIDLKLPALLPEAYIPDVNNRLSLYKRIANCETSKEL
DDLQVELIDRFGLLPDAAKNLIRQTQLRNNAEQLGIRKIDIGNQGGIIEF
ADDTKINPEIIIGLIQKAPSYYKLDGPNRLRLSQPLEDTQSRLKLVESLL
DEFAEQSQAA
>IL0502 mutH, DNA mismatch repair protein
MTDKPQRPQSIDELFQRAAALAGRTFADLAAETGLQVPKDLRRDKGWVGQ
LLELQLGATAGSKPTQDFPELGVELKTLPVTPDGEPLETTFVCTAPLVNI
QGVQWTTSNVRNKLQQVLWLPIDGRREVPLAERVVGSAFLWVPSEQEEAL
LRNDWEEHMDRIALGQVESITARQGEAMQIRPKAADGSALTEAIGPEGTI
IEVRPRGFYLKKDFTRQILQRMFM
>IL0331 mutL, DNA mismatch repair enzyme, ATPase
MAIQQLPIELANQIAAGEVVERPSSVVKELVENALDAGATQLILDIEQGG
SKRIRIRDNGGGIVKQELTLALSRHATSKIQSLDDLEHIGSLGFRGEALA
SISSVSRLRLISKPPEQEEAWQAWAEGRDMQVTVEPAAHPDGTTVDIQDL
FFNTPARRKFLRTEKTEFSHIDEVIKRIALSRFEVGFQLNHNGKSVRAFP
SAQTEKQQLQRLAKICGGGFAEQASAIDAVDGDFHLSGWLVPPEHCRHQG
DIQHFFVNGRMMRDKLLSHAVRQAYEKYLPNERVPTFVLYFELPAEEVDV
NVHPAKHEVRFHRQRQVHDFILTRIEQALNQLVAIENEQPAMSHQHSYSS
QERSSGATSDPYRGASGASFLGERKASGSLLPNAARVPHGNAGAQLSTEP
EAKLKAEQNWRVLSVFNDVYALIRNEYSLAWLNLAKVHTECVSKKLTQQL
QDGLNGQPLLVPVAVSLANLPGPASQWPQQQLNQCGVVYKIQREQAIIEQ
MPEMLRQGNVVSGFTDLLTLLTEDAETDQLARWLAQFAGLESYSLTQAEH
WLIQWRSQLAESADALQKLPLPGENNA
>IL0245 mutM, Formamidopyrimidine DNA glycosylase
MPELPEVEVSRLGISPHIEGRTIKSVKVHDKRLRWPVPETVHKVEGHVLR
SVSRRSKYLLLQTDNGCLILHLGMSGKLRVVPAETTHYKHDHIDIEFDNG
QTLRLNDPRRFGALLYSESDVSGHELLSQLGPEPLTDAFNIDYLFERSRG
RSQSVKTFLMDNKVVVGVGNIYANEALFKAGINPKRAAGKISKVRYQKLV
PIIKETLASAIELGGTTLKDFTQVDGNPGYFAQKLQVYGRGGKLCMVCSN
RLKEVRLGQRSTVYCTQCQR
>IL0744 mutS, Mismatch repair ATPase
MLLFYRMGDFYELFFEDAKRSAQLLDISLTARGQSNGEPIPMAGVPYHAV
ENYLARLVNMGESVAICEQIGDPATSKGPVERKVVRIVTPGTVTDESLLA
EKRQNLLVAICPLNPKQPEAEYAISSLELSSGRFWLTKAHSSEQLAAEMQ
RLEPAELLYPESISLAGLPLAKAKCKRRPAWEFEQQTAFMLLTRQFGTQH
LEGFGIKNNEPTLAAAGAILHYVKETQRAALPHIQALITEHPQDAIILDA
ATRRNLELQQSMGEGDTHLSAVLDKTVSAMGSRQFQRWLQRPIRNHQELN
QRYDAVDALKENLNFENIQLTLKQLADIERIVARVGLRSARPKDFARLRD
SLAKIPEVRASLSHRSLSYLHDIIEPFPEVVDLLTKAVIEQPPLLIRDGG
VIAEGYDKELDELRDLATGATDYLKQLEQRERERSGIATLKVGYNRVHGY
FIEVSRQSSEAVPDDYQRRQTLKNTERYIIPELKEHEDKVLNAQARSLAR
EKWLYDQLFEHLLPQVTALQKSASGLAQLDTLCCFARLADNYRYCRPQLQ
KETSLIELEAARHPVIEQLSDEPFIANPMSLTPQQRMLMITGPNMGGKST
YMRQAALIVILAHMGCYVPADKAIIGDIDRIFTRIGASDDLASGRSTFMV
EMTETANILHNATAKSLVLMDEIGRGTSTYDGLSLAWSCADYLSRQLQCL
TLFATHYFELTELAEELPATVNVHVDAKEHGDTIAFLHKVSPGAASQSFG
LQVAKLAGVPEHVIHKAKQKLSELEHTHHGGLNEPKQATMELTPPPEAIP
SHTEKRNPLLDELEQLDINDLTPKQALDILYQWQQKQKGSTQS
>IL0446 mutT, 7,8-dihydro-8-oxoguanine-triphosphatase
METQKSPAVHVAVGVIENEQGEIFIAQRHPEQHQGGKWEFPGGKVEAGEN
VQQALQRELKEECGIDVTDMAPLTVIEHQYKDKRVLLDVWWVLSYSGEAR
QLEGQDWCWVDKNQLDAFQFPEANQPIVECIMQSLNAY
>IL1983 mutY, A/G-specific DNA glycosylase
MTQTFSSQVLNWFQQYGRKHLPWQKNVTPYRVWVSEIMLQQTQVTTVIPY
FERFMATFPTVQELASAPQDKVLNLWTGLGYYARARNLHKTAKLVCTEYN
GEFPKKVHELEQLPGVGRSTAGAIRSLGHGEYAPILDGNVKRVLARHFAV
SGWPGKADVLKQLWQLSEQLTPKQDSGAYNQAMMDIGAMICTRSKPLCEQ
CPVNSTCIARATDTIAQYPGKKPKKIKPVKTTHMLLFRHNHQFLLEKRPQ
SGIWGGLWCFPQCDEETDIPSLAQQYGVTELARQQLTPFRHTFSHFHLDC
KPLLIDVAPSEILLNEAQHLWVKADTNQDLGFAAPTVKLMEQLTTK
>IL1800 nth, Endonuclease III
MNKTKRYEILSRLRDNNPNPTTELEYDSPFQLLIAVLLSAQATDVGVNKA
TRKLFPAAPTAETMLALGVDGIKEYIKTIGLFNSKAENAYKTCKILVQEY
GGEVPEDRAALEALPGVGRKTANVVLNTAFGWPTIAVDTHIFRVSNRTKL
APGKNVKEVEEKLIKVVPAEFKVDVHHWLILHGRYTCIARKPRCGSCVIE
DLCEFKEKTSD
>IL1953 parC, DNA topoisomerase IV subunit A
MTTEVTETRPLSRFTEEAYLNYSMYVIMDRALPNIGDGLKPVQRRIVYAM
SELGLSALAKYKKSARTVGDVLGKFHPHGDSACYEAMVLMAQPFTYRHPL
VDGQGNWGSPDDPKSFAAMRYTEARLSKFSEVLLSELGQGTVDWIPNFDG
TMKEPQVLPARLPHILLNGVTGIAVGMATDIPPHNAREVANACAMLLEKP
GSQLEDIMEVLKGPDYPTDAEIITPSEDIVKLYETGRGSIKMRACYSVED
GEIVITALPHQASGARVLEQIAHQMQAKKLPLVSDLRDESDHENPTRLVV
VPRSNRVDTEQLMNHLFATTDLEKQYRVNLNILGLDGRPKVKPLVGILKE
WLEFRQTTVTRRLQHRLDKVLARLHILEGLLIAYLNIDEVIEIIRTEDKP
KEELMSRFALTDKQAEAILELKLRHLAKLEEMKLTGEQDELNKEREKLET
LLGSDRRLKTLIKKELLADAENYGDERRSPIVERSEAKALSERDLTPAEA
VTVVLSKKGWVRTAKGHDIEGDKLSYKSGDSYLASAEGKSNQPVVFLDSS
GKSFSCEAHLLPSARSQGEPLTGRFSLVAGENVEHVLMAKDESHLLLASD
