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2024-05-18 18:09:28

Gene list

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COG category: Transcription
Genomic element: chromosome

Number of genes found: 147

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Geobacter sulfurreducens PCA, PCA
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA GSU3387 transcriptional regulator, AraC/XylS familychromosome CDS3725285 834 - 0.635492
NA GSU1120 response regulatorchromosome CDS1204498 405 + 0.592593
NA GSU1714 BRO family protein, truncationchromosome CDS1878701 306 - 0.519608
NA GSU0581 cold-shock domain family proteinchromosome CDS613202 201 + 0.537313
NA GSU0951 transcriptional regulator, TetR familychromosome CDS1023807 591 - 0.63621
NA GSU0473 transcriptional regulator, putativechromosome CDS502666 1005 + 0.643781
NA GSU2798 acetyltransferase, GNAT familychromosome CDS3077578 804 - 0.708955
NA GSU1293 DNA-binding response regulator, LuxR familychromosome CDS1409987 651 + 0.582181
NA GSU2540 transcriptional regulator, Cro/CI familychromosome CDS2804108 546 - 0.606227
NA GSU1485 ribonuclease R, putativechromosome CDS1626769 2292 + 0.625218
NA GSU2442 RelA/SpoT domain proteinchromosome CDS2675932 1023 - 0.372434
NA GSU1626 transcriptional regulator, GntR familychromosome CDS1780852 726 + 0.553719
NA GSU0682 DNA-binding response regulator, LuxR familychromosome CDS718009 648 + 0.611111
NA GSU1231 response regulatorchromosome CDS1334870 396 + 0.555556
NA GSU1654 response regulator, putativechromosome CDS1812034 1050 - 0.572381
NA GSU0235 S1 RNA binding domain proteinchromosome CDS242523 2286 - 0.685914
NA GSU0018 transcriptional regulator, GntR family/aminotransferase class-Ichromosome CDS28904 1437 - 0.656228
NA GSU2574 response regulatorchromosome CDS2835091 1107 - 0.63234
NA GSU2980 transcriptional regulator, CopG familychromosome CDS3271194 420 - 0.6
NA GSU0178 conserved hypothetical proteinchromosome CDS193093 345 - 0.588406
NA GSU2666 transcriptional regulator, TetR familychromosome CDS2940336 642 - 0.61838
NA GSU2952 transcriptional regulator, ArsR familychromosome CDS3251800 342 + 0.619883
NA GSU1342 transcriptional regulator, LysR familychromosome CDS1468634 909 - 0.633663
NA GSU1102 DNA-binding response regulatorchromosome CDS1187640 678 - 0.597345
NA GSU1879 DNA-binding response regulatorchromosome CDS2057966 717 + 0.592748
NA GSU0732 nucleoside diphosphate kinase regulator protein, putativechromosome CDS778861 429 - 0.601399
NA GSU2345 rsbU-related proteinchromosome CDS2563583 750 - 0.630667
NA GSU1542 transcriptional regulator, Cro/CI familychromosome CDS1696510 294 - 0.547619
NA GSU2587 transcriptional regulator, MarR familychromosome CDS2850867 429 + 0.55711
NA GSU1713 conserved hyothetical protein, truncationchromosome CDS1878135 345 - 0.498551
NA GSU2698 transcriptional regulator, TetR familychromosome CDS2978501 612 - 0.563725
NA GSU2354 transcriptional regulator, IclR familychromosome CDS2574831 777 - 0.593308
NA GSU1359 helicase, putativechromosome CDS1484238 3126 + 0.626999
NA GSU2113 transcriptional regulator, putativechromosome CDS2332015 432 + 0.560185
NA GSU1358 conserved hypothetical proteinchromosome CDS1481813 2403 + 0.582189
NA GSU2523 transcriptional regulator, LysR familychromosome CDS2780905 897 + 0.686734
NA GSU1525 RNA polymerase sigma-70 factor familychromosome CDS1671264 987 + 0.573455
NA GSU2129 hypothetical proteinchromosome CDS2347707 309 - 0.420712
NA GSU3189 hypothetical proteinchromosome CDS3496070 369 - 0.558266
NA GSU1934 transcriptional activator, putative, Baf familychromosome CDS2115919 768 - 0.597656
NA GSU0267 transcriptional regulator, GntR familychromosome CDS274646 747 + 0.646586
NA GSU1831 conserved hypothetical protein TIGR00281chromosome CDS1997567 588 - 0.607143
NA GSU2164 hypothetical proteinchromosome CDS2377156 3357 + 0.569556
NA GSU2227 radical SAM domain proteinchromosome CDS2443076 1029 - 0.670554
NA GSU1291 response regulatorchromosome CDS1408182 372 + 0.545699
NA GSU1551 bacterial signal domain proteinchromosome CDS1702598 1986 + 0.634441
