Gene list
Applied filters:
COG category: Transcription
Genomic element: chromosome
Number of genes found: 127
Show UniProt / TrEMBL protein name | View in Fasta format (DNA) | View in Fasta format (Protein) | ||||
Thiobacillus denitrificans ATCC 25259, ATCC 25259 | ||||||||
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Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
NA | Tbd_1338 | Transcriptional Regulator, MerR family | chromosome | CDS | 1421275 | 408 | - | 0.620098 |
NA | Tbd_1984 | Possible Transcriptional Regulator, TetR family | chromosome | CDS | 2074296 | 591 | - | 0.646362 |
NA | Tbd_1424 | Putative Transcriptional Regulator, ArsR family | chromosome | CDS | 1514572 | 477 | + | 0.656184 |
NA | Tbd_1483 | peptidase S24, LexA repressor | chromosome | CDS | 1570775 | 786 | - | 0.659033 |
NA | Tbd_1362 | transcriptional regulator, TetR family | chromosome | CDS | 1441852 | 420 | - | 0.685714 |
NA | Tbd_1736 | Putative Transcriptional Regulator, ArsR family | chromosome | CDS | 1821747 | 396 | - | 0.676768 |
NA | Tbd_1014 | Transcriptional Regulator, MerR family | chromosome | CDS | 1082945 | 366 | + | 0.620219 |
NA | Tbd_2086 | ribonuclease III | chromosome | CDS | 2178804 | 681 | - | 0.69163 |
NA | Tbd_1287 | Two component Transcriptional regulator, Winged helix family | chromosome | CDS | 1355283 | 699 | + | 0.685265 |
NA | Tbd_1892 | conserved hypothetical protein | chromosome | CDS | 1991361 | 267 | - | 0.610487 |
NA | Tbd_2354 | Two component Transcriptional regulator, Winged helix family | chromosome | CDS | 2428761 | 708 | - | 0.675141 |
NA | Tbd_2032 | Negative regulator of class I heat shock protein | chromosome | CDS | 2123146 | 1020 | + | 0.669608 |
NA | Tbd_2014 | Protein of unknown function UPF0074 | chromosome | CDS | 2104399 | 471 | - | 0.626327 |
NA | Tbd_0037 | transcription termination factor Rho | chromosome | CDS | 38806 | 1260 | + | 0.636508 |
NA | Tbd_0475 | Serine/Threonine protein kinase | chromosome | CDS | 497701 | 945 | + | 0.621164 |
NA | Tbd_0050 | Transcriptional Regulator, IclR family | chromosome | CDS | 52821 | 774 | + | 0.696382 |
NA | Tbd_0732 | RNA polymease sigma-54 factor protein | chromosome | CDS | 774818 | 1431 | - | 0.700908 |
NA | Tbd_2690 | Two Component Transcriptional Regulator, Fis family | chromosome | CDS | 2770448 | 540 | + | 0.681481 |
NA | Tbd_0231 | Response regulator receiver domain protein (CheY) | chromosome | CDS | 253043 | 765 | + | 0.679739 |
NA | Tbd_2524 | conserved hypothetical protein | chromosome | CDS | 2595958 | 504 | + | 0.678571 |
NA | Tbd_2307 | conserved hypothetical protein-putative acetyltransferase | chromosome | CDS | 2378087 | 420 | - | 0.661905 |
NA | Tbd_0533 | Sigma-54 factor transcription regulator protein | chromosome | CDS | 557855 | 1437 | - | 0.663187 |
NA | Tbd_2192 | NusB antitermination factor | chromosome | CDS | 2273647 | 438 | + | 0.639269 |
NA | Tbd_0997 | helicase c2 | chromosome | CDS | 1064266 | 1932 | + | 0.677019 |
NA | Tbd_2670 | Metal dependent phosphohydrolase, HD region | chromosome | CDS | 2743877 | 1035 | + | 0.676328 |
NA | Tbd_1758 | GTP diphosphokinase, RelA/SpoT protein | chromosome | CDS | 1848989 | 2169 | - | 0.68142 |
NA | Tbd_0469 | ATP-dependent DNA helicase RecG | chromosome | CDS | 491230 | 2037 | - | 0.703485 |
NA | Tbd_2822 | Possible Transcriptional Regulator | chromosome | CDS | 2904045 | 297 | - | 0.552189 |
NA | Tbd_1347 | transcriptional regulator | chromosome | CDS | 1427663 | 438 | - | 0.666667 |
