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2024-05-20 03:10:16

Gene list

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COG category: Transcription
Genomic element: chromosome II

Number of genes found: 93

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Vibrio cholerae O1 biovar eltor str. N16961, N16961
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
VCA0011 malT regulatory proteinchromosome II CDS8986 2766 - 0.505785
VCA0029 transcriptional regulator, putativechromosome II CDS35950 735 + 0.478912
VCA0052 hypothetical proteinchromosome II CDS59786 1563 - 0.498401
VCA0056 transcriptional regulator, MerR familychromosome II CDS63295 798 + 0.510025
VCA0061 ATP-dependent RNA helicase, DEAD box familychromosome II CDS67304 1359 + 0.479765
VCA0082 transcriptional regulator, LysR familychromosome II CDS92604 888 - 0.488739
VCA0084 soxR proteinchromosome II CDS94834 447 - 0.474273
VCA0094 conserved hypothetical proteinchromosome II CDS101796 357 + 0.420168
VCA0117 sigma-54 dependent transcriptional regulatorchromosome II CDS128790 1593 + 0.510986
VCA0132 ribose operon repressorchromosome II CDS146647 1005 + 0.497512
VCA0166 cold shock transcriptional regulator CspAchromosome II CDS184257 213 + 0.450704
VCA0182 sigma-54 dependent transcriptional regulatorchromosome II CDS200338 1593 - 0.52103
VCA0184 cold shock DNA-binding domain proteinchromosome II CDS203449 210 - 0.452381
VCA0204 ATP-dependent RNA helicase RhlEchromosome II CDS220767 1356 - 0.488938
VCA0210 response regulator, putativechromosome II CDS225591 1569 + 0.463352
VCA0231 transcriptional regulator, AraC/XylS familychromosome II CDS252511 1077 - 0.474466
VCA0239 transcriptional regulatorchromosome II CDS260372 675 + 0.484444
VCA0247 transcriptional regulator, DeoR familychromosome II CDS267445 756 + 0.47619
VCA0256 transcriptional regulatorchromosome II CDS276337 672 - 0.513393
VCA0264 transcriptional regulator, putativechromosome II CDS280935 1179 - 0.453774
VCA0266 transcriptional regulator, AraC/XylS familychromosome II CDS282737 774 - 0.466408
VCA0271 hypothetical proteinchromosome II CDS290166 348 + 0.482759
VCA0279 transcriptional regulator, HTH_3 familychromosome II CDS298001 624 + 0.49359
VCA0318 conserved hypothetical proteinchromosome II CDS325890 498 - 0.433735
VCA0382 conserved hypothetical proteinchromosome II CDS363345 426 + 0.42723
VCA0400 acetyltransferase, putativechromosome II CDS374494 456 + 0.392544
VCA0402 acetyltransferase, putativechromosome II CDS375613 519 + 0.433526
VCA0436 acetyltransferase, putativechromosome II CDS394041 516 + 0.391473
VCA0451 hypothetical proteinchromosome II CDS403167 501 + 0.331337
VCA0469 conserved hypothetical proteinchromosome II CDS415268 315 + 0.450794
VCA0479 acetyltransferase, putativechromosome II CDS420656 456 + 0.392544
VCA0481 conserved hypothetical proteinchromosome II CDS421787 498 - 0.433735
VCA0487 conserved hypothetical proteinchromosome II CDS424892 534 + 0.421348
VCA0494 hypothetical protein, interruptionchromosome II CDS428878 177 + 0.38983
VCA0498 hypothetical proteinchromosome II CDS431305 522 + 0.444444
VCA0505 acetyltransferase, putativechromosome II CDS433710 594 + 0.400673
VCA0519 fructose repressorchromosome II CDS449421 981 + 0.494393
VCA0532 DNA-binding response regulatorchromosome II CDS470476 693 + 0.471861
VCA0542 transcriptional regulator, LysR familychromosome II CDS478273 906 + 0.469095
VCA0566 transcriptional regulatorchromosome II CDS504647 738 + 0.451219
VCA0575 transcriptional regulator, LysR familychromosome II CDS513839 888 - 0.480856
VCA0586 conserved hypothetical proteinchromosome II CDS523761 597 + 0.472362
VCA0600 repressor protein PhnR, putativechromosome II CDS536432 705 - 0.499291
VCA0607 regulator of nucleoside diphosphate kinasechromosome II CDS544995 408 + 0.487745
VCA0621 transcriptional regulator, SorC familychromosome II CDS555529 996 - 0.51004