AGYGFVCQFSDLVSRNKNGKAIITLPTGAKILPPNNVNDLQHDKVIVISN
EGRMLVFPVADLPQLSKGKGNKLISIPALRAQSREEYVVALATAAPDAAI
TLIAGKRKLTLKPADLEHYYGERGRRGNKLPRGLQRVDGIVVEENKD
>IL1954 parE, DNA topoisomerase IV subunit B
MTDYKSDSIEVLNGLEPVQRRPGMYTDTSRPNHLGQEVIDNSVDEALAGH
AKSLLVILHPDQSLETTDDGRGMPVDIHPEEGVPGVELIMSKLHAGGKFS
NKNYQFSGGLHGVGISVVNALSKRVELTIKRDGQVYEMAYENGDKVSELE
VTGTVGKRNTGTRVHFWPDPQYFDSAKFSVTKLKHILRAKAVLCPGLKIT
FRNKIDDTEDTWFYQDGLTDYLVEAVKDVPTLPEMPFDGSFSSQTEGVDW
AVTWLPEGGEGVSESYVNLIPTTLGGTHVNGLRQGLLEAMREFCEFRNLL
PRGVKLTPEDVWERCSYILSTKMQDPQFAGQTKERLSSRQSASFVSGVVK
DAFSLWLNEHTDQAELLADVCISNAQRRLKASKKVVRKKVTQGPALPGKL
TDCSSQEPGRSELFLVEGDSAGGSAKQARDREFQAVMPLRGKILNTWEVD
PEQILGSQEIHDISVAVGVDPNSVDLDKLRYGKICILADADSDGLHIATL
LCALFVKHFRPLVEHGHIFVAMPPLYRVDVGKEVFYALDEAEKQGILDRI
EAEKRKGKVNVQRFKGLGEMNPLTLRETTMDPNTRRLVQLTIDDGEVMEE
LMDMLLAKKRAGDRRTWLESKGNMADLAEL
>IL1388 phrB_1, Deoxyribodipyrimidine photolyase
MREAIWFRSDLRILDNPAVFSACHGDEPPLAIFFVCHETWKSHDWAPIKV
DFIWRNLECLQQDLAEKGIELQVQLVPKFSQVPGALRSFCRENKIARVHI
NAEYALDEKRRDAATNAVLSNDDIELVSHHGNLLVSPGEVRTQQGDYYKK
FTPFNRRWRQVLSEKTYSEPLQIKSYSRVTAKGLPECPLGRKDSSDWSAG
EQQVLGKLGQFVGHSVDDYQQARDLPAENGTSQLSAYLAQGVIGPQTAVR
ALHKFSPEFPFGLASGADTWLTELAWREFYQHLMYFVPRLSKGESFQSET
DSIQWLEDDDAFQRWCDGRTGYPIVDAGMRQLTSTGWMHNRLRMITANFL
VKDLLVDWRKGEAFFMQHLIDGSFPANNGGWQWSASVGTDAVPYFRVFNP
VKQSEKFDPDGQYIRKWVEELKEVPTKYIHWPHSWLQQQSSNNYCDPMVE
HKFARERFLTTFKQVKNG
>IL0122 phrB_2, Deoxyribodipyrimidine photolyase
MNTKQQLVFIMADYRLGLFVFRNDLRVEDNLALYEAAQRSETLICCFCFN
PTQNKYGHYGIPAMGKHRFTFLQQSLKQLRTELEMRGQKLIVLTGTFDRI
LTELISERQVDAIFLSQHQGYYERLQLGLLQQRFPFLPFHETPNNTLFSE
QELPFELADLPETFSQFRKKVEPLSRNFSVQPVNALPSLPKNISYPGFKA
ETLNELASDDFEGGERAALTHLTSYFSGESAGTYKQTRNALDDFSSSTKF
SPWLAQGCLSVRQIMAALRAYETEFGENESSYWISFELLWREYFFWYALK
HGKRLFAFSGLSGKSPKTSFYSERFQKWCSGNTPYPIVNACMKQLNATGY
MSNRGRQLVASCFVHELSLDWRYGAAYFEQQLIDYDVSSNWGNWQYLAGV
GADPRGHRQFNLEKQTERYDPDNEFIERWAGDLSGQPIDSVDAADWPVR
>IL0025 polA, DNA polymerase I
MATSVPENPFILVDGSSYLFRAFHAPPHLTNSKGEPTGAIYGVVNMLRSL
LKRYKPSHMAVVFDAKGKTFRSDIYQDYKANRPPMPDDLRSQIKPLHDIV
QAMGLPLLCIDDVEADDVIGTLARQAGDKGRFTLISTGDKDMAQLVNEHV
MLINTMTDTLMDPEGVEKKFGVKPNQIIDYLALMGDSSDNIPGLPKVGEK
TAQALLQSIPSIDAIYENVDAVTELSFRGAKSMPAKLNEYKEQLLMSREL
ATIKLDVAMDLQPEELKIQTADSEKLQELYSRCEFRRWLDELMETGAATN
QVLGETDGEKPTSDINRDAYGVLMTEKEVSDYITQLNKFDYFAFDTETTS
LNYMEAELVGVSLAMAPGEAVYIPVGHDYMEAPDQVGRDWLLEQLKPLLE
AEKPQKVGQNLKYDSHILRRYKIRLAGILNDTMLASYVFNSVGSRHDMDT
LSLHYLNHKTISFEDIAGKGAKQLTFNQIALEQAGPYAAEDADITYRLHD
VLWNKVKETGSELQSVLTDIEVPLVPILCDMEQYGVRIDANLLGKQSQEI
AEKLDALEKKAFEIAGEEFNLGSPKQLQRIFFEKLELPIVKKTPKGAPST
AEEVLHELAHDYPLPDVILQHRGLSKLKSTYTDKLPKMINPDTGRVHTSY
QQAVTATGRLSSTDPNLQNIPIRTAEGRRVRQAFIPEQGYKIVAIDYSQI
ELRIMAHLSQDESLLKAFAEGLDIHRATAAEVFGCKADEVSNDQRRQAKA
VNFGLIYGMSAFGLARQLGIARHEAQHYMDKYFERFPGVLRYMEDTRKQA
KEQGYVKTLFGRRLPLPDIKASNGARRKGAERAAINAPMQGTAADIIKKA
MLKVADWIDSNNCQDDVRMLMQVHDELVFEIKESKLTDYIEQLTEVMEKA
ASLDVPLIAEAGKGNNWDEAH
>IL2461 priA, Primosomal protein A (replication factor Y), superfamily II helicase
MKQASTGSERRYKVALPLPLRQTYDYLCKSAEPLPQGVRVRVPFGQRQLV
GYVVAEASDEPPTFELKSVASVLDEQRLWPDDIWQLVRWSSDYYHHSLGD
VAANSLPVLLRKGDAPEYLTETFYALTDLGRAQSINDLKGAARQQQVLAA
LKYQPLRRSDLTDIGVTSAVLRTLQDKGWIEVREQAPTKNQGWQKQSSVL
KEQGHALNTEQAVAVSTINQQQKHSTLLLEGVTGSGKTEVYLQAMEPVLE
RGEQVLVLVPEIGLTPQTLQRFKERFDAPVVMLHSGMSDRERLNTWLDAK
HGHAAIIIGTRSAVFTPCQKLGLIVVDEEHDLSYKQQDGFRYHARDIAIK
RASLLNIPLVLGSATASLETLNNAVSKRFHWLKLGQRAGGAQMVKHELID
LKQQPIKAGVSKALQEQIQVEIERGNQVLLFLNRRGFAPALMCHECGWLA
QCHRCDAYYTVHKAHHQLQCHHCGSQQRIPKQCGSCGSTHLISHGVGTEQ
LEHSLKEMFPGRGVLRIDRDSTRRKGQLDDYLQKATNNEYPLLVGTQMLA
KGHHFPHVTLVALLDVDGALYSADFRAAERLGQLYTQVAGRAGREHKAGK
VVLQTHHPEHDLIQDLLNNGYSHFALTALAERQQSELPPFSYLALFRGEA
TDRDSVVQAMTQIQQLMPQVEGAFLLGPMPALMERKAGRYRYQLLLHCQS
RKLRFQLIEHLLPQINALPLLKKVRWSLDIDPQDFS
>IL1939 priB, Primosomal replication protein B
MNRLHLTGTLGKVPKLETSPSGIEHLQLVIEHRSMQPEAGMNRQSYVRIQ
