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2024-05-18 21:33:09

Gene list

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COG category: Transcription
Genomic element: chromosome 2

Number of genes found: 182

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Photobacterium profundum, ss9
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA PBPRB0492 hypothetical proteinchromosome 2 CDS574288 597 + 0.435511
NA PBPRB1013 hypothetical proteinchromosome 2 CDS1154936 981 + 0.412844
NA PBPRB1248 hypothetical Transcriptional regulator, MarR familychromosome 2 CDS1394441 435 - 0.383908
NA PBPRB0459 hypothetical transcriptional regulatorchromosome 2 CDS535409 885 - 0.425989
NA PBPRB0042 hypothetical transcriptional regulatorchromosome 2 CDS54129 609 - 0.369458
NA PBPRB2003 putative transcriptional regulatorchromosome 2 CDS2207220 975 - 0.411282
NA PBPRB0857 hypothetical proteinchromosome 2 CDS988369 1302 - 0.345622
NA PBPRB0101 hypothetical proteinchromosome 2 CDS123789 744 - 0.397849
NA PBPRB0215 hypothetical proteinchromosome 2 CDS240236 561 + 0.365419
NA PBPRB0342 hypothetical proteinchromosome 2 CDS389531 426 - 0.384977
NA PBPRB1794 hypothetical proteinchromosome 2 CDS1960275 885 - 0.388701
NA PBPRB1369 conserved hypothetical proteinchromosome 2 CDS1523929 573 + 0.363002
NA PBPRB0564 hypothetical proteinchromosome 2 CDS656906 282 + 0.393617
NA PBPRB1669 Hypothetical transcriptional regulatorchromosome 2 CDS1812314 696 - 0.425287
NA PBPRB1080 hypothetical proteinchromosome 2 CDS1227376 528 - 0.409091
NA PBPRB0251 hypothetical RNA polymerase ECF-type sigma factorchromosome 2 CDS285039 543 + 0.38674
NA PBPRB1295 hypothetical proteinchromosome 2 CDS1438593 444 - 0.34009
NA PBPRB1919 hypothetical transcriptional regulatorchromosome 2 CDS2113285 624 + 0.405449
NA PBPRB1583 Hypothetical DNA-binding HTH domain-containing proteinchromosome 2 CDS1728959 579 - 0.421416
NA PBPRB0673 hypothetical proteinchromosome 2 CDS796543 1290 - 0.354264
NA PBPRB1690 hypothetical proteinchromosome 2 CDS1837721 798 - 0.383459
NA PBPRB1303 hypothetical proteinchromosome 2 CDS1445115 798 - 0.382206
NA PBPRB1698 hypothetical acetyltransferase GNAT familychromosome 2 CDS1846268 507 - 0.368836
NA PBPRB1977 hypothetical proteinchromosome 2 CDS2174012 1353 - 0.40133
NA PBPRB0338 hypothetical proteinchromosome 2 CDS386980 744 + 0.41129
NA PBPRB1648 hypothetical transcriptional regulatorchromosome 2 CDS1795208 879 - 0.43686
NA PBPRB1061 hypothetical proteinchromosome 2 CDS1206371 435 - 0.388506
NA PBPRB0045 hypothetical proteinchromosome 2 CDS56801 942 - 0.474522
NA PBPRB1563 Hypothetical transcription regulatorchromosome 2 CDS1714434 1005 + 0.378109
NA PBPRB1591 Hypothetical proteinchromosome 2 CDS1739451 1122 + 0.361854
NA PBPRB0384 hypothetical proteinchromosome 2 CDS439893 324 + 0.37037
NA PBPRB0426 putative exoribonuclease IIchromosome 2 CDS495692 2103 - 0.419876
NA PBPRB1526 Hypothetical transcriptional regulatorchromosome 2 CDS1676730 753 + 0.39575
NA PBPRB1969 hypothetical proteinchromosome 2 CDS2166933 309 - 0.391586
NA PBPRB0322 hypothetical proteinchromosome 2 CDS367104 1374 - 0.438865
NA PBPRB0169 Hypothetical proteinchromosome 2 CDS190367 894 + 0.44519
NA PBPRB0725 hypothetical proteinchromosome 2 CDS853145 879 + 0.379977
NA PBPRB0224 hypothetical proteinchromosome 2 CDS252840 885 - 0.39548
