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2024-05-11 22:45:20

Gene list

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COG category: Transcription
Genomic element: chromosome

Number of genes found: 167

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Staphylococcus aureus RF122, RF122
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA SAB1256c probable transcriptional regulatorchromosome CDS1372614 618 - 0.313916
NA SAB1635 probable DNA-binding proteinchromosome CDS1781585 486 + 0.286008
NA SAB1397c probable N utilization substance protein Bchromosome CDS1520565 390 - 0.302564
NA SAB2394c transcriptional regulator MarR familychromosome CDS2531034 435 - 0.358621
NA SAB0472 probable transcriptional repressor of stress geneschromosome CDS529172 462 + 0.316017
NA SAB0608 two-component response regulatorchromosome CDS673568 675 + 0.302222
NA SAB1870c GntR family transcriptional regulatorchromosome CDS2005393 381 - 0.322835
NA SAB0324c hypothetical proteinchromosome CDS371622 264 - 0.280303
NA SAB2427 conserved hypothetical protein TetR familychromosome CDS2566085 549 + 0.29326
NA SAB0035 hypothetical proteinchromosome CDS45864 297 + 0.313131
NA SAB2037 probable transcription antiterminatorchromosome CDS2170064 2133 + 0.330989
NA SAB2416c probable transcriptional regulator LysR familychromosome CDS2551743 885 - 0.334463
NA SAB1781c probable two-component response regulator proteinchromosome CDS1908056 624 - 0.315705
NA SAB2585c conserved hypothetical proteinchromosome CDS2736640 840 - 0.352381
NA SAB0607 hypothetical proteinchromosome CDS672629 924 + 0.313853
NA SAB0311 conserved hypothetical proteinchromosome CDS362354 846 + 0.34279
NA SAB1367 probable transcriptional regulator AraC familychromosome CDS1494975 867 + 0.336794
NA SAB2445 regulatory protein TetR familychromosome CDS2588130 570 + 0.326316
NA SAB2081c probable MerR family transcriptional regulatorchromosome CDS2229607 267 - 0.303371
NA SAB0417 hypothetical proteinchromosome CDS453929 486 + 0.355967
NA SAB1214 transcription antiterminatorchromosome CDS1326571 852 + 0.274648
NA SAB0133 probable transcriptional regulator RpiR familychromosome CDS165765 876 + 0.342466
NA SAB2249c probable transcriptional regulatorchromosome CDS2379394 516 - 0.317829
NA SAB1097 Ribonuclease IIIchromosome CDS1183625 732 + 0.340164
NA SAB2251c conserved hypothetical proteinchromosome CDS2381146 402 - 0.368159
NA SAB2201 transcriptional regulatorchromosome CDS2330576 765 + 0.299346
NA SAB2192 probable transcriptional regulatorchromosome CDS2322394 873 + 0.293242
NA SAB2169c hypothetical proteinchromosome CDS2299278 744 - 0.278226
NA SAB0621 transcriptional regulator LysR familychromosome CDS688654 867 + 0.326413
NA SAB1173 hypothetical proteinchromosome CDS1278611 201 + 0.268657
NA SAB2269 probable regulatory proteinchromosome CDS2399347 741 + 0.273954
NA SAB1563c probable DNA-binding proteinchromosome CDS1693068 1299 - 0.337952
NA SAB1780c DNA-binding proteinchromosome CDS1907236 465 - 0.31828
NA SAB1139 probable GntR family transcriptional regulatorchromosome CDS1238100 714 + 0.315126
NA SAB2380c probable transcriptional regulator MerR familychromosome CDS2515817 765 - 0.346405
NA SAB2233 regulatory protein TetR familychromosome CDS2362104 555 + 0.286486
NA SAB0348 bovine pathogenicity island protein Orf17chromosome CDS391887 384 + 0.304688
NA SAB2242 conserved hypothetical proteinchromosome CDS2371890 444 + 0.281532
NA SAB0922c probable exported proteinchromosome CDS1000818 1227 - 0.324368
