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2024-05-13 22:11:21

Gene list

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COG category: Transcription
Genomic element: pSymA

Number of genes found: 131

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Sinorhizobium meliloti, 1021
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA SMa2151 probable DNA-binding proteinpSymA CDS1215193 432 + 0.56713
NA SMa0307 putative LysR-type regulatorpSymA CDS172016 987 - 0.575481
NA SMa1654 putative GntR-family transcriptional regulatorpSymA CDS924741 699 + 0.58083
NA SMa2008 Putative transcriptional regulatorpSymA CDS1137545 606 - 0.643564
NA SMa0232 hypothetical proteinpSymA CDS128613 666 + 0.615616
NA SMa0824 hypothetical proteinpSymA CDS452858 468 + 0.621795
NA SMa2014 Putative transcriptional regulatorpSymA CDS1141504 438 - 0.586758
NA SMa1056 Putative transcriptional regulatorpSymA CDS577474 348 - 0.609195
NA SMa1954 Putative LysR-family transcriptional regulatorpSymA CDS1109860 984 + 0.601626
NA SMa0594 hypothetical proteinpSymA CDS316428 1032 + 0.589147
NA SMa2027 Putative LysR-family transcriptional regulatorpSymA CDS1147165 894 - 0.637584
NA SMa1956 Putative LysR-family transcriptional regulatorpSymA CDS1111325 933 - 0.62701
NA SMa0144 hypothetical proteinpSymA CDS79504 786 + 0.648855
NA SMa2245 conserved hypothetical proteinpSymA CDS1257344 2538 - 0.499212
NA SMa0281 putative regulator, MerR familypSymA CDS158400 405 + 0.592593
NA SMa1933 Putative transcriptional activatorpSymA CDS1098786 615 - 0.661789
NA SMa0303 putative LysR type regulatorpSymA CDS169064 879 + 0.623436
NA SMa0985 putative LysR-family transcriptional regulatorpSymA CDS547525 762 - 0.607612
NA SMa1759 putative GntR-family transcriptional regulatorpSymA CDS999887 681 - 0.628488
NA SMa0520 conserved hypothetical proteinpSymA CDS280693 843 + 0.608541
NA SMa1823 Hypothetical proteinpSymA CDS1034405 909 - 0.567657
NA SMa0063 putative GntR-family transcriptional regulatorpSymA CDS33372 816 + 0.609069
NA SMa0149 hypothetical proteinpSymA CDS81858 483 + 0.590062
NA SMa1882 Putative transcriptional activatorpSymA CDS1069239 660 - 0.592424
NA SMa1987 Putative LysR-family transcriptional regulatorpSymA CDS1127616 840 + 0.652381
NA SMa0372 putative LysR-type regulatorpSymA CDS199105 900 - 0.602222
NA SMa2325 probable transcriptional regulatorpSymA CDS1296390 693 - 0.649351
NA SMa0789 hypothetical proteinpSymA CDS429807 330 + 0.572727
NA SMa1893 Putative LysR-family transcriptional activatorpSymA CDS1075895 876 + 0.630137
NA SMa0969 putative response regulator of two-component systempSymA CDS540997 750 + 0.556
NA SMa1442 Putative GntR-family transcription factorpSymA CDS795334 765 - 0.640523
NA SMa1454 Putative transcription factorpSymA CDS801272 1071 + 0.634921
NA SMa1943 Putative transcriptional regulatorpSymA CDS1103712 456 - 0.657895
NA SMa0717 putative calcium binding transcriptional regulatory proteinpSymA CDS389265 1710 + 0.654386
NA SMa1900 Hypothetical proteinpSymA CDS1079608 558 + 0.586021
NA SMa1632 putative LysR-family transcriptional regulatorpSymA CDS907961 954 + 0.580713
NA SMa0222 putative GntR-family transcriptional regulatorpSymA CDS122050 729 + 0.615912
NA SMa1720 putative LysR-family transcriptional regulatorpSymA CDS970632 945 + 0.595767
NA SMa1323 Hypothetical proteinpSymA CDS721436 369 + 0.547425
NA SMa1349 Putative GntR-family transcriptional regulatorpSymA CDS738144 693 - 0.608947
NA SMa2275 hypothetical proteinpSymA CDS1268802 276 - 0.561594