ACT PBPRB1899 hypothetical proteinchromosome 2 CDS2089371 903 + 0.467331
AGR_L_32 PBPRB1636 hypothetical transcriptional regulatorchromosome 2 CDS1781278 948 + 0.414557
AGR_PAT_ PBPRB0010 putative transcriptional regulator, AraC/XylS familychromosome 2 CDS14899 795 - 0.403774
ALL7175 PBPRB1495 hypothetical proteinchromosome 2 CDS1650230 399 + 0.388471
ATU0034 PBPRB0758 putative DNA-binding response regulatorchromosome 2 CDS887161 789 - 0.415716
ATU2187 PBPRB1643 hypothetical transcriptional regulator, ArsR familychromosome 2 CDS1791024 345 + 0.4
ATU4514 PBPRB0467 Putative transcriptional regulatorchromosome 2 CDS545810 843 + 0.427046
ATU4514 PBPRB0471 hypothetical transcriptional regulatorchromosome 2 CDS550153 834 - 0.443645
BB1351 PBPRB0234 putative transcriptional regulator, GntR familychromosome 2 CDS265727 744 + 0.456989
BC2051 PBPRB1935 hypothetical acetyltransferasechromosome 2 CDS2126970 474 - 0.381857
BH1582 PBPRB0044 hypothetical proteinchromosome 2 CDS56111 429 + 0.403263
BLR7198 PBPRB0770 hypothetical proteinchromosome 2 CDS901708 948 + 0.419831
BPP1563 PBPRB1422 putative transcriptional regulatorchromosome 2 CDS1579658 576 - 0.428819
BPP3536 PBPRB2012 hypothetical transcriptional regulatorchromosome 2 CDS2218309 903 + 0.41196
BR0234 PBPRB1727 hypothetical transcriptional regulatorchromosome 2 CDS1879920 675 - 0.343704
BT2546 PBPRB1382 putative transcriptional regulatorchromosome 2 CDS1540116 225 + 0.377778
C3863 PBPRB0921 hypothetical transcriptional regulatorchromosome 2 CDS1061492 894 + 0.410515
CC1117 PBPRB1130 hypothetical proteinchromosome 2 CDS1276956 867 + 0.422145
CP0059 PBPRB0879 putative acetyltransferasechromosome 2 CDS1015210 498 - 0.401606
CREB PBPRB0905 putative transcriptional regulatorchromosome 2 CDS1046599 699 + 0.403433
CV0696 PBPRB1891 hypothetical transcriptional regulatorchromosome 2 CDS2074797 921 + 0.449511
CV1435 PBPRB0281 putative transcriptional regulatorchromosome 2 CDS323941 927 - 0.393743
CV2649 PBPRB1411 hypothetical proteinchromosome 2 CDS1568454 366 + 0.385246
CV2853 PBPRB0212 putative ATP-dependent RNA helicase DbpAchromosome 2 CDS237697 1389 + 0.429086
CV4366 PBPRB1942 putative transcriptional regulator, AraC/XylSfamilychromosome 2 CDS2136240 918 + 0.437909
DSDC PBPRB1594 hypothetical transcription regulator LysR familychromosome 2 CDS1743982 945 + 0.435979
ECS0359 PBPRB1747 putative transcriptional regulatorchromosome 2 CDS1901332 579 - 0.487047
ECS2508 PBPRB0598 hypothetical transcriptional regulatorchromosome 2 CDS716399 915 + 0.438251
ECS4290 PBPRB0529 hypothetical acetyltransferasechromosome 2 CDS615784 492 + 0.410569
EF2774 PBPRB1657 Hypothetical transcriptional regulatorchromosome 2 CDS1803744 369 - 0.425474
GCVA PBPRB1901 putative glycine cleavage operon activatorchromosome 2 CDS2091872 927 - 0.412082
HPKR PBPRB1430 hypothetical transcriptional regulatorchromosome 2 CDS1586338 894 - 0.419463
MDER PBPRB1910 putative Lrp/AsnC-like transcriptional regulatorchromosome 2 CDS2103908 450 - 0.393333
MLL2686 PBPRB1962 putative transcriptional regulator, AraC/XylS familychromosome 2 CDS2159245 342 - 0.429825
MLL3827 PBPRB0072 putative transcriptional regulatorchromosome 2 CDS91541 894 + 0.409396
MTV005.1 PBPRB0027 conserved hypothetical proteinchromosome 2 CDS37653 582 + 0.477663
NCU07849 PBPRB0684 putative transcriptional activatorchromosome 2 CDS805455 669 - 0.428999
