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# Helicobacter pylori 26695, 26695

>gid:16  HP0012  DNA primase (dnaG)
MILKSSIDRLLQTIDIVEVISSYVNLRKSGSSYMACCPFHEERSASFSVN
QIKGFYHCFGCGASGDSIKFVMAFEKLSFVEALEKLAHRFNIVLEYDKGV
YYDHKEDYHLLEMVSSLYQEELFNAPFFLNYLQKRGLSLESIKAFKLGLC
TNRIDYGIENKGLNKDKLIELGVLGKSDNDQKTYLRFLDRIMFPIYSPSA
QVVGFGGRTLKEKAAKYINSPQSKLFDKSSLLYGYHLAKEHIYKQKQVIV
TEGYLDVILLHQAGFKNAIATLGTALTPSHLPLLKKGDPEILLSYDGDKA
GRNAAYKASLMLAKEQRRGGVILFENNLDPADMIANGQIETLKNWLSHPM
AFIEFVLRRMADSYLLDDPLEKDKALKEMLGFLKNFSLLLQSEYKPLIAT
LLQAPLHVLGIRERVSFQPFYPKTEKPNRPQRFAHVSSAPSLEFLEKLVI
RYLLEDRSLLDLAVGYIHSGVFLHKKQEFDALCQEKLDDPKLVALLLDAN
LPLKKGGFEKELRLLILRYFERQLKEIPKSSLPFSEKMICLKKARQAIMK
LKQGELVAI
>gid:40  HP0036  H. pylori predicted coding region HP0036
MFHKALITFIVLWFFLNGLGAYDFKHCQAFFKKASLQKGGVALKELPKGV
YLYYSKTYPKHAKVIKSDPFVGLYLLQSAPSEYVYTLRDLDKDALIRPMA
SIGDKEALETRLLVGQRGYERYAQISQKTQKNGVISNICYQMLGLGVGGN
GFIETKFIKRFLNQQEPYYGDIGVRLEEHHKRLVVVQFDPFFPKNPFLKN
DEILAINHQKIHSLAEFEWVVSNLKYQSLAKVEIKRNHKVKEVTLKVNKR
YGGFLLKDTFLERYGIALDERFIITKIGAHLPKGLDFLKLGDRILWVNYK
SVASNPKALREALSAPKIELLVLRKGFEFYIKVR
>gid:54  HP0050  adenine specific DNA methyltransferase (dpnA)
MIQIYHADAFEIIKDFYQQNLKVDAIITDPPYNISVKNNFPTLKSAKRQG
IDFGEWDKNFKLLEWIARYAPLVNPNGCMVIFCSYRFISYIADFLEENGF
VVKDFIQWVKNNPMPRNIHRRYVQDTEFALWAVKKKAKWVFNKPKNEKYL
RPLILKSPVVSGLEKTKHPTQKSLALMEKIISIHTNPNDIVLDPFMGSGT
TGLACKNLERNFIGIESEKEYFQTAKKRLNLF
>gid:55  HP0051  cytosine specific DNA methyltransferase (DDEM)
MNYKILDLFCGAGGFSAGLECLEEFDALIGLDCDKQALITFENNHKNAIG
VCGDITQTEIKEKVIKLAKKLEINMIIGGPPCQGFSNKGKNLGLKDPRNF
LFLEYIEIVKAIKPEIFIIENVKNLISCAKGYFLEEIKERLNALGYQLSY
QILNAKDYGVPQNRERAFIVGASRFSFDFNLLEPSQSVNVQDAISDLAYL
CSNEGAFESDYLNPIQSSYQALMRKDSPKLYNHQATNHSQAALEKLKLIN
KEQGKECLPKNLHGKQQFKSTWGRLNWNKISPTIDTRFDTPSNGTNSHPE
LHRSITPREAARIQSFSDNYIFYGNKTSVCKQIGNAVPPLLALALGKAIL
KSLRK
>gid:58  HP0054  adenine/cytosine DNA methyltransferase
MLFDQTLTYISLFSGAGVGCYGLLEEGFECVATNEILEKRLNIQRINRKC
KLDESYISGDIKKPETKEKILKQIEFYSKKFGNDRVDLVVATPPCQGMSV
ANHKKKNDEIKRNSLVVESIDLIKQIKPRFFILENVPSFYKTGCIDKNDN
LLEIGSMIEQNLSGDYMLYDEVINFKNFGANSSRTRTLVIGVCKEFKDFI
SALEFFPDFKQEKTLKEVIGSLKPLAWGEYDNTDFYHSFRTYPKHMQEWI
KDLKEGQSAFENTELNKKPHRIVGSKIVLNVSKNGDKYKRQKYHSVAPCI
HTRNDQMASQNTIHPKDDRVFSIRELMLLMNIPSRFKWLDLELQELNALN
QQEKEKISKQNEMNIRQSIGEAVPTIIFKQIAIKIKNFMSQTHLEPKEII
RLIDVHHLLEPQNLKRFILENQNKIARASLVSLAEMSNSKRIEKSAYFTN
PFIINEIAKLLPSFKQESVTIIEPSAGCGNFLSALFKKYTSVKKVYLKCI
DIDKNSLEILEILYKDCIPNNFEMELICKDFLAYECGKVDLIVGNPPFGK
THERFKDYSLRLTHLAGIFLEKSLKLANFTAMVMPKNLLNTKEYAETRTK
LEKKGVGAILDFGELGFKGVLVETIAIVTQKSKEVLARSLPLNLSIKQKP
SYIFDKQLPYWVIYRNAFFDKVFHSMQFGLFEVFRDRQITNSVLVKNGIR
VIKSRNIDENGKIISIENYDSYIQKEVLSPFKIASFLDRDDVYLTPNMTY
KPRILKKEKGYVVNGSVAILIPKNPISLSKKQCDYISSVEFRDFYKIARN
YQTRTLNIDSMSCFWFGILRSSL
>gid:65  HP0062  H. pylori predicted coding region HP0062
MSRVQMDTEEVREFVGHLERFKELLREEVNSLSNHFHNLESWRDARRDKF
SEVLDNLKSTFNEFDEAAQEQIAWLKERIRVLEEDY
>gid:68  HP0065  H. pylori predicted coding region HP0065
MFSHEVYLEGCTLELRKICDDFEKNAMQDDLGQKLRSDVLEDMLKIAHDL
ENLEDDTQYQRRIIDEQIEEAKSLMRQIDMNFHPSSEIDRLMREAKEHER
EASKRYDEYLKSKDKND
>gid:97  HP0092  type II restriction enzyme M protein (hsdM)
MVIAHSNEIARPIFKSQDQLFTLYQGDCNEVLPQFENQFDLIFADPPYFL
SNDGLSIQSGKIVSVNKGDWDKEDGINGIDEFNYQWINNAKKALKDTGSL
LISGTYHNIFSLGCVLQKLDFKILNLITWQKTNPPPNFSCRYLTHSAEQI
IWARKSRKHKHVFNYEVLKKINNDKQMRDVWSFPAIAPWEKVNGKHPTQK
PLALLVRLLLMASDENSLIGDPFSGSSTTGIAANLLKREFIGIEKESEFI
KISMDRKIELDARYKEIRSKIKDLNHQ
>gid:121  HP0116  DNA topoisomerase I (topA)
MKHLIIVESPAKAKTIKNFLDKNYEVIASKGHVRDLSKFALGIKIDETGF
TPNYVVDKDHKELVKQIIELSKKASITYIATDEDREGEAIGYHVACLIGG
KLESYPRIVFHEITQNAILNALKTPRKIDMSKVNAQQARRFLDRIVGFKL
SSLIASKITKGLSAGRVQSAALKLVIDKEREIKAFKPLTYFTLDAYFESH
LEAQLISYKGNKLKAQELIDEKKAQEIKNELEKESYAISSIVKKSKKSPT
PPPFMTSTLQQSASSLLGFSPTKTMSIAQKLYEGVATPQGVMGVITYMRT
DSLNIAKEALEEARNKILKDYGKDYLPPKAKVYSSKNKNAQEAHEAIRPT
SIILEPNALKDYLKPEELRLYTLIYKRFLASQMQDALFESQSVVVACEKG
EFKASGRKLLFDGYYKILGNDDKDKLLPNLKENDPIKLEKLESNAHVTEP
PARYSEASLIKVLESLGIGRPSTYAPTISLLQNRDYIKVEKKQISALESA
FKVIEILEKHFEEIVDSKFSASLEEELDNIAQNKADYQQVLKDFYYPFMD
KIEAGKKNIISQKVHEKTGQSCPKCGGELVKKNSRYGEFIACNNYPKCKY
VKQTESANDEADQELCEKCGGEMVQKFSRNGAFLACNNYPECKNTKSLKN
TPNAKETIEGVKCPECGGDIALKRSKKGSFYGCNNYPKCNFLSNHKPINK
RCEKCHYLMSERIYRKKKAHECIKCKERVFLEEDNG
>gid:147  HP0142  A/G-specific adenine glycosylase (mutY)
METLHNALLKWYEEFGRKGLPFRNLKGINAPYEVYISEVMSQQTQINTVI
ERFYSPFLEAFPTLKDLANAQLEEVLLLWRGLGYYSRAKNLKKSAEICVK
EHHSQLPNDYQSLLKLPGIGAYTANAILCFGFREKRACVDANIKRVLLRL
FGLDPNIHAKDLQIKANEFLNLNESFNHNQALIDLGALICSPKPKCAICP
FNPYCLGKNHLEKHTLKKKQEIIQEERYLGVVIQNNQIALEKIEQKLYLG
MHHFPDLKENLECKLPFLGAIKHSHTKFKLHLNLYSAAIKDLKNPVRFYS
LKDLETLPISSMTLKILNFLKQKNLFGG
>gid:157  HP0153  recombinase (recA)
MAIDEDKQKAISLAIKQIDKVFGKGALVRLGDKQVEKIDSISTGSLGLDL
ALGIGGVPKGRIIEIYGPESSGKTTLSLHIIAECQKNGGVCAFIDAEHAL
DVHYAKRLGVDTENLLVSQPDTGEQALEILETITRSGGIDLVVVDSVAAL
TPKAEIDGDMGDQHVGLQARLMSHALRKITGVLHKMNTTLIFINQIRMKI
GMMGYGSPETTTGGNALKFYASVRIDIRRIASLKQNEQHIGNRAKAKVVK
NKVAPPFREAEFDIMFGEGISKEGEIIDYGVKLDIVDKSGAWLSYQDKKL
GQGRENAKALLKEDKALADEITLKIKESIGSNEEIMPLPDEPLEEME
>gid:246  HP0242  H. pylori predicted coding region HP0242
MRDYSELEIFEGNPLDKWNDIIFHASKKLSKKELERLLELLALLETFIEK
EDLEEKFESFAKALRIDEELQQKIESRKTDIVIQSMANILSGNE
>gid:251  HP0247  ATP-dependent RNA helicase, DEAD-box family (deaD)
MELNQPPLPTEIDGDAYHKPSFNDLGLKESVLKSVYEAGFTSPSPIQEKA
IPAVLQGRDVIAQAQTGTGKTAAFALPIINNLKNNHTIEALVITPTRELA
MQISDEIFKLGKHTRTKTVCVYGGQSVKKQCEFIKKNPQVMIATPGRLLD
HLKNERIHKFVPKVVVLDESDEMLDMGFLDDIEEIFDYLPSEAQILLFSA
TMPEPIKRLADKILENPIKIHIAPSNITNTDITQRFYVINEHERAEAIMR
LLDTQAPKKSIVFTRTKKEADELHQFLASKNYKSTALHGDMDQRDRRSSI
MAFKKNDADVLVATDVASRGLDISGVSHVFNYHLPLNTESYIHRIGRTGR
AGKKGMAITLVTPLEYKELLRMQKEIDSEIELFEIPTINENQIIKTLHDA
KVSEGIISLYEQLTEIFEPSQLVLKLLSLQFETSKIGLNQQEIDAIQNPK
EKTPKPSNKKTPQHERARSFKKGQHRDRHPKTNHYSKKPKRR
>gid:264  HP0259  exonuclease VII, large subunit (xseA)
MDVLSVSEINAQIKALLEATFLQVRVQGEVSNLTIHKVSGHAYFSLKDSQ
SVIKCVLFKGNANRLKFALKEGQEVVVFGGISVYVPRGDYQINCFEIEPK
DIGSLTLALEQLKEKLRLKGYFDEENKLPKPHFPKRVAVITSQNSAAWAD
MKKIASKRWPMCELVCINTLMQGEGCVQSVVESIVYADSFHDTKNAFDAI
VVARGGGSMEDLYSFNDEKIADALYLAKTFSMSAIGHESDFLLSDLVADL
RASTPSNAMEILLPSSDEWLQRLDGFNVKLHRSFKTLLHQKKAHLEHLVA
SLKRLSFENKHHLNALKLEKLKIALENKTLEFLRFKKTLLEKISTQTLTS
PFLQTKTERLNRLENALKLAHANLKLPQFGALVSKNNQAIELEALKRGDK
IELSNEKTRASAEILSVDRV
>gid:265  HP0260  adenine specific DNA methyltransferase (mod)
MHKVFIMEALECLKRIEKESIQTIYIDPPYNTKSSNFEYEDDHADYEKWI
KEHLILAKAVLKQSGCLFISMDDNKMAEVKIIANEIFGTRNFLGTFITKQ
ATRSNAKHINITHEYVLSYAKNKAFAPGFKILRTLLPIYARALKDLMRTI
