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2024-05-19 07:13:25

Gene list

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COG category: Transcription
Genomic element: chromosome II

Number of genes found: 131

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Vibrio fischeri ES114, ES114
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA VFA0053 transcriptional regulators, LysR familychromosome II CDS57129 903 + 0.37763
NA VFA0833 transcriptional regulator, AraC familychromosome II CDS938070 783 - 0.324393
NA VFA0384 ATP-dependent RNA helicasechromosome II CDS434633 1905 + 0.450919
NA VFA0063 transcriptional regulatorchromosome II CDS68918 519 + 0.34104
NA VFA0791 transcriptional regulators, LysR familychromosome II CDS887279 909 + 0.358636
NA VFA0595 cold shock proteinchromosome II CDS678967 207 - 0.400966
NA VFA0255 transcriptional regulator, AraC familychromosome II CDS286890 789 + 0.375158
NA VFA0597 transcriptional regulators, LysR familychromosome II CDS680013 936 + 0.383547
NA VFA0785 transcriptional regulator, AraC familychromosome II CDS880584 900 - 0.357778
NA VFA1066 transcriptional regulator, LysR familychromosome II CDS1203632 900 - 0.374444
NA VFA0851 transcriptional regulatory proteinchromosome II CDS961390 870 - 0.386207
NA VFA1082 transcriptional regulator, AraC familychromosome II CDS1222789 810 + 0.214815
NA VFA0031 transcriptional regulators, LysR familychromosome II CDS33115 885 - 0.39548
NA VFA0857 transcriptional repressor SmtBchromosome II CDS966803 342 + 0.368421
NA VFA1086 transcriptional regulators, LysR familychromosome II CDS1227469 891 + 0.368126
NA VFA0991 hypothetical proteinchromosome II CDS1113846 1518 - 0.372859
NA VFA0240 SUA5 proteinchromosome II CDS266829 1122 - 0.270945
NA VFA0029 transcriptional regulator, AraC familychromosome II CDS31173 888 + 0.371622
NA VFA0852 transcriptional regulatory proteinchromosome II CDS962372 1155 + 0.405195
NA VFA1115 transcriptional regulators, LysR familychromosome II CDS1256569 885 + 0.40791
NA VFA0259 hypothetical transcriptional regulatory proteinchromosome II CDS290670 1101 - 0.288828
NA VFA0489 transcriptional regulators, LysR familychromosome II CDS563552 933 - 0.35477
NA VFA0460 transcription-repair coupling factorchromosome II CDS529000 1902 - 0.423239
NA VFA0105 transcriptional regulatorchromosome II CDS117794 936 + 0.387821
NA VFA0151 ATP-dependent RNA helicasechromosome II CDS166800 1503 + 0.407851
NA VFA0034 transcriptional regulators, LysR familychromosome II CDS35233 897 - 0.419175
NA VFA0400 PTS system, mannitol-specific IIBC componentchromosome II CDS454959 981 - 0.417941
NA VFA0931 transcriptional regulatory, AraC-likechromosome II CDS1055661 786 - 0.357506
NA VFA0041 two component response regulator UhpAchromosome II CDS44954 609 - 0.422003
NA VFA0024 transcriptional regulators, LysR familychromosome II CDS26478 951 + 0.392219
NA VFA0214 probable transcriptional regulator SyrBchromosome II CDS238746 909 - 0.356436
NA VFA0553 ATP-dependent RNA helicasechromosome II CDS637578 1383 + 0.388286
NA VFA1109 transcriptional regulators, LysR familychromosome II CDS1252771 903 + 0.393134
NA VFA0708 transcriptional regulator, AraC familychromosome II CDS793867 858 - 0.39627
NA VFA1142 transcriptional regulators, LysR familychromosome II CDS1286567 888 - 0.415541
NA VFA0582 cryptic phage CTXphi transcriptional repressor rstRchromosome II CDS665216 336 + 0.300595
NA VFA0653 IAA acetyltransferasechromosome II CDS727237 453 - 0.342163
NA VFA0738 hypothetical proteinchromosome II CDS835543 642 - 0.431464
NA VFA1094 cold shock proteinchromosome II CDS1234560 210 - 0.414286
NA VFA0523 DNA-binding proteinchromosome II CDS598019 192 + 0.411458