OHRR PBPRB1176 hypothetical transcriptional regulator, MarR familychromosome 2 CDS1327546 477 - 0.396226
OMPR-2 PBPRB1908 putative DNA-binding response regulatorchromosome 2 CDS2102019 726 - 0.438017
OMPR-2 PBPRB1585 putative two-component response regulatorchromosome 2 CDS1731502 708 + 0.425141
PA0780 PBPRB2001 hypothetical transcriptional regulator, AraC/XylS familychromosome 2 CDS2204527 798 - 0.403509
PALR PBPRB0712 hypothetical transcriptional regulatorchromosome 2 CDS835941 939 - 0.380192
PLU0719 PBPRB0960 hypothetical DNA-directed RNA polymerase, sigma subunitchromosome 2 CDS1093648 876 + 0.38242
PLU2562 PBPRB1140 hypothetical proteinchromosome 2 CDS1287115 450 + 0.344444
PLU4523 PBPRB0427 putative ATP-dependent RNA helicasechromosome 2 CDS498315 1872 + 0.457799
PLU4789 PBPRB1674 Hypothetical phage repressor protein Cchromosome 2 CDS1816697 330 + 0.4
PP0807 PBPRB1897 putative sigma-54 dependenttranscriptional regulatorchromosome 2 CDS2086293 1569 - 0.437859
PP1615 PBPRB1569 Putative transcriptional regulator, LysR familychromosome 2 CDS1720085 882 + 0.417234
PP1854 PBPRB1420 conserved hypothetical proteinchromosome 2 CDS1577955 516 + 0.399225
PP1860 PBPRB1157 putative transcriptional regulator, MarR familychromosome 2 CDS1304882 423 - 0.416076
PP2425 PBPRB1641 hypothetical AraC-type DNA-binding domain-containing proteinchromosome 2 CDS1789755 387 + 0.44186
PP3439 PBPRB0077 hypothetical transcriptional regulatorchromosome 2 CDS99275 819 - 0.404151
PP3564 PBPRB1132 putative transcriptional regulatorchromosome 2 CDS1278641 969 + 0.429309
PP3811 PBPRB0964 hypothetical LysR, Transcriptional regulatorchromosome 2 CDS1097501 927 + 0.426106
PSPTO274 PBPRB1113 putative transcriptional regulatorchromosome 2 CDS1260300 378 + 0.378307
PSSR PBPRB1481 hypothetical transcriptional regulator, LysR familychromosome 2 CDS1637295 861 + 0.420441
R01158 PBPRB0173 hypothetical acetyltransferasechromosome 2 CDS194494 906 + 0.419426
RA1078 PBPRB1051 hypothetical proteinchromosome 2 CDS1197222 300 + 0.356667
RB0795 PBPRB1044 putative transcriptional regulator, LysR familychromosome 2 CDS1191415 924 - 0.425325
RB5308 PBPRB0256 putative melibiose operon regulatory proteinchromosome 2 CDS290982 507 - 0.465483
RBSR PBPRB1561 Putative ribose operon repressor, rbsRchromosome 2 CDS1712287 1002 + 0.428144
RHLE PBPRB1232 putative ATP-dependent RNA helicase RhlEchromosome 2 CDS1381325 1416 - 0.449859
RS01682 PBPRB0222 hypothetical transcription regulator proteinchromosome 2 CDS250787 900 + 0.394444
RS01682 PBPRB1577 hypothetical transcriptional regulatorchromosome 2 CDS1726420 894 + 0.44519
RS02618 PBPRB1860 hypothetical transcriptional regulatorchromosome 2 CDS2038905 921 - 0.387622
RS04592 PBPRB1321 putative transcriptional regulator, HTH_3familychromosome 2 CDS1464406 627 - 0.416268
RS05428 PBPRB0518 hypothetical transcriptional regulatorchromosome 2 CDS604855 774 - 0.382429
RSC0132 PBPRB0080 hypothetical bacterial regulatory helix-turn-helix proteinchromosome 2 CDS104246 468 - 0.395299
RSC3129 PBPRB0310 hypothetical sigma-54 dependent transcriptional regulatorchromosome 2 CDS352729 1812 + 0.421634
RTH1 PBPRB0089 putative prophage MuSo1, transcriptional regulator, Cro/CI familychromosome 2 CDS111285 663 - 0.411765
S0788 PBPRB1008 putative ATP-dependent RNA helicasechromosome 2 CDS1147474 1296 + 0.422839
