TitleGenColors Logo
spacer
Home spacerGenomes
spacerMethods
spacerDocumentation spacerContactspacer spacerLeibniz FLI
spacer
QuickSearch
2024-05-14 01:00:18

Gene list

Applied filters:

COG category: Transcription
Genomic element: chromosome

Number of genes found: 211

Free access
Sort by:

 

Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Geobacillus kaustophilus HTA426, HTA426
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
GK0030 GK0030 transition state regulatorchromosome CDS42957 300 - 0.46
GK0048 GK0048 transcription-repair coupling factorchromosome CDS58574 3534 + 0.516695
GK0059 GK0059 serine/threonine protein kinasechromosome CDS72183 975 + 0.569231
GK0063 GK0063 hypothetical conserved proteinchromosome CDS77299 777 + 0.500643
GK0072 GK0072 hypothetical conserved proteinchromosome CDS84668 222 + 0.5
GK0075 GK0075 transcriptional regulatorchromosome CDS95070 462 + 0.454545
GK0089 GK0089 DNA-directed RNA polymerase sigma-30 factor (sigma-H)chromosome CDS109524 651 + 0.480799
GK0092 GK0092 transcription antitermination factorchromosome CDS110752 534 + 0.462547
GK0150 GK0150 DNA-directed RNA polymerase ECF-type sigma factor (sigma-W)chromosome CDS162033 564 + 0.505319
GK0170 GK0170 transcriptional regulator (AraC/XylS family)chromosome CDS181231 885 + 0.353672
GK0181 GK0181 transcriptional regulatorchromosome CDS190965 225 + 0.502222
GK0185 GK0185 transcriptional regulator (NtrC/NifA family)chromosome CDS193521 1374 - 0.530568
GK0205 GK0205 two-component response regulatorchromosome CDS215095 666 + 0.465465
GK0217 GK0217 transcriptional regulatorchromosome CDS229068 939 + 0.548456
GK0226 GK0226 ATP-dependent RNA helicasechromosome CDS238745 1404 + 0.546296
GK0232 GK0232 hypothetical conserved proteinchromosome CDS243902 282 + 0.507092
GK0234 GK0234 hypothetical conserved proteinchromosome CDS244804 2166 + 0.549861
GK0306 GK0306 lantibiotic biosynthesis protein (response regulator)chromosome CDS334884 699 + 0.374821
GK0322 GK0322 hypothetical proteinchromosome CDS355570 225 - 0.52
GK0325 GK0325 hypothetical conserved proteinchromosome CDS358505 654 - 0.567278
GK0331 GK0331 transcriptional regulatorchromosome CDS364862 672 - 0.52381
GK0351 GK0351 cadmium efflux system accessory protein (cadmium-binding protein)chromosome CDS389710 369 + 0.357724
GK0356 GK0356 hypothetical conserved proteinchromosome CDS395481 417 - 0.553957
GK0364 GK0364 hypothetical proteinchromosome CDS405063 1650 + 0.547273
GK0396 GK0396 transcriptional regulator (GntR family)chromosome CDS441586 726 - 0.520661
GK0431 GK0431 hypothetical conserved proteinchromosome CDS474086 624 + 0.552885
GK0434 GK0434 two-component response regulatorchromosome CDS476529 633 + 0.527646
GK0438 GK0438 transcriptional activatorchromosome CDS479971 768 + 0.515625
GK0492 GK0492 transcriptional repressor of PBSX geneschromosome CDS539239 366 - 0.5
GK0493 GK0493 transcriptional regulatorchromosome CDS539640 378 - 0.468254
GK0494 GK0494 transcriptional repressor of PBSX geneschromosome CDS540014 363 - 0.46832
GK0495 GK0495 transcriptional regulatorchromosome CDS540553 246 + 0.398374
GK0512 GK0512 bacteriophage-related proteinchromosome CDS546292 996 + 0.472892