VVLSGEGLQHWLEKLTVGCEVLAEGFLHRHEDSNGSPRLVLHAQHLELI
>IL1860 priC, Primosomal replication protein C
MREILNVTSIQHIEQLLNTLQGRAEQIDGENRKKHRQLSENWFSSSLFSQ
SSNLAVDYVAETQNLFRQLQKSDNHHAQRYLAEKLSLQLEALNTAFRANR
PPKQQQDHRITAQNQLQQMHQQLVTYRDYERRLTENLDTAAAGNNPTMIQ
SAQQRLNRCQMAIDSLEKKISRYEEG
>IL0240 radC, RadC
MSVKEWPVSERPREKLQTQGAEYLSDAELLAILLGSGSGGQDVVSFARRL
LSDFGGVGALLTATPEQLLACNGIGPARVNQLRVVLELSRRYLKWQLERS
DGFTEPTMVKDYLTSQLRHQGREVFAILLLDSQHRLLRYEELFQGTINAA
PVYPREVIKLVMQYNAAAVILAHNHPSGVAEPSQADQRVTERVKKALTLI
DVALLDHFVVGAGDPISFAERGLL
>IL2121 rdgC, DNA recombination-dependent growth factor C
MWFKNLRFYQFSETFSLPDDFSEQLSEHSFHPCSRSDQSSFGWSSPFGAD
NEVLTHSLGNCWLLCAKREEKVLPSTVVNAQLDEKVRQISEAEGRSVPRK
EKQNLKEDLIHQLLPQAFSRFRQSWGYIDLDRQIIAIDESAANKAEDFLG
LLRGSVGSLPVRPVSPSDAVETYLTAWLQSAELPNPFEFGDEAELRSPQA
DGGIIRCKQEDLTREDIQAHLAGGKQVTRLGLVWQENLEFIIESDMALKR
VKPTDRLLDAKDDLVDPSPEEKIDADFALVSAEVGLLFDDLKRAFG
>IL0742 recA, RecA recombinase
MSNDRQKALDAALGQIERQFGKGSIMRLGDNQTLDIDSVSTGSLGLDIAL
GIGGLPFGRVVEIYGPESSGKTTMTLEVIAEAQKMGKTCAFVDAEHALDP
IYAEALGVNVDDLLISQPDTGEQALEICDMLVRSGAVDIVIVDSVAALTP
KAEIEGEMGDSHVGLQARLMSQALRKLTSNIKKSNTMCIFINQIRMKIGV
MFGNPETTTGGNALKFYSSVRLDIRRTGALKEGDEVVGNETRVKVVKNKV
APPFKEAHFQILYGKGISKEGELIDLGVKHKMVDKAGAWYSYNGDKIGQG
KANSMKFLQDNPKIADELEGRIRELLLSKPEKRTKEIREAERAAAKEDAK
SEAKADKKTEKKGNEKDDISLS
>IL2531 recB, ATP-dependent exoDNAse (exonuclease V) beta subunit
MSQLSSHNSGHTLGHKLDNPLDFPLNSSRLIEASAGTGKTYTIAALYVRL
VIGHGSHNGAEETAFDRELVPKNILVMTFTKAATEELSDRIRARLAEAAA
YFRDPEAVEGDPFLASLREDCAAQGQNLMHLARLLDLASQSMDEAAVKTI
HGWCQSMLKEHAFASGSLFSQDVETDNEELRLQAAGDYFRRFIYPADAEL
SARLLEDFKSPETLLGLTYSLSKSGQAPIDGDLHSLLNEAESAHQQRMVA
IKQEVAPIVQELVDKTSQAKGAATKLKQFQKFADWCGDPDLVEPEATAAN
WKNISTDELQKFADAKLGDMPQSWAVLGELQERIKRSKVQQQEELAKVKQ
HAAFWVSNRFAELQNQRAEMGHDDMLTRLRDALKGPSGEALAAAIRKQYP
VAMVDEFQDTDPVQYEIFNRIYNLADPHPGTGIFLIGDPKQAIYSFRNAD
IYTYLKARRDTEGRHYNLARNFRSSQAMVDGVNALFERAEELPRGAFLFK
TEAENQLPFNPVGANGLKRTFKHCLLSSNLKTAPALLWSVSGEEKRNKDT
FFRAAANHHANLIASLLNDPQAGYYDGDDKLEQRVKTSDIAVLVNNFNEA
NAIKKALSDRGLKSVYLSDRESVFAQRVAKDLLALVSACAEPRDPSLIRS
ALATQILGLPLSELEHIHSHEREWEQRVEQFLSYHDQWQRQGVLAMLHSL
LHDHQVPAKLLEDRIHGERQLSDVLHIAELLQQQSLVLDGIPALVNHFAE
QVNERHGFGSNSRTQSDEQQLRLESDDELIKIITIHKSKGLQYPLVFMPF
VAYTQAEAYRIKPPAVYHDENGELQVLWSKDDDNKQRLSNEILAEDLRKM
YVAVTRAQYATFIALEAVKEHRNNPLFYLLNGGESLTDELYTEVNERWQQ
APHTQLTRLEDDEPLVRALEQEQTTPKLTPRSMPADRKLERWWVASYSAL
KYEGAVTKSVQAPQSPDEMNLLDERDDDEAEVASAAEPSPDSIHHLPKGA
GPGTFLHNLLEESANIGFAQIAGDAAERAELVQGFCVSPYWQEHQNSLEH
WLDAYLHNEFPINDSGESVSLSALEQYKAEPEFWFGASEVNAQRLDALVR
EHILPGHERPALEPNVLNGMLKGFIDLVFEHNGKYYVADYKSNWLGEDDH
AYTEQAMREKILHSRYDLQYVIYTLALHRLLKARLGSDYDYDTHVGGAVY
LFLRGHRAETGGAFCDRPPRKLIEQLDTLFAGKNLSDKEPV
>IL2532 recC, Exonuclease V gamma subunit
MSELTPGFIVAHGHRLEDLTDVAVTFTQNYPLAPLEQETVLVQSNGIAQW
LKINLAQASGIAAMIDVTLPARFQWKAYRAVLGDDIPKTSPFDKDRLTWR
LMRLLPELIEHNPHFAPLKHYTSDDSDGRKLYQLSGRLADLFDQYAVYRA
DWLDNWVRGQDMLEQEQPVEDEQLWQPELWRAVSNDIGIDDYWNNRAELH
QRFIDTAQALTERPAGLPPRVVVFGISSLPQQMLQVLDAIKGYTQILLCV
HNPSQYHWADIVDGKEALRQAVKASSRLKHKPELPDDPNDDELHQLAHPL
LASWGKQGRDYIRLLDLYDETLAKQEAFNTIKLELFEPHNTDHLLAQLQD
DILNLRPVQETRELWPTPNTADKSLQFHVCHSPQRELEVLHDQLLDAFAK
DPELKPRDVMVMLPDVNTYAPYIDAVFGRYHNRFGERDPRAIPYTIADQG
ERHQRPLMIALELLLQVDQLRFTQTDLFNLLSVPAVQQRFDMSDDDLPQL
KRWVKEAGARWGLNAEQRAQFYMPAAEETNSWWFGLKRMIAGYAMGDLAD
VNLENDSPWANVEPYTEVAGLSAALVGCLADVVRTLEQWWQRAQGEHSLP
EWVTQGEWLLEQFFEAEEDSDRLLLAKLSDELYQLRDICVEADNESQLRL
PIFKDAWLERVDQQNLNQRFLAGAVNFATLMPMRAIPFKYVCVLGMNESD
YPRSTPRVDFDLMTDRYRPGDRSRRDDDRYLFLEAMLSARDCFYLSWVGY
SAKDNSERTPSVLVAQLRDHLQQGWEVDINSLTVVHKLQPFNPYYFNQED
SDYFTYASEWAQAHQGAVASTSRTASETAADDELERTLSINDIKRFIEEP
ARLYFNWRLDTYFSRNSEDLDDSEAFVMDNLQSWSLTTRLVDAGKKALLN
GAGIEASLLKELNRIKREGALGIGAIAEQNGLQLLEQSQEILETYQQSIA
GYSGVNEFPETVFFEHSGLTIDDTVTGLHSNENGERLWVVTSASNIAAKN
GKGINSGGWKHASAYYLGLLLLNLQKPTRLLIVSKGGCQLQVAPVPAELA
VQQLEQILELVALSAQQPQPMHLDVGMTWLSAMDKNSQDEALAHEAARQK