KNVFKQKGQAQAQLVLKEQIKELSQKEHFNFLKNYNLVDEKGEIYFAKDL
STPSNPRSVAIEEINLFLEPLKSRGWSSDEKLKELYYQNRLIFKNNRPYE
KYYLKESQDNCLSVLDFYSRQGTKDLEKLGLKGLFKTPKPVALIKYLLLC
STPKDSIILDFFAGSGTTAQAVIEVNRDYCLNWSFYLCQKEEKIKNNPQA
VSILKNKGYQNTISNIMLLRLEKIIKRSEYEILR
>gid:268  HP0263  adenine specific DNA methyltransferase (hpaim)
MKPYFSLEKLDLYHGDVSVLETFEKGFYDLCITSLPYNLSIEYQGSDDFR
AYDDYLNWCKNWLKNCYFWGKEQARLCLNVPLDTNKHGKQSLGADIIAIA
KECGWKYQNTIIWNESNISRRTAWGSWLQASAPYAIAPVELIVVFYKNEY
KRQKQTSTISKEEFLLYTNGLWNFSGESKKRLKHPAPFPRELPRRCIQLF
SFLEDTIFDPFSGSGTTILEANALGRFSVGLKIEKEYCELSKKRILESLS
LV
>gid:339  HP0333  DNA processing chain A (dprA)
MNQRMKSHFQYSTLENIPKAFDILKDPPKKLYCVGDTKLLDTPLKVAIIG
TRRPTPYSKQHTITLARELAKNGAVIVSGGALGVDIIAQENALPKTIMLS
PCSLDFIYPTNNHKVIQEIAQNGLILSEYEKDFMPIKGSFLARNRLVIAL
SDVVIIPQADLKSGSMSSARLAQKYQKPLFVLPQRLNESDGTNELLEKGQ
AQGIFNIQNFINTLLKDYHLKEMPEMEDEFLEYCAKNPSYEEAYLKFGDK
LLEYELLGKIKRINHIVVLA
>gid:340  HP0334  conserved hypothetical protein
MILACDVGLKRIGIAALLNGVILPLEAILRHNRNQASRDLSDLLREKNIQ
VLVVGKPHESYADTNARIEHFIKLVDFKGEIVFINEDRSSIEAYENLEHL
GKKNKRLAIKDGRLDSLSACRILERYCQKVLKNH
>gid:354  HP0348  single-stranded-DNA-specific exonuclease (recJ)
MKQKLKAQIKERMASIAYNEKGFPSPFLFKDLKKAALKIIEAMRTNTEIL
VVGDYDADGVISSAIMAKFFESLNYKHVRIAIPNRFMDGYGISKKFLEKH
HAPLIITVDNGINAFEAARFCKEKNYTLIITDHHCLHHDEVPDAYAVINP
KQPDCDFIQKEVCGALVAFYLCYGIHQLLGKEKSHSSELLCLAGVATIAD
MMPLTFFNRFLVSKALYFLQKESLGAMGFLRQREVFRKRSLKASDISFNI
APLINSAGRMQDAKMALDFLSANNSQDGYSLYERLKACNLKRKMIQQQVF
EEAFKHAMVGEKIIVAFKDNWHEGVLGIVASKLVEATQKPSLVFTFKEGV
YKGSARSSSNIDLIDALNGVSSLLLGYGGHRQACGLSVEKNNIISLFETL
ENFDFKVLPFCKTEPPLTLKLKDIDRELLEIIEMGEPYGQENPEPLFQAK
NLEVIEEKIIKESHQVLRFKDKECVKEAIYFSAERFLKAGEKVSVLFSVE
LDECSNEPKMFVKSLL
>gid:362  HP0356  H. pylori predicted coding region HP0356
MAKHKNYEILNLIGYALAKFDNDFIKEFGFSTKNAFFEYCVQIGLADTTG
VIKNRMDLFDYFFPNKRKGWWQKGDAYIHRKLWIDSLFKDEDAKGFSHIV
KWFLQEQYGVKDLGITPNAYLKTRYKSMQETGLEAELYFLNHYKNIKIFS
CGHLKDMRLFGDGYDFYIQTNKQAFLVEVKGIREKQGTLRLTQKEYEQAQ
TYSHDYVLVVVLNLSEKPHLLSIANPLKHLEFKACERKQKSILEYHLIGQ
IK
>gid:376  HP0367  H. pylori predicted coding region HP0367
MSKISNNYNPSLMVRDYHTQRVGSHTKNGEKEENKEIQNLSENDEKIKLA
KQAKQDNLAIGDLESRLKSLKGMDKDAKELVGISKAYAHNNEKDRSDFEH
FKSRLDKAIDSFNQKSGNDNLKLPGNIDIDDTKALEKFSKSLESEKENIQ
NSLHQWKKQLAETNHLNKEYNTLDKTRLNAQKFQDVHDTSKITPSRLQDL
LA
>gid:396  HP0387  primosomal protein replication factor (priA)
MFYHLIAPLKNKTPPLTYFSKEQHQKGALVNIPLRNKTLLGVVLEEVSKP
SFECLELEKTPYFLLPFQMELAIFIAQYYSANLSSVLSLFAPFKECDLVG
LEKIEPILNILSQTQTNALKELQKHSASLLFGDTGSGKTEIYMHAIAQTL
EQKKSALLLVPEIALTPQMQQRLKRVFKENLGLWHSKLSQNQKKQFLEKL
YSQEIKLVVGTRSALFLPLKELGLIIVDEEHDFSYKSHQSPMYNARDLCL
YLSHKFPIQVILGSATPSLNSYKRFKDKALVRLKGRYTPTQKNIIFEKTE
RFITPKLLEALQQVLDKNEQAIIFVPTRANFKTLLCQSCYKSVQCPFCSV
NMSLHLKTNKLMCHYCHFSSPIPKICSACQSEVLVGKRIGTMQVLKELES
LLEGAKIAILDKDHTSTQKKLHNILNDFNAQKTNILIGTQMISKGHDYAK
VSLAVVLGIDNIIKSNSYRALEEGVSLLYQIAGRSARQISGQVFIQSTET
DLLENFLEDYEDFLQYELQERCELYPPFSRLCLLEFKHKNEEKAQQLSLK
ASQTLSSCLEKGVTLSNFKAPIEKIASSYRYLILLRSKNPLSLIKSVHAF
LKSAPSIPCSVNMDPVDIF
>gid:415  HP0406  H. pylori predicted coding region HP0406
MDILDLNKAQAVQQNEQEVEDKERESKEPVVLEDLSALAWLELEEFSRLS
GLPKERILELVNLGKIKSKISSNKLLIDASSGTNALIKKVENSLISMDMN
GRSLEPVFVEKTINTILNLHDKVIGAKDETISAFKNENMFLKDALISMQE
VYEEDKKTIDLLRDELNQAREEIEFMKRKYRLMWGKVADMSSVNKK
>gid:426  HP0413  transposase-like protein, PS3IS
MKVNKGFKFRLYPTKEQQDKLQHCFFVYNQAYNIGLNELQEQYETNKDSP
PKERKYKKSSELDNAIKQCLRARDLPFSAVIAQQARMNVERALKDAFKVK
NRGFPKFKNSKSAKQSFSWNNQGFSIKESDDECFKTFTLMKMPLLMRMHR
RLPPNFKVKQISISCSHRKYFVSFSVEYEQDITPIKNTKNGVGLDLNILD
TACSCEINNHDKLTDFKQYQTDMKELLGIEIDEELDTKRLIPTYSKLYSL
KKYSKKFKRLQRKQSRRC
>gid:427  HP0414  IS200 insertion sequence from SARA17
MKKIDDMRHGRHCVFLMHVHFVFVTKYRRSAFNKEVIDFLGSVFAKVCKD
FESELVEFDGESDHVHLLINYPPKVSVSKLVNSLKGVSSRLTRQHHFKSV
EASLWGKHLWSPSYFAGSCGDAPLEMIKQYIQDQETPH
>gid:438  HP0425  H. pylori predicted coding region HP0425
MPKKELLKMSKKRIFKDFLKEAKQHRPIVFYTDNDCDGMLAGSVLMSMCY
RLGIKDFFFFSPLRNAHGYGFTDLALNDLLSQPCIFNPKTNQLVRLDCIK
NQFQKNPLLFSADLGADLAANTELQEILLEHFEQCIITDHHKSFEVDWID
ENKIAYINLNDEKDANYYSGAFTSALVFSQIFQTQTTPLEEELIAITLLS
DRIDLDHGDNLDMVLSLAQAKHERIKCFFKDKDLSLAQDDLDEISNLYGF
NCINYINALSRLSGAREFKGCYDSYLHYLVLKHFNPINDPRLSVFNVKEF
KRYNDIKKKMVKESEENAQIFPCNKILVALLDESCSTKVGVSGLVANNFL
KKYPSNRSLCIYRDNKDGYSGSARGGGNFLSQIKTIPLIQAGGHEEAFGL
SFAKEDFKKVIKSLQAL
>gid:447  HP0432  protein kinase C-like protein
MELEEIVDSERNIHKTIEVLGKGGQGIVYRCLDKDVAIKVVLRDGDFIKD
KESLKQYEKSVLNLSFKPIESHFPMSIPLVTLKEKQGYVMKMAEGYEPLK
TFLKKPSILENEEKDGIFRINNAIQELCKDNHYMTLSLSYYSQTQGLRSR
LKILTHLAKLLFRLQSKGLVYGDLNLNNVFYKDNSAFLIDADNVRYESEK
ALCVIFTPNYGALEISQTSKNSDTTNYNTMLSDTFSFAIITYELLNMVHP
FDGNKADDSVENFIELPWIEDRKDDSNRSCGLLPFFLTRDLKNLLA
>gid:449  HP0434  H. pylori predicted coding region HP0434
MLSFIKEDSIIKAYNLNTAKLEPKDREKLGLLKIEKNKIYFHLDEKRYLK
LEIIGKTKEKEIKNAFCSNAFLAAQVLNLNQERQVLELKCHFFKHPIKIL
PEPLNINFKDTIIKKLLKDMGKDKKIEDFKETCILKIAGFTYFVCVLPYE
YENKEDKENSEEILKEDFRLLNTKGGLSVKRALINNRHSYEAIKLRPIKQ
ELVPGLCLFFQGSLEFNDKTTKTMRTSLLDQIQQDDKSYLKIWEKYLIKS
AQKSFNEAKEVGVLEIESVSKEGGNLRIRFKPALGKNKMEILKKSQFKKG
SDLGVLEDLDPQNEENLINLISEQKKQISKNNSQSIMIEDISGDDFIIDY
DLSIKEGDAFHLNYMGDLNTLKKQYSALDKTKKGLKRQS
>gid:450  HP0435  H. pylori predicted coding region HP0435
MDEVLKEILSSYQKRALKLTKRVRKKIFKNDPTENQKKAIKIALNTPDIA
IIQGPPGTGKTTVINAICERLFEEYPKDKNIKGQILLCAQGHDATNNARE
RIKVGGLPTFKFGAKKNAKEEQYKQDERLNERLREFAETLIESVRKKLQK
LGDYENIEKILDLEEALRRYYSSPISELEFLKEIEKNESFF
>gid:451  HP0436  H. pylori predicted coding region HP0436
MRAFFNSSMREKLSQLKARQQKQEMPANLSIIHALRATQEGFEDDGVMRN
YDLLESQFKENLTKEDRELLESPKPNLEKLQELKIRLLEKNGIFKPPKQK
SQISLVFGMNALVPLGTIKTL
>gid:452  HP0437  IS605 transposase (tnpA)
MRKNHYPLRGYISTNRSKHNLKAHLILVCKYRKKLLQGDLNNFIKSVIDE
IATQSNFIIIAMESDIDHLHLMVQYIPRMSISSIISRIKQITTYRVWRDK
RFIPLLQKHFWKEKTFWTDGFFVCSIGEANPETIKAYIENQG
>gid:453  HP0438  IS605 transposase (tnpB)
MLNAIKFRIYPNAQQKELISKHFGCSRVVYNYFLDYRQKQYAKGIKETYF
TMQKVLTQIKRQEKYHYLNECNSQSLQMALRQLVSAYDNFFSKRARYPKF
KSKKNAKQSFAIPQNIETKTETQTIALPKFKEGIKAKLHRDLPKDSVIKQ
AFISCIADQYFCSLSYETKEPIPKPTIIKKAVGLDMGLRTLIVTSDKIGY
PHIRFYQKLEKKLTKAQRRLSKKVKDSNNRKKQAKKVSRLHLACSNTRDD
YLHKISNEITNQYDLIGVETLNVKALMRTYHSKSLANASWGKFLTMLEYK
AQRKGKTLLSIDRFFPSSQLCSYCGVNTGKKHESITKFTCPHCQTTHHRD
YNASVNIRNYALGMLDDRHKVKTDKARVGIIRSDYTHHTNECVKACGASS
NGVSSKYGNILDLASYGAMKQEKAQSL
>gid:455  HP0440  DNA topoisomerase I (topA)
MKDSVIIIESPNKVEKIKQLTGAEVYATIGHFTNLIGVDIENNFACKFEI
KEDKAKKINFLINACRDKKVYIATDPDREGYGIGYQFYEKIKNVASEIYR
AEFHEITPSGIESGLKNAVLFSRSNTNLYQSFLGRIASDQVVGFALTSYL
RKSLNLSELSAGRVQTPALALICQRDQEIRDFDKLDAEEKVEYQIQANIV
CNEKEAIIKHVRANEKNELVDFKFKDKNEASQFLKDLKDGLGSMSVLVSL