NA GSU2670 transcriptional regulator, LuxR familychromosome CDS2944089 1293 - 0.616396
NA GSU0721 RNA polymerase sigma-E factor, putativechromosome CDS771279 546 + 0.652015
NA GSU0164 conserved hypothetical proteinchromosome CDS180981 363 + 0.561983
NA GSU2362 transcriptional regulator, MarR familychromosome CDS2588553 522 - 0.62069
NA GSU2398 conserved hypothetical proteinchromosome CDS2630792 243 + 0.522634
NA GSU2779 transcriptional regulator, MerR familychromosome CDS3058112 558 + 0.672043
NA GSU0205 transcriptional regulator, TetR familychromosome CDS215676 627 + 0.60925
NA GSU0366 transcriptional regulator, putativechromosome CDS397904 921 + 0.664495
NA GSU3127 transcriptional regulator, AraC familychromosome CDS3427883 939 + 0.635783
NA GSU3118 DNA-binding response regulatorchromosome CDS3420191 684 - 0.624269
NA GSU2817 transcriptional regulator, LysR familychromosome CDS3098717 891 - 0.549944
NA GSU1905 cold shock domain family proteinchromosome CDS2083466 201 + 0.547264
NA GSU3324 transcriptional regulator, Cro/CI familychromosome CDS3651999 639 - 0.641628
NA GSU2946 DNA-binding heavy metal response regulatorchromosome CDS3243689 672 + 0.629464
NA GSU2571 Rrf2 family proteinchromosome CDS2833441 438 - 0.673516
NA GSU2611 hypothetical proteinchromosome CDS2880625 1383 - 0.672451
NA GSU0266 transcriptional regulator, LysR familychromosome CDS273393 924 + 0.58658
NA GSU3229 DNA-binding response regulator, LuxR familychromosome CDS3543991 690 - 0.631884
NA GSU0770 transcriptional regulator, TetR familychromosome CDS826391 591 + 0.64467
NA GSU0107 parB-like domain proteinchromosome CDS122537 840 + 0.607143
NA GSU3298 transcriptional regulator, Cro/CI familychromosome CDS3618530 564 + 0.54078
NA GSU0905 hypothetical proteinchromosome CDS971391 333 - 0.663664
NA GSU2475 sigma-54 dependent transcriptional regulatorchromosome CDS2712307 2712 + 0.646018
NA GSU2094 response regulatorchromosome CDS2301233 990 - 0.557576
NA GSU1483 transcriptional regulator, MarR familychromosome CDS1623741 450 - 0.582222
NA GSU1639 Rrf2 family proteinchromosome CDS1797963 411 + 0.593674
NA GSU3396 transcriptional regulator, GntR familychromosome CDS3735764 717 + 0.622036
NA GSU0534 Rrf2 family proteinchromosome CDS566814 465 + 0.582796
NA GSU2145 DNA-binding response regulatorchromosome CDS2362526 699 - 0.556509
NA GSU0191 cold-shock domain family proteinchromosome CDS203766 201 - 0.472637
NA GSU2185 flgM family proteinchromosome CDS2395116 309 - 0.592233
NA GSU3370 transcriptional regulator, GntR familychromosome CDS3703818 708 - 0.574859
NA GSU0207 cold-shock domain family proteinchromosome CDS217397 201 + 0.532338
NA GSU2750 conserved domain proteinchromosome CDS3025675 372 - 0.66129
NA GSU2787 transcriptional regulator, LysR familychromosome CDS3066335 918 + 0.619826
NA GSU3087 transcriptional regulator, Sir2 familychromosome CDS3392958 828 - 0.613527
NA GSU1072 transcriptional regulator, IclR familychromosome CDS1161236 771 - 0.60441
NA GSU0079 transcriptional regulator, Cro/CI familychromosome CDS91135 591 - 0.585448
NA GSU0551 conserved hypothetical proteinchromosome CDS584149 342 + 0.54386
NA GSU2735 transcriptional regulator, TetR familychromosome CDS3012258 606 - 0.605611
NA GSU1382 iron-dependent repressor, putativechromosome CDS1510799 645 + 0.635659
NA GSU0175 transcriptional regulator, TetR familychromosome CDS191349 612 + 0.668301
NA GSU0399 transcriptional regulator, ArsR familychromosome CDS430266 276 + 0.666667
NA GSU2033 transcriptional regulator, putativechromosome CDS2225471 375 - 0.448
NA GSU0170 conserved hypothetical proteinchromosome CDS186838 483 + 0.645963
NA GSU1390 DNA-binding proteinchromosome CDS1519490 471 + 0.605096
NA GSU0451 DNA-binding response regulatorchromosome CDS481052 675 + 0.583704
NA GSU1268 transcriptional regulator, LysR familychromosome CDS1379856 1008 - 0.576389
NA GSU1687 ATP cone domain proteinchromosome CDS1846792 453 + 0.584989
NA GSU1702 ROK family proteinchromosome CDS1864395 957 + 0.617555
NA GSU0063 conserved hypothetical proteinchromosome CDS79477 222 + 0.635135