NA SMa1828 Putative transcriptional activatorpSymA CDS1036363 1152 - 0.598958
NA SMa1253 Hypothetical proteinpSymA CDS686450 270 + 0.577778
NA SMa1835 Hypothetical proteinpSymA CDS1041083 846 - 0.618203
NA SMa0097 putative transcriptional regulatorpSymA CDS50138 942 - 0.660297
NA SMa0078 putative LacI-family transcriptional regulatorpSymA CDS40959 1023 + 0.624633
NA SMa0535 hypothetical proteinpSymA CDS287402 174 - 0.626437
NA SMa0206 putative two-component response regulatorpSymA CDS113822 723 + 0.603043
NA SMa2341 putative LysR-family transcriptional regulatorpSymA CDS1319298 876 - 0.626712
NA SMa0021 hypothetical proteinpSymA CDS14450 645 - 0.55969
NA SMa2269 hypothetical proteinpSymA CDS1267896 267 + 0.595506
NA SMa1966 Putative LysR-family transcriptional regulatorpSymA CDS1118218 1110 - 0.601802
NA SMa0190 hypothetical proteinpSymA CDS104560 630 + 0.579365
NA SMa0179 putative transcriptional activatorpSymA CDS98400 918 - 0.624183
NA SMa1960 Conserved hypothetical proteinpSymA CDS1114922 378 + 0.608466
NA SMa1550 putative response regulator of two-component systempSymA CDS857628 684 + 0.602339
NA SMa1505 Putative GntR-family transcriptional regulatorpSymA CDS830383 786 + 0.645038
NA SMa0065 putative GntR-family transcriptional regulatorpSymA CDS35455 693 + 0.643579
NA SMa1853 Hypothetical proteinpSymA CDS1051670 852 + 0.66784
NA SMa1726 putative transcriptional regulatorpSymA CDS973914 657 - 0.570776
NA SMa1625 putative LysR-family transcriptional regulatorpSymA CDS904985 924 - 0.630952
NA SMa2107 probable GstR transcriptional regulatorpSymA CDS1189053 906 - 0.559603
NA SMa0557 LysR family transcriptional regulator, probablepSymA CDS295587 888 - 0.621622
NA SMa2287 putative LysR-family transcriptional regulatorpSymA CDS1271938 948 - 0.661392
NA SMa2049 putative LacI-family transcription regulatorpSymA CDS1158529 1083 + 0.633426
NA SMa0160 putative GntR-family transcription regulatorpSymA CDS88416 675 + 0.604444
NA SMa1176 Hypothetical proteinpSymA CDS643876 585 - 0.591453
NA SMa2167 hypothetical proteinpSymA CDS1221480 468 + 0.557692
NA SMa0649 conserved domain of hypothetical proteinpSymA CDS346459 201 + 0.616915
NA SMa1139 Truncated response regulator receiver domainpSymA CDS620850 267 - 0.588015
NA SMa0062 putative GntR-family transcriptional regulatorpSymA CDS32634 690 + 0.643478
NA SMa1299 Conserved hypothetical proteinpSymA CDS709054 612 + 0.604575
NA SMa1428 putative TetR/AcrR-family transcriptional regulatorpSymA CDS786798 660 + 0.562121
NA SMa1825 Hypothetical proteinpSymA CDS1035458 909 - 0.594059
NA SMa2215 putative GntR-family transcriptional regulatorpSymA CDS1240820 768 + 0.615885
NA SMa2163 hypothetical proteinpSymA CDS1218761 729 + 0.59808
NA SMa1413 Hypothetical proteinpSymA CDS777118 276 - 0.576087
NA SMa2004 putative ROK-family transcriptional regulatorpSymA CDS1136007 1074 + 0.630354
NA SMa2387 hypothetical proteinpSymA CDS1348415 657 + 0.601218
NA SMa2020 putative transcription regulatorpSymA CDS1143618 468 - 0.58547
NA SMa2133 hypothetical proteinpSymA CDS1205622 792 - 0.568182
NA SMa1736 putative LysR-family transcriptional regulatorpSymA CDS981384 882 - 0.586168
NA SMa1725 putative AraC-family transcriptional regulatorpSymA CDS973132 639 + 0.56964
NA SMa0229 hypothetical proteinpSymA CDS128085 423 + 0.605201
NA SMa0319 putative AraC-type regulatorpSymA CDS177973 1002 + 0.595808
NA SMa0347 putative LysR-type regulatorpSymA CDS188006 888 + 0.620495
NA SMa1076 Hypothetical proteinpSymA CDS587855 459 - 0.566449