NA SAB0211c probable ribose transcriptional repressor LacI familychromosome CDS259821 999 - 0.372372
NA SAB1218 peptide methionine sulfoxide reductase regulatorchromosome CDS1332618 984 + 0.33435
NA SAB0276 conserved hypothetical proteinchromosome CDS327888 948 + 0.379747
NA SAB2139c hypothetical proteinchromosome CDS2275624 351 - 0.293447
NA SAB2265 probable transcriptional regulator MarR familychromosome CDS2395729 447 + 0.286353
NA SAB1836c probable transcriptional regulatorchromosome CDS1971358 354 - 0.29096
NA SAB2536c probable acetyltransferasechromosome CDS2692910 501 - 0.329341
NA SAB1074 probable DNA-directed RNA polymerase omega chainchromosome CDS1159258 219 + 0.328767
NA SAB1545c conserved hypothetical UPF0168 proteinchromosome CDS1666316 471 - 0.354565
NA SAB0047 probable transcriptional regulatorchromosome CDS61429 1398 + 0.298283
NA SAB2209 truncated hypothetical proteinchromosome CDS2340351 642 + 0.311526
NA SAB2189 probable regulatory protein DeoR familychromosome CDS2320117 693 + 0.313131
NA SAB0758c hypothetical proteinchromosome CDS830959 495 - 0.29697
NA SAB0635c probable transcriptional regulator MarR familychromosome CDS700739 444 - 0.328829
NA SAB1910c SaPI1 Orf21chromosome CDS2036086 189 - 0.312169
NA SAB0358 bovine pathogenicity island protein Orf6chromosome CDS398688 342 + 0.30117
NA SAB2468c hypothetical proteinchromosome CDS2604412 588 - 0.302721
NA SAB1297 conserved hypothetical proteinchromosome CDS1419659 420 + 0.269048
NA SAB2568c conserved hypothetical proteinchromosome CDS2722889 345 - 0.333333
NA SAB0606c conserved hypothetical proteinchromosome CDS672010 507 - 0.339251
NA SAB2270c two-component response regulatorchromosome CDS2400344 654 - 0.33792
NA SAB2282c conserved hypothetical proteinchromosome CDS2414048 549 - 0.369763
NA SAB2137 hypothetical proteinchromosome CDS2273884 441 + 0.310658
NA SAB0254c probable transcription regulatorchromosome CDS306460 801 - 0.334582
NA SAB0484 RNA polymerase sigma factorchromosome CDS542860 570 + 0.280702
NA SAB1757 probable transcriptional repressorchromosome CDS1884309 669 + 0.315396
NA SAB1040c conserved hypothetical proteinchromosome CDS1120882 441 - 0.324263
NA SAB2503c probable MarR family transcriptional regulatorchromosome CDS2645055 456 - 0.317982
NA SAB0964 probable transcriptional regulatorchromosome CDS1045183 540 + 0.3
NA SAB2260 hypothetical proteinchromosome CDS2390068 2106 + 0.286325
NA SAB2452 hypothetical proteinchromosome CDS2591644 558 + 0.295699
NA SAB0344 bovine pathogenicity island protein Orf19chromosome CDS390962 228 + 0.276316
NA SAB2170c probable transcriptional regulatorchromosome CDS2300047 1956 - 0.280675
NA SAB1965c ATP-dependent RNA helicasechromosome CDS2100100 1521 - 0.364892
NA SAB0647 transcriptional repressor of fructose operonchromosome CDS711571 762 + 0.318898
NA SAB0387 probable exported proteinchromosome CDS424252 1509 + 0.313453
NA SAB1072c probable fibronectin/fibrinogen-binding proteinchromosome CDS1156663 1698 - 0.319788
NA SAB1129 conserved hypothetical proteinchromosome CDS1225180 285 + 0.308772
NA SAB2500c probable two-component sensor response regulatorchromosome CDS2642259 666 - 0.298799
NA SAB2083c probable transcriptional regulatorchromosome CDS2232866 930 - 0.254839
NA SAB2488 conserved hypothetical proteinchromosome CDS2626270 585 + 0.355556
NA SAB2078 probable regulatory proteinchromosome CDS2226277 732 + 0.367486
NA SAB2187c probable transcriptional regulatorchromosome CDS2317855 948 - 0.345992
