Gene list
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COG category: Replication, recombination and repair
Organism: Helicobacter pylori 26695, 26695
Number of genes found: 123
Show UniProt / TrEMBL protein name | View in Fasta format (DNA) | View in Fasta format (Protein) | ||||
Helicobacter pylori 26695, 26695 | ||||||||
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Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
HP0012 | DNA primase (dnaG) | chromosome | CDS | 9911 | 1680 | + | 0.401786 | |
HP0036 | H. pylori predicted coding region HP0036 | chromosome | CDS | 35544 | 1005 | + | 0.39403 | |
HP0050 | adenine specific DNA methyltransferase (dpnA) | chromosome | CDS | 49335 | 699 | - | 0.393419 | |
HP0051 | cytosine specific DNA methyltransferase (DDEM) | chromosome | CDS | 50030 | 1068 | - | 0.388577 | |
HP0054 | adenine/cytosine DNA methyltransferase | chromosome | CDS | 53715 | 2472 | - | 0.329288 | |
HP0062 | H. pylori predicted coding region HP0062 | chromosome | CDS | 67039 | 261 | + | 0.394636 | |
HP0065 | H. pylori predicted coding region HP0065 | chromosome | CDS | 69191 | 354 | + | 0.355932 | |
HP0092 | type II restriction enzyme M protein (hsdM) | chromosome | CDS | 98083 | 834 | + | 0.398082 | |
HP0116 | DNA topoisomerase I (topA) | chromosome | CDS | 124658 | 2211 | + | 0.397105 | |
HP0142 | A/G-specific adenine glycosylase (mutY) | chromosome | CDS | 153727 | 987 | - | 0.377913 | |
HP0153 | recombinase (recA) | chromosome | CDS | 162928 | 1044 | + | 0.442529 | |
HP0242 | H. pylori predicted coding region HP0242 | chromosome | CDS | 251967 | 285 | - | 0.350877 | |
HP0247 | ATP-dependent RNA helicase, DEAD-box family (deaD) | chromosome | CDS | 255585 | 1479 | + | 0.43002 | |
HP0259 | exonuclease VII, large subunit (xseA) | chromosome | CDS | 268080 | 1263 | + | 0.400633 | |
HP0260 | adenine specific DNA methyltransferase (mod) | chromosome | CDS | 269378 | 1155 | - | 0.322078 | |
HP0263 | adenine specific DNA methyltransferase (hpaim) | chromosome | CDS | 271795 | 759 | + | 0.384717 | |
HP0333 | DNA processing chain A (dprA) | chromosome | CDS | 347607 | 813 | + | 0.420664 | |
HP0334 | conserved hypothetical protein | chromosome | CDS | 348416 | 405 | + | 0.441975 | |
HP0348 | single-stranded-DNA-specific exonuclease (recJ) | chromosome | CDS | 354891 | 1551 | - | 0.398453 | |
HP0356 | H. pylori predicted coding region HP0356 | chromosome | CDS | 366226 | 759 | + | 0.347826 | |
HP0367 | H. pylori predicted coding region HP0367 | chromosome | CDS | 376074 | 609 | - | 0.367816 | |
HP0387 | primosomal protein replication factor (priA) | chromosome | CDS | 395753 | 1860 | + | 0.383333 | |
HP0406 | H. pylori predicted coding region HP0406 | chromosome | CDS | 418383 | 591 | + | 0.377327 | |
HP0413 | transposase-like protein, PS3IS | chromosome | CDS | 426032 | 807 | - | 0.348203 | |
HP0414 | IS200 insertion sequence from SARA17 | chromosome | CDS | 426876 | 417 | + | 0.388489 | |
HP0425 | H. pylori predicted coding region HP0425 | chromosome | CDS | 441185 | 1254 | - | 0.362839 | |
HP0432 | protein kinase C-like protein | chromosome | CDS | 450804 | 891 | + | 0.337823 | |