VCA0635 transcriptional regulator, LysR familychromosome II CDS570592 942 + 0.5138
VCA0642 transcriptional regulator, ArsR familychromosome II CDS577872 318 - 0.477987
VCA0654 sucrose operon repressor ScrR, putativechromosome II CDS588792 993 + 0.470292
VCA0673 transcriptional regulator, LacI familychromosome II CDS608100 1032 + 0.437016
VCA0682 transcriptional regulator UhpAchromosome II CDS617798 627 + 0.470494
VCA0730 hypothetical proteinchromosome II CDS675367 1830 - 0.421311
VCA0756 transcriptional regulator, LysR familychromosome II CDS700580 966 + 0.466874
VCA0767 transcriptional regulator, TetR familychromosome II CDS710616 735 + 0.470748
VCA0768 ATP-dependent RNA helicase, DEAD box familychromosome II CDS711450 1269 - 0.499606
VCA0804 ATP-dependent RNA helicase DeaDchromosome II CDS746491 1992 - 0.506526
VCA0805 exoribonuclease IIchromosome II CDS748796 2037 + 0.507118
VCA0823 ectoine synthasechromosome II CDS769474 417 - 0.460432
VCA0825 L-2,4-diaminobutyric acid acetyltransferasechromosome II CDS771214 522 - 0.48659
VCA0830 transcriptional regulator, LysR familychromosome II CDS775834 975 + 0.478974
VCA0833 transcriptional regulator, LysR familychromosome II CDS778082 879 + 0.466439
VCA0850 response regulatorchromosome II CDS801121 786 - 0.465649
VCA0871 transcriptional regulator, GntR familychromosome II CDS822401 1422 + 0.436709
VCA0876 D-serine deaminase activatorchromosome II CDS829467 945 + 0.383069
VCA0883 hypothetical proteinchromosome II CDS834574 1110 + 0.436036
VCA0888 transcriptional regulator, LuxR familychromosome II CDS841276 762 + 0.442257
VCA0889 transcriptional regulator, LysR familychromosome II CDS842137 939 + 0.502662
VCA0905 conserved hypothetical proteinchromosome II CDS859667 1140 - 0.472807
VCA0917 transcriptional regulator, TetR familychromosome II CDS870338 486 - 0.454733
VCA0926 transcriptional regulator, AraC/XylS familychromosome II CDS879934 1098 - 0.471767
VCA0933 cold shock domain family proteinchromosome II CDS886068 213 + 0.394366
VCA0937 transcriptional regulator, AraC/XylS familychromosome II CDS888345 792 - 0.484848
VCA0940 transcriptional regulator, DeoR familychromosome II CDS891370 762 + 0.480315
VCA0948 conserved hypothetical proteinchromosome II CDS899732 246 + 0.430894
VCA0952 transcriptional regulator, LuxR familychromosome II CDS901426 675 - 0.367407
VCA0955 transcriptional regulator, MarR familychromosome II CDS904127 525 - 0.48381
VCA0958 hypothetical proteinchromosome II CDS906685 1518 + 0.48419
VCA0964 glycine cleavage operon activator, putativechromosome II CDS913349 906 + 0.459161
VCA0982 transcriptional regulator, LysR familychromosome II CDS929998 900 - 0.486667
VCA0990 ATP-dependent RNA helicase, DEAD box familychromosome II CDS944006 1287 - 0.508936
VCA0991 transcriptional regulator, LysR familychromosome II CDS945384 927 - 0.492988
VCA0999 transcriptional regulator, TetR familychromosome II CDS953656 576 + 0.493056
VCA1001 transcriptional regulator, AraC/XylS familychromosome II CDS955133 834 + 0.519185
VCA1005 transcriptional regulator, MarR familychromosome II CDS957933 459 - 0.470588
VCA1020 transcriptional regulator, LysR familychromosome II CDS968221 921 - 0.484256
VCA1047 mannitol operon repressorchromosome II CDS998134 582 + 0.45189
VCA1055 transcriptional regulator, LysR familychromosome II CDS1004468 924 + 0.493506
VCA1058 transcriptional regulator, LysR familychromosome II CDS1009003 906 + 0.503311
VCA1068 transcriptional regulator, AsnC familychromosome II CDS1017946 483 - 0.467909
VCA1074 transcriptional regulator, AraC/XylS familychromosome II CDS1027022 864 - 0.488426
VCA1078 transcriptional regulator, LuxR familychromosome II CDS1031460 960 + 0.470833
VCA1086 response regulatorchromosome II CDS1041477 1707 - 0.458699
VCA1105 DNA-binding response regulatorchromosome II CDS1061510 657 - 0.488584
VCA1114 ParB family proteinchromosome II CDS1070018 972 - 0.477366