NA SAB1274c conserved hypothetical proteinchromosome CDS1392199 510 - 0.335294
NA SAB0844c probable regulatory protein LysR familychromosome CDS917380 870 - 0.272414
NA SAB1954c hypothetical proteinchromosome CDS2087254 171 - 0.333333
NA SAB1895c hypothetical mobile element-associated proteinchromosome CDS2028146 342 - 0.298246
NA SAB0283 probable regulatory protein MarR familychromosome CDS334241 420 + 0.335714
NA SAB0625 hypothetical proteinchromosome CDS692274 444 + 0.297297
NA SAB2255 conserved hypothetical proteinchromosome CDS2384873 624 + 0.309295
NA SAB1816c two-component response regulatorchromosome CDS1950864 630 - 0.338095
NA SAB2007c conserved hypothetical proteinchromosome CDS2138085 339 - 0.353982
NA SAB2013c conserved hypothetical proteinchromosome CDS2144530 861 - 0.329849
NA SAB2240 two-component response regulatorchromosome CDS2369688 675 + 0.352593
NA SAB1948c conserved hypothetical proteinchromosome CDS2081290 2151 - 0.333798
NA SAB0343c bovine pathogenicity island protein Orf20chromosome CDS390060 786 - 0.279898
NA SAB0617 hypothetical proteinchromosome CDS685737 426 + 0.251174
NA SAB1496c conserved hypothetical proteinchromosome CDS1612157 423 - 0.34279
NA SAB0299 probable DNA-binding proteinchromosome CDS348866 204 + 0.392157
NA SAB0203c probable transcriptional regulator GntR familychromosome CDS252721 705 - 0.331915
NA SAB1750c hypothetical proteinchromosome CDS1880822 315 - 0.298413
NA SAB0074c probable transcriptional regulatorchromosome CDS93531 741 - 0.352227
NA SAB2582c probable membrane proteinchromosome CDS2734678 570 - 0.322807
NA SAB2442c acetyltransferasechromosome CDS2584592 489 - 0.245399
NA SAB0907 conserved hypothetical proteinchromosome CDS982855 552 + 0.324275
NA SAB1430c probable ATP-dependent RNA helicasechromosome CDS1547189 1347 - 0.325909
NA SAB0452 transcription-repair coupling factorchromosome CDS497876 3507 + 0.341603
NA SAB0920c probable acetyltransferase family proteinchromosome CDS999711 435 - 0.351724
NA SAB2496c hypothetical proteinchromosome CDS2637087 261 - 0.318008
NA SAB0353 bovine pathogenicity island protein Orf11chromosome CDS395952 642 + 0.350467
NA SAB0545c probable DNA-binding proteinchromosome CDS609635 441 - 0.321995
NA SAB0425 probable trehalose operon transcriptional repressorchromosome CDS467652 708 + 0.337571
NA SAB0468c transcriptional regulator of GntR familychromosome CDS524654 1383 - 0.293565
NA SAB0554 conserved hypothetical proteinchromosome CDS618243 477 + 0.314465
NA SAB0253 probable kinasechromosome CDS305281 903 + 0.366556
NA SAB0063 hypothetical proteinchromosome CDS82220 765 + 0.373856
NA SAB0420c transcriptional activator of glutamate synthase operonchromosome CDS456595 885 - 0.324294
NA SAB0891c probable transcription factorchromosome CDS969737 570 - 0.303509
agrA SAB1923 accessory gene regulator Achromosome CDS2047633 717 + 0.313808
agrB SAB1920 accessory gene regulator Bchromosome CDS2045592 564 + 0.255319
argR SAB2511c arginine repressorchromosome CDS2655472 450 - 0.295556
argR SAB1393c arginine repressorchromosome CDS1517246 453 - 0.300221
arlR SAB1271c two-component response regulatorchromosome CDS1388742 660 - 0.325758
arsR SAB1630 arsenical resistance operon repressorchromosome CDS1777627 315 + 0.307937
ccpA SAB1596c catabolite control protein Achromosome CDS1732055 990 - 0.332323
codY SAB1117 GTP-sensing transcriptional pleiotropic repressorchromosome CDS1209102 774 + 0.320413
cspA SAB1258c cold shock proteinchromosome CDS1373964 201 - 0.378109
