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Gene list

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COG category: Transcription
Genomic element: chromosome 1

Number of genes found: 202

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Burkholderia mallei ATCC 23344, ATCC 23344
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA BMA3396 hypothetical proteinchromosome 1 CDS3506457 462 + 0.603896
NA BMA0196 transcriptional regulator, TetR familychromosome 1 CDS208735 600 + 0.63
NA BMA2049 transcriptional regulator, LysR familychromosome 1 CDS2147128 981 + 0.672783
NA BMA0515 acetyltransferase, GNAT familychromosome 1 CDS541790 504 - 0.71627
NA BMA1374 transcriptional regulator, MerR familychromosome 1 CDS1431791 495 - 0.666667
NA BMA2791 cold-shock domain family proteinchromosome 1 CDS2881539 204 - 0.573529
NA BMA2063 transcriptional regulator, IclR familychromosome 1 CDS2162657 792 - 0.714646
NA BMA0055 glycine cleavage system transcriptional activatorchromosome 1 CDS62578 966 + 0.713251
NA BMA1961 transcriptional regulator, LysR familychromosome 1 CDS2057937 897 + 0.725753
NA BMA0314 transcriptional regulator, TetR familychromosome 1 CDS329828 636 - 0.669811
NA BMA0261 response regulatorchromosome 1 CDS278886 1320 - 0.667424
NA BMA0323 transcriptional regulator, AraC familychromosome 1 CDS341428 1035 - 0.690821
NA BMA2212 transcriptional regulator, LysR familychromosome 1 CDS2296744 885 - 0.711864
NA BMA2046 transcriptional regulator, AraC familychromosome 1 CDS2144116 876 + 0.710046
NA BMA3050 transcriptional regulator, GntR familychromosome 1 CDS3144093 1476 + 0.699187
NA BMA1756 transcriptional regulator, LysR familychromosome 1 CDS1846397 903 + 0.671096
NA BMA1952 aminotransferase family proteinchromosome 1 CDS2050359 1182 + 0.691201
NA BMA2928 transcriptional regulator, AsnC familychromosome 1 CDS3018108 546 + 0.635531
NA BMA1259 transcriptional regulator, GntR familychromosome 1 CDS1308568 714 - 0.645658
NA BMA2114 acetyltransferase, GNAT familychromosome 1 CDS2202604 711 - 0.648383
NA BMA3290 DNA-binding response regulator, LuxR familychromosome 1 CDS3400824 1368 - 0.709064
NA BMA2074 conserved hypothetical protein TIGR00244chromosome 1 CDS2170360 480 - 0.658333
NA BMA2683 transcriptional regulator, MerR familychromosome 1 CDS2783908 429 + 0.729604
NA BMA1472 transcriptional regulator, LuxR familychromosome 1 CDS1526161 1149 - 0.687554
NA BMA0958 transcriptional regulator, LysR familychromosome 1 CDS1011700 894 + 0.734899
NA BMA0078 transcriptional regulator, IclR familychromosome 1 CDS85190 948 + 0.709916
NA BMA2947 stage 0 sporulation protein J, putativechromosome 1 CDS3040121 888 + 0.658784
NA BMA0879 DNA-binding response regulatorchromosome 1 CDS916187 633 + 0.691943
NA BMA0833 DNA-binding response regulatorchromosome 1 CDS873402 783 + 0.655172
NA BMA2769 transcriptional regulator, LysR familychromosome 1 CDS2859582 924 + 0.70671
NA BMA2165 transcriptional regulator, Sir2 familychromosome 1 CDS2250083 1353 - 0.694752
NA BMA0606 Rrf2 family proteinchromosome 1 CDS633341 498 - 0.650602
NA BMA0446 molybdate transport repressor domain proteinchromosome 1 CDS469030 1035 - 0.725604
NA BMA3062 transcriptional regulator, putativechromosome 1 CDS3159401 639 + 0.690141
NA BMA3252 response regulatorchromosome 1 CDS3361210 543 + 0.662983
NA BMA1098 GTP pyrophosphokinasechromosome 1 CDS1141032 2238 - 0.68588
NA BMA2008 hypothetical proteinchromosome 1 CDS2106108 567 + 0.698413
NA BMA2771 transcriptional regulator, MarR familychromosome 1 CDS2862275 492 - 0.697154