KESLSNKEPKKPFTTSKLLSQASKSLKIPTKEIAQLAQKLFEAGLITYHR
TDSEFLSPEYLKEHEVFFEPIYPSVYQYREYKAGKNSQAEAHEAIRITHP
HALKDLEKVCSDAKISEELALKLYQLIYTNTICSQSRNALYNQYDCIFKI
KSESFKLSFKLLKEKGFLEIEELIQGKEEINREEQESEIENFSLKENDSV
PLKEVFIKKIEKPSPKPYKESAFIPLLESEGIGRPSTYASFLDLLLKRKY
ISIDTKTNAITPTSQGLEVISFFKKDKEVDFIALTSKDKSKLGNTTKQFE
ECLDLIMRGEASYEKFMLEVISKLKSTAKFYQTQSTDNNMPTDKQLELID
KICKDKKLQKPSQEILQNKEKCSDWIAEHVKEKPSQKQLNLVKKICEECK
LAMPTNKILNDKFAISKWIDKHKKTKK
>gid:462  HP0447  conserved hypothetical protein
MSLANDLLEILSSQSPNDKRIRVLLEYISVLERTPWDLESLLRDYNFVFS
NTTGQHNQALERKETPYFDSVIVDEAAKANPLELLMVMALAKERIILVGD
DRQLPHYLDDEIGKKLEDESQDAQDEIEKALKDSMFKKLKERAQKLKELD
GKECFITLNMQYGMHPLLGELVSDVFYKPHNESFESPLKGKHLEEKPFKH
NLRVLDNKPLAWIDVKESKEKRNADGSYYRESEITAIKECLDLFMKDEPD
FTFGVITFFSEQKRLLEQALKGYANLEIGTVDSFQGKEFDVVFLSSVRTR
HTEGFGFLKISSCLCVALSRQKRALIVAGDREKFDTPESKDKVSGLFEFL
QSCKKEGKIL
>gid:464  HP0449  H. pylori predicted coding region HP0449
MEFFADSSFKAESLYYPKENNKSLNVNEIIIRKTIETSIKYHKQDTLRHA
KVVSWHVLGEVYYLHAKAFDDSKEIRVECKNHPIEKMAEKLEETNPEWFE
KWREKQYTQTGESKPSKRIKVFKNFTAFDDRLYTIECNLKNLDTHQKKFE
ICGALYDIYEQIFDETPSLKGRDLETYKAQDLSKKFMHLGFEQISKDLND
SRLNALLCYEEKVMQALAKKYPSFLQDLHDIKKYRNKDKHGEKPQDGSSL
TRVELERYRDGIYFLVENLLKNPLIKERENAQEEKHYKKNAEIDDRSQLS
NLNAPKPLFECFVGVNLAKAKYYSKKEEREKEKMILNFCKIFEIILFEAI
QKQPKPDFKNKDELLGDYPNLKNLDSLREVREDFLKRAFKNDEASLGAYV
LVLLSCKYFESVFEKVQEWLDFIARLIALRGHVHKITKELERLEEEDLEK
LEKQALEYFNKIANKIYLKEKR
>gid:466  HP0451  H. pylori predicted coding region HP0451
MILETISKQLQEQQESLNKDYRKKLESIKERSDRLESDLKTQFDAQLEKW
EQNFKGYEQQLTDILNEREQLDLDQQRLNAQKQALENHMKQREE
>gid:493  HP0478  adenine specific DNA methyltransferase (VSPIM)
MPSNALLIEEITHLINVSHSSVHNWIKTNLLEKLEIDHKIYVKTSSFLDF
CRNHLGKNKLNKYANKSLKGVHNHQELILKYLEILENSSDLEKLGSYYEE
ELSNATRNLEGIYYTPNRIVEQLFTLPKDFDVSQAIFCDPAVGSGNFIMH
ALKLGFKVENIYGYDTDAFAVALTKKRIKERYHLDCLNIVQKDFLNLKHT
PQFDCIFTNPPWGKKYNQNQKENFKQQFNLSQSLDSASLFFIASLNCLKE
NAHLGLLLPESCLNIDAFKKMREMALKFHIRSLIDFDKPFKNLMTKAVGL
ALKKTPNKDQKISCFYQNSKFKRSPSSFFNNPKKIFNIHCSSKENKILDH
LFSLPHMTLKNNAHFALGIVTGNNKEKLHPKQEKNTIPIFRGSDILKDGL
KAPSQFINAGLKDCQQVAPLSLYQAREKIVYKFISSKLVFFYDNKQRLFL
NSANMFVLKENFPINAHALKELLNSDLMQFIFESLFKTHKILRKDLECLP
LFVQFINDNFDEKFYLKNLGIEKKDPKHFTIRKNHACCLSFGFRG
>gid:496  HP0481  adenine specific DNA methyltransferase (MFOKI)
MHANLFNQNASKKDVFLHNLRSNNGRYKRYIKAPLRYGGGKSLAVGLIVE
CIPNGVRRMISPFIGGGSVEIACAAELGLEVLGFDIFDILVNFYQVLLKD
KQALYNHLLSLEPTRETYNIIKQELKAHYKKECTLDPLILARDYYFNFNL
SYGPGFLGWMSKIYTDKQRYLNALLKIKGFNAPSLKVECSSFEEVLLAYP
NDFFYLAPLMC
>gid:503  HP0489  H. pylori predicted coding region HP0489
MINYPNLPNSALEITEQPEVKEITNELLKQLQNALNSNSLFSEQVELSLK
GIVRILEVLLSLDFFKNANEIDSSLRNSIEWLNNAGESLKTKMKEYEGFF
SDFNTSMRTNEQEVSATLNANTENIKSEIKKLENQLIETTTRLLTSYQIF
LNNARDSANNQITANKTESLEALNQAKTSANNEITANQTQALTNINEAKE
NANNQITENKTQAITNINEARESATTQITTNKQEVLNSITQEKNQATSEI
TEAKKSAFNELLETLKPKFSGLFAGAYYIRNVIIFKADGRRKSRI
>gid:514  HP0500  DNA polymerase III beta-subunit (dnaN)
MKISVSKNDLENALRYLQAFLDKKDASSIASHIHLEVIKEKLFLKASDSD
IGLKSYIFTQSSDKEGVGTINGKKFLDIISCLKDSNIILETKDDSLAIKQ
NKSSFKLPMFDADEFPEFPVIDPKVSIEVNAPFLVDAFKKIAPVIEQTSH
KRELAGILMQFDQKHQTLSVVGTDTKRLSYTQLEKISIHSTEEDISCILP
KRALLEILKLFYENFSFKSDGMLAVIENEMHTFFTKLIDGNYPDYQKILP
KEYISSFTLGKEEFKESIKLCSSLSSTIKLTLEKNNALFESLDSEHSETA
KTSVEIEKGLDIEKAFHLGVNAKFFLEALNALGTTQFVLRCNEPSSPFLI
QESLDEKQSHLNAKISTLMMPITL
>gid:515  HP0501  DNA gyrase, sub B (gyrB)
MQNYQSHSIKVLKGLEGVRKRPGMYIGDTNVGGLHHMVYEVVDNAVDESM
AGFCDTINITLTDEGSCIVEDNGRGIPVDIHPTEKIPACTVVLTILHAGG
KFDNDTYKVSGGLHGVGVSVVNALSKRLIMTIKKEGQIYRQEFEKGIPTS
ELEIIGKTKSAKESGTTIEFFPDESVMEVVEFQAGILQKRFKEMAYLNDG
LKISFKEEKTQLQETYFYEDGLKQFVKDSAKKELLTPIISFKSMDEETRT
SIEVALAYADDYNENTLSFVNNIKTSEGGTHEAGFKMGLSKAILQYIGNN
IKTKESRPISEDIKEGLIAVVSLKMSEPLFEGQTKSKLGSSYARALVSKL
VYDKIHQFLEENPNEAKIIANKALLAAKAREASKKARELTRKKDNLSVGT
LPGKLADCQSKDPLESEIFLVEGDSAGGSAKQGRDRVFQAILPLKGKILN
VEKSHLSKILKSEEIKNMITAFGCGIQESFDIERLRYHKIIIMTDADVDG
SHIQTLLMTFFYRYLRPLIEQGHVYIAQAPLYKYKKGKTEIYLKDSVALD
HFLIEHGINSVDIEGIGKNDLMNLLKVARHYRYALLELEKRYNLLEILRF
LIETKDALSLDMKVLEKSILEKLEGLNYQILRSFATEESLHLHTQTPKGL
VEFNLDDNLFKEVLFEEANYTYQKLMEYNLDFLENKDILAFLEEVENHAK
KGANIQRYKGLGEMNPNDLWETTMHKENRSLIKLKIEDLEKTDAVFSLCM
GDEVEPRRAFIQAHAKDVKQLDV
>gid:521  HP0507  conserved hypothetical protein
MSYFKNAFNQKSLIDDSSVYLEPCSSSNFIELKRMHYNEENTKKTWDIIK
SLDSVAVLLYEKESDCFVIVKQFRPAIYARRFHFKCDQDQTIDGYTYELC
AGLVDKANKSLEEIACEEALEECGYQISPKNLETIGQFYSATGLSGSLQT
LYYAEVHKNLKVSKGGGIDTERIEVLFLERSKALDFIMDFQYAKTTGLSL
AILWHLKKFKNV
>gid:554  HP0541  cag pathogenicity island protein (cag20)
MAGTQAIYESSSAGFLSEISSIISSTSGVAGPFAGIVAGAMSAAIIPIVV
GFTNPQMTAIMTQYNQSIAEAVSMPMKAANQQYNQLYQGFNDQSMAVGNN
ILNISKLTGEFNVQGNTQGAQISAVNSQIASILASNTTPKNPSAIEAYAT
NQIAVPSVPTTVEMMSGILGNITSAAPKYALALQEQLRSQASNSSMNDTA
DSLDSCTALGALVGSSKVFFSCMQISMTPMSVSMPTVYAKYQALXTNALT
SGTNPMTTPACPIGDKVLAVYCYAEKVAEILREYYIEFVKNNTNLLQNAS
QMILNQSGLATSTYDTQAISNISSLYNYNIVANKSFLKSHLTYLDYIKNK
LKGQKDSYLTERVQTKIIVK
>gid:597  HP0585  endonuclease III (nth)
MKMGLKRAKTHQKAQQIKELLLKHYPNQTTELRHKNPYELLVATILSAQC
TDARVNQITPKLFEKYPSVNDLALASLEEVKEIIKSVSYFNNKSKHLISM
AQKVVRDFKGVIPSTQKELMSLDGVGQKTANVVLSVCFDANCIAVDTHVF
RATHRLGLSNAKDPIKTEEELSDLFKDNLSKLHHALILFGRYTCKAKNPL
CGACFLKEFCVSKASFKA
>gid:605  HP0593  adenine specific DNA methyltransferase (mod)
MLLKNFPQTIKDGQVSLSAIKMLLGFNESMNDISGYELTWTGKGFANALY
SEPCQKQLKLQESFTPQTSASKHPNNAIIIGDNLDALKLLKSAYSEKIKM
IYIDPPYNTGNDEFIYPDNFRQDYQKILREVGLMEIDENGKEIESESLKF
FKNTQGSGTHSGWLSFMLPRLKLARDLLKEDGVIFISIDDNECANLKILC
DEIFGEDNFVGDFIRKTKSTTNDAKIGLNYQHEFLLCYAKDKNYTNLLGG
EKNLENYKNPDNDPNGAWINDNPSAKSGNMKTGYFGVTNPYTNKVDYPPV
GMFWRFSQNTIQKHIDEGRICFKKEHKDNERGFIYKRYLKDLKTTQKTFD
SLIFSDNCYMNQAATKELLNLGMGEYFTYPKGVEFMKKIILHSTTPNEGD
IILDFFAGSGTTVHAVMELNAEDKGNREFILVQIDEEIKEDESAYDFCKK
ELKSAKPVISDITIERVKRAAQKISQLSKDSGLDLGFKVYTLQDKVQIIN
DKEEITLFNRSDLTPFDKALNLALQCGKTLNQALEIIIKDKLYKCEDAYF
CIVCDEEAQEYLAKSKNEMIFLDGYEEIDLEAFLNLNASFKERLSVVY
>gid:614  HP0602  endonuclease III
MLDSFEILKALKSLDLLKNAPSWWWPNALKFEALLGAVLTQNTKFEAVLK
SLENLKNAFILENDDEINLKKIAYIEFSKLAECVRPSGFYNQKAKRLIDL
SKNILKDFQSFENFKQEVTREWLLNQKGVGKESADAILCYVCAKEVMVVD
KYSYLFLKKIGIEIEDYDELQHFFEKGVQENLNSALALYENTIPLAQLYA
RFHGKIVEFSKQKLELKL
>gid:627  HP0615  DNA ligase (lig)
MIKSQKEYLERIAYLNTLSHHYYNLDEPIVSDAIYDELYQELKAYEEKNP
NGIQANSPTQKVGATTTNSFNKNPHLMRMWSLDDVFNQSELQAWLQRILK
AYPSASFVCSPKLDGVSLNLLYQHGKLVKATTRGNGLEGELVSANAKHIA
NIPHAIAYNGEIEIRGEVIISKKDFDALNQERLNANEPLFANPRNAASGS
LRQLDSEITKKRKLQFIPWGVGKHSLNFLSFKECLDFIVSLGFSAIQYLS
LNKNHQEIEDNYHTLIREREGFFALLDGMVIVVNELNIQKELGYTQKSPK
FACAYKFPALEKHTKIVGVINQVGRSGAITPVALLEPVEIAGAMINRATL