GK0523 GK0523 hypothetical conserved proteinchromosome CDS551788 294 + 0.479592
GK0535 GK0535 phage-related proteinchromosome CDS560369 387 + 0.413437
GK0551 GK0551 hypothetical proteinchromosome CDS577320 219 - 0.43379
GK0557 GK0557 hypothetical proteinchromosome CDS581378 318 + 0.544025
GK0558 GK0558 two-component response regulatorchromosome CDS581754 681 - 0.544787
GK0575 GK0575 hypothetical conserved proteinchromosome CDS598127 1872 + 0.39156
GK0580 GK0580 transcriptional regulator (ArsR family)chromosome CDS604869 309 + 0.355987
GK0584 GK0584 cadmium efflux system accessory protein (cadmium-binding protein)chromosome CDS609112 369 + 0.363144
GK0587 GK0587 transcriptional regulatorchromosome CDS613195 348 + 0.376437
GK0590 GK0590 transcriptional regulator (marR family)chromosome CDS615235 447 + 0.353468
GK0597 GK0597 transcriptional regulatorchromosome CDS622142 348 - 0.390805
GK0618 GK0618 transcriptional regulatorchromosome CDS643476 684 + 0.573099
GK0652 GK0652 transcriptional regulatorchromosome CDS671849 606 + 0.438944
GK0664 GK0664 transcriptional regulator (TetR/AcrR family)chromosome CDS682914 573 + 0.504363
GK0702 GK0702 transcriptional regulator (AraC/XylS family)chromosome CDS723890 861 + 0.534262
GK0708 GK0708 transcriptional regulator involved in carbon catabolite controlchromosome CDS731915 1020 + 0.568627
GK0709 GK0709 acetoin operon expression regulatory proteinchromosome CDS733058 1932 + 0.45911
GK0738 GK0738 transcriptional regulator (GntR family)chromosome CDS764694 1380 - 0.47971
GK0739 GK0739 transcriptional repressor of sporulation and degradative enzymes productionchromosome CDS766193 609 + 0.47619
GK0749 GK0749 cadmium efflux system accessory protein (cadmium-binding protein)chromosome CDS774364 372 + 0.540323
GK0862 GK0862 hypothetical conserved proteinchromosome CDS880786 258 + 0.426357
GK0863 GK0863 hypothetical conserved proteinchromosome CDS881161 435 - 0.574713
GK0891 GK0891 transcriptional regulator (LysR family)chromosome CDS914005 915 - 0.432787
GK0908 GK0908 two-component response regulatorchromosome CDS932124 675 - 0.48
GK0927 GK0927 acetyltransferase (GNAT family)chromosome CDS950627 492 + 0.394309
GK0932 GK0932 DNA-directed RNA polymerase sigma factorchromosome CDS955085 741 + 0.464238
GK0958 GK0958 transcriptional regulator (MarR family)chromosome CDS978925 450 + 0.528889
GK0964 GK0964 hypothetical conserved proteinchromosome CDS986864 519 + 0.55106
GK0990 GK0990 transcription antiterminatorchromosome CDS1011237 858 + 0.482517
GK1008 GK1008 hypothetical conserved proteinchromosome CDS1034806 411 + 0.364964
GK1018 GK1018 hypothetical conserved proteinchromosome CDS1045377 597 - 0.554439
GK1031 GK1031 transcriptional regulator (TetR/AcrR family)chromosome CDS1059171 585 + 0.488889
GK1163 GK1163 fibronectin/fibrinogen-binding proteinchromosome CDS1181658 1740 - 0.551724
GK1168 GK1168 DNA-directed RNA polymerase omega subunit (transcriptase omega chain)chromosome CDS1188301 201 + 0.512438
GK1186 GK1186 ATP-dependent DNA helicasechromosome CDS1205478 2049 + 0.576867
GK1192 GK1192 dsRNA-specific ribonucleasechromosome CDS1211574 741 + 0.527665
GK1215 GK1215 transcription pleiotropic repressorchromosome CDS1234645 780 + 0.494872