NA GSU1345 Rrf2 family proteinchromosome CDS1472572 462 + 0.634199
NA GSU1891 response regulatorchromosome CDS2068572 1140 - 0.557895
NA GSU3109 transcriptional regulator, IclR familychromosome CDS3412645 774 + 0.618863
NA GSU0514 transcriptional regulator, IclR familychromosome CDS548065 783 - 0.56705
NA GSU3060 transcriptional regulator, TetR familychromosome CDS3363768 612 + 0.568627
NA GSU2941 transcriptional regulator, LysR familychromosome CDS3237885 936 + 0.596154
NA GSU2177 hypothetical proteinchromosome CDS2387321 558 + 0.485663
NA GSU0254 DNA-binding response regulator, LuxR familychromosome CDS262990 648 + 0.591049
NA GSU0187 conserved hypothetical proteinchromosome CDS200953 348 - 0.646552
NA GSU2174 conserved hypothetical proteinchromosome CDS2385513 174 + 0.522988
NA GSU1956 acetyltransferase, GNAT familychromosome CDS2145490 624 - 0.448718
NA GSU1419 transcriptional regulator, Cro/CI familychromosome CDS1556494 429 + 0.610723
NA GSU0625 hypothetical proteinchromosome CDS662525 639 + 0.633803
NA GSU2202 transcriptional regulator, LysR familychromosome CDS2416007 924 - 0.590909
NA GSU0321 general secretion pathway protein L, putativechromosome CDS351544 1317 - 0.654518
NA GSU2625 transcriptional regulator, ArsR familychromosome CDS2897198 279 + 0.555556
NA GSU2741 transcriptional regulator, TetR familychromosome CDS3017725 648 - 0.597222
NA GSU1522 transcriptional regulator, putativechromosome CDS1669226 354 + 0.548023
NA GSU0049 conserved hypothetical proteinchromosome CDS64130 963 + 0.54621
NA GSU0712 hypothetical proteinchromosome CDS760735 504 - 0.605159
NA GSU2149 transcriptional regulator, ArsR familychromosome CDS2366388 375 - 0.504
NA GSU0013 transcriptional regulator, MarR familychromosome CDS21747 429 - 0.571096
NA GSU0836 nucleoside diphosphate kinase regulator protein, putativechromosome CDS895653 408 - 0.541667
dbpA GSU0189 ATP-dependent RNA helicase DbpAchromosome CDS201957 1383 + 0.63919
dinG GSU0363 ATP-dependent helicase DinGchromosome CDS394457 2523 - 0.653983
fliA GSU3053 RNA polymerase sigma factor for flagellar operonchromosome CDS3354638 753 - 0.590969
greA GSU1277 transcription elongation factor GreAchromosome CDS1393780 477 + 0.589099
greB GSU1201 transcription elongation factor GreBchromosome CDS1304794 486 + 0.627572
hrcA GSU0031 heat-inducible transcription repressor HrcAchromosome CDS40721 1029 + 0.609329
hypB GSU0305 hydrogenase accessory protein HypBchromosome CDS337596 765 + 0.586928
kdpE GSU2484 DNA-binding response regulator KdpEchromosome CDS2727480 705 + 0.68227
lexA-1 GSU0041 LexA repressorchromosome CDS51143 606 + 0.673267
lexA-2 GSU1617 LexA repressorchromosome CDS1770881 612 - 0.570261
mfd GSU0017 transcription-repair coupling factorchromosome CDS25356 3474 - 0.645941
nusA GSU1586 N utilization substance protein Achromosome CDS1738694 1158 + 0.586356
nusB GSU1692 N utilization substance protein Bchromosome CDS1850731 417 + 0.606715
nusG GSU2868 transcription antitermination protein NusGchromosome CDS3144778 528 - 0.547348
recG GSU1326 ATP-dependent DNA helicase RecGchromosome CDS1450443 2145 + 0.682517
relA GSU2236 GTP pyrophosphokinasechromosome CDS2450613 2151 - 0.574616
rhlB GSU0522 ATP-dependent RNA helicase RhlBchromosome CDS555700 1332 + 0.638889
rhlE-1 GSU0491 ATP-dependent RNA helicase RhlEchromosome CDS523215 1353 - 0.644494
rhlE-2 GSU0914 ATP-dependent RNA helicase RhlEchromosome CDS980161 1344 + 0.6875
rho GSU3108 transcription termination factor Rhochromosome CDS3410940 1248 - 0.586538
rnc GSU2228 ribonuclease IIIchromosome CDS2444101 747 - 0.649264
rpoA GSU2831 DNA-directed RNA polymerase, alpha subunitchromosome CDS3115118 1023 - 0.523949
rpoB GSU2863 DNA-directed RNA polymerase, beta subunitchromosome CDS3138159 4113 - 0.588621
rpoD GSU3089 RNA polymerase sigma factor RpoDchromosome CDS3394412 1734 - 0.578431
rpoH GSU0655 RNA polymerase sigma-32 factorchromosome CDS690757 855 - 0.511111
rpoN GSU1887 RNA polymerase sigma-54 factorchromosome CDS2065151 1446 - 0.549793
rpoZ GSU2237 DNA-directed RNA polymerase, omega subunitchromosome CDS2452823 210 - 0.580952