HNYSEIEKKNIMLSDRVVVIRSGDVIPKIIKPLESYRDGSQHKIERPKVC
PICSHELLCEEIFTYCQNLNCPARLKESLIHFASKDALNIQGLGDKVIEQ
LFEEKLIFNALDLYALKLEDLMRLDKFKIKKAQNLLDAILKSKNPPLWRL
INALGIEHIGKGASKTLAKYGLNVLEKSEAEFLEMEGFGVEMARSLVNFY
ASNQEFIRSLFELLNPKNSDMAEEKQKSSSVFNNKTIVLTGTLSKPRQEY
AQMLENLGAKISSSVSAKTDFLIAGENPGSKLALAQKHGVSVLNEEELLK
RLKELD
>gid:632  HP0621  DNA mismatch repair protein (MutS)
MSDAPKRSLNPTLMMNNNNTPPKPLEESLDLKEFIALFKTFFAKERDTIA
LENDLKQTFTYLNEVDAIGLPTPKSVKESDLIIIKLTKLGTLHLDEIFEI
VKRLHYIVVLQNAFKTFTHLKFHERLNAIVLPPFFNDLIALFDDEGKIKQ
GANATLDALNESLNRLKKESVKIIHHYARSKELAPYLVDTQSHLKHGYEC
LLLKSGFSGAIKGVVLERSANGYFYLLPESAQKIAQKIAQIGNEIDCCIV
EMCQTLSHSLQKHLLFLKFLFKEFDFLDSLQARLNFAKAYNLEFVMPSFT
QKKMILENFSHPILKEPKPLNLKFEKSMLAVTGVNAGGKTMLLKSLLSAA
FLSKHLIPMKINAHHSIIPYFKEIHAIINDPQNSANNISTFAGRMKQFSA
LLSKENMLLGVDEIELGTDADEASSLYKTLLEKLLKQNNQIIITTHHKRL
SVLMAENKEVELLAALYDEEKERPTYTFLKGVIGKSYAFETALRYGVPHF
LIEKAKTFYGEDKEKLNVLIENSSALERELKQKNEHLENALKEQEYLKNA
WLLEMEKQKEIFHNKKLELEKSYQQALNILKSEVASKDTSSMHKEIHKAS
EILSKHKTNQEIPQIITNFQANEKARYKNESVLIVQILDKGYYWIETELG
MRLKAHGSLLKKIQKPPKNKFKPPKTTIPKPKEASLRLDLRGQRSEEALD
LLDAFLNDALLGGFEEVLICHGKGSGILEKFVKEFLKNHPKVVSFSDAPI
NLGGSGVKIVKL
>gid:661  HP0650  H. pylori predicted coding region HP0650
MERLLGETYTNTNLDKPQNKPLNKQVYEGIENCNLCKRHQNSKPVIGLFN
PTSKLTFITLTPMLDSQLNFLNNLKAAMLESIIQKVFNCPLKDCSILSLL
KCDSNSLNLEEEINACLFHLTWQLDNSASKVIVVFGEILPKRLLNLSKEE
SFGRIVSLKTKHFLSTHALEDMLKNPTLKKEALAHFKIALQFLNQS
>gid:672  HP0661  ribonuclease H (rnhA)
MQEIEIFCDGSSLGNPGPGGYAAILRYKDKEKTISGGEEFTTNNRMELRA
LNEALKILKRPCRITLYSDSQYVCQAINVWLANWQKKNFSKVKNVDLWKE
FLEVSKGHSIVAVWIKGHNGHAENERCDSLAKLEAQKRVKTTT
>gid:675  HP0664  H. pylori predicted coding region HP0664
MEKLPKKRVSKTKSQKLIHSLTTQKNRAFLKKISANEMLLELEKGAFKKN
EAYFISDEEDKNYVLVPDNVISLLAENARKAFEARLRAELERDIITQAPI
DFEDVREVSLQLLENLRQKDGNLPNINTLNFVKQIKKEHPNLFFNFDNMF
KQPPFNENNFENFDNSDEENF
>gid:686  HP0675  integrase/recombinase (xerC)
MKHPLEELKDPTENLLLWIGRFLRYKCTSLSNSQVKDQNKVFECLNELNQ
ACSSSQLEKVCKKARNAGLLGINTYALPLLKFHEYFSKARLITERLAFNS
LKNIDEVMLAEFLSVYTGGLSLATKKNYRIALLGLFSYIDKQNQDENEKS
YIYNITLKNISGVNQSAGNKLPTHLNNEELEKFLESIDKIEMSAKVRARN
RLLIKIIVFTGMRSNEALQLKIKDFTLENGCYTILIKGKGDKYRAVMLKA
FHIESLLKEWLIERELYPVKNDLLFCNQKGSALTQAYLYKQVERIINFAG
LRREKNGAHMLRHSFATLLYQKRHDLILVQEALGHASLNTSRIYTHFDKQ
RLEEAASIWEEN
>gid:687  HP0676  methylated-DNA--protein-cysteine methyltransferase (dat1)
MVLYHYYFKTPKSFPLEYLHLCANESHLLRLDFDAANFSHNTPMNTPLKL
SVQALERYFLGQLFEFNTPLDLIGTFFQKQVWSALMTIPYGKTKSYDEIA
KLINNPRSCRAVGNANRNNPISLIVPCHRVVRKNGTLGGYNGGIEVKKWL
LEFESKILNQQAKNSLIS
>gid:698  HP0688  H. pylori predicted coding region HP0688
MLCVFDIETIPNISLCKEHFQLEENDALKICEWSFEKQKEKSGSEFLPLY
LHEIISIAAVIGDDYGQFIKVGNFGQKHENKEDFTSEKELLEDFFKYFNE
KQPRLISFNGRGFDMPLLTLKALKYNLTLDAFYNQENKWENYRARYSEQF
HLDLMDSLSHYGSVRG
>gid:699  HP0689  H. pylori predicted coding region HP0689
MMNIPGKFDVSGDLVHAIYYNPHLSQKEKKGVIDSYCQSDVLNTYWLFLK
YEVLKGALNKEQYLGLLNDFLAKFPKEKSYSSVFTNALEKEIREFA
>gid:711  HP0701  DNA gyrase, sub A (gyrA)
MQDNSVNETKNIVEVGIDSSIEESYLAYSMSVIIGRALPDARDGLKPVHR
RILYAMHELGLTSKVAYKKSARIVGDVIGKYHPHGDNAVYDALVRMAQDF
SMRLELVDGQGNFGSIDGDNAAAMRYTEARMTKASEEILRDIDKDTIDFV
PNYDDTLKEPDILPSRLPNLLVNGANGIAVGMATSIPPHRMDEIIDALVH
VLENPNAGLDEILEFVKGPDFPTGGIIYGKAGIIEAYKTGRGRVKVRAKV
HVEKTKNKEIIVLDEMPFQTNKAKLVEQISDLAREKQIEGISEVRDESDR
EGIRVVIELKRDAMSEIVLNHLYKLTTMETTFSIILLAIYNKEPKIFTLL
ELLHLFLNHRKTIIIRRTIFELEKAKARAHILEGYLIALDNIDEIVRLIK
TSQSPEAAKNALMERFTLSEIQSKAILEMRLQRLTGLERDKIKEEYQNLL
ELIDDLNGILKSEDRLNGVVKTELLEVKEQFSSPRRTEIQESYENIDIED
LIANEPMVVSMSYKGYVKRVDLKAYEKQNRGGKGKLSGSTYEDDFIENFF
VANTHDILLFITNKGQLYHLKVYKIPEASRIAMGKAIVNLISLAPDEKIM
ATLSTKDFSDERSLAFFTKNGVVKRTNLSEFESNRSCGIRAIVLDEGDEL
VSAKVVDKNAKHLLIASHLGIFIKFPLEEVREIGRTTRGVIGIKLNENDF
VVGAVVISDDGNKLLSVSENGLGKQTLAEAYRGQSRGGKGVIGMKLTQKT
GNLVGVISVDDENLDLMILTASAKMIRVSIKDIRETGRNASGVKLINTAD
KVMYVNSCPKEEEPENLETSSAQNLFE
>gid:715  HP0705  excinuclease ABC subunit A (uvrA)
MDKIIIQGARENNLKNIFLEIPKNQFVVFTGLSGSGKSTLAFDTLYAEGQ
RRYLESLSSYARQFLDKVGKPNVDKIEGLTPAIAIDQKTTSKNPRSTVGT
ITEIYDYLRLLFARVGEQFCPTCLEPISSMSTSDIISQICHLEENSKIII
LAPIIKDKKGSFNDKLESLRLKGYVRAFVDGVMVRLDEEIHLHKTKKHTI
EAVVDRVVVNNENASRIASAIEKALKESYGELEVEILQDNAPSIRKHYSE
HKACFKCKMSFEELEPLSFSFNSPKGACESCLGLGTKFSLDISKILDPNT
PLNQGAIKVIFGYNRSYYAQMFEGFCEYNGIDSALCFNELNKEQQDALLY
GNGTEISFHFKNSPLKRPWKGIIQIAYDMFKEQKDLSDYMSEKTCSSCEG
HRLKASSLSVQVAGLKMADFLTKPIEEVYHFFNDPTHFSYLNEQEKKIAE
PILKEILERVFFLYDVGLGYLTLGRDARTISGGESQRIRIASQIGSGLTG
VLYVLDEPSIGLHEKDTLKLINTLRNLQKKGNTLIVVEHDKETIKHADFV
VDIGPKAGRHGGEVVFSGSVKELLQNNHSTALYLNGTKKIERPKFELPKE
KHFLEIKNVNINNIKNLSVQIPLKQLVCITGVSGSGKSSLILQTLLPTAQ
TLLNHAKKTQSLNGVEIVGLEHLDKVIYLDQAPIGKTPRSNPATYTGVMD
EIRILFAEQKEAKILGYSASRFSFNVKGGRCEKCQGDGDIKIEMHFLPDV
LVQCDSCKGAKYNPQTLEIKVKGKSIADVLNMSVEEAYEFFAKFPKIAVK
LKTLMDVGLGYITLGQNATTLSGGEAQRIKLAKELSKKDTGKTLYILDEP
TTGLHFEDVNHLLQVLHSLVALGNSMLVIEHNLDIIKNADYIIDMGPDGG
DKGGKVIASGTPLEVAQNCEKTQSYTGKFLALELK
>gid:726  HP0717  DNA polymerase III gamma and tau subunits (dnaX)
MQVLALKYRPKHFSELVGQESVAKTLSLALDNQRLANAYLFSGLRGSGKT
SSSRIFARALMCEEGPKAVPCDTCIQCQSALNNHHIDIIEMDGASNRGID
DVRNLIEQTRYKPSFGRYKIFIIDEVHMFTTEAFNALLKTLEEPPSHVKF
LLATTDALKLPATILSRTQHFRFKKIPENSVISHLKTILEKEQVSYETSA
LEKLAHSGQGSLRDTITLLEQAINYCDNAITESKVAEMLGAIDRSVLEDF
FQSLINQDEARLKERYAILENYETESVLEEMMLFLKAKLLSPDFYSILLI
ERFFKIIMSSLSLLKEGANASFVLLLLKMKFKEALKFKALDDAILELEQT
PFNQNPSISYNAPKQESKNIEKREKIEQIERIEGTEKREKLEKKENAETP
QTPMLSAKDRIFHNLFKQVQTLVYERNYELGAVFEKNIRFIDFDSQTKTL
TWESLATDKDKELLRERFKIVKSIVDGVFGKGESIKIALKNHSENKSTLE
VVKELKFPYSKPKPTTETTAETKEKETKEKEIQENDTKEIQEVQPKQAPT
ALQEFMANHSELIEEIKSEFEIKSVELL
>gid:739  HP0732  H. pylori predicted coding region HP0732
MESYGLACSDRRIIAGLVGIASSIWKFFSSRYQRSQQRKEVDKNLHQICE
KIVQDVKSRLESRKKDIWEKIEKLKANLRPVDNYKRMKRQLKEAHERLRY
ISHSIHLIISKQGACNEE
>gid:817  HP0810  conserved hypothetical protein
MPNHQPVKKFKIIGGACKGLGLNLPNISSTRPTKAIVRESFFNTLQAEIN
GAHFIEVFSGSASMGLEALSRGAKSAVFFEQNKSAYKTLLENISLFKNRL
KKEMEIQTFLDDAFKLLPTLCLKNGVLNIIYLDPPFETSGFLGIYEKCFQ
ALERLLKRFNPKNLLVVFEHESMHEMPKSLVTLAIIKQKKFGKTTLTYFQ
>gid:828  HP0821  excinuclease ABC subunit C (uvrC)
MADLLSSLKNLPNSSGVYQYFDKNRQLLYIGKAKNLKKRIKSYFSIRNNE
ITPNHRASLRIQMMVKQIAFLETILVENEQDALILENSLIKQLKPKYNIL
LRDDKTYPYIYMDFSTDFPIPLITRKILKQPGVKYFGPFTSGAKDILDSL
YELLPLVQKKNCIKDKKACIFYQIERCKAPCENKITKEEYLKIAKECLEM
IENKDRLIKELELKMERLSNNLRFEEALIYRDRIAKIQKIAPFTCMDLAK
LYDLDIFAFYGASNKAVLVKMFMRGGKIISSAFEKIHSLNGFDTDEAMKQ
AIINHYQSHLPLMPEQILLNACSNETLKELQEFISHQYSKKIALSIPKKG
DKLALIEIAMKNAQEIFSQEKTSNEDLILEEARSLFKLECMPYRVEIFDT
SHHSSSQCVGGMVVYENNAFQKNSYRRYHLKGSDEYTQMSELLTRRALDF
AKEPPPNLWVIDGGRAQLNIALEILKSSGSFVEVIAISKEKRDSKAYRSK