cspB SAB2581 cold shock proteinchromosome CDS2734351 201 + 0.383085
cspC SAB0749 cold-shock protein Cchromosome CDS825949 201 + 0.39801
czrA SAB2029 zinc and cobalt transport repressor proteinchromosome CDS2160893 321 + 0.342679
dinG SAB1319c probable ATP-dependent DNA helicasechromosome CDS1446123 2694 - 0.301039
dinR SAB1197c DNA damage SOS regulatory repressor proteinchromosome CDS1303125 624 - 0.362179
gapR SAB0727 glycolytic operon regulatorchromosome CDS799532 1014 + 0.376726
glkA SAB1419c glucokinasechromosome CDS1537353 987 - 0.346505
glnR SAB1171 glutamine synthetase transcription repressorchromosome CDS1273563 369 + 0.325203
glpP SAB1159 glycerol uptake operon antiterminator regulatory proteinchromosome CDS1260956 534 + 0.297753
gntR SAB2379c gluconate operon transcription repressorchromosome CDS2514984 681 - 0.35536
greA SAB1481c transcription elongation factorchromosome CDS1595986 477 - 0.333333
hrcA SAB1454c heat-inducible transcription repressorchromosome CDS1571231 978 - 0.288344
icaR SAB2540c ica operon transcription regulatorchromosome CDS2696628 561 - 0.27451
kdpE SAB1964 two component sensor proteinchromosome CDS2099054 696 + 0.323276
lacR SAB2077c lactose phosphotransferase system repressorchromosome CDS2225271 756 - 0.337302
lytR SAB0200 two-component sensor histidine kinasechromosome CDS250623 741 + 0.31309
malR SAB1369c maltose operon transcription repressorchromosome CDS1497589 1020 - 0.319608
mntR SAB0584 iron dependent repressorchromosome CDS648689 645 + 0.306977
nusA SAB1128 transcription termination-antitermination factorchromosome CDS1223984 1176 + 0.358844
nusG SAB0487 transcription antitermination proteinchromosome CDS543938 549 + 0.355191
phoP SAB1552c alkaline phosphatase synthesis transcriptional regulatory proteinchromosome CDS1676289 705 - 0.339007
recG SAB1091 ATP-dependent DNA helicasechromosome CDS1177607 2061 + 0.340611
relA SAB1503c GTP pyrophosphokinasechromosome CDS1620174 2211 - 0.344188
rho SAB2005c transcription termination factorchromosome CDS2134856 1317 - 0.356112
rnr SAB0736 ribonuclease Rchromosome CDS808775 2373 + 0.348925
rot SAB1622c repressor of toxins transcriptional regulatorchromosome CDS1768614 501 - 0.319361
rpoA SAB2097c DNA-directed RNA polymerase alpha chainchromosome CDS2245079 945 - 0.337566
rpoB SAB0493 DNA-dependent RNA polymerase beta subunitchromosome CDS548167 3552 + 0.377252
rpoC SAB0494 DNA-directed RNA polymerase beta' subunitchromosome CDS551855 3624 + 0.361479
rpoD SAB1433c RNA polymerase sigma factorchromosome CDS1550560 1107 - 0.338753
rpoE SAB2012c probable DNA-directed RNA polymerase delta subunitchromosome CDS2143888 531 - 0.312618
rsbU SAB1952c indirect positive regulator of sigma Bchromosome CDS2085545 1002 - 0.314371
saeR SAB0655c response regulatorchromosome CDS721582 687 - 0.326055
sarA SAB0569c staphylococcal accessory regulator Achromosome CDS633329 375 - 0.274667
sarS SAB0051c transcriptional regulator SarSchromosome CDS67420 753 - 0.2749
scrR SAB1926c sucrose operon repressorchromosome CDS2051305 951 - 0.319664
sigB SAB1949c RNA polymerase sigma factor Bchromosome CDS2083874 771 - 0.345006
tcaR SAB2236c bicyclomycin resistance transcriptional regulatorchromosome CDS2365983 456 - 0.287281
tenA SAB1978c probable transcriptional activatorchromosome CDS2113330 690 - 0.32029
ureG SAB2165 urease accessory proteinchromosome CDS2296474 615 + 0.344715
yycF SAB0018 two-component response regulatorchromosome CDS25153 708 + 0.362994