NA BMA2658 transcriptional regulator, PadR familychromosome 1 CDS2755579 342 - 0.649123
NA BMA0490 transcriptional regulator, ArsR familychromosome 1 CDS521369 711 - 0.732771
NA BMA2395 transcriptional regulator, putativechromosome 1 CDS2501688 537 + 0.722533
NA BMA0936 transcriptional regulatorchromosome 1 CDS987878 942 + 0.686837
NA BMA1780 transcriptional regulator, AsnC familychromosome 1 CDS1874360 468 - 0.660256
NA BMA2399 transcriptional regulator, GntR familychromosome 1 CDS2505234 777 - 0.694981
NA BMA1405 conserved hypothetical proteinchromosome 1 CDS1462825 1026 - 0.744639
NA BMA2020 acetyltransferase, GNAT familychromosome 1 CDS2114575 528 + 0.719697
NA BMA2974 transcriptional regulator, PadR familychromosome 1 CDS3071753 642 - 0.674455
NA BMA2279 cold-shock domain family proteinchromosome 1 CDS2363684 204 - 0.534314
NA BMA1055 transcriptional regulator, MarR familychromosome 1 CDS1102720 498 + 0.660643
NA BMA0138 transcriptional regulator, LysR familychromosome 1 CDS147180 1056 + 0.671402
NA BMA3070 transcriptional regulator, LacI familychromosome 1 CDS3167800 1017 + 0.718781
NA BMA1154 transcriptional regulator, MarR familychromosome 1 CDS1195908 495 - 0.719192
NA BMA2370 conserved hypothetical proteinchromosome 1 CDS2473491 687 - 0.703057
NA BMA0965 transcriptional regulator, LacI familychromosome 1 CDS1018104 1044 + 0.694444
NA BMA3168 transcriptional regulator, GntR familychromosome 1 CDS3271402 735 + 0.744218
NA BMA1617 transcriptional regulator, TetR familychromosome 1 CDS1679322 567 + 0.680776
NA BMA1067 transcptional regulator, LysR familychromosome 1 CDS1118137 903 - 0.704319
NA BMA0122 transcriptional regulator, LysR familychromosome 1 CDS134213 969 - 0.714138
NA BMA0896 transcriptional regulator, LysR familychromosome 1 CDS939169 966 - 0.744306
NA BMA1275 transcriptional regulator, TetR familychromosome 1 CDS1328335 957 + 0.708464
NA BMA0118 RNA polymerase sigma factor RpoD, putativechromosome 1 CDS130688 1449 - 0.705314
NA BMA2490 transcriptional regulator, IclR familychromosome 1 CDS2592182 918 - 0.703704
NA BMA0870 transcriptional regulator, LysR familychromosome 1 CDS905930 894 + 0.674497
NA BMA2975 transcriptional regulator, merR familychromosome 1 CDS3072494 432 - 0.631944
NA BMA0339 transcriptional regulator, LysR familychromosome 1 CDS358633 885 - 0.716384
NA BMA1329 transcription accessory protein, TEXchromosome 1 CDS1387490 2325 + 0.687312
NA BMA2930 transcriptional regulator, LysR familychromosome 1 CDS3019675 900 - 0.716667
NA BMA2495 ribonuclease II (RNB) family proteinchromosome 1 CDS2597616 2079 - 0.689755
NA BMA2987 transcriptional regulator, araC familychromosome 1 CDS3088127 1029 + 0.735666
NA BMA2581 leucine-responsive regulatory protein, putativechromosome 1 CDS2687318 516 - 0.655039
NA BMA0967 hypothetical proteinchromosome 1 CDS1019966 405 + 0.691358
NA BMA2717 BolA/YrbA family proteinchromosome 1 CDS2809134 240 - 0.6125
NA BMA0922 DNA-binding response regulatorchromosome 1 CDS966311 705 + 0.641135
NA BMA1034 DNA-binding response regulatorchromosome 1 CDS1079375 666 + 0.63964
NA BMA2907 transcriptional regulator, AsnC familychromosome 1 CDS2999074 459 - 0.633987
NA BMA0812 transcriptional regulator, GntR familychromosome 1 CDS845013 1461 - 0.670773
NA BMA2670 transcriptional regulator, AraC familychromosome 1 CDS2767349 960 - 0.663542
NA BMA1714 transcriptional regulator, IclR familychromosome 1 CDS1786105 813 + 0.682657
NA BMA2462 transcriptional regulator, GntR familychromosome 1 CDS2565400 693 + 0.665224