GGAKDIIHTPSDTFKLLPSDKRLQWVQKLRDESHRYAINFHRSTKLKNMK
QIALLKEKGIGEASVKKLLDYFGSFEAIEKASEQEKNAVLKKRI
>gid:830  HP0823  conserved hypothetical protein
MRFLNNKHREKGLKAEEEACGFLKSLGFEMVERNFFSQFGEIDIIALKKG
VLHFIEVKSGENFDPIYAITPSKLKKMIKTIRCYLSQKDPNSDFCIDALI
VKNGKFELLENITF
>gid:842  HP0835  histone-like DNA-binding protein HU (hup)
MNKAEFIDLVKEAGKYNSKREAEEAISAFTLAVETALSKGESVELIGFGK
FETAEQKGKEGKVPGSDKTYKTEDKRVPKFKPGKTLKQKVEEGK
>gid:876  HP0868  H. pylori predicted coding region HP0868
MQEELNAYQQEIEDTREVLKKIRLELKQVQEILRKKKSALKGLKQEIYQK
KLEKENSRLNKETQNTQEDVIFPKALEEVEIYTKDNQVIVAKPSKRVFDE
GIYLQYRSVLRENRLLKNHLSKKDFENSLLKIELRDLHKEIKLYQAQNLL
KDK
>gid:885  HP0877  Holliday junction endodeoxyribonuclease (ruvC)
MRILGIDPGSRKCGYAIISHASNKLSLITAGFINITTTRLQEQILDLIEA
LDCLLDRYEVNEVAIEDIFFGYNPKSVIKLAQFRGALSLKILERIGNFSE
YTPLQVKKALTGNGKAAKEQVAFMVKRLLNITSEIKPLDISDAIAVAITH
AQRLKLH
>gid:890  HP0883  Holliday junction DNA helicase (ruvA)
MIVGLIGVVEKISALEVHIEVQGVVYGVQVSMRTAALLEAGQKARLKILQ
VIKEDAHLLYGFLEEGEKILFERLLKINGVGGRIALAILSSFSPNEFESI
IATKEVKRLQQVPGIGKKLADKIMVDLIGFFIQDENRPARNEVFLALESL
GFKSAEINQVLKTLKPNLSIEAAIKEALQQLRS
>gid:900  HP0893  H. pylori predicted coding region HP0893
MPNTTNKDYTKYSQRQLFSFLNSIKTKQKRALEKLKEIQAQKQRIKKALQ
FKALNLTENGYTIEEEREILARAKDTKNRLCFKSIEDFKKHCENL
>gid:902  HP0895  H. pylori predicted coding region HP0895
MPNTTAKKDYTKYSKKQLFNLIHQLERKIKKMQNDRISFKEKMAKELEKR
DQNFKDKIDALNELLQKISQAFDDKRDCCLGHEIPNIETQQAMRDVGNKE
TDLIVEDFSSYSNERKRALGVEAQS
>gid:918  HP0911  rep helicase, single-stranded DNA-dependent ATPase (rep)
MLETLQLNPEQLKAAKALQGHNLIIASAGTGKTSTIVGRILYLLDNGIKP
EEILLLTFTNKASNEMIARVAKYFKSSSKIEAGTFHAVAYRYLKEHYPNL
SLKQPKELRKLLESIVDTKNAIDDDKKPYTSQHLYALYSLYTNALKQEDF
SAWLSNKNPEHTPYAALYENILEEFENTKKKHNYIDYNDLLLLFKKAMLE
RPSPYKEVLCDEFQDTNPLQESILDAINPPSLFCVGDYDQSIYAFNGADI
SIISNFTQKYKNAQVFTLTKNYRSSKEILDLANQVIQHNERIYPKNLEVV
KSGKFNKPTLLNYNDNIAQCQDIAKRIVMRKDFKEVAVIFRNNASADQLE
AALRSYNVPSKRKGSASFFESKEVALALDICVLIFNPKDIMAAIHILSYI
SDIGSNTAKDIHEALMLLGNGDLKLALIQPNKEAKIYTKKKEITSMGLFE
EIFALENSSRFNSVIDKAFHSHPVLMHPKISLNGAKTLSDFFTLYTKAPT
HSPSALIKHILESAFFQTFKTRLLKERSKNKDGSYNEFKKLQAQKRFNEK
MDLLSSLAKNYQNLGRFLNGTLIGSNEATQGCGVNLLSVHASKGLEFKDV
YIIDLMEGRFPNHKLMNTGGGIEEERRLFYVAITRAKENLWLSYAKNELR
ENAKPKEHKPSVFLYEAGLLKPDSK
>gid:932  HP0925  recombinational DNA repair protein (recR)
MNTYKNSLNHFLNLVDCLEKIPNVGKKSAFKMAYHLGLENPYLALKITHA
LENALENLKTCSSCNALSESEVCEICSDESRQNSQLCMVLHPRDVFILED
LKDFLGRYYVLNSIEEVDFNALEKRLIEENIKEIIFAFPPTLANDSLMLY
IEDKLQHFHLTFTKIAQGVPTGVNFENIDSVSLSRAFNSRIKA
>gid:975  HP0964  H. pylori predicted coding region HP0964
MLQCMAEFNQRLPPDAFNSVDKSEESLLFLSNMGAIKERLEKAASRKEEI
ISQRLQDYAQSQANNLHNLIAQLFQDLEDEKKRVKNADMGAIKKQIEAYE
KLSGNIEIGFREAYEEFIFHFIKNTRDGLNETLTKAIQKASALAREEEEE
ERYTERVKQGGLFGSFKRNFLWWADDDAGYDEVSRTRATIKAGAVLDYLT
EMHERCENALNDSADSFKVVFRKELYAKVFSQLREIISDDLIDEVAFQKS
VMAVLDSIEFKEFDYTDKLPSEIRGKTGFLKGDEADAFIQSVGNYVRNFE
SEAKKDVKGYIQGLREALERQNFASDTLQKLKENMQNLQNQVQNKEQSIA
QLDAQIQALKGIQ
>gid:984  HP0973  H. pylori predicted coding region HP0973
MKHLTPLTHTIFKALWLGTALSASLSLAATESPTKTEPKPAKGVKNKPKS
PVTKVMMTNCDNIKDFNAKQKEVLKAAYQFGSKENLGYEMAGIAWKESCA
GVYKINFSDPSAGVYHSYIPSVLKSYGHNDSPFLRNVMGELLIKDDAFAS
EVALKELLYWKTRYHDNLKDMIKSYNKGSRWERSEKSNADAEKYYEEIQD
RIRRLKESKIFDSQSSNDQELQKSANSNLDLDPIGNAMPQALIAKETKIE
ETQAEKSQEMKETTSEQTKSKPEKAKDKPMYLAQINSTDFTPVKKSPKKP
AKVSQKHSFKNNIKNNVKNNAKTASKKQEMCKNCSPGQRNAILANHITLM
QEL
>gid:992  HP0981  exonuclease VII-like protein (xseA)
MKKIKPIKQMIATCKKTLFKSYGYYLARTFSMSAIGHESDFLLSDLVADL
RASTPSNAMEILLPNSDEWLQKLDGFNVKLHRSFKILLHQKKAHLEHLAD
FLEKRNYPVNHSEPGSQALHR
>gid:1000  HP0988  IS605 transposase (tnpA)
MRKNHYPLRGYISTNRSKHNLKAHLILVCKYRKKLLQGDLNNFIKSVIDE
IATQSNFIIIAMESDIDHLHLMVQYIPRMSISSIISRIKQITTYRVWRDK
RFIPLLQKHFWKEKTFWTDGFFVCSIGEANPETIKAYIENQG
>gid:1001  HP0989  IS605 transposase (tnpB)
MLNAIKFRIYPNAQQKELISKHFGCSRVVYNYFLDYRQKQYAKGIKETYF
TMQKVLTQIKRQEKYHYLNECNSQSLQMALRQLVSAYDNFFSKRARYPKF
KSKKNAKQSFAIPQNIETKTETQTIALPKFKEGIKAKLHRDLPKDSVIKQ
AFISCIADQYFCSLSYETKEPIPKPTIIKKAVGLDMGLRTLIVTSDKIGY
PHIRFYQKLEKKLTKAQRRLSKKVKDSNNRKKQAKKVSRLHLACSNTRDD
YLHKISNEITNQYDLIGVETLNVKALMRTYHSKSLANASWGKFLTMLEYK
AQRKGKTLLSIDRFFPSSQLCSYCGVNTGKKHESITKFTCPHCKTTHHRD
YNASVNIRNYALGMLDDRHKVKTDKARVGIIRSDYTHHTNECVKACGASS
NGVSSKYGNILDLASYGAMKQEKAQSL
>gid:1007  HP0995  integrase/recombinase (xerD)
MPHNKLTKSQRELFCNLKAFLYTKAKNFTPIQDVKDMALILDTQDKILKC
HNIEQLKQLCHILYNQGIKHTIMMQGLFLFFNYFKDNLKLRSFRMLSEEQ
VINFLFELAQNRKPSSMAKYVMYLRQFFDYLDRKRRYSFDFTLKNLAFAK
TKESLPRHLNDKDLKSFLKTLLDYKPATSFEKRNKCILLIVILGGLRKCE
VLNIELKHIQVEEQNYSILIQGKGRKERKAYIKKSLLEPSLNAWLSDEYR
LKYFNGAYLFKKDKQKAQNSLTLYSFIPLIFKLAQIKHYKQYGTGLHLFR
HSFATLIYQETQDLVLTSRALGHSSLLSTKIYIHTTQEHNKKVALVFDSL
IEDKK
>gid:1009  HP0997  IS605 transposase (tnpB)
MLNAIKFRIYPNAQQKELISKHFGCSRVVYNYFLDYRQKQYAKGIKETYF
TMQKVLTQIKRQEKYHYLNECNSQSLQMALRQLVSAYDNFFSKRARYPKF
KSKKNAKQSFAIPQNIETKTETQTIALPKFKEGIKAKLHRDLPKDSVIKQ
AFISCIADQYFCSLSYETKEPIPKPTIIKKAVGLDMGLRTLIVTSDKIGY
PHIRFYQKLEKKLTKAQRRLSKKVKDSNNRKKQAKKVSRLHLACSNTRDD
YLHKISNEITNQYDLIGVETLNVKALMRTYHSKSLANASWGKFLTMLEYK
AQRKGKTLLSIDRFFPSSQLCSYCGVNTGKKHESITKFTCPHCQTTHHRD
YNASVNIRNYALGMLDDRHKVKTDKARVGIIRSDYTHHTNECVKACGASS
NGVSSKYGNILDLASYGAMKQEKAQSL
>gid:1010  HP0998  IS605 transposase (tnpA)
MRKNHYPLRGYISTNRSKHNLKAHLILVCKYRKKLLQGDLNNFIKSVIDE
IATQSNFIIIAMESDIDHLHLMVQYIPRMSISSIISRIKQITTYRVWRDK
RFIPLLQKHFWKEKTFWTDGFFVCSIGEANPETIKAYIENQG
>gid:1019  HP1008  IS200 insertion sequence from SARA17
MKKIDDMRHGRHCVFLMHVHFVFVTKYRRSAFNKEVIDFLGSVFAKVCKD
FESELVEFDGESDHVHLLINYPPKVSVSKLVNSLKGVSSRLTRQHHFKSV
EASLWGKHLWSPSYFAGSCGDAPLEMIKQYIQDQETPH
>gid:1020  HP1009  site-specific recombinase
MYCFYSLTISASHLKVKRLRLLNEEMLVNFLFELAKQRKINSMAKYVMYI
RQFFDYLDRTKHYEFYFSLKNIAFAKHKDNLPKHLNSKDLKSFIYTLINY
RTRSSYEKRNKCILLLIILGGLRKSEVFNLELRNIVLEKEHYILLIKGKN
NKERKAFIKIAQTDIDTLAPLIRILLESIAKNLLSH
>gid:1034  HP1022  H. pylori predicted coding region HP1022
MHSRTLLLDIDCVIPNIVRRLLSNKTLPKRFAAYSLQEVGVIFLTTQILS
IMHKTRCSKTLFFITRGRESFRYQLCDHYKQKRHQFDEDFKALLRTLKIA
IVEKYPLKKGAKIQGEHCFEYEADDIISFYKKKDPNNYVIASMDKDILYS
NRGSHFNLKTNAFFNVSQKEAHFFAYYQCVVGDKGDNIKGVKGIGGFNYK
DFLNEDAKEHELWEQIIQAFKIKEDLSDSEAKEKALLNMRLVNMHQMTHH
GVIKLWEPEFKKTFFPKKPQRPDFKRIS
>gid:1038  HP1026  conserved hypothetical helicase-like protein
MSLTSLLNPKSLEDFLGQEHLVGKDAPLFKALQSKHFPHAFFYGPPGVGK
TSLAQIIAYMLERPILLFNATDFKLEDLRLKLKNYQNTLLKPVVFIDETH
RLNKTQQEFLLPIMEKDHALILGASTQDPNYSLSHAIRSRSFIFELTPLN
KSDLDRLCAKALTLLKKQIEPGAKTYLLNNSAGDARALLNLLDLSAKIED
PITLKTLQSLRPHSLNDGSYSDDTHYNLTSALIKSLRGSDENASIYYLAR
LIAGGENPEFIARRLVIFASEDIGNANPNALNLAASCLFAVKQIGYPEAR