GK1261 GK1261 hypothetical conserved proteinchromosome CDS1277809 291 + 0.5189
GK1282 GK1282 transcriptional regulator (GntR family)chromosome CDS1299145 732 + 0.516393
GK1328 GK1328 transcriptional repressor of SOS regulonchromosome CDS1353434 624 - 0.552885
GK1356 GK1356 cold shock proteinchromosome CDS1376616 201 - 0.457711
GK1406 GK1406 transcriptional regulator (ArsR family)chromosome CDS1436684 309 + 0.478964
GK1408 GK1408 transcriptional regulator (LysR family)chromosome CDS1437964 897 - 0.487179
GK1413 GK1413 hypothetical proteinchromosome CDS1445186 165 + 0.509091
GK1437 GK1437 transcriptional regulator (Sir2 family)chromosome CDS1479501 729 - 0.587106
GK1465 GK1465 hypothetical conserved proteinchromosome CDS1505579 456 + 0.576754
GK1478 GK1478 hypothetical proteinchromosome CDS1517620 2706 + 0.479305
GK1480 GK1480 transcriptional regulatorchromosome CDS1520704 741 + 0.410256
GK1490 GK1490 transcriptional regulator (mercuric resistance operon regulatory protein)chromosome CDS1530279 390 + 0.515385
GK1498 GK1498 hypothetical conserved proteinchromosome CDS1538807 435 + 0.489655
GK1499 GK1499 transcriptional regulator (IclR family)chromosome CDS1539370 753 + 0.567065
GK1536 GK1536 transcriptional regulator (IclR family)chromosome CDS1575304 795 + 0.539623
GK1544 GK1544 ATP-dependent helicasechromosome CDS1583094 1938 + 0.511868
GK1596 GK1596 transcriptional regulator (TetR/AcrR family)chromosome CDS1626156 627 + 0.496013
GK1605 GK1605 transcriptional regulator (MarR family)chromosome CDS1635302 441 + 0.53288
GK1620 GK1620 transcriptional regulator (GntR family)chromosome CDS1649616 378 + 0.521164
GK1653 GK1653 transcriptional regulator (Sir2 family)chromosome CDS1681368 744 + 0.524194
GK1659 GK1659 transcriptional regulator (TetR/AcrR family)chromosome CDS1686410 627 + 0.508772
GK1686 GK1686 serine/threonine protein kinasechromosome CDS1710683 720 - 0.556944
GK1690 GK1690 two-component response regulatorchromosome CDS1715514 681 + 0.540382
GK1714 GK1714 transcriptional repressor of sporulation and degradative enzymes productionchromosome CDS1741138 633 + 0.341232
GK1716 GK1716 hypothetical conserved proteinchromosome CDS1743550 477 + 0.341719
GK1722 GK1722 hypothetical proteinchromosome CDS1749543 303 + 0.376238
GK1726 GK1726 DNA-directed RNA polymerase ECF-type sigma factorchromosome CDS1752910 486 + 0.393004
GK1738 GK1738 hypothetical conserved proteinchromosome CDS1765169 444 + 0.52027
GK1748 GK1748 hypothetical proteinchromosome CDS1776537 732 + 0.557377
GK1840 GK1840 transcriptional regulator (DeoR family)chromosome CDS1869808 753 - 0.532537
GK1855 GK1855 transcriptional regulator (GntR family)chromosome CDS1882846 714 - 0.508403
GK1860 GK1860 transcriptional regulatorchromosome CDS1887437 306 - 0.509804
GK1864 GK1864 transcriptional regulator (MarR family)chromosome CDS1888785 459 - 0.431373
GK1901 GK1901 transcriptional regulator involved in degradation (LacI family)chromosome CDS1934130 1017 - 0.463127
GK1924 GK1924 hypothetical conserved proteinchromosome CDS1966595 480 + 0.504167
GK1942 GK1942 transcriptional regulator (LacI family)chromosome CDS1982391 1017 - 0.52409