YEEDGFQDPALVTKSDYCGRVAESYEAIQASPHFRRFMDELYDPMRLTLV
PEDKS
>IL2530 recD, ATP-dependent exoDNAse (exonuclease V), alpha subunit, superfamily I helicase
MTEVTSNTLFDALREWRDAGWIRSIDLAFVEFLQQAGETRSEVLLAALCA
SHEAGRGHTCIDIKALQNEPESVLNLPPENRYSPNCVNPSELFRQFGTDV
EAALIQSHCVDVDGKGNQPLVLSDGKLYLRRYWQYEAFIENDLQARMSDR
PVTNDDLLKSTLAKLFDKPDGDKAEEINWQRVACANTVRNRFSVITGGPG
TGKTYTVVRLLTALQHQTLFLGLPPLRVSLAAPTGKAAARLTESIESELN
RLRGDAKLATLKDALDAIKPEGKTLHRLLGVKPNSRAFKHHADNPLRTDV
VIVDEASMIDIEMMTALLKATPKNARLVLIGDKDQLASVEAGAVLGNLCE
GADQGHYHTETAQWLQHVADTPVLPAELIDNNGEQRLQHVVKFRKSYRFH
GPIADLANAINRQDNAATKQELEKAKVADEDYPVSLYEVSSLDDPAFEAL
VKRNLTTSGSLTLHVRNNADTNSNVTKTANAEDINKLAQEALQNLSNFQI
LTALREGPWGVKAVNQKVGEILGVNANTWYEGRPVMVTKNDYGLKLNNGD
IGLTFKDPEHGHLRVAFPDQTNKSENKGVRWVLPSRLTHIETVYAMTVHK
SQGSEFKHTVMVLPDHDSPVLSKELLYTGITRAKERLSLVGSGLKVI
>IL0003 recF, Recombinational DNA repair ATPase
MFIETLNLSHFRNFSEVALSPSPKINIITGDNGSGKTSLLEAIYLLGFGR
SFRPGGFRQLIKEGNSGFTVFCRSQDYAIGVRRSTDGEQSLRLNGANVQR
MSDVARLVPVQLLTPESVDILLEGPGQRRQFIDWGVFHVEHSFYSDWVAY
TQLLKQRNSLLKQRSLPVREDRYWKEQLAYYGERISKSREKYLEELNDYI
QELAKSFLSDVTMEVRLKSGWDTSQSLFDALESHTEKDKKYGFTSVGAHK
ADIKVIADGVEVKHRLSRGQLKTAITALKLAQGKHYQKIKRQPCIYLVDD
LTSELDSKNQALLCRELENLDAQVFITAITGKQLSDKFQKSPRMFHVEHG
VINE
>IL2374 recG, DNA helicase RecJ
MAVKGLQHIPLTVLKGVGEKVAVKLRKLGLASVSDALLHLPLRYEDRTQV
TDVANLRAGVATNVLVTVRHADIKYGRKRMLICQASDETGSISLRFFQFS
AAQLKQFAQGTQLLAFGEVRRGMTGWEMVHPEYRMVKAGEPLNMQETLTP
VYPMTEGVTQGILRKIIEQALTYLQPGSLPELLPENLRPHQLSLEQAILT
LHRPPVDVPLALLEQGEHPAQQRLASEELIAHQLSLLQLRQARQAQAGFT
IKGNGALQEAFLKQLPFSPTGAQTRVVKEITSDMAQGQPMMRLVQGDVGS
GKTLVAALSALAAIEAGYQVALMAPTELLSEQHAITFSQWLMPLGINVAW
LSGKSKGKSRRELLAQLKQGDIHLLVGTHALFQADVEYRRLALVIIDEQH
RFGVHQRLQLREKGVQAGVHPHQLIMTATPIPRTLAMTAYADLATSVIDE
LPPGRTPVTTVAIPDTRREQIVERVREVCATEGRQAYWVCTLIEESDVLE
CQAAEDTANDLQEQLPGLSIGLVHGRLKHEQKEQVMQAFKAGDIDLLVAT
TVIEVGVDVPNASLMIIENPERLGLAQLHQLRGRVGRGSVASHCVLLYHS
PLSQTAQQRLGVLRESNDGFVIAQRDLEIRGPGELLGHRQTGLAELKVAD
LERDEALIPEAQNIAQHVLEHYPQSAEALIERWLPRRDHYAQV
>IL0824 recJ, Single-stranded DNA-specific exonuclease
MSDYEIRRYQLVDDDFLPQQMPPLLRQIYARRGVRRADELSLKASGLLHF
SSLRDIGKAVELLQNALKNQAKVCICGDFDADGATSSALMVSALQAFGLQ
QVGYRVPNRMTDGYGLSVAMVEQLAVENVQLIVTVDNGIAAHDAIVLARE
KGIQVLVTDHHLPPEELPPANAIVNPNQHGCEFSSKNLAGVGVAFYVLLA
LRSALREQGVEPLPNLADWLDLVALGTVADVVPLDYNNRVLVQQGIARIR
KGMSRPGIKALLEVANRDASQLAASDLGFALGPRINAAGRLDDIGLGIEC
LLAGETRAQQLAQQLNDLNQQRKSIETEMREHAESAVAKLCFDQGQVPDL
VTLYQPDWHAGVIGIVAGRVKEQVNRPVIALANDDDEFLKGSARSVSGLH
MRDLLERVHSLQPGIMERFGGHAMAAGLTMKKENLTRFSELAEQVASEWL
SEEQKQRVFWSDGELTTTQLSLDSVNTLQSAGPWGQQFPEPMFDGQFELV
DQRIVGERHLKLVVRHPQGELLDAIAFNVDTQQWPARQASVVELLYKPQL
NHFRGRTNVQLLVEQIRAIR
>IL0989 recN, ATPase involved in DNA repair, RecN
MLSQLTIRNFAVVKSLDIEFHNGMTAITGETGAGKSIALDALSLCLGSRA
DANWVRPGQEKAEITAVFALEDASPAHQWLTENEFDADDDCVLRRVIQRD
GRSKAWINGTPVPVSQQKSLAPLLVNIHGQHEHQLLLKEEHQLTLLDSYA
RHQHLLDKVQQDYKNWASVEKQYQSYQQQKEELEAQRQLLEYQVNELNEF
ALADGEFDELEQKHKRLSNSKVLLEAGVFALNALYEGEHNNASSLVQSAS
QRLAEAEEMDTALSPINQLLQQAKVHIEEAALELRQYQDDLELDPGELQI
IEDRLSAAIHLAKKHQIPGSELSQQHKKLIDELDNLEQAGEQAEKLDEDR
QQARKVYRESALKLSASREQAAAELSQKISSSMQELNMPHGRFVIQVEHD
ASARATRLGTDEVEFLVTTNPGQPIQALNKVASGGELSRISLAIQVMTAT
QKTVPTMMFDEVDVGVSGPTASIVGSMLQALGKTSQVICVTHLPQVAAKA
HQQLQVSKSTDGAETETAVVALSKEQRVVELARLLGGDKVTDMAKANARE
LLAS
>IL0808 recO, Recombinational DNA repair protein RecO, RecF pathway
MAQRALVLHRWDYQETSLILDLFTEDKGRVRVVAKGAKRPKSPWRGLAQP
FMPLLAEFQGRSDLKTLTLLEPQQTTQKLLLQGDKLYSGFYLNELIQRLV
PTEAEAPELFESYLSALQNMTNSERVEPALRQFEWQLLQHLGAAFDWHYD
ADTGNVLSDSKWCYFIPDHGFVTQARDNQQRAYSVADIQKLAAWDVDDEN
RLRLLKYIMRDALAVYLGDKPLRSRELFRGTKRQ
>IL2547 recQ, Superfamily II DNA helicase, RecQ
MHSSTAEKAQFDPLKQQLESTFGYHQFRDGQEDIMQAAMQGRDSLVLMPT
GGGKSLCYQLPAICGDGLTLVISPLLSLMQDQVEALKALDISAATLHSGV
SSQESMATMQGLQSGDIKLLYVSPERVLQPTFIERLQTLKLNFIAVDEAH
CISQWGHDFRPEYGKLGVLRNYLPNVPFMALTATADSATQHDIIERLCLR
EPLVHRSSFDRPNIRYVVQEKYKPLKQVRDYVKKQKGAAGIIYCGSRKKT