NA | Tbd_0679 | Possible Cold-shock DNA-binding domain protein | chromosome | CDS | 720925 | 207 | + | 0.545894 |
NA | Tbd_0813 | putative acetyltransferase | chromosome | CDS | 854399 | 486 | - | 0.691358 |
NA | Tbd_2395 | Putative Transcriptional Regulator, ArsR family | chromosome | CDS | 2468373 | 330 | + | 0.587879 |
NA | Tbd_1351 | transcriptional regulator | chromosome | CDS | 1429518 | 441 | - | 0.673469 |
NA | Tbd_2388 | Carbamoyl-phosphate synthase L chain, ATP-binding | chromosome | CDS | 2460031 | 1971 | + | 0.623541 |
NA | Tbd_1257 | Predicted transcriptional regulator | chromosome | CDS | 1319398 | 666 | + | 0.675676 |
NA | Tbd_0855 | Possible Cold-shock DNA-binding domain protein | chromosome | CDS | 904373 | 207 | - | 0.555556 |
NA | Tbd_1942 | Serine/Threonine protein kinase | chromosome | CDS | 2035564 | 1866 | - | 0.689711 |
NA | Tbd_1749 | Two component Heavy metal response Transcriptional regulator, Winged helix family | chromosome | CDS | 1840147 | 729 | + | 0.644719 |
NA | Tbd_2323 | oxidative stress transcriptional regulator | chromosome | CDS | 2397821 | 906 | - | 0.697572 |
NA | Tbd_0461 | Putative transcriptional acitvator, Baf | chromosome | CDS | 484682 | 735 | + | 0.693878 |
NA | Tbd_0472 | RNA polymerase, omega subunit | chromosome | CDS | 495868 | 204 | - | 0.642157 |
NA | Tbd_1249 | RNA polymerase sigma-70 factor | chromosome | CDS | 1311870 | 741 | + | 0.647773 |
NA | Tbd_1275 | conserved hypothetical protein | chromosome | CDS | 1341679 | 432 | + | 0.724537 |
NA | Tbd_0670 | Two Component Transcriptional Regulator, LuxR family | chromosome | CDS | 711144 | 798 | + | 0.619048 |
NA | Tbd_2070 | Possible Transcriptional Regulator | chromosome | CDS | 2163707 | 225 | - | 0.635556 |
NA | Tbd_0074 | Possible Transcriptional Regulator, AsnC family | chromosome | CDS | 75897 | 1005 | - | 0.680597 |
NA | Tbd_1116 | transcriptional regulatory protein, LysR family | chromosome | CDS | 1172671 | 951 | - | 0.690852 |
NA | Tbd_0698 | NusA antitermination factor | chromosome | CDS | 739006 | 1479 | - | 0.647059 |
NA | Tbd_2457 | Transcriptional Regulator, Fis family | chromosome | CDS | 2528181 | 240 | + | 0.604167 |
NA | Tbd_2464 | Two Component Transcriptional Regulator, LuxR family | chromosome | CDS | 2537429 | 666 | + | 0.663664 |
NA | Tbd_2389 | Possible Transcriptional Regulator, TetR family | chromosome | CDS | 2462160 | 615 | + | 0.62439 |
NA | Tbd_0351 | Transcriptional Regulator, LuxR family | chromosome | CDS | 369849 | 777 | + | 0.602317 |
NA | Tbd_0816 | conserved hypothetical protein | chromosome | CDS | 858803 | 786 | + | 0.559796 |
NA | Tbd_1654 | Sigma-24 (FecI) | chromosome | CDS | 1737191 | 498 | - | 0.664659 |
NA | Tbd_1163 | Iron-sulphur cluster assembly transcription factor IscR | chromosome | CDS | 1217456 | 462 | + | 0.632035 |
NA | Tbd_0336 | Protein of unknown function UPF0074 | chromosome | CDS | 356158 | 465 | + | 0.615054 |
NA | Tbd_0661 | hypothetical protein | chromosome | CDS | 701770 | 546 | - | 0.692308 |
NA | Tbd_2216 | ROK family protein | chromosome | CDS | 2294222 | 990 | + | 0.70101 |
NA | Tbd_2791 | Two component Transcriptional regulator, Winged helix family | chromosome | CDS | 2871834 | 666 | + | 0.701201 |
NA | Tbd_2267 | Transcriptional Regulator, MerR family | chromosome | CDS | 2339159 | 399 | + | 0.719298 |
NA | Tbd_1255 | Possible Transcriptional Regulator, TetR family | chromosome | CDS | 1317849 | 603 | - | 0.650083 |