GK1953 GK1953 transcriptional regulatorchromosome CDS1995916 1770 - 0.566667
GK1968 GK1968 transcriptional regulatorchromosome CDS2011386 777 - 0.453024
GK1997 GK1997 repressor in the phenylacetic acid catabolismchromosome CDS2043061 876 - 0.5
GK2015 GK2015 transcriptional regulatorchromosome CDS2061279 729 - 0.377229
GK2034 GK2034 repressor in the phenylacetic acid catabolismchromosome CDS2079623 858 - 0.51049
GK2086 GK2086 two component response regulatorchromosome CDS2127052 630 - 0.374603
GK2104 GK2104 DNA/RNA helicasechromosome CDS2146214 2448 - 0.507353
GK2115 GK2115 transcriptional regulatorchromosome CDS2156950 1014 - 0.586785
GK2117 GK2117 acetyl transferasechromosome CDS2158820 438 + 0.383562
GK2134 GK2134 transcriptional regulatorchromosome CDS2172425 285 - 0.477193
GK2147 GK2147 transcriptional regulatorchromosome CDS2193869 1023 - 0.532747
GK2154 GK2154 transcriptional antiterminator of glycerol uptake operonchromosome CDS2203804 555 - 0.535135
GK2157 GK2157 two-component response regulatorchromosome CDS2205941 675 - 0.534815
GK2176 GK2176 ATP-dependent DNA helicasechromosome CDS2219353 2730 - 0.591209
GK2275 GK2275 transcriptional regulator (GntR family)chromosome CDS2308824 732 - 0.547814
GK2279 GK2279 two-component response regulatorchromosome CDS2313439 726 - 0.53168
GK2290 GK2290 hypothetical conserved proteinchromosome CDS2323355 654 - 0.544343
GK2336 GK2336 hypothetical conserved proteinchromosome CDS2361651 270 + 0.440741
GK2340 GK2340 two-component response regulatorchromosome CDS2367169 687 + 0.496361
GK2355 GK2355 hypothetical conserved proteinchromosome CDS2380207 369 - 0.371274
GK2374 GK2374 two-component response regulatorchromosome CDS2404345 675 - 0.565926
GK2383 GK2383 sigma-L-dependent transcriptional regulatorchromosome CDS2414484 2064 - 0.547965
GK2390 GK2390 arginine repressorchromosome CDS2422773 450 - 0.533333
GK2397 GK2397 transcription termination factorchromosome CDS2429667 393 - 0.562341
GK2416 GK2416 transcriptional regulator (manganese transport regulator)chromosome CDS2443292 426 - 0.492958
GK2422 GK2422 transcriptional repressor of the xylose operonchromosome CDS2450627 1188 - 0.575758
GK2426 GK2426 DNA/RNA helicase (SNF2 family)chromosome CDS2456564 1665 + 0.525526
GK2436 GK2436 hypothetical conserved proteinchromosome CDS2463753 699 + 0.520744
GK2475 GK2475 ATP-dependent RNA helicasechromosome CDS2495822 1311 - 0.53013
GK2506 GK2506 transcriptional repressor of class I heat shock geneschromosome CDS2524870 1035 - 0.530435
GK2535 GK2535 sporulation mother cell-specific RNA polymerase sigma-27 factor precursor (sigma K) (stage IV sporulation protein CB)chromosome CDS2551326 714 - 0.471989
GK2547 GK2547 transcription elongation factorchromosome CDS2560198 477 - 0.522013
GK2565 GK2565 hypothetical conserved proteinchromosome CDS2577577 417 - 0.53717
GK2568 GK2568 transcriptional regulator (TetR/AcrR family)chromosome CDS2579681 861 - 0.507549
GK2578 GK2578 GTP pyrophosphokinase (ppGpp synthetase)chromosome CDS2592456 2199 - 0.515234
GK2669 GK2669 transcriptional regulator (MarR family)chromosome CDS2690034 432 - 0.513889
GK2670 GK2670 transcriptional regulatorchromosome CDS2690686 225 - 0.448889