S1065 PBPRB0025 hypothetical DNA-binding response regulatorTorRchromosome 2 CDS33436 702 + 0.470085
S1288 PBPRB0216 hypothetical Glycerol metabolism operon regulatory proteinchromosome 2 CDS241197 1956 + 0.436605
S2921 PBPRB1035 hypothetical transcriptional regulator GlpRchromosome 2 CDS1182061 795 + 0.391195
S3625 PBPRB0257 hypothetical melibiose operon regulatory proteinchromosome 2 CDS291571 420 - 0.45
SA2454 PBPRB1535 Hypothetical acetyltransferasechromosome 2 CDS1685645 486 + 0.403292
SCI30A.1 PBPRB1505 putative SoxR proteinchromosome 2 CDS1657072 432 - 0.435185
SCO3699 PBPRB1260 hypothetical arsenical resistance operon repressorchromosome 2 CDS1404421 324 - 0.407407
SF0194 PBPRB1652 Putative transcriptional regulator, LysR familychromosome 2 CDS1799972 894 - 0.46085
SF0747 PBPRB0199 putative ATP-dependent RNA helicasechromosome 2 CDS218106 1368 - 0.421053
SF2730 PBPRB0140 putative DeoR-family regulatory proteinchromosome 2 CDS162384 777 + 0.422136
SF2822 PBPRB0981 hypothetical proteinchromosome 2 CDS1119565 969 + 0.397317
SF3166 PBPRB1036 hypothetical GlpR, transcriptional regulators of sugar metabolismchromosome 2 CDS1183238 777 + 0.445302
SF4346 PBPRB0268 hypothetical transcriptional regulatorchromosome 2 CDS308484 756 - 0.462963
SMA1782 PBPRB1939 hypothetical transcriptional regulatorchromosome 2 CDS2131374 873 - 0.424971
SMA1782 PBPRB1418 hypothetical transcriptional regulatorchromosome 2 CDS1576504 852 - 0.426056
SMC00458 PBPRB0844 putative DNA-binding response regulatorchromosome 2 CDS976217 600 - 0.403333
SMC02366 PBPRB0262 hypothetical DNA-binding response regulatorchromosome 2 CDS298972 678 - 0.417404
SO3393 PBPRB1367 putative transcriptional regulator, TetR familychromosome 2 CDS1522640 537 + 0.430168
SO3743 PBPRB0512 putative transcriptional regulator LuxTchromosome 2 CDS598640 462 + 0.387446
SO3783 PBPRB1761 putative ATP-dependent RNA helicasechromosome 2 CDS1928264 1158 - 0.430915
SO4556 PBPRB1298 hypothetical transcriptional regulator, LysR familychromosome 2 CDS1440968 906 - 0.35872
SO4556 PBPRB0724 hypothetical transcriptionalchromosome 2 CDS852049 942 + 0.43949
SRMB PBPRB0982 putative ATP-dependent RNA helicasechromosome 2 CDS1120665 1425 - 0.427368
STM1598 PBPRB1592 Hypothetical transcriptional regulatorchromosome 2 CDS1740887 1419 - 0.427061
STM3515 PBPRB1331 putative malT regulatory proteinchromosome 2 CDS1484134 2709 + 0.411222
STY1005 PBPRB1954 hypothetical transcriptional regulatorchromosome 2 CDS2152687 492 + 0.436992
STY4737 PBPRB0272 putative DEOR-type transcriptional regulatorchromosome 2 CDS312536 756 - 0.465608
STY4862 PBPRB1510 Hypothetical exu regulon transcriptional regulatorchromosome 2 CDS1661046 654 - 0.37156
T2471 PBPRB1155 hypothetical ROK family proteinchromosome 2 CDS1303254 939 - 0.425985
T4109 PBPRB1774 hypothetical proteinchromosome 2 CDS1940304 447 - 0.357942
T4556 PBPRB1875 putative transcriptional regulatory proteinchromosome 2 CDS2059773 684 - 0.421053
TM1330 PBPRB0557 hypotethical transcriptional regulatorchromosome 2 CDS648040 345 + 0.330435
TTE0774 PBPRB0706 putative transcriptional regulatorchromosome 2 CDS827053 669 - 0.400598
TTE0870 PBPRB1914 hypothetical 2-component transcriptional regulatorchromosome 2 CDS2107261 723 + 0.385892
UHPA PBPRB0378 putative transcriptional regulator UhpAchromosome 2 CDS431664 630 - 0.415873
UMUD PBPRB0973 hypothetical proteinchromosome 2 CDS1108007 444 - 0.427928