NA BMA1378 Rrf2 family proteinchromosome 1 CDS1436790 498 - 0.658635
NA BMA3222 acetyltransferase, GNAT familychromosome 1 CDS3324940 465 - 0.694624
NA BMA1584 ATP-dependent RNA helicase RhlE, putativechromosome 1 CDS1647768 1551 + 0.724694
NA BMA3242 transcriptional regulator, AraC familychromosome 1 CDS3351185 945 + 0.701587
NA BMA0590 transcriptional regulator, AraC familychromosome 1 CDS616232 1038 + 0.683044
NA BMA0354 transcriptional regulator, AsnC familychromosome 1 CDS376832 504 + 0.650794
NA BMA3312 conserved hypothetical proteinchromosome 1 CDS3424508 513 + 0.631579
NA BMA0972 transcriptional regulator, AsnC familychromosome 1 CDS1025263 462 + 0.688312
NA BMA2676 DNA-binding response regulatorchromosome 1 CDS2777364 678 - 0.672566
NA BMA0174 transcriptional regulator, MarR familychromosome 1 CDS184759 435 + 0.701149
NA BMA0271 DNA-binding response regulatorchromosome 1 CDS289180 744 - 0.697581
NA BMA1997 conserved hypothetical proteinchromosome 1 CDS2094772 579 - 0.65285
NA BMA1736 DNA-binding response regulator NarLchromosome 1 CDS1820596 702 + 0.692308
NA BMA1089 transcriptional regulator, merR familychromosome 1 CDS1132690 405 - 0.669136
NA BMA1498 PspA/IM30 family proteinchromosome 1 CDS1556357 681 + 0.668135
NA BMA1588 transcriptional regulator, LysR familychromosome 1 CDS1653583 903 - 0.699889
NA BMA3060 transcriptional regulator, AsnC familychromosome 1 CDS3157038 495 + 0.672727
NA BMA2344 transcriptional regulator, AraC familychromosome 1 CDS2446329 744 - 0.719086
NA BMA2969 transcriptional regulator, TetR familychromosome 1 CDS3067266 687 + 0.697234
NA BMA0725 conserved hypothetical proteinchromosome 1 CDS752702 816 - 0.721814
NA BMA1784 Rrf2 family proteinchromosome 1 CDS1877316 462 - 0.709957
NA BMA0399 acetyltransferase, GNAT familychromosome 1 CDS423465 591 + 0.693739
NA BMA1406 RNA polymerase sigma-70 factor, ECF subfamilychromosome 1 CDS1463840 708 - 0.721751
NA BMA1282 sigma-54 dependent transcriptional regulatorchromosome 1 CDS1334598 1392 - 0.670259
NA BMA3235 transcriptional regulator, LysR familychromosome 1 CDS3342140 921 + 0.680782
NA BMA2032 transcriptional regulator, LysR familychromosome 1 CDS2128630 948 + 0.712025
NA BMA1594 transcriptional regulator, AraC familychromosome 1 CDS1659030 864 + 0.721065
NA BMA1150 transcriptional regulator, LysR familychromosome 1 CDS1191283 915 + 0.707104
NA BMA1511 transcriptional regulator, GntR familychromosome 1 CDS1569825 696 - 0.681035
NA BMA1929 transcriptional regulator, TetR familychromosome 1 CDS2027509 633 - 0.620853
NA BMA0177 transcriptional regulator, putativechromosome 1 CDS187445 894 + 0.719239
NA BMA1469 transcriptional regulator, MarR familychromosome 1 CDS1524251 450 + 0.671111
NA BMA1152 transcriptional regulator, MarR familychromosome 1 CDS1193739 540 + 0.722222
NA BMA3167 transcriptional regulator, LysR familychromosome 1 CDS3269743 924 + 0.693723
NA BMA1199 transcriptional regulator, AraC familychromosome 1 CDS1263919 990 - 0.684848
NA BMA1191 RNA polymerase sigma-70 factor, ECF subfamilychromosome 1 CDS1254861 624 - 0.719551
NA BMA2579 transcriptional regulator, TetR familychromosome 1 CDS2685711 600 + 0.648333
NA BMA2464 transcriptional regulator, LysR familychromosome 1 CDS2566726 936 - 0.688034
NA BMA2019 DNA-binding proteinchromosome 1 CDS2113991 588 + 0.695578
NA BMA1850 RNA polymerase sigma-70 factor, ECF subfamilychromosome 1 CDS1939386 636 + 0.608491
NA BMA0070 ranscriptional activator, Baf familychromosome 1 CDS77543 771 + 0.727626