IILSQCVIYLACSPKSNTAYRAINQALDCVQKGSLYPIPKHLLPNAKDYL
YPHDYNGYVKQDYLEKPLDLVSSQGIGFEKTLLEWLDKIRN
>gid:1071  HP1059  Holliday junction DNA helicase (ruvB)
MKERIVNLETLDFEISQEVSLRPSLWEDFIGQEKIKSNLQISICAAKKRQ
ESLDHMLFFGPPGLGKTSISHIIAKEMETNIKITAAPMIEKSGDLAAILT
NLQAKDILFIDEIHRLSPAIEEVLYPAMEDFRLDIIIGSGPAAQTIKIDL
PPFTLIGATTRAGMLSNPLRDRFGMSFRMQFYNPSELALIIKKAAVKLNQ
DIKQESADEIAKRSRGTPRIALRLLKRVRDFALVKNSSLMDLNITLHALN
ELGVNELGFDEADLAYLSLLANAQGKPVGLNTIAASMREDEGTIEDVIEP
FLLANGYLERTAKGRIATPKTHELLKIPTLNPQTLF
>gid:1094  HP1081  H. pylori predicted coding region HP1081
MLRVLSVGVAFILLGCQFFNKTTLHLKYKDYPKNSALKTAFTLTPPKIFF
NARFVPPFYQKEFKKAITQQIAYFLKDKSAFILNVSGNVFFSFEENPKDL
KAIKERLKKTIEPNADPKAVMRFLNLQASLILECVPQTTCPFDTLLIPTA
FSVPVYYANRLGDNPSLFSQEDKTYHNALIKALNKAYYSLMEGLEKRLNA
IKNAEWL
>gid:1102  HP1089  H. pylori predicted coding region HP1089
MNLEKLFLEKTPLFVFSSTRRLKHFYLEQGEGFLPNAMSMGNFFEQAFYI
PNKKKIPNSARLILMIDTIKAIAKEKKSILEGLLLFENSFLGYLESTSFL
FDLFDELSSACIKLNELSSKDIYLDYEKHLEVLEMIYDRYIKKLEGLGFY
DKIMQEKPAILKEFFEHFSSIEWHLDGFMSVFERQCLLEAAELVPITLHL
SCDKYNQKFLEFLNLKLETDCDYSIDFKTQKILSQTPKRQKIEPKLYANS
SYLKQSALVLQTIEEYLQKDNDPNKMAIITPNADFLPFLKLLDKNNNLNF
AMGLGAKNSPYYTELVKILEDLETSDLDLSGSALLDLENITLALLEQQSS
KEKAPLKEAHSQIMHQYHLLKDTLKNYSLKDLLHLYLQEFEANFRLDDSS
GGKIRVMDTLETRGMQFDKIVIVDFNETCVPSLKDCDLFLNSALRKSLNL
PTLLDKKNLQKHYYYQLFKNSKEITLSYIESETSKASNMLLELNLHIEPI
KDAYTLFAPSPLKDYQEEEIKAAIPKDFSFSASSLNAFLTCKRRFYYHYI
KRFKESPKDENNSAVGSLLHELLKEAYEKDKTPHALEERLIWLLETRENI
TPKERLDTLVVLKKIQAFYKKERERFNAEITILDLEKSFETIIQGVIFKG
RIDRIDKTADNEIILLDYKFKSDLKLDSMSKTQRGGLSPIEIAQISTDYQ
MAIYAFALKNLGYKEPIKAFFYDLRKGELLEEEELILQAKMDHLEFSLIP
KLKQEIDFEKTLEVKDCEYCSFKDMCNR
>gid:1108  HP1095  IS605 transposase (tnpB)
MLNAIKFRIYPNAQQKELISKHFGCSRVVYNYFLDYRQKQYAKGIKETYF
TMQKVLTQIKRQEKYHYLNECNSQSLQMALRQLVSAYDNFFSKRARYPKF
KSKKNAKQSFAIPQNIETKTETQTIALPKFKEGIKAKLHRDLPKDSVIKQ
AFISCIADQYFCSLSYETKEPIPKPTIIKKAVGLDMGLRTLIVTSDKIGY
PHIRFYQKLEKKLTKAQRRLSKKVKDSNNRKKQAKKVSRLHLACSNTRDD
YLHKISNEITNQYDLIGVETLNVKALMRTYHSKSLANASWGKFLTMLEYK
AQRKGKTLLSIDRFFPSSQLCSYCGVNTGKKHESITKFTCPHCQTTHHRD
YNASVNIRNYALGMLDDRHKVKTDKARVGIIRSDYTHHTNECVKACGASS
NGVSSKYGNILDLASYGAMKQEKAQSL
>gid:1109  HP1096  IS605 transposase (tnpA)
MRKNHYPLRGYISTNRSKHNLKAHLILVCKYRKKLLQGDLNNFIKSVIDE
IATQSNFIIIAMESDIDHLHLMVQYIPRMSISSIISRIKQITTYRVWRDK
RFIPLLQKHFWKEKTFWTDGFFVCSIGEANPETIKAYIENQG
>gid:1127  HP1114  excinuclease ABC subunit B (uvrB)
MPLFDLKSPYPPAGDQPQAIEALTKSLKNNNHYQTLVGVTGSGKTYTMAN
IIAQTNKPALIMSHNKTLCAQLYSEFKAFFPHNRVEYFISHFDYYQPESY
IPRRDLFIEKDSSINDDLERLRLSATTSLLGYDDVIVIASVSANYGLGNP
EEYLKVMEKIKVGEKRAYKSFLLKLVEMGYSRNEVVFDRGSFRATGECVD
IFPAYNDAEFIRIEFFGDEIERIAVFDALEKNEIKRLDSVMLYAASQFAV
GSERLNLAIKSIEDELALRLKFFKEQDKMLEYNRLKQRTEHDLEMISATG
VCKGIENYARHFTGKAPNETPFCLFDYLGIFEREFLVIVDESHVSLPQFG
GMYAGDMSRKSVLVEYGFRLPSALDNRPLKFDEFIHKNCQFLFVSATPNK
LELELSKKNVAEQIIRPTGLLDPKFEVRDSDKQVQDLFDEIKLVVARGER
VLITTLTKKMAEELCKYYAEWGLKARYMHSEIDAIERNHIIRSLRLKEFD
ILIGINLLREGLDLPEVSLVAIMDADKEGFLRSETSLIQTMGRAARNANG
KVLLYAKKITQSMQKAFEITSYRRAKQEEFNKIHNITPKTVTRALEEELK
LRDDEIRIAKALKKDKMPKSEREKIIKELDKKMRECTKNLDFEEAMRLRD
EIAQLRTL
>gid:1134  HP1121  cytosine specific DNA methyltransferase (BSP6IM)
MDFCSGIGGGRLGLEQCHLKCVGHAEINHEALRTYELFFKDTHNFGDLMR
INPNDLPDFDALISGFPCQAFSINGKRKGLEDERGTIIYGLIRILKVKQP
ECFLLENVKGLINHNKKATFNIIIKALQEVGYTTYYKILNSADFQLAQNR
ERLYIVGFRKDLKHPFNFPLGLANDYYFKDFLDADNECYLDVSNAAFQRY
LHNRYNHNRVSLEDLLTLENAVLDTRQSDLRLYSNVFPTLRTSRHGLFYT
QKGKIKRLNAIESLLLQGFPRDLIAKIKDNPNFKASHLLSQAGNAMSVNV
IAAIAKQMLKAI
>gid:1160  HP1146  H. pylori predicted coding region HP1146
MRTEPLFYFKKQGMFKSPCYTYGKIHILGESMEKTETTIFVDWENLLADL
KAIQETDERLKEPNFNFNNPEQLLVLIRSFLEPEEELKRIYFYVSEPFTE
VEPRIKGNKNEELEEYKEKNPKDYEERVNKSGIIQSFNHNIAQQNQVKLR
VGRVMFKFTNESEDKEVLI
>gid:1228  HP1208  ulcer associated adenine specific DNA methyltransferase
MNYIGSKYKLIPFIKENIHAVVGDNLSGTIFCDLFAGTGIVGRAFKKAVN
KVISNDLEYYSFVLNQNYIGNIQEIPNQEELINEINSVALKKGFIYSYYS
LGGSSRQYFSETNAQKIDAMRLKIEELKLSQNIDNCTYYFLLASLLESAD
KVANTASVYGAFLKRLKKSAQKELILKGADFDLSLNANEVYQQDASELIG
KISGDILYLDPPYNARQYGANYHLLNTIAIYTPFAPKGKTGLPSYQKSSF
CSRAKILNAFENLIKTARFKYIFLSYNNEGLMSETEIGNILKKYGTYSLM
TKTYMRFKADNKRTHKAAHTKECLHILIK
>gid:1250  HP1228  invasion protein (invA)
MLHKKYRPNVAAIIMSPDYPNACEVFIAERIDIEGAWQFPQGGIDEGETP
LEALHRELLEEIGTNEIEILAQYPRWIAYDFPSNMEHKFYSFDGQKQRYF
LVRLKHTNNIDLNKHTPEFRAYQFIHLKDLLKRIVPFKRQVYRQVIAYFK
REGYL
>gid:1253  HP1231  DNA polymerase III delta prime subunit (holB)
MKNSNRLIYTDNLEESLEETASLFEHHIKFYTEIIEKDKKVIKTFNKDFK
IEHAKEVISKAHLKHSELNAFLIAAPSYGIEAQNALLKILEEPPNNVCFI
MFAKSQNHVLATIKSRLIKEDKRQKIPLKPLDLDLSKLDLKDIYAFLKNL
DKENFDSRENQRERIESLLESVNRHKIPLNEQELQAFDLAIKANSSYYKL
SYNLLPLLLSLLSKKKTP
>gid:1267  HP1245  single-strand DNA-binding protein (ssb)
MFNKVIMVGRLTRNVELKYLPSGSAAATIGLATSRRFKKQDGTLGEEVCF
IDARLFGRTAEIANQYLSKGSSVLIEGRLTYESWMDQTGKKNSRHTITAD
SLQFMDKKSDNPQANAMQDSIMHENSNNAYPANHNAPSQDPFNQAYAQNA
YAKENLQAQPSKYQNSVPEINIDEEEIPF
>gid:1269  HP1247  H. pylori predicted coding region HP1247
MYRKDLDHYLKQRLPKAVFLYGEFDFFIHYYIQTISALFKCDNPDIETSL
FYASDYEKSQIATLLEQDSLFGGSSLVVLKLDFALHKKFKENDINLFLKA
LERPSHNRLIIGLYNAKSDTTKYKYTSDAIVKFFQKSPLKDEAICARFFI
PKTWESLKFLQERANFLHLDISGHLLNALFEINNEDLGVSFNDLDKLAVL
NAPITLEDIQELSSNAGDMDLQKLILGLFLKKSALDIYDYLLKEGKKDAD
ILRGLERYFYQLFLFFAHIKTTGLMDAKEVLGYAPPKEIAENYAKNALRL
KEAGYKRVFEIFRLWHIQSMQGQKELGFLYLTSIQKIINP
>gid:1344  HP1323  ribonuclease HII (rnhB)
MGCVSMTLGIDEAGRGCLAGSLFVAGVACNEKTALEFLKMGLKDSKKLSL
KKRFFLEYKIKTHGEVGFFVVKKSANEIDSLGLGACLKLAVQEILENGCS
LVDEIKIDGNTAFGLNKRYPHIQTIIKGDETIAQIAMASVLAKAFKDREM
LELHALFKEYGWDKNCGYGTKQHIEAIIKLGATPFHRHSFTLKNRILNPK
LLEVEQRLI
>gid:1368  HP1347  uracil-DNA glycosylase (ung)
MKLFDYAPLSLAWREFLQSEFKKPYFLEIEKRYLEALKIPKTIFPKSSNL
FYALNLTPPCAVKIILLGQDPYHSTYLENDQELPVAMGLSFSVEKNAPIP
PSLKNIFKELHANLGVPVPCCGDLSAWAKRGMLLLNAILSVEKNQAASHQ
YIGWEAFSDQILMRLFETTAPLIVVLLGKVAQKKIALIPKNKHIIITAPH
PSPLSRGFLGSGVFTSVQKAYREVYRKDFDFSL
>gid:1372  HP1351  H. pylori predicted coding region HP1351
MDYQTFNEIFNRFVFGTSKAKLLENIAENPERYLGIFRPTKPKTKLLQNL
LTSHEIKFGDAFEYLIEQYLKEHNFSPLSKKIPYYNKNKEKRESLELDQL
AKKDNTYYFIEQKMRDDHDSAKKRGQIDNFERKLEALIHRYGENIQGYFY
FIDESLNKNQNYYKEELQKLSVGYGVPLRLCYGKELFENLNILQVWDEVL
NHLARWREILPDLPSLNFDENPLESFREIKDLAPSVYRKLLDNDEIFNLV
LILFPEQKALKMLAEHFKRQNKTIYQQLASKLEEKLLSLR
>gid:1373  HP1352  adenine specific DNA methyltransferase (HINFIM)
MDFLKENLNTIIEGDCLEKLKDFPNRSVDFIFADPPYFMQTEGELKRFEG
TKFQGVEDYWDKFGSFKEYDAFCLGWLKECQRILKDNGSICVIGSFQNIF
RIGFHLQNLGFWILNDIIWHKSNPVPNFAGKRLCNAHETLIWCAKHKNSK
VAFNYKTMKYLNNDKQEKSVWQIPICMGNERLKDAQGKKVHSTQKPEALL
KKIILSATKPKDIILDPFFGTGTTGAVAKSMNRYFIGIEKDSFYIKEAAK