NA | Tbd_0520 | GreA/GreB family elongation factor | chromosome | CDS | 549958 | 564 | - | 0.679078 |
NA | Tbd_2815 | DEAD/DEAH box helicase | chromosome | CDS | 2896265 | 1602 | - | 0.698502 |
NA | Tbd_1516 | hypothetical protein | chromosome | CDS | 1603840 | 363 | - | 0.592287 |
NA | Tbd_2611 | Two component Transcriptional regulator, Winged helix family | chromosome | CDS | 2685767 | 702 | - | 0.675214 |
NA | Tbd_0608 | exoribonuclease II | chromosome | CDS | 636269 | 2277 | + | 0.647782 |
NA | Tbd_0072 | Possible Transcriptional Regulator, AsnC family | chromosome | CDS | 74957 | 501 | - | 0.704591 |
NA | Tbd_2681 | Predicted transcriptional regulator | chromosome | CDS | 2756352 | 1905 | + | 0.644619 |
NA | Tbd_1717 | transcriptional regulator | chromosome | CDS | 1803190 | 945 | - | 0.628571 |
NA | Tbd_2178 | Possible Transcriptional Regulator, TetR family | chromosome | CDS | 2262042 | 546 | - | 0.664835 |
NA | Tbd_1945 | conserved hypothetical protein | chromosome | CDS | 2038631 | 2403 | + | 0.692468 |
NA | Tbd_1588 | Two Component Transcriptional Regulator, LuxR family | chromosome | CDS | 1673561 | 648 | + | 0.637346 |
NA | Tbd_1836 | Sigma-24 (FecI) | chromosome | CDS | 1934951 | 576 | - | 0.652778 |
NA | Tbd_0345 | sigma-70 factor | chromosome | CDS | 363361 | 846 | - | 0.641844 |
NA | Tbd_0430 | DNA-directed RNA polymerase, alpha subunit | chromosome | CDS | 449718 | 981 | + | 0.637105 |
NA | Tbd_2328 | probable transcriptional regulator | chromosome | CDS | 2401857 | 852 | + | 0.672535 |
NA | Tbd_2739 | transcription regulatory protein, ArsR family | chromosome | CDS | 2820239 | 663 | - | 0.677225 |
NA | Tbd_1733 | DEAD/DEAH box helicase | chromosome | CDS | 1817343 | 1434 | - | 0.690377 |
NA | Tbd_2604 | transcriptional regulator, LysR family | chromosome | CDS | 2679919 | 906 | + | 0.698676 |
NA | Tbd_2579 | conserved hypothetical protein | chromosome | CDS | 2655467 | 558 | + | 0.636201 |
NA | Tbd_1700 | Serine/Threonine protein kinase | chromosome | CDS | 1791286 | 1278 | + | 0.654147 |
NA | Tbd_1383 | Hydrogenase accessory protein HypB | chromosome | CDS | 1461479 | 807 | + | 0.662949 |
NA | Tbd_1656 | transcription-repair coupling factor | chromosome | CDS | 1738365 | 3441 | + | 0.674513 |
NA | Tbd_0348 | Two component Transcriptional regulator, Winged helix family | chromosome | CDS | 366627 | 648 | - | 0.658951 |
NA | Tbd_2237 | Two Component Transcriptional Regulator, LuxR family | chromosome | CDS | 2315267 | 636 | - | 0.605346 |
NA | Tbd_1639 | Putative Anti-Sigma-28 factor, FlgM | chromosome | CDS | 1723810 | 297 | + | 0.643098 |
NA | Tbd_1344 | Transcriptional Regulator, XRE family | chromosome | CDS | 1425549 | 777 | - | 0.6139 |
NA | Tbd_1077 | Predicted transcriptional regulator | chromosome | CDS | 1136104 | 1347 | - | 0.457313 |
NA | Tbd_2736 | rhodanese-like protein | chromosome | CDS | 2817289 | 684 | - | 0.653509 |
NA | Tbd_2570 | Two Component Transcriptional Regulator, LuxR family | chromosome | CDS | 2643729 | 675 | + | 0.677037 |
NA | Tbd_0038 | hypothetical protein | chromosome | CDS | 40112 | 114 | + | 0.640351 |
NA | Tbd_1653 | Predicted transmembrane transcriptional regulator (anti-sigma factor) | chromosome | CDS | 1736433 | 762 | - | 0.7021 |
NA | Tbd_0066 | GreA/GreB family elongation factor | chromosome | CDS | 69293 | 417 | - | 0.690647 |
NA | Tbd_1972 | transcriptional regulatory protein GntR | chromosome | CDS | 2062238 | 1413 | - | 0.647558 |