NA SMa0961 putative response regulator of two-component systempSymA CDS538682 723 + 0.578147
NA SMa0126 putative cold shock proteinpSymA CDS68805 210 + 0.566667
NA SMa1822 Hypothetical proteinpSymA CDS1033278 1095 - 0.595434
NA SMa2227 Putative histidine utilization repressor proteinpSymA CDS1247113 948 - 0.552743
NA SMa0039 probable LysR-family proteinpSymA CDS23398 942 - 0.623142
NA SMa0246 putative GntR-family transcriptional regulatorpSymA CDS136418 702 + 0.615385
NA SMa0310 putative LysR-type transcriptional regulatorpSymA CDS174273 732 - 0.601093
NA SMa1480 Probable LysR-type activatorpSymA CDS813928 975 + 0.605128
NA SMa1602 putative LysR-family transcriptional regulatorpSymA CDS893872 909 - 0.592959
NA SMa1887 Putative transcriptional regulatorpSymA CDS1074259 603 + 0.641791
NA SMa2147 hypothetical proteinpSymA CDS1213698 891 - 0.567901
NA SMa1782 Putative LysR-family transcriptional regulatorpSymA CDS1009854 894 + 0.616331
NA SMa1867 Putative AsnC (lrp)-family transcriptional activatorpSymA CDS1060211 477 - 0.555556
NA SMa0498 putative LysR-type regulatorpSymA CDS271057 900 - 0.593333
NA SMa0193 hypothetical proteinpSymA CDS106326 267 - 0.588015
NA SMa1979 Putative LysR-family transcriptional regulatorpSymA CDS1124993 873 + 0.607102
NA SMa1660 putative acetyltransferasepSymA CDS926871 585 - 0.635897
NA SMa0353 putative LysR-type regulatorpSymA CDS190833 915 + 0.608743
NA SMa2293 probable beta lactamase transcriptional activatorpSymA CDS1274593 885 - 0.60678
NA SMa1493 Putative LysR-type transcription factorpSymA CDS822713 924 + 0.601732
NA SMa2303 putative ROK family transcriptional regulatorpSymA CDS1283423 1227 - 0.624287
NA SMa0267 putative GntR-family regulatorpSymA CDS150483 693 + 0.623377
NA SMa1387 Putative LysR-type transcriptional regulatorpSymA CDS764198 915 + 0.618579
NA SMa1749 putative transcriptional regulatorpSymA CDS991460 900 - 0.568889
NA SMa0355 putative LysR-type regulatorpSymA CDS191811 606 + 0.572607
NA SMa0402 putative GntR-type regulatorpSymA CDS217871 732 + 0.618852
NA SMa0750 probable LysR-family transcriptional activatorpSymA CDS403178 879 - 0.584755
NA SMa2015 Putative transcriptional regulatorpSymA CDS1141886 522 - 0.60728
NA SMa1476 Putative AraC-family transcription regulatorpSymA CDS811255 993 - 0.63142
NA SMa1138 Truncated response regulatorpSymA CDS620365 492 - 0.587398
NA SMa2381 hypothetical proteinpSymA CDS1344998 474 + 0.594937
NA SMa0223 putative transcriptional regulatorpSymA CDS122852 615 - 0.630894
atrA SMa0955 AtrA transcriptional regulatorpSymA CDS534018 693 + 0.574315
cspA5 SMa0181 probable CspA5 cold shock protein transcriptional regulatorpSymA CDS100505 204 - 0.509804
cspA6 SMa0738 probable CspA6 cold shock protein transcriptional regulatorpSymA CDS396650 204 - 0.544118
hmrR SMa1014 HmrR heavy metal dependent transcriptional regulatorpSymA CDS563252 417 + 0.609113
nifA SMa0815 NifA transcriptional activatorpSymA CDS445895 1572 - 0.556616
nodD1 SMa0870 NodD1 transcription regulatorpSymA CDS481810 927 + 0.555556
nodD2 SMa0757 NodD2 nod box-dependent transcription activatorpSymA CDS409254 933 + 0.572347
nodD3 SMa0840 NodD3 transcriptional regulatorpSymA CDS462751 942 - 0.557325
repB2 SMa2393 RepB2 replication proteinpSymA CDS1351362 1014 - 0.574951
rhrA SMa2412 RhrA transcriptional activatorpSymA CDS1314632 945 - 0.583069
rpoE6 SMa0143 putative RpoE6 RNA polymerase sigma factorpSymA CDS78902 606 + 0.605611
syrM SMa0849 SyrM transcriptional regulatorpSymA CDS466418 981 + 0.61366