EELSESLQQAGVRAAPYHAGIEHQIKESTLRQFLRDDIDVVVATVAFGMG
INKPNIRFVIHFDIPRSVESYYQETGRAGRDGLPAEAVMLYDPRDAQWIR
RMIEDQENEQRRLVEAQKFSAMQAMAEAQTCRRLVVLNYFNEYSDKECGN
CDLCLDPPQRYDGLEDAQKALSCVYRVGQQFGINHVVEVLRGSKAQRVLE
LGHDQLSTYGLGKSETQEHWFSVLRQLIHRGLILQDIRRFAALQLTDAAR
PVLKGEVPLELAKPRIELTATKTRITDRGDYNKILFRRLRKLRKDIADRD
QVPPFVVFSDAALVEMCVHYPTTAKDMLEINGVGEVKLARYGNEFMQAVE
AFLSGASERQLFNG
>IL1847 recR, Recombinational DNA repair protein
MSISPAIDQLVENLKRLPGVGQKSAQRMAFHLLERDRGGASRLAESLQSA
VEKVGHCECCRTLTEEPLCRICSNPMRRENGVLCIVETPADVLAIEQTSQ
FQGRYFVLMGHLSPLDGIGPADIGLDELERQLQSEPVEEIVLATNPTVEG
DATAHYIADIAAQLNINTTRIAHGVPVGGELGYVDQTTLGHAFSGRKQFS
R
>IL0207 rep, Rep helicase, a single-stranded DNA dependent ATPase
MLNDRQNQAVHYIQGPLLVLAGAGSGKTRVITEKIAYLIRQQIYTARQIG
AVTFTNKAAKEMKERIAQTLPKAQLRGLTVCTFHTLGLNIIRRELSTLGF
KPGFSLFDDQDTYALLNALTEEVFEGDKALIQACQHQIGHWKNAMLSPEL
ALQKASNDQEKAFAQVYQQYQNNLSACNAVDFDDLIRLPTQLLATNENAR
ARWQKKFQYLLVDEYQDTNTSQYQLVKLLVGERARFTVVGDDDQSIYSWR
GAQPKNLALLKQDFPQLDVVKLEQNYRSHGRILKAANILIENNPHVFEKK
LFSEMQYGEPISVIFGRNEEHEAERVVAEIVKQRFLRKTPYHHFAILYRG
NHQSRLFEKALMNNRIPYKITGGQSFFARAEVKDIMAYLRLLVNPTDDTA
FLRIINTPRRGIGPQTVERIGRLSQELGCSLFEACQSPHLKTQLSTGVFQ
HVDVFRNMIDTLARRADHQEDASDAVKQLLSEIGYEDWLFEQSPSAKAAE
MRIKNVYELHRWVSDMLKGDAEHEPMELNQVVSRLSLRDMMSRNEDDEQF
EQVQLMTLHASKGLEFPQVFLVGMEEGLLPHQSSIDENNIEEERRLAYVG
ITRAQHKLVFTMAKERRQFGEKTEPQPSRFLLELPQDDLEWEHRKQKSDE
EREEQRSQGLEMLKNALKK
>IL2363 rhlB, ATP-dependent RNA helicase
MTKKHLTETRFADLALHPKIQQAISSAGFEYCTPIQALSLPVALSNRDVA
GQAQTGTGKTLAFLLATFNRLMQNESSEKTESGPRALIMAPTRELAIQIA
HDADALIEHCGLKMGVIYGGEGYEGQKEQLAAQPDILVGTTGRLIDFYKQ
DLFSLKDIEVVVLDEADRMFDLGFIDDIRYLLQKMPDPSKRLNLLFSATL
SYRVQELAYEHMNAPTKLEVEPLQKTATRVTEELFYPSKPEKFPLLLTLI
EEDWPDKAIVFANTKHGCEKVHGWLVANEHRAGLLTGDVPQKKRLRILED
FAEGKLDFLVATDVAARGLHIPEVTHVYNFDLPDDCEDYVHRIGRTGRAG
ASGAAISLACEEYVYNLPAIEDYIGHTIPVTKYDGDALLSDLRRPRPIQR
RRRHNSGGGKGKPRGRRSGPPRNAS
>IL1546 rhlE, ATP-dependent RNA helicase
MSTEQNPSSFQSLGLSDDILRAVTECGYTTPTPIQQQAIPTVMAGHDLLA
AAQTGTGKTAGFTLPLLHKLSQTKTDGKPVIKALILTPTRELAAQVEDNL
NTYAKYTGLKSLVIFGGVGINPQISALRRGVDILVATPGRLLDHSRQGTV
DLSKIDVLILDEADRMLDMGFIHDIKKVMKLIPEKRQTLLFSATFSSEIK
ALSQQFMQQPKLIEVARQNAAADTIEQRVYPVDKKRKRELLSYLIGSRNW
RQVLVFTRTKHGANRLATQLTDDGLPAMAIHGNKSQGARTKALAQFKAGK
LRVLVATDIAARGIDIDELPHVINFELPQVAEDYVHRIGRTGRAGSEGEA
ASLVCVDEHKLLRDIEKLTKNEIPREVIPGFEPDPSIKPEPIQKPRTGRP
QNSRRAPRQKRPDTRR
>IL1694 rnhA, Ribonuclease HI
MSNSKTVHLYTDGSCLGNPGPGGYGAVLEYGKHHKELSQGYRLTTNNRME
MLATIAGLRELKRSCHVILTTDSQYVKQGVEQWMHRWKQNGWRTSARKAV
KNKDLWQQLDEEVNRHKVEWKWIKGHSGHKQNERCDELARDAATREPMLE
DEGFGGE
>IL1670 rnhB, Ribonuclease HII
MICGTDEAGRGPIAGPVVAAAVILDPDNPIEGLNDSKKLSEKKREKLSLE
IKEKALYWAIAQSDPDEIEAINILWASMKAMQRAVEALPVKPDMVLVDGN
RVPELKVPAKAIVGGDASEQCIAAASILAKVERDRQMLKWHELYPQYEFD
KHKAYGTPKHLELLEKHGPCPIHRKGFNPVKRLLANL
>IL1802 rnt, RNase T, degrades tRNA
MSDSSNSLMKQRFRGYMPVVVDVETAGFNAKTDALLEIAAVLLDFDDDGI
LKPVDSVHYHVKPFEGANIEQAAIDFNGIDPHCPLRGAVEEGEALRELFK
PIRKAQKAAGCQRSVLVGHNSNFDHGFMMAAAERANLKRNPFHPFVSFDT
TSLAAMTLGQTVLIKACQAAGIEFDSKQAHSALYDTERTAELYCWMINRW
KELGGWPPESRQDKS
>IL1086 ruvA, Holliday junction resolvasome, DNA-binding subunit
MIGHIQGVLTSKQPPEVVLDVQGIGYEIQLPMTCFYQLPPVGETIKLITH
FVVREDAQLLYGFISASERSLFRLLLKTQGVGPKLALAILSGMSADEFVM
AVNQNDVTRLVKLPGVGKKTAERLVIEMRDRLKDWQPSTPFTDRAPLDSQ
GMDAREHPADARTDAISALQSLGYKENQAEKALQKVYSAEHNSETLIRLA
LKQLS
>IL1085 ruvB, Holliday junction resolvasome, helicase subunit
MIEADQIPTQRLIEPEVQGEDEAVDRAIRPKTLADYTGQKHVVEQMGIFI
EAARKRQEALDHLLIFGPPGLGKTTLANIVANELDVSIKTTSGPVLEKAG
DLAALLTNLEAHDVLFIDEIHRLSPVVEEILYPAMEDYQLDIMIGEGPAA
RSIKLDLPPFTLIGATTRAGALTSPLRDRFGIVQRLEFYDVNELTDIVGR
SAHFMNVRMLDGGAREIARRSRGTPRIANRLLRRVRDYAEVRGNGDVDEV
TANAALTMVDVDQAGFDYMDRKLLLAIMEKFMGGPVGLDNLAAAIGEEKD
TIEDVLEPYLIQQGFLQRTPRGRIATPRAYQHFGLKPEK
>IL1087 ruvC, Holliday junction resolvasome, endonuclease subunit
MAIILGIDPGSRLTGYGVIEQRGRQLNYLGSGCIKVIGTTKEPLTLAEKL