NA BMA0089 transcriptional regulator, MarR familychromosome 1 CDS99721 417 + 0.683453
NA BMA0662 cys regulon transcriptional activatorchromosome 1 CDS685380 942 - 0.644374
NA BMA1326 ATP-dependent helicase, putativechromosome 1 CDS1383956 2259 - 0.695883
NA BMA2924 DNA-binding response regulatorchromosome 1 CDS3015609 693 - 0.655123
NA BMA2807 transcriptional regulator, TetR familychromosome 1 CDS2894770 645 + 0.697674
NA BMA2094 guanosine-3`,5`-bis(diphosphate)3`-pyrophosphohy drolasechromosome 1 CDS2185303 2370 - 0.644726
NA BMA2440 transcriptional regulator, LysR familychromosome 1 CDS2541342 951 - 0.701367
NA BMA1795 DNA-binding response regulatorchromosome 1 CDS1887236 840 + 0.657143
NA BMA2257 transcriptional regulator, GntR familychromosome 1 CDS2342239 747 + 0.655957
NA BMA2580 acetyltransferase, GNAT familychromosome 1 CDS2686432 768 + 0.636719
NA BMA0769 transcriptional regulator, AraC familychromosome 1 CDS800433 1023 + 0.702835
NA BMA0917 SIS domain proteinchromosome 1 CDS961737 1128 + 0.658688
NA BMA1126 transcriptional regulator, AraC familychromosome 1 CDS1168433 801 + 0.725343
NA BMA0308 DNA-binding response regulatorchromosome 1 CDS323739 663 + 0.698341
NA BMA1224 transcriptional regulator, putativechromosome 1 CDS1284909 477 + 0.666667
NA BMA0950 transcriptional regulator, MerR familychromosome 1 CDS1000692 192 - 0.671875
NA BMA0342 transcriptional regulator, putativechromosome 1 CDS362221 948 - 0.714135
NA BMA1205 cys regulon transcriptional activatorchromosome 1 CDS1269317 927 - 0.658037
NA BMA3322 negative regulator of flagellin synthesis FlgM, putativechromosome 1 CDS3432717 345 - 0.713043
NA BMA0838 DNA-binding response regulatorchromosome 1 CDS875959 696 + 0.652299
NA BMA3061 transcriptional regulator, GntR familychromosome 1 CDS3157738 1542 - 0.743191
NA BMA1787 transcriptional regulator, putativechromosome 1 CDS1881146 543 + 0.661142
NA BMA2005 transcriptional regulator family proteinchromosome 1 CDS2103495 435 - 0.648276
NA BMA0832 transcriptional regulator, LysR familychromosome 1 CDS872011 978 + 0.666667
NA BMA2286 hypothetical proteinchromosome 1 CDS2369946 693 - 0.72583
NA BMA1103 transcriptional regulator, LysR familychromosome 1 CDS1145977 906 - 0.720751
NA BMA0811 transcriptional regulator, MerR familychromosome 1 CDS843054 1893 + 0.689382
NA BMA2447 transcriptional regulator, RpiR familychromosome 1 CDS2550666 999 + 0.704705
NA BMA0227 transcriptional regulator, LysR familychromosome 1 CDS244460 933 - 0.690247
NA BMA1899 RNA polymerase sigma-70 factor, ECF familychromosome 1 CDS1988888 933 + 0.691318
NA BMA0229 DNA-binding proteinchromosome 1 CDS246844 669 + 0.696562
NA BMA0345 transcriptional regulator, LysR familychromosome 1 CDS366452 999 - 0.715716
NA BMA0641 autoinducer-binding transcriptional regulator, LuxR familychromosome 1 CDS666614 726 + 0.676309
NA BMA1429 acetyltransferase, GNAT familychromosome 1 CDS1483236 441 - 0.723356
NA BMA1956 DNA-binding proteinchromosome 1 CDS2053557 564 - 0.634752
NA BMA0407 leucine-responsive regulatory proteinchromosome 1 CDS429896 489 - 0.619632
NA BMA3247 transcriptional regulator, TetR familychromosome 1 CDS3356961 690 - 0.682609
NA BMA3040 transcriptional regulator, LysR familychromosome 1 CDS3136382 849 + 0.724382
NA BMA1857 transcriptional reguator, TetR familychromosome 1 CDS1944618 720 + 0.601389
NA BMA0559 transcriptional regulator, LysR familychromosome 1 CDS583677 909 - 0.716172
NA BMA1366 transcriptional regulator, MerR familychromosome 1 CDS1424301 501 + 0.708583