VC1390 PBPRB0766 putative transcriptional regulator, LysR familychromosome 2 CDS897429 888 - 0.420045
VCA0689 PBPRB1839 conserved hypothetical proteinchromosome 2 CDS2014927 354 - 0.372881
VCA0689 PBPRB0351 conserved hypothetical proteinchromosome 2 CDS397604 348 + 0.373563
VCA0756 PBPRB1017 hypothetical LysR, Transcriptional regulatorchromosome 2 CDS1161197 891 + 0.372615
VP0514 PBPRB0440 hypothetical sigma-54 dependent transcriptional regulatorchromosome 2 CDS510928 1359 + 0.362767
VP1093 PBPRB1427 hypothetical transcriptional regulatorchromosome 2 CDS1583189 462 - 0.437229
VP1586 PBPRB0952 hypothetical proteinchromosome 2 CDS1088412 264 + 0.409091
VPA0315 PBPRB1802 putative transcriptional regulator, LysR familychromosome 2 CDS1967841 879 - 0.408419
VPA0315 PBPRB1224 putative transcriptional regulatorchromosome 2 CDS1372076 921 - 0.424539
VPA1299 PBPRB0449 hypothetical transcriptional regulator, TetR familychromosome 2 CDS522786 567 + 0.444444
VPA1573 PBPRB1050 hypothetical proteinchromosome 2 CDS1196643 471 - 0.386412
VPA1607 PBPRB1431 putative transcriptional regulatorchromosome 2 CDS1587265 897 - 0.457079
VV20888 PBPRB0854 hypothetical transcriptional regulatorchromosome 2 CDS986580 891 + 0.388328
VV20993 PBPRB1339 hypothetical transcriptional regulatorchromosome 2 CDS1493075 867 - 0.399077
VV2121 PBPRB0197 hypothetical proteinchromosome 2 CDS217319 312 - 0.358974
VVA0530 PBPRB1179 conserved hypothetical proteinchromosome 2 CDS1329588 1071 + 0.399627
VVA0761 PBPRB0409 putative transcriptional regulatorchromosome 2 CDS469335 954 - 0.422432
VVA0998 PBPRB0683 hypothetical transcriptional regulator, TetR familychromosome 2 CDS804767 588 + 0.389456
VVA1052 PBPRB1779 putative cold shock proteinchromosome 2 CDS1945145 315 - 0.390476
VVA1052 PBPRB1858 putative Cold shock-like proteinchromosome 2 CDS2037558 210 - 0.433333
VVA1052 PBPRB1929 putative Cold shock-like proteinchromosome 2 CDS2122849 210 - 0.428571
VVA1052 PBPRB0036 putative Cold shock-like proteinchromosome 2 CDS50257 240 - 0.4
VVA1234 PBPRB1787 putative transcriptional regulatorchromosome 2 CDS1952394 891 + 0.434343
VVA1249 PBPRB1682 Hypothetical AraC-type transcriptional regulatorchromosome 2 CDS1827335 894 + 0.403803
VVA1695 PBPRB2024 hypothetical ParB family proteinchromosome 2 CDS2234897 975 - 0.401026
XAC1185 PBPRB0909 hypothetical proteinchromosome 2 CDS1050025 510 + 0.401961
XAC1221 PBPRB0749 hypothetical two-component response regulatorchromosome 2 CDS876780 675 - 0.388148
XF1996 PBPRB1317 hypothetical transcriptional regulatorchromosome 2 CDS1459578 363 + 0.440771
Y2012 PBPRB0292 hypothetical proteinchromosome 2 CDS332995 276 + 0.398551
YJFJ PBPRB0055 conserved hypothetical proteinchromosome 2 CDS68059 687 - 0.438137
YJIE PBPRB1351 hypothetical transcriptional regulatorchromosome 2 CDS1506684 900 - 0.392222
YPO0074 PBPRB0700 putative transcriptional regulator CpxRchromosome 2 CDS818930 669 + 0.424514
YPO1029 PBPRB1776 hypothetical transcriptional regulatorchromosome 2 CDS1941809 894 + 0.427293
Z0841 PBPRB0327 putative transcriptional regulatory protein KdpEchromosome 2 CDS374523 708 - 0.402542
Z2874 PBPRB1738 putative transcriptional regulatorchromosome 2 CDS1889212 786 + 0.396947
Z4435 PBPRB1763 hypothetical proteinchromosome 2 CDS1930380 426 + 0.413146
Z5025 PBPRB0361 putative mannitol operon repressorchromosome 2 CDS406131 531 - 0.412429