RRIHDSVSELITQFKPNEFAIEQVFMAKNPDSALKLGQARGAAIVAAACA
ELPVAEYSARQIKQSVVGNGGAEKSQVQHMVMALLNLQRCPQEDAADALA
VALCHAHSSQNLIKMAGAARKTVRGRLR
>IL1370 sbcB, Exonuclease I
MAQNEQETFYWHDYETWGANPLVDRPAQFAGLRTDTDFNVIGRPLTLYAQ
PTPDFLPNPEATLITGITPQLAAKQGVGEAEFSKAIANEFQKPNTTIIGY
NNIRFDDEVTRLLFYRNFYDPYEYSWQNGNSRWDLIDVVRACFALRPDGI
NWPENSDGQPSLKLEHLSVANNIEHGQAHDAMSDVYATIGLAKLISEKQP
KLWQWAYSIRRKQKLLNLFNWQAPEPLAHVSGFYGTANRYLSAILPLGFH
PKQNSNVVAWDLRVPPMDFADKSVEELTELTYTSRRELEEQGLQKSGIQN
IHLGRCPFLAPIKTISAEAADSAALDTAALETNAKWLQENSDFRDKLMQV
FEQTKEFAPRTDVDHQIYDGFFSPQDKKHMEIIRSSEPHQLAGLELDFQD
KRMPALLFRYRARNYPSTLSDKELNKWRLFCQQRLIEPPEGLLSAEGFAL
KLEDLANQHQEDAHKLRLLKSLYDYAASL
>IL1472 seqA, Negative regulator of replication initiation
MKRIDIDDDLYTYIASHTRQIGESASDILRRLLDVNSSEPEADSKSEPTE
SVFNRLNEQDVRIQKSVVARFLYILSMLYRCHPSEFSQVLDIRGRDRQYF
ARSEEALLTSGNSTNPKQIPDSPFWVITNTNTTKKKAMLTQVAEKLGYQS
ADAEKIRDFL
>IL0019 smf, Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake
MGMTRALNKVQKAARECTSWEAIFERWGQSLKPVEARWLNAAENWCRSDY
QGVISYFSEDYPTALKAIANPPWLLYYRGRKELLQGVSVAIVGSRKATHS
GLQIADWFSERLVAAGVVVVSGLAMGIDAQAHKTAADKGKTIAVLGTGID
QYYPRRNKALQDFIAHQGLLISEFPPGQTARIDHFPRRNRIISGISQAVV
VVEAARKSGSLSTAIHALNEGREVGAVPGSVLLPEHQGCHWLIQQGAKLI
NTPQDILDWFSVDDTEVAIEGDTECRDESLANNRLFASLSSEPRTIDDMV
QLSGLEVAEVMEKVVLLELEGLVAAVPGGYIKVGRR
>IL2131 srmB, ATP-dependent RNA helicase
MTPDWEEFDLDDRLIAVLRDAELNKPAKVQQQSIPAALDGRDLLISAPTG
TGKTLAFLLPALQHLLDFPRQQPGPARILVLAPTRELAEQIHEQAKQFEA
KTGLTSVVVTGGINYGSQLSVLEKTHDILVATPGRLMDLLEAEQYNLEGI
EWLIIDEADRMLDMGFAATVKEMALQARHRQQSLLLSATLNSSGVIKFSR
ELLTEPEYIDVQPPKRERGKILQWVHLADTDEHKRKLLMSVLQAHPGRQF
VFVRTRERVELIANFLRSQFGTGRKIVTLRGDMPQSDRQRIMNELKQTTE
ITLVATDIAARGLDVDDITLVVNYDLPKQADVYLHRIGRTARGGQKGTAV
SLVEAHDALLLGRVERYLDAKLDRRTIEGLKPQYKFPSTEKSRSKKKVKK
KTDKKKKSR
>IL0356 ssb, Single-stranded DNA-binding protein
MASRGVNKVILIGNLGADPEVRYTQNSTAIANLSIATSETWKDKQTGEPR
EQTEWHRCVAYRRLAEIAGEYLKKGSKVYVEGRLQTRKWTGQDNVERYTT
EVVINEMQMLDSRGGPQGGAPQQGQGFGGGQQQGGGYGGGQPQQQSQQQQ
RPAPQPAQQQNQQSQQKPAEPAPFSPDNDFDDDIPF
>IL0007 tag, 3-methyladenine DNA glycosylase
MTNNQPERCSWCESADDYRAYHDNVWGRPVSDPIELFAKLCLDGQQAGLS
WLTILRKQSGYEKAFLGFDPQAIVAMSDADRELLYSNRDIIRSKAKIDAI
FTNAEAYIRLEEKGVKFERWLWEFVGGSPIINAYSTQSEIPTETEASQSM
AKALKKEGFKFVGPTICYAFMEAVGMVNDHVTSCHCYQPVADQMKQFTL
>IL2367 tatD, Mg-dependent DNase
MWFDAGVNLTNKRLLSDLDGVMARAEQANVQKQLIISTSIEEAEQAAKLC
HQYPDKLVMTAGIHPHDAGEAPANYKEQLRELAGLPYVVAIGECGLDFNR
NFSPRDVQEEVFVAQVELANELNLPLYLHERDAIDLQIELLNQYCNDSTP
CLTHCFTGGVEALNRYAERGHWFGITGWVCDERRNQELVSALPYLPLNRL
VLETDAPFLLPRGLKPRPKMNEPALLPVVGEALAHYLDVSVKHLAELTYA
NTERFFGLGENSD
>IL2612 tnsB, Transposon Tn7 transposition protein tnsB
MFRINEVVKFHDERFRILESLDEQLVWISLDDEKALPELILISEIYKTID
DDAFERIDDPYNYLAYESPGEGTVARDKRDKNFAVLRPLIELTDFYNPKR
RGPVVDKIVSEFGTTKQTVYRLARRYWQRGQIPNALLPDYKNSGGKGKKR
VAKGKKLGRPRKYLPGTGAIVDEQTERLFRIAIDKYILSDKRHSFPYAHR
RLETMYHNYFPDVAEENLPSLWQLRHFYKREYNQTEALQKRISKKDYSKD
IRPLHGTAASQALGPGSRYEIDATIADVYLVSDSDRGNIVGRPVVYMVID
VFSRMVAGFYIGFENPSYAAALQALHVAISSKSDYCRELGFDITDDEWPC
IGLPDALLADRGELLGHQIENLESSFSMRIENTPPYRGEAKGIVERHFKT
MHESFGPFVPGYVTGNLVKKRGGSDYRLDAKLTITDFTQIVLSSVLQHNQ
FAVLDKYDREVDMPTDLPSTPIHLWNWGIQNRTGRLRQTDSDALKIALLP
RSEVTLSERGVGLFGLYYTASEIVRLGWTHRGRDVKRPKKMMAAYDPLSA
DSIYLFYEKGSNKYWKCSLTEISRQYRGSSFWDVWQLQEEQKKVAAKAKL
AAKESRREHEEFVLDKISQTVSDSPARSDRPKAERIRAINDNRSSEKRLE
RKSKAPKNAQSGNKSADVIPLKESSPDLDYPDYIDELFEDDD
>IL2609 tnsE, Transposon Tn7 transposition transposition regulatory protein tnsE
MPKERKSRCFVKTLPDGMTVYLPQFELARALFFHNAYFSRACMEHGILQN
EFSVEHDATNSEHAVITVLPNSTCPDNVFSDPGYRRYLAWLLLDNDARLS
YESISKAQLESGFNRGSYRIWNFEFEPPPLQGVNLKVRGNLDTETNTLLV
YEITELTGIPTGVPSDVEFFSPKFYVPELSGGRGARGGDYRPPNHEVDED
QDSSGENDPVQIDGVKTKVEFAKAVNTHKTARKRKKVGSSDNSDGSEASS
LVSTEEQSPMGELPSAEWDGLDENTDDMHLYDSKFESFSKMLNYLVTNHN
CRVERLAFRKLPSVGRCKMHLMRDDLAPRCWMLARVTVSGHQFYLMEVDT
SDAAKSLSTKVVMASSAKAVVEHLSEIEIKLLKKSLSWPKDYFDSGFGKD