HP0434 | H. pylori predicted coding region HP0434 | chromosome | CDS | 452159 | 1170 | + | 0.307692 | |
HP0435 | H. pylori predicted coding region HP0435 | chromosome | CDS | 453399 | 576 | + | 0.347222 | |
HP0436 | H. pylori predicted coding region HP0436 | chromosome | CDS | 453958 | 366 | + | 0.352459 | |
HP0437 | IS605 transposase (tnpA) | chromosome | CDS | 454330 | 429 | - | 0.333333 | |
HP0438 | IS605 transposase (tnpB) | chromosome | CDS | 454828 | 1284 | + | 0.36838 | |
HP0440 | DNA topoisomerase I (topA) | chromosome | CDS | 457297 | 2034 | - | 0.331858 | |
HP0447 | conserved hypothetical protein | chromosome | CDS | 465045 | 1083 | + | 0.374885 | |
HP0449 | H. pylori predicted coding region HP0449 | chromosome | CDS | 466757 | 1419 | + | 0.324877 | |
HP0451 | H. pylori predicted coding region HP0451 | chromosome | CDS | 468417 | 285 | + | 0.361403 | |
HP0478 | adenine specific DNA methyltransferase (VSPIM) | chromosome | CDS | 500131 | 1638 | + | 0.330281 | |
HP0481 | adenine specific DNA methyltransferase (MFOKI) | chromosome | CDS | 504443 | 636 | + | 0.36478 | |
HP0489 | H. pylori predicted coding region HP0489 | chromosome | CDS | 515693 | 888 | + | 0.387387 | |
HP0500 | DNA polymerase III beta-subunit (dnaN) | chromosome | CDS | 526549 | 1125 | + | 0.360889 | |
HP0501 | DNA gyrase, sub B (gyrB) | chromosome | CDS | 527686 | 2322 | + | 0.402239 | |
HP0507 | conserved hypothetical protein | chromosome | CDS | 533202 | 639 | + | 0.356808 | |
HP0541 | cag pathogenicity island protein (cag20) | chromosome | CDS | 572736 | 1113 | - | 0.403414 | |
HP0585 | endonuclease III (nth) | chromosome | CDS | 615309 | 657 | - | 0.414003 | |
HP0593 | adenine specific DNA methyltransferase (mod) | chromosome | CDS | 626246 | 1797 | + | 0.372287 | |
HP0602 | endonuclease III | chromosome | CDS | 638932 | 657 | + | 0.3379 | |
HP0615 | DNA ligase (lig) | chromosome | CDS | 659069 | 1971 | - | 0.395738 | |
HP0621 | DNA mismatch repair protein (MutS) | chromosome | CDS | 666410 | 2289 | - | 0.384884 | |
HP0650 | H. pylori predicted coding region HP0650 | chromosome | CDS | 696063 | 591 | + | 0.390863 | |
HP0661 | ribonuclease H (rnhA) | chromosome | CDS | 709533 | 432 | + | 0.421296 | |
HP0664 | H. pylori predicted coding region HP0664 | chromosome | CDS | 711827 | 516 | + | 0.333333 | |
HP0675 | integrase/recombinase (xerC) | chromosome | CDS | 725498 | 1089 | + | 0.382002 | |
HP0676 | methylated-DNA--protein-cysteine methyltransferase (dat1) | chromosome | CDS | 726648 | 507 | - | 0.370809 | |
HP0688 | H. pylori predicted coding region HP0688 | chromosome | CDS | 739466 | 501 | + | 0.373253 | |
HP0689 | H. pylori predicted coding region HP0689 | chromosome | CDS | 739987 | 291 | + | 0.360825 | |
HP0701 | DNA gyrase, sub A (gyrA) | chromosome | CDS | 752512 | 2484 | + | 0.414654 | |
HP0705 | excinuclease ABC subunit A (uvrA) | chromosome | CDS | 757282 | 2808 | - | 0.403134 | |
HP0717 | DNA polymerase III gamma and tau subunits (dnaX) | chromosome | CDS | 770469 | 1737 | - | 0.388601 | |
HP0732 | H. pylori predicted coding region HP0732 | chromosome | CDS | 787387 | 357 | - | 0.355742 | |