NA | Tbd_1559 | Transcriptional antiterminator, Rof | chromosome | CDS | 1642692 | 228 | - | 0.684211 |
NA | Tbd_2575 | ribonuclease II | chromosome | CDS | 2649152 | 1860 | + | 0.659677 |
NA | Tbd_2095 | Sigma-24 (FecI) | chromosome | CDS | 2186163 | 597 | - | 0.59129 |
NA | Tbd_0471 | Metal dependent phosphohydrolase, HD region | chromosome | CDS | 493680 | 2217 | - | 0.662607 |
NA | Tbd_2301 | Transcriptional Regulator, GntR family | chromosome | CDS | 2373713 | 729 | - | 0.640604 |
NA | Tbd_2196 | conserved hypothetical protein | chromosome | CDS | 2276489 | 891 | - | 0.667789 |
NA | Tbd_2285 | Possible Transcriptional Regulator, Fis family | chromosome | CDS | 2358643 | 930 | - | 0.690323 |
NA | Tbd_1419 | Possible Transcriptional Regulator, TetR family | chromosome | CDS | 1509746 | 663 | + | 0.686275 |
NA | Tbd_2677 | Possible Transcriptional Regulator | chromosome | CDS | 2752544 | 213 | + | 0.591549 |
NA | Tbd_0838 | RNA polymerase sigma-70 factor | chromosome | CDS | 888316 | 951 | + | 0.651945 |
NA | Tbd_0136 | Two component Transcriptional regulator, Winged helix family | chromosome | CDS | 145612 | 663 | - | 0.695324 |
NA | Tbd_2786 | Two Component Transcriptional Regulator, LuxR family | chromosome | CDS | 2867097 | 633 | + | 0.63981 |
NA | Tbd_1180 | RNA polymerase sigma-70 factor | chromosome | CDS | 1240327 | 711 | + | 0.624473 |
NA | Tbd_1290 | Two Component Transcriptional Regulator, LuxR family | chromosome | CDS | 1360804 | 630 | + | 0.62381 |
NA | Tbd_0228 | Transcriptional Regulator, MarR family | chromosome | CDS | 250056 | 579 | + | 0.670121 |
NA | Tbd_0933 | DEAD/DEAH box helicase | chromosome | CDS | 988978 | 2799 | + | 0.626652 |
NA | Tbd_0216 | Two component Transcriptional regulator, Winged helix family | chromosome | CDS | 236782 | 693 | + | 0.670996 |
NA | Tbd_1399 | Two Component Transcriptional Regulator, LuxR family | chromosome | CDS | 1478925 | 660 | - | 0.645455 |
NA | Tbd_0398 | DNA-directed RNA polymerase, beta subunit | chromosome | CDS | 424459 | 4080 | + | 0.634069 |
NA | Tbd_1129 | GreA/GreB family elongation factor | chromosome | CDS | 1185577 | 477 | + | 0.649895 |
NA | Tbd_0399 | RNA polymerase I subunit A | chromosome | CDS | 428560 | 4197 | + | 0.649273 |
NA | Tbd_0482 | Possible Transcriptional Regulator, TetR family | chromosome | CDS | 503804 | 642 | + | 0.661994 |
NA | Tbd_2805 | chromosome partitioning protein ParB | chromosome | CDS | 2885635 | 855 | - | 0.705263 |
NA | Tbd_1028 | Transcriptional Regulator, MarR family | chromosome | CDS | 1094753 | 441 | + | 0.70068 |
NA | Tbd_1101 | DEAD/DEAH box helicase | chromosome | CDS | 1160123 | 1383 | + | 0.676067 |
NA | Tbd_0073 | Possible Transcriptional Regulator, AsnC family | chromosome | CDS | 75454 | 444 | - | 0.675676 |
NA | Tbd_1658 | Putative Anti-Sigma-28 factor, FlgM | chromosome | CDS | 1743124 | 309 | + | 0.656958 |
NA | Tbd_0393 | NusG antitermination factor | chromosome | CDS | 421199 | 564 | + | 0.617021 |
NA | Tbd_2275 | hypothetical protein | chromosome | CDS | 2346487 | 2709 | - | 0.613511 |
NA | Tbd_2166 | Protein of unknown function DUF193 | chromosome | CDS | 2251542 | 477 | + | 0.662474 |
cbbR1 | Tbd_2625 | transcriptional regulator | chromosome | CDS | 2697966 | 942 | + | 0.657113 |
cbbR2 | Tbd_2639 | transcriptional regulator | chromosome | CDS | 2714438 | 909 | + | 0.667767 |
cbbR3 | Tbd_2651 | transcriptional regulator | chromosome | CDS | 2724791 | 951 | + | 0.648791 |