NHFFIVHQASEKAGSIRQENVRRWANNVCRHLLARV
>IL1010 topA, Topoisomerase IA
MAKSLVIVESPAKAKTINKYLGKDFVVKSSVGHVRDLPTRATETIKSKPA
AEVRKMSPDAKAKYQKERDYKRLIARMGVDPENDWEAHYEVLQGKEKVVK
ELKQLAKKSDEIILATDLDREGEAIAWHLRELIGGDDSRYKRVVFNEITK
KAIQEAFQHPAELNTDRVNAQQTRRFLDRVVGFMVSPLLWKKIARGLSAG
RVQSVAVRLVVEREREIKAFVPEEYWDVHADLNTPADESLRMQVMKQAGK
NFRPSNKQETDAALALLKKAGYEITGREDKPTSSKPSAPFITSTLQQAAS
TRLGFGVKKTMMMAQRLYEAGHITYMRTDSTNLSSEAVDACRELITKDFG
KNYLPDDPVRYGAKSNAQEAHEAIRPSDVKVKSESLASVERDAQRLYELI
WRQFVACQMVPARYDSTTLTATAGDFELKARGRVMRFAGWTKVMPPASSK
KDGDATLPDVKKGDALQLEKLNPEQHFTKPPARYGEASLVKELEKRGIGR
PSTYASIISTIQDRGYVRVESRRFFAEKMGEIVNDRLIENFTELMNYNFT
AEMEQALDDIAAGKRDWKETLDKFYADFKERLEKAELEPTEGGMRENSMV
LTDIDCPECGRKMGIRTASTGVFLGCSGYNLPPKERCTKTLNLTPGEEAI
EVTDEEERETEALRAKKRCPKCGTAMDSYLIDEKRKLHVCGNNPTCDGQL
VEEGTFRIKGYDGPTIECDKCGSEMQLKTGRFGKYFGCTNSECKNTRKLL
RSGEAAPPKEDPVPLPELPCEESDAYFVLRDGASGIFLSANTFPKSRETR
AVTVKELAKFKDRLPEKFKYLAEAPKEDDDGNDAIVRFSRKNKEQYVVTE
IKKKQTGWKAFYRSGKWQVEEK
>IL0050 tra5_1, Transposase Tra5 related protein
MGWSMHHRQDRYMVVRAVEMAVWQRTGNQPVILHSDSGSQFTSGDYQRAL
KFNNLISSMSAVGNCSDNAGCEGFFGILKRERVNYRHYRTRDKARSDIFD
YIERFHNPRMRRRLAKQDQQFSAILNRP
>IL0051 tra5_2, Transposase Tra5 related protein
MSPNGYYAWAAQPPSARDVENQRILTRIKEIHEDSGGVIGAPRMHEDLSI
EGERVSLNRVARLMAVNGFQGWTHKKGRGRKRPAARPAGLKDHLARDFTA
TEPETKWRSQNHRR
>IL1214 tra5_3, Transposase Tra5 related protein
MTKRKKYSPEFKREAVALTKQPGVSCRQVAIEIGINPNLLSRWRREAEPS
SKEAFKGSGNPRDEEMARLKRENARLKKERDFFARSGNVLRKRVVLRYQA
IERCRDKFPIRLMCRCLQVSPSGYYAWAARPPSARDVENQRILTRIKEIH
EDSGGVIGAPRMHEDLSIEGERLSLNRVARLMAVNGVQGWPRKKRRGRKR
QAARPAGLKNHLARDFTAAEPETKWVTDITEVTTTEGKLFLCVVLDLYSK
LIVGWSMHHRQDRYMVIRAAEMAVWQRTGNQPVILHSDRGSQFTSGDYQR
APKFNNLISSMSAVGHCSDNAACEGFFGILKRERVNYRRYRTRDEARSDI
FDYIERFHNPRMRRRLAKQDQQFSAILNRP
>IL1616 tra5_4, Transposase Tra5 related protein
MSPSGYYAWAVRPASARDVENQRILTRIKEIHEDSGGVIGAPRMHEDLSI
EGERLSLNRVARLMAVNGVQGWPRKKGRGRKRQAARPEGLKNHLARDFTA
AEPETKWVTDITEVTTTEGKLFLCVVLDLYSKLIVGWSMHHRQDRYMVIR
AVEMAVWQRTSSQPVILHSDRGAQFTSGDYQRALKFNNLISSMSAVGHCS
DNAACEGFFGILKRERVNYRRYRTRDEARSDIFDYIERFHNPRMRRRLAK
QDQQFSAILNRP
>IL1628 tra5_5, Transposase Tra5 related protein
MKLSQLKAQVGYRKPRHRGGVSHIVTPNRLNRVFNTEQPNQAWVTDVTYI
KTHEGWLYLAVVVDLFSRRVIGWSMQQRMTKELVLDALLMAIWRRKPKQK
VVVHSDQGSQYTSHDWSSFLKSNNLEGSMSRRGNCHDNAVAESFFQLLKR
ERIKRKIYSNRAEARRDVFDYIEMFYNSKRRHSSNDQLSPVEYEKRFEKT
ATECLVN
>IL0522 ung, Uracil-DNA-glycosylase
MPWSTLLAEEKQKPYFQQLWQRVEQARQETVVYPPKEDVFNALKLTDPEN
IKVVILGQDPYHGPGQAHGLSFSVPEGVKFPPSLRNMFKAIAIDYPDTVL
PQHGDLTSWAEQGVLLLNTVLTVEQGNAHSHASWGWETFTDTVISKVSDA
TDHVVFLLWGSHAQKKIPLIDGNKHCILTAPHPSPLSAHRGFFDANHFRK
TNDYLQQHGRQPIRWV
>IL0354 uvrA, Excinuclease ATPase subunit, UvrA
MDTIEVRGARTHNLKNFNLTIPRNKLIVITGLSGSGKSSLAFDTLYAEGQ
RRYVESLSAYARQFLSLMEKPDVDSIEGLSPAISIEQKSTSHNPRSTVGT
ITEIYDYLRLMFARVGEPRCPTHDVPLAAQTVSQMVDNVLSAPEGEKRML
LAPIIQNRKGEHLKVLENLALQGYIRARIDGEICDLSDPPTLELQKKHTI
EVVVDRFKVRDGMEQRLAESFETALELSGGTALVVPMDGDGDAEVYSANF
ACPHCGYSMQELEPRLFSFNNPAGACTTCDGLGVEQFFDPAKVVVNAELS
LTGGAIRGWDKRNFYYYQMLQSLAKHYEFKLSQPFNELPDDIREKILFGS
GKEEIKFTYMNDRGDKVVRAHPFEGIIPNMQRRYRETESQAVRDELSKYV
ATQPCKSCSGTRLRTEARHVFIQGTTLPEVVEQSIGDALEFFQQLSLEGQ
RAQIAEKILKEINDRLRFLVNVGLNYLSLSRSAETLSGGEAQRIRLASQI
GAGLVGVMYVLDEPSIGLHQRDNERLLNTLTHLRDLGNTVIVVEHDEDAI
RQADHVIDIGPGAGVHGGEIIAQGQVEDIVGSEDSLTGDYLSGRKEIEVP
KQRHKPDKRRLTIHGASGNNLKNVDFNLPLGIMTCVTGVSGSGKSTLVNN
TLFHIAHRELNGATTGEPAPYKSVDGMQLLDKVVDIDQSPIGRTPRSNPA
TYTGIFTPIRELFAGVPESRARGYKPGRFSFNVRGGRCEACQGDGVIKVE
MHFLPDVYVPCDICKGQRYNRETLEVQYKGKNIHEVLDMTIEDAREFFDP
VPAIARKLQTLMDVGLSYVRLGQSATTLSGGEAQRVKLSRELSKRDTGKT
LYILDEPTTGLHFHDIKQLLAVIHRLRDHGNTVVVIEHNLDVIKTADWII
DLGPEGGSGGGEILCEGTPEDICENERSHTARFLKPMLKLS
>IL1789 uvrB, Helicase subunit of the DNA excision repair complex, UvrB
MAKKFELVSKYKPAGDQPKAIESLLDNLDAGLAHQVLLGVTGSGKTFTMA
NVIERSQRPTLILAHNKTLAAQLYGEMKEYFPNNAVEYFVSYYDYYQPEA