NA BMA3134 acetyltransferase, GNAT familychromosome 1 CDS3229800 1236 + 0.713592
NA BMA1596 acetyltransferase, GNAT familychromosome 1 CDS1660511 468 - 0.647436
NA BMA1949 transcriptional regulator, GntR familychromosome 1 CDS2047001 1455 - 0.698282
NA BMA2016 transcriptional regulator, putativechromosome 1 CDS2111772 516 - 0.639535
NA BMA2918 transcriptional regulator, MarR familychromosome 1 CDS3010126 642 + 0.663551
NA BMA0955 transcriptional regulator, TetR familychromosome 1 CDS1007739 639 + 0.658842
algU BMA0536 RNA polymerase sigma-H factorchromosome 1 CDS561655 600 + 0.616667
fis BMA2357 factor-for-inversion stimulation proteinchromosome 1 CDS2459496 234 - 0.594017
fliA BMA2843 RNA polymerase sigma factor for flagellar operon FliAchromosome 1 CDS2935072 735 - 0.666667
glpR BMA0244 glycerol-3-phosphate regulon repressorchromosome 1 CDS262470 780 - 0.658974
greA BMA0773 transcription elongation factor GreAchromosome 1 CDS807136 477 + 0.637317
greB BMA2091 transcription elongation factor GreBchromosome 1 CDS2184202 564 - 0.647163
hrcA BMA2331 heat-inducible transcription repressor HrcAchromosome 1 CDS2427453 1023 - 0.666667
hutC BMA0646 histidine utilization repressorchromosome 1 CDS672660 696 + 0.668103
ilvR BMA0678 isoleucine biosynthesis transcriptional activatorchromosome 1 CDS702598 948 + 0.737342
iscR BMA1709 iron-sulfur cluster assembly transcription factor IscRchromosome 1 CDS1782017 540 - 0.655556
kdpE BMA1872 DNA-binding response regulator KdpEchromosome 1 CDS1961045 705 - 0.696454
lexA BMA1211 lexA repressorchromosome 1 CDS1274791 648 + 0.688272
metR BMA0468 transcriptional regulator MetRchromosome 1 CDS498850 933 + 0.698821
mfd BMA1491 transcription-repair coupling factorchromosome 1 CDS1544865 3474 + 0.693725
nusA BMA1062 N utilization substance protein Achromosome 1 CDS1112424 1476 - 0.648374
nusB BMA2147 N utilization substance protein Bchromosome 1 CDS2235817 438 + 0.659817
nusG BMA2646 transcription antitermination protein NusGchromosome 1 CDS2749664 558 - 0.598566
ompR BMA0750 DNA-binding response regulator OmpRchromosome 1 CDS781623 699 + 0.695279
oxyR BMA2390 oxidative stress regulatory protein OxyRchromosome 1 CDS2496796 960 + 0.658333
phoB BMA0785 DNA-binding response regulator PhoBchromosome 1 CDS819101 702 + 0.646724
rbsR BMA3388 transcriptional regulator, LacI familychromosome 1 CDS3497584 1020 - 0.718627
recG BMA2389 ATP-dependent DNA helicase RecGchromosome 1 CDS2494600 2061 + 0.721494
rhlE BMA1917 ATP-dependent RNA helicase RhlEchromosome 1 CDS2011393 1449 - 0.688751
rhlE-2 BMA0248 ATP-dependent RNA helicase RhlEchromosome 1 CDS266994 1458 - 0.69273
rho BMA1365 transcription termination factor Rhochromosome 1 CDS1422902 1263 + 0.619161
risA BMA1485 DNA-binding response regulator RisAchromosome 1 CDS1539638 726 + 0.666667
rpoA BMA2606 dna-directed rna polymerase alpha chainchromosome 1 CDS2716106 978 - 0.625767
rpoC BMA2640 DNA-directed RNA polymerase, beta subunitchromosome 1 CDS2738425 4239 - 0.640717
rpoH BMA3138 RNA polymerase sigma-32 factorchromosome 1 CDS3234800 936 + 0.65812
rpoN BMA3108 RNA polymerase sigma-54 factorchromosome 1 CDS3203265 1509 + 0.646123
rpoS BMA1354 RNA polymerase sigma factorchromosome 1 CDS1413083 1080 - 0.646296
rpoZ BMA2095 DNA-directed RNA polymerase, omega subunitchromosome 1 CDS2187739 204 - 0.642157
scpB BMA1066 segregation and condensation protein Bchromosome 1 CDS1116390 1329 - 0.705794
ureG BMA2187 urease accessory protein UreGchromosome 1 CDS2270088 651 + 0.65745
vacB BMA1263 ribonuclease Rchromosome 1 CDS1312731 2439 - 0.681427