GK2689 GK2689 transcriptional regulator (TetR/AcrR family)chromosome CDS2709466 588 - 0.515306
GK2700 GK2700 transcriptional regulator (MarR family)chromosome CDS2723240 453 - 0.573951
GK2723 GK2723 hypothetical conserved proteinchromosome CDS2744877 459 - 0.533769
GK2732 GK2732 two-component response regulator (phosphate regulation)chromosome CDS2754081 708 - 0.539548
GK2743 GK2743 transcriptional regulatorchromosome CDS2765884 639 - 0.586854
GK2749 GK2749 hypothetical conserved proteinchromosome CDS2772453 1308 - 0.549694
GK2760 GK2760 hypothetical proteinchromosome CDS2783976 1107 - 0.417344
GK2767 GK2767 hypothetical proteinchromosome CDS2791236 1503 + 0.522289
GK2807 GK2807 acetoin utilization proteinchromosome CDS2835729 633 + 0.527646
GK2810 GK2810 transcriptional regulator involved in carbon catabolite controlchromosome CDS2838428 993 - 0.581067
GK2832 GK2832 transcriptional regulator (DeoR family)chromosome CDS2859957 222 + 0.486486
GK2884 GK2884 hypothetical conserved proteinchromosome CDS2910041 555 - 0.515315
GK2885 GK2885 transcriptional regulator (TetR family)chromosome CDS2910711 627 + 0.518341
GK2895 GK2895 hypothetical conserved proteinchromosome CDS2919678 543 - 0.436464
GK2929 GK2929 transcriptional regulator (Lrp/AsnC family)chromosome CDS2962771 501 - 0.506986
GK3027 GK3027 transcriptional regulatorchromosome CDS3047926 648 - 0.546296
GK3035 GK3035 transcriptional regulator (LysR family)chromosome CDS3056152 915 + 0.572678
GK3039 GK3039 hypothetical proteinchromosome CDS3059991 1176 - 0.518707
GK3044 GK3044 ribonuclease Rchromosome CDS3064744 2277 - 0.545015
GK3059 GK3059 transcriptional regulator (central glycolytic gene regulator)chromosome CDS3079578 1020 - 0.581373
GK3061 GK3061 DNA-directed RNA polymerase sigma-54 factor (sigma-L)chromosome CDS3081017 1308 - 0.588685
GK3089 GK3089 hypothetical conserved proteinchromosome CDS3110697 519 + 0.558767
GK3095 GK3095 transcriptional regulator involved in mercury resistance operonchromosome CDS3118090 423 - 0.472813
GK3139 GK3139 anti-sigma factor repressor of sigma-D-dependent transcription (negative regulator of flagellin synthesis) (anti-sigma-D factor)chromosome CDS3159193 267 - 0.539326
GK3140 GK3140 hypothetical conserved proteinchromosome CDS3159532 411 - 0.569343
GK3150 GK3150 two-component response regulator (extracellular proteinase response regulator)chromosome CDS3170354 675 - 0.536296
GK3153 GK3153 attenuator role for lytABC and lytR expressionchromosome CDS3173097 1008 + 0.491071
GK3179 GK3179 hypothetical conserved proteinchromosome CDS3205395 609 - 0.325123
GK3190 GK3190 transcriptional regulatorchromosome CDS3225425 408 + 0.546569
GK3202 GK3202 transcriptional regulator (TetR/AcrR family)chromosome CDS3236185 924 - 0.549784
GK3204 GK3204 fructokinaseschromosome CDS3237449 873 - 0.591065
GK3213 GK3213 transcriptional regulatorchromosome CDS3248897 756 + 0.544974
GK3224 GK3224 transcriptional regulator (ArsR family)chromosome CDS3260672 348 - 0.560345
GK3231 GK3231 transcriptional repressor of the ribose operonchromosome CDS3266756 990 - 0.49899
GK3262 GK3262 DNA/RNA helicase (SNF2 family)chromosome CDS3303421 2760 + 0.576087