YVPTTDTFIEKDASINDHIEQMRLSATKALMERRDVVLVASVSAIYGLGD
PESYMKMMLHLRRGDIIDQRDVLRRLAQLQYKRNDAAFERGTYRVRGDVI
DIFPAESEEIAVRLELFDSEVDRISFFEPLTGQITEKDVARATIYPKTHY
VTPREVLVKAIEKIKDELKDRRDILLKQNKLIEEQRINQRTQFDIEMMLE
LGYCSGIENYSRYLSGRAPGEPPPTLMDYLPDNALLIIDESHVTVSQIGA
MYKGDRSRKENLVEYGFRLPSALDNRPLKFDEFEAIAPQTLYVSATPGKY
ELERSGNEVVEQVVRPTGLIDPQIEVRPVATQVDDLMSEIRLRTEVGERV
LATTLTKKMSEDLADYLDEHGIKVRYLHSDIDTVERMEIIRDLRLGKFDV
LVGINLLREGLDMPEVSLVAILDADKEGFLRSDRSLIQTIGRAARNVNGR
AILYADRITGSMQRAMDETDRRREKQIAYNKEHGITPQGLNKDITDVMDL
GQGSAKARKSKAEKALAEVASGYDARTVVVKDAKAVMKEIDAKEKEMYKA
AQNLEFEQAGKLRDEVAELREQLKRAV
>IL0653 uvrC, Nuclease subunit of the excinuclease complex, UvrC
MTEGNQQKQFDSDSFLRHLTHQPGVYRMYDESGDVIYVGKAKDLRKRVSS
YFREKVDRMKTQVLVKQIASMDVTVTNTEAEALILENSFIKKYRPRYNVL
LRDDKSYPYIILTSHQHPKLGFHRGARRAKGDYFGPFPNGSAVRESLNLL
QKLFPIRQCDDSYYRARTRPCLQYQLKRCLAPCVNVCTDDEYNEQVALAK
QFLQGKNQQVIDELMNKMEQASTDLDFERAARFRDQIAALRKTQERNSVT
GSQQELDVIGLARGNGMTTVQMLFIRDNHLQGSRSYFPKVPTDTPDDEVL
RAFLLQFYLSDTAGRKIPREVVLPVDVQPDNVLAEVMSDALSQPVKLQSS
VRGDKRQYQSLAQKNAVNALESRLNQQSTMNRRTQALQQVLEFGVPIQRM
ECFDISHTMGQQTVASCVVFDQNGPKKSDYRRYNITGITPGDDYAAMSKA
LAKRYDNAKEQGNIPDILFIDGGKGQLAQAENYFNDWGKEAPVLIGVAKG
ESRKPGLETLIMAGSHETIPLSKDASALHLIQHIRDESHRFAITGHRQKR
AKVKKTSTLEQIDGVGAKRRQAILKNLGGLQEVKNASIDKLASVPGISRS
LAEKIYYSFRDE
>IL2551 uvrD, Superfamily I DNA helicase, UvrD
MSTHPLLADLNERQQQAVSATDGHMLVLAGAGSGKTRVLVHRIAWLIQER
QYSPFSILAVTFTNKAAAEMRGRVEQLVGSSVRGMWIGTFHGLAHRLLRA
HYMDVGLPQNFQIIDSDDQQRLIKRLIKSLNLDDKRWPAKQAQWYINGKK
DEGLRPQHIETYDPTEQTLKEIYTLYQESCDRAGLVDFAELLLRAHELLR
NNRIVREHYQNRFRHILVDEFQDTNSIQYAWIRLLAGSQNSVTIVGDDDQ
SIYGWRGAKVENIHQFLSDFEGSETIRLEQNYRSTSTILRAANSVISNNS
GRLGKDLWTDGNDGEPISLYAGFNEMDEARYIVARIEEWRDQGGSLQDSA
ILYRSNAQSRILEEALLHARVPYRIYGGLRFFDRQEIKDALAYLRILGNR
DDDAAIERVINTPTRGIGNRTMDMIRQAAREREESLWQAAKYMVNEKQLA
GRARNAVGSFLDFIENLDDETEEFSLGRLSDEVIKKSGLMAMYEAEKGEK
AETRVENLKELVTACENFTLDDDEEDMTPLNAFLAHASLEAGEEQADEYQ
DAVQLMTLHSAKGLEFPLVFMTGVEEGLFPSQQSMDEPGRLEEERRLCYV
GMTRAMEKLVLTYAEQRRIYGQELFHKVSRFISEIPADTLHEVRLQTRVE
KPASYGRFNNAASHESFEQTGYSLGQRVRHPKFGEGTVLNYEGTGPQSRI
QINFDNVGSKWLVVAYARLDPVF
>IL2527 vsr, DNA mismatch endonuclease, patch repair protein
MADVHNTEQRRKNMRAIKSRDTSIEIQVRRILWHAGYRYRLNVKALPGKP
DIYLPKYRAVIQINGCLWHGHNCPQFVLPKTRTEFWRNKIKDNVRRDLKS
VAALHDKGLRLLVIWECALQGKARLDNRYTYNLLNRWLSSTELLANIDKQ
GLSSTTLYEFKSQINPSLTES
>IL2553 xerC, Site-specific recombinase XerC
MKLHDWQQKWMQQLQGERGLAELTLKNYQRLIAADLTALELQKITEPKAL
RVPVIERLLVGWRRNGLGERSIALKLSAWRTFCQFMVESNAMDDNPAMSV
SAPKIPKRLPKNLDVDSISHLLDLPTDDDLAIRDAAMMELLYASGIRLAE
LVSLDLDHIDHRMMQLRVTGKGSKTRIVPFGRCAEKALKKWLSVRQAWLN
QKPELALFVSKRLQRISPRTVQQRLNYWGKQQGVVGDLHPHKLRHSFASH
MLESSGDLRAVQEMLGHANLSTTQVYTHLDFKRLASVYDSAHPRARKKST
>IL0826 xerD, Site-specific recombinase
MKQLRPEDEDRIDAFTEHLWLHHGSSNNTQAAYRSDLRRYCEYLLSLKKS
LMDTDEVVLQDYLLWRRMQGLSPRSTSRFLSSTKKFFQFAVKQQWVAVDP
TARLKRPKLPQSIPHSLSEEDVISLLEQPDTETPIGLRDRTMLEVLYATG
LRVTELIRLQYDQLSRQQGLVRVIGKGNKERLVPLGEDALEWLDNYLKHG
RPAITDKSSPWIFVTQRGSLLTRQAFWYRLKHYAEEAGIYAHLSPHTLRH
AFATHLLNHGADLRVLQLLLGHSDLSTTQIYTQVARERLQALHAQHHPRG
>IL2012 xseA, Exonuclease VII, large subunit
MVYSVRQLNTEIRQLLEQGFGQISLVGEISNFAAPGSGHWYFTLKDERAQ
VRCAMFRNANQRAKVRPQNGMQVLVRAKVTVYEPRGDYQLIIEQVEDAGQ
GLLQQRYEQLKEKLSAEGLFAAERKRLLPDHIRKVGVLTSPTGAAIKDIL
AVMKRRDPGVEVIIYPSAVQGEAAVPQLQAMLKTAFERNEVDVLLVSRGG
GSLEDLWCFNDETFARLLATAPMPTISAVGHEIDFTIADFVADVRAPTPS
AAAELVTRDQQQQQQKAQALQQRLGLAQQRLLQRLQQRWQFLQTRLQQQH
PQRQLQQQSQLADELQARANRALQNRLARQKQQVSYLHGRLQAMHPQKEL
QRLQQKLQTQQQRLPQVMQRVLKDKRTQQQQLMQALNLVSPLNTLERGYA
IVRTEKGDVVRSEKQVTVGESIEVRLADGNITAKRQ
>IL1451 xthA, Exonuclease III
MKIISFNINGIRARLHQLQAVIDKHQPDVIGLQETKVHDDQFPLKDVEAM
GYHVIYHGQKGHYGVAMLSKKPLENPQFGFPTDDDEAQRRMIMGDYPLAD
GGHVRILNGYFPQGESRDHPTKFPAKEKFYQDLMSYLDNDLSPEQPVIVM
GDVNISRIDLDIGIGENNAKRWLKTGKCSFLPEEREWIQRLMDWGFTDTY
RQLNPDVDNQFSWFDYRSRGFDDNRGLRIDLILATKALAKQCEDSGIDYE
LRGIEKPSDHAPVWSTFKD