HP0810 | conserved hypothetical protein | chromosome | CDS | 864477 | 603 | - | 0.349917 | |
HP0821 | excinuclease ABC subunit C (uvrC) | chromosome | CDS | 873393 | 1785 | + | 0.378711 | |
HP0823 | conserved hypothetical protein | chromosome | CDS | 876454 | 345 | + | 0.344928 | |
HP0835 | histone-like DNA-binding protein HU (hup) | chromosome | CDS | 887585 | 285 | + | 0.403509 | |
HP0868 | H. pylori predicted coding region HP0868 | chromosome | CDS | 919540 | 462 | - | 0.344156 | |
HP0877 | Holliday junction endodeoxyribonuclease (ruvC) | chromosome | CDS | 929787 | 474 | - | 0.424051 | |
HP0883 | Holliday junction DNA helicase (ruvA) | chromosome | CDS | 932818 | 552 | - | 0.422101 | |
HP0893 | H. pylori predicted coding region HP0893 | chromosome | CDS | 945977 | 288 | - | 0.340278 | |
HP0895 | H. pylori predicted coding region HP0895 | chromosome | CDS | 946592 | 378 | - | 0.328042 | |
HP0911 | rep helicase, single-stranded DNA-dependent ATPase (rep) | chromosome | CDS | 962631 | 2028 | + | 0.398915 | |
HP0925 | recombinational DNA repair protein (recR) | chromosome | CDS | 988604 | 582 | + | 0.371134 | |
HP0964 | H. pylori predicted coding region HP0964 | chromosome | CDS | 1022249 | 1092 | - | 0.389194 | |
HP0973 | H. pylori predicted coding region HP0973 | chromosome | CDS | 1034745 | 1062 | + | 0.39548 | |
HP0981 | exonuclease VII-like protein (xseA) | chromosome | CDS | 1044772 | 366 | + | 0.398907 | |
HP0988 | IS605 transposase (tnpA) | chromosome | CDS | 1051052 | 429 | - | 0.333333 | |
HP0989 | IS605 transposase (tnpB) | chromosome | CDS | 1051550 | 1284 | + | 0.367601 | |
HP0995 | integrase/recombinase (xerD) | chromosome | CDS | 1056158 | 1068 | - | 0.315543 | |
HP0997 | IS605 transposase (tnpB) | chromosome | CDS | 1060324 | 1284 | - | 0.36838 | |
HP0998 | IS605 transposase (tnpA) | chromosome | CDS | 1061677 | 429 | + | 0.333333 | |
HP1008 | IS200 insertion sequence from SARA17 | chromosome | CDS | 1069967 | 417 | + | 0.388489 | |
HP1009 | site-specific recombinase | chromosome | CDS | 1070508 | 561 | - | 0.283422 | |
HP1022 | H. pylori predicted coding region HP1022 | chromosome | CDS | 1085284 | 837 | + | 0.377539 | |
HP1026 | conserved hypothetical helicase-like protein | chromosome | CDS | 1088877 | 1176 | + | 0.411565 | |
HP1059 | Holliday junction DNA helicase (ruvB) | chromosome | CDS | 1120723 | 1011 | + | 0.41543 | |
HP1081 | H. pylori predicted coding region HP1081 | chromosome | CDS | 1139469 | 624 | - | 0.376603 | |
HP1089 | H. pylori predicted coding region HP1089 | chromosome | CDS | 1148516 | 2337 | + | 0.350877 | |
HP1095 | IS605 transposase (tnpB) | chromosome | CDS | 1156724 | 1284 | - | 0.36838 | |
HP1096 | IS605 transposase (tnpA) | chromosome | CDS | 1158077 | 429 | + | 0.333333 | |
HP1114 | excinuclease ABC subunit B (uvrB) | chromosome | CDS | 1175638 | 1977 | - | 0.407688 | |
HP1121 | cytosine specific DNA methyltransferase (BSP6IM) | chromosome | CDS | 1187005 | 939 | - | 0.362087 | |
HP1146 | H. pylori predicted coding region HP1146 | chromosome | CDS | 1210202 | 510 | - | 0.360784 | |
HP1208 | ulcer associated adenine specific DNA methyltransferase | chromosome | CDS | 1285193 | 990 | - | 0.370707 | |