RLNNTRDKSDFITNLDLETKPPKIPMSLLISKQLLKIGDFLYSPNKEKIC
QVLENGQVRDNENYETSIHKMSAKYLNKTNHNGWKFFYAYYQNQFLLLDE
LRYICQKDS
>gid:1382  HP1362  replicative DNA helicase (dnaB)
MDHLKHLQQLQNIERIVLSGIVLANHKIEEVHSVLEPSDFYYPPNGLFFE
IALKLHEEDCPIDENFIRQKMPKDKQIKEEDLVAIFAASPIDNIEAYVEE
IKNASIKRKLFGLANTIREQALESAQKSSDILGAVEREVYALLNGSTIEG
FRNIKEVLESAMDLITENQRKGSLEVTGIPTGFVQLDNYTSGFNKGSLVI
IGARPSMGKTSLMMNMVLSALNDDRGVAVFSLEMSAEQLALRALSDLTSI
NMHDLESGRLDDDQWENLAKCFDHLSQKKLFFYDKSYVRIEQIRLQLRKL
KSQHKELGIAFIDYLQLMSGSKATKERHEQIAEISRELKTLARELEIPII
ALVQLNRSLENRDDKRPILSDIKDSGGIEQDADIVLFLYRGYIYQMRAED
NKIDKLKKEGKIEEAQELYLKVNEERRIHKQNGSIEEAEIIVAKNRNGAT
GTVYTRFNAPFTRYEDMPIDSHLEEGQETKVDYDIVTT
>gid:1387  HP1367  type IIS restriction enzyme M1 protein (mod)
MILNKIYIEDVFTFLDKLEDKSVDLAIIDPPYNLKIASWDSFKNDEEFLT
FSYAWIDKMLPKLKDTGSFYIFNTPFNCALFLAYLHHKKVHFLNFITWVK
KDGFANAKKRYNHAQESILFYSMHKKNYTFNADEIRIAYESAERIKHAQS
KGILKNNKRWFPNPKGKLCLDVWEITSQRHVEKEKGKILKPKHPSIKPKA
LIERMIKASSHKNDLILDLFSGSGMTSLVAKSLERNFIGCESHAEYVHGS
LEMFRYNECE
>gid:1388  HP1368  type IIS restriction enzyme M2 protein (mod)
MNINKVFYHSSTNMNEVPDNSVDLIITSPPYFNIKDYAKNGTQDLQHSAQ
HVEDLGALEKYEDYLLGLLKVWLECYRALKPNGKLCINVPLMPMLKKVLN
THYNRHIFDLHADIQHSILHDLNNMLKNKPKMFLLDVYIWKRANPTKRLM
FGSYPYPRNFYAQNTIEFIGVFVKDGKPKQPTEEQKEQSQLTQEEWVEFT
KQIWEIPIPNKNDIAFGKHAALMPAELARRLIRLYSCVGDVVLDPFSGSG
TTLREAKLLKRNFIGYELYENYKPLIEQKLGNLFDFE
>gid:1389  HP1370  type III restriction enzyme M protein (mod)
MYKLKDENGFYKLDPVWAKSGNNFSPYTFLNGKTWSPPSGTFWRYSIGTL
KDMEQNNRIVFNGKNPMAKRYLSEVAEGRKSSTFWDGSEVGYNLNGDAEI
KQLFNGNKVFNNPKPEALLQRILEISTKENDLVLDFFAGSGTTCAVAHKM
KRKYIGIEMGEHFESVILPRLKKVIGGFKSGAAKEFDGGGVIKVYELESY
EEILRKIKYEDNDKPLAYDEQYSDLVERKNESYTLNIEALEKMGVDIKET
LENLWGVGVEFFNEKVVKFKGNDKEVEILKALKEALIW
>gid:1406  HP1387  DNA polymerase III epsilon subunit (dnaQ)
MIKISLNSNKRAWMWWFQGVIFLNPKIVSWLLKAYRMSDNLLHKDIQALI
ARLKRQDLSLGMLEKSLSRLIHDEINLEYLKACGLNFIETSENLITLKNL
KTPLKDEVFSFIDLETTGSCPIKHEILEIGAVQVKGGEIINRFETLVKVK
SVPDYIAELTGITYEDTLNAPSAHEALQELRLFLGNSVFVAHNANFDYNF
LGRYFVEKLHCPLLNLKLCTLDLSKRAILSMRYSLSFLKELLGFGIEVSH
RAYADALASYKLFEICLLNLPSYIKTTMDLIDFSKCANTLIKRPPKARYQ
EIPSPFSLFEKTKGLFNHKSNQLNESCLMGFMGTEILASLFDTFECCLVF
>gid:1412  HP1393  DNA repair protein (recN)
MRDFNNAQITRLKVRQNAVFEKLDLEFKDGLSAISGASGVGKSVLIASLL
GAFGLKESNASNIEVELIAPFLDTEEYGIFREDEHEPLVISVIKKEKTRY
FLNQTSLSKNTLKALLKGLIKRLSNDRFSQNELNDILMLSLLDGYIQNEN
KAFSPLLGALEEKFTRLEKLEKERRLLEDKKRFQKDLEERLNFEKMKLER
LDLKEDEYERLLEQKKLLSSKEKLNDKIALALEVLENTHKITHALESVGH
SAEFLKSALLEASALLEKEQAKLEECERLDIEKVLERLGMLSGIIKDYGS
IMHAKERLGHVKNELHNLKEIDSHCETYHKEIERLKTECLKLCEEISGFR
KEYLAGFNALLSAKAKDLLLKSPSLVLEDAPMSEKGAQKLVLNLQNSQLE
TLSSGEYSRLRLAFMLLEMEFLKDFKGVLVLDEMDSNLSGEESLAVSKAL
ETLSSHSQIFAISHQVHIPALAKNHILVFKENHKSLAKTLNNEERVLEIA
RMIGGSENIESAISFAKEKLKAQE
>gid:1431  HP1410  H. pylori predicted coding region HP1410
MPKKELLKMSKKRIFKDFLKEAKQHRPIVFYTDNDCDGMLAGSVLMSMCY
RLGIKDFFFFSPLRNAHGYGFTDLALNDLLSQPCIFNPKTNQLVRLDCIK
NQFQKNPLLFSADLGADLAANTELQEILLEHFEQCIITDHHKSFEVDWID
ENKIAYINLNDEKDANYYSGAFTSALVFSQIFQTQTTPLEEELIAITLLS
DRIDLDHGDNLDMVLSLAQAKHERIKCFFKDKDLSLAQDDLDEISNLYGF
NCINYINALSRLSGAREFKGCYDSYLHYLVLKHFNPINXPRLSVFNVKEF
KXYNDXKKKMVKESEENAQIFPCNKILVALLDESCSTKVGVSGLVANNFL
KKYPSNRSLCIYRDNKDGYSGSARGGGNFLSQIKTIPFNTSWRA
>gid:1458  HP1438  conserved hypothetical lipoprotein
MFFKTYQKLLGASCLTLYLAGCGSDSSEPLVGIEKNSFNSTVKIISKTDN
IEIQDLKLNRGNCEHDQNFLVKLIQETANTYLFASEKEKAIKNHQAKIAR
LQKDLEELTQHVQQSNNLDKLLENGGLFVSGHDYKYTKDDNPIYVVKRML
DNLDSYKYESDDVLDVPYEKLLEISIAIEDTKNPKDYPYINLKELKKLID
SIIDDHGYMADGFLNEYSNRVSKKGLQILAKLKSMWPSVGKFYFASLKEA
IPRHAKEVTDKMISSEEKSIKANQVKLTEAKQDIDKMEKIIKDLESKKNT
LSVYLKFGESFTAHYKCQNLIEVGVKTDKGSWTFNFNR
>gid:1481  HP1460  DNA polymerase III alpha-subunit (dnaE)
MKENKAFTHLHLHTEYSLLDGANKIKILAKRVKELGMKSVSVTDHGNMFG
AIDFYTSMKKEGIKPIIGMEAYIHNDDNLSSKETKQRFHLCLFAKNQEGY
ENLMFLSSMAYLEGFYYFPRINKKLLKEHSKGIIASSACLQGEVNYHLNT
NNERNRKYGAKGYDEAKKIACEYQEIFEDDFYLEIMRHGILDQRFIDEQV
IKMSLETGLKIIATNDTHYTMPNDAKAQEVAMCVAMGKTLNDKGRLKHSV
HEFYIKSPEEMAKLFADIPEALENTQEIADKCVLEIDLKDDKKNPPTPPS
FKFTKAYAQNEGLNFEDDASYFAYKAREGLKERLVLVPKEKHDQYKERLE
KEIEVITNMKFPGYMLIVWDFIRYAKEMGIPVGPGRGSAAGSLVAFALKI
TDIDPLKYDLLFERFLNPERISMPDIDTDFCQRRRKEIIEYMIEKYGKYN
VAQVITFNKMLAKGVIRDVARVLDMPYKEADDFAKLIPNRLGITLKGYEK
NGEFIEGAWELEPKIKELVESNELAKQVWEYSLNLENLNRNAGVHAAALV
VDSQKELWHKTPLFASEKTGGIVTQYSMKYLEPVDLIKFDFLGLKTLTVI
DDALKIIKTQHKISVDFLSLDMDDPKVYKTIQSGDTVGIFQIESGMFQGL
NKRLRPSSFEDIIAIIALGRPGPMESGMVDDFVNRKHGVEPIAYAFKELE
PILKPTYGTIVYQEQVMQIVQTIGGFSLGEADLIRRAMGKKDAQIMADNK
AKFVEGAKNLGHDGQKAANLWDLIVKFAGYGFNKSHSAAYAMITFQTAYL
KTYYKHEFMAAMLTSESNKIESVARYIDEVRALEIEVMPPHINSSMQDFS
VAEFKNQKGELEKKIVFGLGAIKGVGGEPIKNIIEERAKGDYKSLEDFIS
RVDFSKLTKKSLEPLVKSGSLDNLGYTRKTMLANLDLICDAGRAKDKANE
MMQGGNSLFGAMEGGTKEQVVLDMIDLGEHDAKTLLECEYETLGIHVSGN
PLDEFKEEIKGFKNLVKSIDIEELEIGSQAYLLGKIMEVKKKIGKRSGKP
YGIADILDRYGKFELMLFEKQLNALEELDINKPLVFKCKIEEQEEVVRLR
LFEILDLESAREVKIPKARYKDPEKQKEEVREIPPMEMLASSSCSLAIVL
ENDVKKEFLRQIKESALKHQGKRPLYLIIKDKDKQFKIQSDLMVNEKIKD
DFKGLEWRDLA
>gid:1491  HP1470  DNA polymerase I (polA)
MMEQPVIKEGTLALIDTFAYLFRSYYMSAKNKPLTNDKGFPTGLLTGLVG
MVKKFYKDRKNMPFIVFALESQTKTKRAEKLGEYKQNRKDAPKEMLLQIP
IALEWLQKMGFVCVEVNGFEADDVIASLATLSPYKTRIYSKDKDFNQLLS
DKIALFDGKTEFLAKDCVEKYGILPSQFTDYQGIVGDSSDNYKGVKGIGS
KNAKELLQRLGSLEKIYENLDLAKNLLSPKMYRALIHDKASAFLSKELAT
LERGCIKEFDFLSCAFPSENPLLKIKDELKEYGFISTLRDLENSPTPLIL
DNAPLLDNTPALDNTPKKSCMIVLESAAPLSAFLEKLEKTNARVFARLVL
DKEKKVLALAFLYEDQGYFLPLEEALFSPFSLEFLQNAFFKMLQHAQIIG
HDLKPLLSFLKAKYQVPLENIRIQDTQILAFLKNPEKVGFDEVLKEYLKE
ELIPHEKIKDFKTKAEKLELLSVELNALKRLCEYFEKGGLEENLLSLARE
IETPFMKVLMGMEFQGFKIDAPYFKRLEQEFKNELHVLERQILELIGVDF
NLNSPKQLSEVLYDKLGLPKNKSHSTDEKSLLKILDKHPSIALILEYREL
NKLFNTYTTPLLRLKDKDDKIHTTFIQTGTATGRLSSHSPNLQNIPVRSP
KGLLIRKGFIASSKEYCLLGVDYSQIELRLLAHFSQDKDLMEAFLKGRDI
HLETSKALFGEYLAKEKRSIAKSINFGLVYGMGSKKLSETLNISLNEAKS
YIEAYFKRFPSIKDYLNRMKEEILKTSKAFTLLGRYRVFDFTGANDYVKG
NYLREGVNAIFQGSASDLLKLGMLKVSERFKNNPSVRLLLQVHDELIFEI
EEKNAPELQQEIQRILNDEVYPLRVPLETSAFIAKRWNELKG
>gid:1499  HP1478  DNA helicase II (uvrD)
MMDFEKSILDHLNGAQKIAASHIQGPLLILAGAGSGKTKTLTSRLAYLIG
VCGVPSENTLTLTFTNKASKEMQERALKLLKNQALIPPLLCTFHRFGLLF
LRQHMNLLKRACDFSVLDSDEVKTLCKQLKISNFRASISQIKNGMMDLSM
QDSECYKAYELYQNALKKDNLVDFDDLLFLSLKILQDNETIAKETSERYH
YIMVDEYQDTNALQLEFLKKLSFTHHNLCVVGDDDQSIYGFRGADISNIL
NFSKHFKGAKIVKLETNYRSSAEILACANSLISHNQHRHIKTLQSFKGSH
KSVVCKEYLTQKEESLDVAYQIKALLKKGENLENIAILYRLNGLSRSIEE
SLNALNIPYRLIGALSFYERAEIKDALAFMHLVAKKDDRFFIKRVLNKPP
RGLGKITQEWIFSLLDEEGLNLEEALKLGAFKDKLNPKNEYALKQFIAMI
GRLREAFEISVEEFCSRFLEETNLLKSYEKEDNYEEREGFVKELLTLVKE
YFKTNPTHSLLDFLNESVLDAHNTENAQKVSCMSVHMSKGLEFKHVFVIG