NA VFA0176 transcriptional regulator, ArsR familychromosome II CDS199429 312 + 0.38141
NA VFA0925 LuxR, transcriptional regulatorchromosome II CDS1050941 753 + 0.304117
NA VFA1160 transcriptional regulatorchromosome II CDS1304480 909 + 0.409241
NA VFA0771 transcriptional regulators, LysR familychromosome II CDS866746 873 + 0.367698
NA VFA1054 acetyltransferasechromosome II CDS1190589 432 - 0.356481
NA VFA0846 hypothetical proteinchromosome II CDS955271 1191 + 0.36272
NA VFA0415 hypothetical proteinchromosome II CDS470014 1230 + 0.341463
NA VFA0811 MalT regulatory proteinchromosome II CDS916154 2706 + 0.383962
NA VFA0387 transcriptional regulators, LysR familychromosome II CDS439064 912 + 0.382675
NA VFA0862 nitric oxide reductase regulator NorRchromosome II CDS971755 1536 + 0.384115
NA VFA0043 transcriptional regulator, TetR familychromosome II CDS47378 744 - 0.358871
NA VFA0254 hypothetical proteinchromosome II CDS285957 381 - 0.364829
NA VFA1126 AraC family transcriptional regulatorchromosome II CDS1266436 891 + 0.252525
NA VFA0943 catabolite repressor-activatorchromosome II CDS1066257 978 + 0.394683
NA VFA0911 transcriptional regulators, LysR familychromosome II CDS1036472 909 + 0.354235
NA VFA0049 hypothetical proteinchromosome II CDS54130 396 - 0.368687
NA VFA0154 ATP-dependent RNA helicase DbpAchromosome II CDS171550 1389 - 0.403888
NA VFA0730 transcriptional regulators, LysR familychromosome II CDS826961 888 - 0.362613
NA VFA0258 transcriptional regulator, MerR familychromosome II CDS289130 1503 + 0.394544
NA VFA1122 L-2,4-diaminobutyric acid acetyltransferasechromosome II CDS1262222 558 + 0.405018
NA VFA0860 hypothetical proteinchromosome II CDS970724 483 + 0.291925
NA VFA0359 transcriptional regulator, TetR familychromosome II CDS403988 612 + 0.366013
NA VFA0496 Mlc proteinchromosome II CDS571437 1215 + 0.397531
NA VFA1015 RpoS-like sigma factorchromosome II CDS1142264 885 - 0.324294
NA VFA0374 ATP-dependent RNA helicasechromosome II CDS422266 1305 + 0.384674
NA VFA0361 transcriptional repressorchromosome II CDS407371 999 - 0.375375
NA VFA0724 transcriptional regulators, LysR familychromosome II CDS821808 924 - 0.376623
NA VFA0935 transcriptional regulators, LysR familychromosome II CDS1058205 882 + 0.380952
NA VFA0114 methyltransferasechromosome II CDS129335 1170 + 0.384615
NA VFA0038 transcriptional regulators, LysR familychromosome II CDS40996 840 + 0.403571
NA VFA0247 SUA5 proteinchromosome II CDS274290 1164 - 0.306701
NA VFA0751 transcriptional regulatory protein TyrRchromosome II CDS848054 1548 - 0.378553
NA VFA1006 transcriptional regulator, GlpR familychromosome II CDS1131240 777 - 0.404118
NA VFA1121 transcriptional regulator, MarR familychromosome II CDS1261533 426 + 0.380282
NA VFA0383 exoribonuclease IIchromosome II CDS432267 2043 - 0.397455
NA VFA1171 DNA-binding protein ParBchromosome II CDS1329801 975 - 0.391795
NA VFA0688 hypothetical proteinchromosome II CDS761935 783 - 0.284802
NA VFA0593 transcriptional regulator, TetR familychromosome II CDS677682 462 - 0.380952
NA VFA0211 transcriptional regulatorchromosome II CDS234641 687 + 0.352256
NA VFA1046 transcriptional regulator, LysR familychromosome II CDS1181671 870 + 0.402299
NA VFA0880 putative DNA-binding Protein--AraC type helix turn helixchromosome II CDS993198 852 + 0.248826
NA VFA0978 transcriptional regulators, LysR familychromosome II CDS1100655 870 + 0.385057
NA VFA0179 transcriptional activator protein IrlRchromosome II CDS201600 681 - 0.367107
NA VFA0739 acetyltransferasechromosome II CDS836370 495 + 0.416162
NA VFA1053 transcriptional regulator, MerR familychromosome II CDS1189990 522 + 0.373563