HP1228 | invasion protein (invA) | chromosome | CDS | 1303120 | 468 | + | 0.425214 | |
HP1231 | DNA polymerase III delta prime subunit (holB) | chromosome | CDS | 1305342 | 657 | + | 0.368341 | |
HP1245 | single-strand DNA-binding protein (ssb) | chromosome | CDS | 1320618 | 540 | - | 0.433333 | |
HP1247 | H. pylori predicted coding region HP1247 | chromosome | CDS | 1321749 | 1023 | - | 0.363636 | |
HP1323 | ribonuclease HII (rnhB) | chromosome | CDS | 1383299 | 630 | - | 0.425397 | |
HP1347 | uracil-DNA glycosylase (ung) | chromosome | CDS | 1407180 | 702 | - | 0.424501 | |
HP1351 | H. pylori predicted coding region HP1351 | chromosome | CDS | 1411346 | 873 | - | 0.308133 | |
HP1352 | adenine specific DNA methyltransferase (HINFIM) | chromosome | CDS | 1412218 | 1080 | - | 0.332407 | |
HP1362 | replicative DNA helicase (dnaB) | chromosome | CDS | 1422915 | 1467 | - | 0.407635 | |
HP1367 | type IIS restriction enzyme M1 protein (mod) | chromosome | CDS | 1428975 | 783 | - | 0.356322 | |
HP1368 | type IIS restriction enzyme M2 protein (mod) | chromosome | CDS | 1429744 | 864 | - | 0.365741 | |
HP1370 | type III restriction enzyme M protein (mod) | chromosome | CDS | 1432418 | 867 | + | 0.367935 | |
HP1387 | DNA polymerase III epsilon subunit (dnaQ) | chromosome | CDS | 1448622 | 1053 | + | 0.396961 | |
HP1393 | DNA repair protein (recN) | chromosome | CDS | 1453376 | 1575 | - | 0.39746 | |
HP1410 | H. pylori predicted coding region HP1410 | chromosome | CDS | 1479704 | 1185 | + | 0.363713 | |
HP1438 | conserved hypothetical lipoprotein | chromosome | CDS | 1509160 | 1017 | + | 0.347099 | |
HP1460 | DNA polymerase III alpha-subunit (dnaE) | chromosome | CDS | 1528911 | 3636 | - | 0.414191 | |
HP1470 | DNA polymerase I (polA) | chromosome | CDS | 1540697 | 2679 | - | 0.387458 | |
HP1478 | DNA helicase II (uvrD) | chromosome | CDS | 1549611 | 2049 | - | 0.402147 | |
HP1482 | H. pylori predicted coding region HP1482 | chromosome | CDS | 1556249 | 261 | - | 0.367816 | |
HP1499 | H. pylori predicted coding region HP1499 | chromosome | CDS | 1571852 | 819 | + | 0.321123 | |
HP1518 | H. pylori predicted coding region HP1518 | chromosome | CDS | 1594490 | 288 | - | 0.298611 | |
HP1520 | H. pylori predicted coding region HP1520 | chromosome | CDS | 1595770 | 1293 | - | 0.264501 | |
HP1523 | DNA recombinase (recG) | chromosome | CDS | 1602088 | 1872 | - | 0.379274 | |
HP1526 | exodeoxyribonuclease (lexA) | chromosome | CDS | 1605024 | 753 | - | 0.378486 | |
HP1527 | H. pylori predicted coding region HP1527 | chromosome | CDS | 1605956 | 1440 | - | 0.388889 | |
HP1529 | chromosomal replication initiator protein (dnaA) | chromosome | CDS | 1607624 | 1374 | - | 0.402475 | |
HP1534 | IS605 transposase (tnpB) | chromosome | CDS | 1613001 | 1284 | - | 0.367601 | |
HP1535 | IS605 transposase (tnpA) | chromosome | CDS | 1614354 | 429 | + | 0.333333 | |
HP1541 | transcription-repair coupling factor (trcF) | chromosome | CDS | 1618609 | 3000 | - | 0.400333 | |
HP1553 | helicase | chromosome | CDS | 1632600 | 2838 | - | 0.385483 | |
HP1573 | conserved hypothetical protein | chromosome | CDS | 1653857 | 765 | - | 0.39085 |