LEEGFFPHRGFNQESDLEEERRLAYVAITRAKEELQLSYVKERSYFGRKI
SCSPSVFLEEAQLLNQDNPPKQDHQKDAPIKVGDLIRHKIFGTGRVLGVE
KGLSGLCLKINCGGNVYDKISEKFVEKVDNGF
>gid:1503  HP1482  H. pylori predicted coding region HP1482
MQDELFETEKIPPKNTKNTKNAPKKSFEEHVHSLERAIDRLNDPNLSLKD
GMDLYKTAMQELFLAQKLLENAYLEHEKLQTPDQKA
>gid:1520  HP1499  H. pylori predicted coding region HP1499
MSSVQILSNLNYPKVITEGLRNSLNTHIAVAFLKYSGVEVIQDTLIDSLE
KGAEFEIIVGLDFKTTDSKSIRFLLDLNKTYKKLRFYCYGDKENNKTDIV
FHPKIYMFDNGKEKTSIIGSTNLTKGGLENNFEVNTIFTEKKPLYYTQLN
AIYNSIKYADSLFTPNEEYLQNYNEVFSAIIKNEQKVSKDKSIQEKIKEI
EKQEKLLPGTIPSIKAMIVEFIFACEKKGVKQVALQDIYQALEERIKKKS
GDTNTKAILLGTLSGANSTTMC
>gid:1539  HP1518  H. pylori predicted coding region HP1518
MIRFAHISLKDFIKKHNPQTPTKETIENFEKEINSLLENAPRQDDEEFQK
NEINKFLGKVSSIEKHYTYKSVALKNAFINNDKLLKHVFLSDVRN
>gid:1541  HP1520  H. pylori predicted coding region HP1520
MGLKIINIENCYGIGKIQKTSLDFSKSNSYLLYAQNGVFKTSFAKSLTDL
INNEMPKDNFYPNRKSKIEIEFNGEKILKENVAVFHSYDEEFSSEDSVTT
FMAKSDLKQQYDNILLELEKEKKALLKSLRDIASGFDYEEEIKTIKNEKN
KSFYEILDNHLTEIESSEKHYSFKYRDIFDGSKKVKDFVNKHHDLIEQYF
NKYQELLSQSKIFKHMNSGDFGTNHADDLKKALENNRFFKANHSLKIAGE
EITNYQKLSDIFENEKNRILNNEELKESFDKIEKVINANKELKAFKDAIS
KDNTLLTEFLDYDSFRKKVLFSYLKQVIQNVKSLVNLYREKKPEIEEIIK
QASKDQKEWESVIEIFNQRFLVPFKVELQNQKDILLNKDAAQFRFIFSDD
NQDMNVQKEDLQKHLSGGEKESVIYLTNLV
>gid:1543  HP1523  DNA recombinase (recG)
MQETDNLLKTLNVKSLLEALLVYTPKGYKDLNLLERFETGLSGVLEVGIL
EKRNYAKVLKIFAYSKRFYKNLELVFFNYSAFHHSQFKTGESLFIYGKLE
QSSFNQAYIINTPKIITKFGKISLIFKKVKNHKKIQENLQKLISLENLKK
EGVKENIAHLLLEIFFPTPHFVKDFETNKNFPSQHLNALKYIEMLFYMKN
LERKKLQFGAKIACPNNNERLKAFIASLPFKLTRDQQNAIKEIQNDLTSS
IACKRLIIGDVGCGKTMVILASMVLTYPNKTLLMAPTSILAKQLYNEALK
FLPPYFEVELLLGGSYKKRSNHLFETITHVVIGTQALLFDKRDLNEFALV
ITDEQHRFGTKQRYQLEKMASSKGNKPHSLQFSATPIPRTLALAKSAFVK
TTMIREIPYPKEIETLVLHKRDFKIVMEKISEEIAKNHQVIVVYPLVNES
EKIPYLSLSEGASFWQKRFKKVYTTSGQDKNKEEVIEEFRESGSILLATT
LIEVGISLPRLSVMVILAPERLGLATLHQLRGRVSRNGLKGYCFLCTIQE
ENERLEKFADELDGFKIAELDLEYRKSGDLLQGGEQSGNSFEYIDLAKDE
NIIAEVKRDFLKAASVSRGTFEN
>gid:1546  HP1526  exodeoxyribonuclease (lexA)
MKLISWNVNGLRACMTKGFMDFFNSVDADVFCIQESKMQQEQNTFEFKGY
FDFWNCAIKKGYSGVVTFTKKEPLSVSYGINMEEHDKEGRVITCEFESFY
LVNVYTPNSQQALSRLSYRMSWEVEFKKFLKALELKKPVIVCGDLNVAHN
EIDLENPKTNRKNAGFSDEEREKFSELLNAGFIDTFRYFYPNKEKAYTWW
SYMQQARDKNIGWRIDYFLCSNPLKTRLKDALIYKDILGSDHCPVGLELV
>gid:1548  HP1527  H. pylori predicted coding region HP1527
MKKSLCLSFFLTFSNPLQALVIELLEEIKTSPHKGTFKAKVLDSKKPRQV
LGVYNISPHKKLTLTITHISTAIVYQPLDEKLSLETTLNPNRPTIPRNTQ
IVFSSKELKESHPHQMPSLNAPMQKPQNKPHSSQQPSQNFSYPEPKLGSK
NSKNSLLQPLAIPSKISPTNETQTPTNDTKPPLKHSSEDQESNLFITPPT
EKTLPNNTSNADISENNESNENKDNVEKQAIRDANIKEFACGKWVYDDEN
LQAYRPSILKRVDEDKQTATDITPCDYSTAENKSGKIITPYTKISVHKTE
PLEEPQTFEAKNNFAILQARSSTEKCKRARARKDGTTRQCYLIEEPLKQA
WESEYEITTQLVKAIYERPKQDDQVEPTFYETSELAYSSTRKSEITHNEL
NLNEKFMEFVEVYEGHYLNDIIKESSEYKEWVKNHVRFKEGVCMALEIEE
QPRAKSTPLSIENSRVVCVKKGNYLFNEV
>gid:1550  HP1529  chromosomal replication initiator protein (dnaA)
MDTNNNIEKEILALVKQNPKVSLIEYENYFSQLKYNPNASKSDIAFFYAP
NQVLCTTITAKYGALLKEILSQNKVGMHLAHSVDVRIEVAPKIQINAQSN
INYKAIKTSVKDSYTFENFVVGSCNNTVYEIAKKVAQSDTPPYNPVLFYG
GTGLGKTHILNAIGNHALEKHKKVVLVTSEDFLTDFLKHLDNKTMDSFKA
KYRHCDFFLLDDAQFLQGKPKLEEEFFHTFNELHANSKQIVLISDRSPKN
IAGLEDRLKSRFEWGITAKVMPPDLETKLSIVKQKCQLNQITLPEEVMEY
IAQHISDNIRQMEGAIIKISVNANLMNASIDLNLAKTVLEDLQKDHAEGS
SLENILLAVAQSLNLKSSEIKVSSRQKNVALARKLVVYFARLYTPNPTLS
LAQFLDLKDHSSISKMYSGVKKMLEEEKSPFVLSLREEIKNRLNELNDKK
TAFNSSE
>gid:1555  HP1534  IS605 transposase (tnpB)
MLNAIKFRIYPNAQQKELISKHFGCSRVVYNYFLDYRQKQYAKGIKETYF
TMQKVLTQIKRQEKYHYLNECNSQSLQMALRQLVSAYDNFFSKRARYPKF
KSKKNAKQSFAIPQNIETKTETQTIALPKFKEGIKAKLHRDLPKDSVIKQ
AFISCIADQYFCSLSYETKEPIPKPTIIKKAVGLDMGLRTLIVTSDKIGY
PHIRFYQKLEKKLTKAQRRLSKKVKDSNNRKKQAKKVSRLHLACSNTRDD
YLHKISNEITNQYDLIGVETLNVKALMRTYHSKSLANASWGKFLTMLEYK
AQRKGKTLLSIDRFFPSSQLCSYCGVNTGKKHESITKFTCPHCKTTHHRD
YNASVNIRNYALGMLDDRHKVKTDKARVGIIRSDYTHHTNECVKACGASS
NGVSSKYGNILDLASYGAMKQEKAQSL
>gid:1556  HP1535  IS605 transposase (tnpA)
MRKNHYPLRGYISTNRSKHNLKAHLILVCKYRKKLLQGDLNNFIKSVIDE
IATQSNFIIIAMESDIDHLHLMVQYIPRMSISSIISRIKQITTYRVWRDK
RFIPLLQKHFWKEKTFWTDGFFVCSIGEANPETIKAYIENQG
>gid:1561  HP1541  transcription-repair coupling factor (trcF)
MIQSSLYRALNKGFDYQILACKDFKESELAKEVISYFKPNTKAILFPEFR
AKKNDDLRSFFEEFLQLLGGLREFYQALENKQETIIIAPISALLHPLPKK
ELLESFKITLLEKYNLKDLKDKLFYYGYEILDLVEVEGEASFRGDIVDIY
APNSKAYRLSFFDTECESIKEFDPITQMSLKEDLLEIEIPPTLFSLDESS
YKDLKTKVEQSPLNSFSKDLTSFGLWFLGEKAQDLLIVYKSIISPRALEE
IQELASLNELDCERFKFLKVLENAQGYEDLEIHAHALEGFIALHSNHKIT
LLAPNKTILDNAISALDAGNMECVIAPFVLNFKTPDGIFISLNSFERKKK
RQKSKLALNELNPGEWVVHDDYGVGVFSQLVQHSVLGSKRDFLEIAYLGE
DKLLLPVENLHLIARYVAQSDSVPAKDRLGKGSFLKLKAKVRTKLLEIAS
KIIELAAERNLILGKKMDVHLAELEVFKSHAGFEYTSDQEKAIAEISKDL
SSHRVMDRLLSGDVGFGKTEVAMHAIFCAFLNGFQSALVVPTTLLAHQHF
ETLRARFENFGVKVARLDRYASEKNKLLKAVELGQVDALIGTHAILGAKF
KNLGLVVVDEEHKFGVKQKEALKELSKSVHFLSMSATPIPRTLNMALSQI
KGISSLKTPPTDRKPSRTFLKEKNDELLKEIIYRELRRNGQIFYIHNHIA
SILKVKTKLEDLIPKLKIAILHSQINANESEEIMLEFAKGNYQVLLCTSI
VESGIHLPNANTIIIDNAQNFGLADLHQLRGRVGRGKKEGFCYFLIEDQK
SLNEQALKRLLALEKNSYLGSGESVAYHDLEIRGGGNLLGQDQSGHIKNI
GYALYTRMLEDAIYELSGGKKRLEKSVEIQLGVSAFLNPELIASDSLRLD
LYRRLSLCENTDEVGQIHEEIEDRFGKIDDLSAQFLQIITLKILANQLGI
IKLSNFNQNITITYSDEKKESLKAPSKDDNDILETLLKHLRAQISLKRR
>gid:1573  HP1553  helicase
MDTKRQCMALKASAGSGKTFALSVRFLALLFKGANPSEILTLTFTKKATA
EMKERILDYLKILQQENLENEKEKSQNILKELEEKYHLDPSLVQNSAPKI
YQRFLNAEIRISTIDAFFQSILRKFCWFVGLSANFEVNEDTKAHQQQLNE
GFLSALNGEQLEALSVFIAQCLSYDSYTSDSILERLRFLKNKLYLFDPNK
KEPAFDEKDFLEKLRSLNEQIQSIETASDRAKTAIKCDDFRGFLNSSLTW
LEKKSEYQSFKKLKSEIPTLESECEEIENDLKRYYEAKETAIFKKFPKFI
QLYDNATSKIQALDFDAIKDKVHVLLNGYEEMPAEFFYFRLDSKIAHILI
DEFQDTSLNDYKILAPFIDEIKAGIGQAKWHRSVFFVGDVKQSIYAFRGS
FSSLFESVSKDFYHDNLEFNHRSAPLIINYVNTIFKKAYQNSPTAYLEQK
YPKTSQNKHVTDGYVKVSLVADERELLLDQVLQEAQNLLEHRIEPKDITI
LCATNDDALEIKNYLQERLSAIRPSTESSAKLSQFVESKIIKNALEYALA
EEPYKPFYKHSVLKLAGYLHDDAIALAGFNPKKESVAGFVWKVMEQFELY
GEPAQSCLELAVGCEDADGFLEKLETKAIASSHSKGAQIMTIHKSKGMQF
PYVIVCERLGKPNSSHSNQLLEEYDGTELLRLYYRMKNREVVDKDYARAL
DKEEAAKDHEEINVYYVAFTRAELGLIVVAKDKKESKKESKNKTMREKLD
LVPLEEGEIAPVISPQKEPLITSTLIKPHAYGEQVQEIEEEPSDYEKNND
QEAINFGIALHKGLEYQYAYNIPKQSVLEYLNYHHGFYGLDYQALEESLE
LFENDAEIQALFKNLPLKGEAAFLFQGVVSRIDVLLWDRGQNLYVLDYKS
SQNYQQSHKAQVSHYAEFLKTQAPHFKIQAGIIYAHKRLLEKLWV
>gid:1593  HP1573  conserved hypothetical protein
MFIDTHCHLDHKDYENDLEEVLKESLEKGVTQCVIPGADMKDLNRAIEIS
EKFEGVFFAIGAHPYDVESFDESLFEKFVGHQKCVAIGECGLDYYRLPEL
NERENYKSKQKEIFTKQIEFSIQHNKPLIIHIREASFDSLNLLKNYPKAF
GVLHCFNADGMLLELSDRFYYGIGGVSTFKNAKRLVEILPKIPKNRLLLE
TDSPYLTPHPFRGTRNSPTYIPLIAQKIAEIINIETEELASLSTHNAQML
FSFP