NA VFA0454 histidine utilization repressorchromosome II CDS523677 702 - 0.349003
NA VFA0320 transcriptional activator TenAchromosome II CDS354202 663 + 0.393665
NA VFA0334 transcriptional regulator, MarR familychromosome II CDS371751 519 - 0.342967
NA VFA0506 two component response regulatorchromosome II CDS580603 1746 + 0.35567
NA VFA1148 transcriptional regulators, LysR familychromosome II CDS1291558 963 - 0.403946
NA VFA1048 transcriptional regulators, LysR familychromosome II CDS1184127 930 - 0.38172
NA VFA0313 stress-responsive transcriptional regulator PspCchromosome II CDS347618 387 + 0.405685
NA VFA0646 hypothetical proteinchromosome II CDS721488 459 - 0.350763
NA VFA0645 acetyltransferasechromosome II CDS720903 444 - 0.353604
NA VFA1063 transcriptional regulator, MarR familychromosome II CDS1200669 474 + 0.392405
NA VFA0871 hypothetical proteinchromosome II CDS984628 480 - 0.25625
NA VFA0580 hypothetical proteinchromosome II CDS663611 327 - 0.314985
NA VFA0669 hypothetical proteinchromosome II CDS739720 342 - 0.380117
NA VFA0088 transcriptional regulatorchromosome II CDS96381 615 + 0.37561
NA VFA0054 transcriptional regulator, Cro/CI familychromosome II CDS58095 210 - 0.366667
NA VFA0897 transcriptional regulators, LysR familychromosome II CDS1018124 864 - 0.344907
NA VFA0311 phage shock protein Achromosome II CDS346665 666 + 0.358859
NA VFA0793 transcriptional regulators, LysR familychromosome II CDS889413 903 + 0.379845
NA VFA0584 hypothetical proteinchromosome II CDS667955 579 - 0.367876
NA VFA0820 RNA polymerase sigma factor SigZchromosome II CDS924448 546 - 0.322344
NA VFA0732 transcriptional regulatorchromosome II CDS829694 804 - 0.370647
NA VFA0238 glycerol-3-phosphate regulon repressorchromosome II CDS264307 768 + 0.354167
NA VFA0181 probable transcriptional regulator SyrBchromosome II CDS202959 666 + 0.393393
NA VFA0525 transcriptional regulator, AraC familychromosome II CDS599174 768 + 0.269531
NA VFA0436 hypothetical transcriptional regulatory proteinchromosome II CDS500178 678 - 0.361357
NA VFA1113 transcriptional regulator, AsnC familychromosome II CDS1255307 444 + 0.385135
NA VFA0556 hypothetical proteinchromosome II CDS640324 801 - 0.364544
NA VFA0766 rna polymerase sigma-E factor homologuechromosome II CDS862237 612 - 0.374183
NA VFA0459 transcription-repair coupling factorchromosome II CDS527447 1599 - 0.409006
NA VFA0348 Ebg operon repressorchromosome II CDS389163 996 - 0.371486
NA VFA0744 transcriptional regulators, LysR familychromosome II CDS840741 888 + 0.344595
NA VFA0025 transcriptional regulator, MarR familychromosome II CDS27455 456 - 0.375
NA VFA0701 transcriptional regulatorchromosome II CDS778199 657 - 0.394216
NA VFA0963 transcriptional regulators, LysR familychromosome II CDS1085479 933 - 0.356913
NA VFA0662 acetyltransferasechromosome II CDS734797 426 - 0.361502
NA VFA0419 transcriptional regulators, LysR familychromosome II CDS474092 936 + 0.362179
NA VFA0271 transcriptional regulators, LysR familychromosome II CDS302268 303 + 0.363036
NA VFA0231 hypothetical proteinchromosome II CDS254374 636 + 0.261006
NA VFA1024 transcriptional regulatorchromosome II CDS1154988 1518 + 0.368906
NA VFA0270 transcriptional regulatorchromosome II CDS301662 576 + 0.381944
NA VFA1061 transcriptional regulators, LysR familychromosome II CDS1198171 915 + 0.342077
NA VFA0266 transcriptional regulatorchromosome II CDS298339 666 - 0.366366
NA VFA0561 transcriptional regulatorchromosome II CDS645882 657 + 0.391172
NA VFA0626 acetyltransferasechromosome II CDS705157 435 - 0.326437
NA VFA0893 transcriptional regulator, AraC familychromosome II CDS1013390 1011 + 0.3818
NA VFA0310 psp operon transcriptional activatorchromosome II CDS345470 1020 - 0.378431