GK3275 GK3275 transcriptional regulator (lacI family)chromosome CDS3317534 1014 + 0.539448
GK3324 GK3324 attenuator role for lytABC and lytR expressionchromosome CDS3369979 942 + 0.504246
GK3334 GK3334 transcriptional regulator of sigma-E/sigma-K-dependent gene (stage III sporulation protein D)chromosome CDS3377831 264 - 0.465909
GK3382 GK3382 transcriptional terminatorchromosome CDS3420017 1275 - 0.545882
GK3390 GK3390 DNA-directed RNA polymerase delta subunitchromosome CDS3428694 558 - 0.508961
GK3392 GK3392 transcriptional regulator (TetR/AcrR family)chromosome CDS3432918 633 - 0.494471
GK3424 GK3424 DNA-directed RNA polymerase sigma-37 factor (sigma-B)chromosome CDS3462964 771 + 0.547341
GK3445 GK3445 transcription antiterminatorchromosome CDS3487338 831 - 0.477738
GK3462 GK3462 hypothetical proteinchromosome CDS3505613 1380 - 0.504348
GK3474 GK3474 two-component response regulatorchromosome CDS3520269 714 - 0.487395
GK3491 GK3491 hypothetical conserved proteinchromosome CDS3536930 846 - 0.522459
araR GK1907 arabinose metabolism transcriptional repressorchromosome CDS1944770 1095 - 0.484931
comK GK0678 competence transcription factorchromosome CDS694907 558 + 0.451613
glcK GK2442 glucokinasechromosome CDS2468749 954 - 0.606918
glnR GK1326 transcriptional repressor of glutamine synthetasechromosome CDS1351595 402 + 0.532338
gltC GK1430 transcription activator of glutamate synthase(LysR family)chromosome CDS1467256 912 - 0.548246
nusA GK1260 transcription termination-antitermination factorchromosome CDS1276644 1152 + 0.5625
rpoA GK0133 DNA-directed RNA polymerase alpha subunitchromosome CDS141003 945 + 0.49418
rpoB GK0098 DNA-directed RNA polymerase beta subunitchromosome CDS115138 3573 + 0.542681
rpoC GK0099 DNA-directed RNA polymerase beta' subunitchromosome CDS118803 3600 + 0.554444
rtp GK1735 replication terminator proteinchromosome CDS1762152 375 - 0.501333
sigA GK2482 DNA-directed RNA polymerase major sigma-43 factor (sigma-A)chromosome CDS2502241 1128 - 0.548759
sigD GK1246 DNA-directed RNA polymerase sigma-28 factor (sigma-D)chromosome CDS1260777 756 + 0.546296
sigE GK1127 DNA-directed RNA polymerase sigma-29 factor precursor (sigma-E) (stage II sporulation protein GB)chromosome CDS1147449 720 + 0.498611
sigF GK2308 DNA-directed RNA polymerase sporulation-specific sigma factor (sigma-F) (stage II sporulation protein AC)chromosome CDS2338646 753 - 0.50996
sigG GK1128 DNA-directed RNA polymerase sporulation-specific sigma factor (sigma-G)chromosome CDS1148289 780 + 0.505128
sigX GK2254 DNA-directed RNA polymerase ECF-type sigma factor (sigma-X)chromosome CDS2290114 546 - 0.507326
spo0J GK3489 stage 0 sporulation protein J (antagonist of Soj)chromosome CDS3535181 870 - 0.497701
spoIIE GK0057 stage II sporulation protein E (serine phosphatase)chromosome CDS68934 2481 + 0.515921
spoIIIAH GK2401 stage III sporulation protein AHchromosome CDS2432713 552 - 0.494565
spoVT GK0049 stage V sporulation protein T (transcriptional regulator)chromosome CDS62316 537 + 0.495345
treR GK1745 transcriptional repressor of trehalose operon (GntR family)chromosome CDS1772280 849 - 0.497055
ureG GK1927 urease accessory proteinchromosome CDS1968641 615 - 0.525203