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2024-05-15 23:18:02

Gene list

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COG category: Transcription
Genomic element: chromosome II

Number of genes found: 168

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Vibrio vulnificus YJ016, YJ016
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
VVA0012 transcriptional regulatorchromosome II CDS10912 945 + 0.504762
VVA0019 response regulatorchromosome II CDS17858 771 + 0.508431
VVA0033 transcriptional regulatorchromosome II CDS31137 900 + 0.481111
VVA0042 putative transcription regulatorchromosome II CDS39187 594 + 0.478114
VVA0076 ATP-dependent transcriptional regulatorchromosome II CDS79358 2709 - 0.505353
VVA0083 transcriptional regulatorchromosome II CDS94258 489 + 0.488753
VVA0099 transcriptional regulatorchromosome II CDS114523 1083 - 0.461681
VVA0106 transcriptional regulatorchromosome II CDS123488 876 + 0.502283
VVA0107 transcriptional regulatorchromosome II CDS124392 942 - 0.473461
VVA0113 DNA-binding response regulatorchromosome II CDS130102 657 - 0.499239
VVA0123 transcriptional regulatorchromosome II CDS138936 1005 + 0.506468
VVA0130 transcriptional regulatorchromosome II CDS145812 1023 + 0.489736
VVA0138 transcriptional regulatorchromosome II CDS157500 1011 - 0.508408
VVA0144 AraC-type DNA-binding domain-containing proteinchromosome II CDS164305 870 - 0.489655
VVA0159 transcriptional regulatorchromosome II CDS184305 657 - 0.496195
VVA0160 transcriptional regulatorchromosome II CDS185085 1008 - 0.549603
VVA0180 transcriptional regulatorchromosome II CDS206093 1533 - 0.5212
VVA0186 DNA-binding HTH domain-containing proteinchromosome II CDS212305 1131 + 0.458886
VVA0189 AraC-type DNA-binding domain-containing proteinchromosome II CDS217094 906 + 0.462472
VVA0194 putative transcriptional regulatorchromosome II CDS221201 384 - 0.515625
VVA0202 transcriptional regulatorchromosome II CDS232947 822 + 0.368613
VVA0204 transcriptional regulatorchromosome II CDS234782 879 + 0.498294
VVA0215 transcriptional regulatorchromosome II CDS248538 894 + 0.46868
VVA0219 transcriptional regulatorchromosome II CDS252565 915 + 0.511475
VVA0224 transcriptional regulatorchromosome II CDS258474 606 + 0.462046
VVA0226 transcriptional regulatorchromosome II CDS259886 903 + 0.496124
VVA0232 hypothetical proteinchromosome II CDS264984 759 + 0.44664
VVA0237 putative transcriptional regulatorchromosome II CDS274274 1434 - 0.509763
VVA0249 putative DNA-binding response regulatorchromosome II CDS289527 705 - 0.482269
VVA0252 transcriptional regulatorchromosome II CDS291407 903 + 0.487265
VVA0254 transcriptional regulatorchromosome II CDS293201 918 + 0.494553
VVA0265 transcriptional regulatorchromosome II CDS300973 450 + 0.426667
VVA0272 AraC-type DNA-binding domain-containing proteinchromosome II CDS311903 888 - 0.448198
VVA0284 transcriptional regulatorchromosome II CDS325150 891 - 0.464646
VVA0298 transcriptional regulatorchromosome II CDS337458 912 - 0.502193
VVA0311 hypothetical proteinchromosome II CDS349123 534 - 0.368914
VVA0321 transcriptional regulatorchromosome II CDS359000 945 + 0.479365
VVA0325 putative fimbrial protein Z, transcriptional regulatorchromosome II CDS363424 588 + 0.45068
VVA0327 putative fimbrial protein Z, transcriptional regulatorchromosome II CDS365499 600 - 0.42
VVA0339 conserved hypothetical proteinchromosome II CDS394710 351 + 0.450142
VVA0343 histone acetyltransferase HPA2chromosome II CDS398224 501 - 0.46507
VVA0356 predicted transcriptional regulatorchromosome II CDS415556 804 + 0.483831
VVA0360 DNA and RNA helicasechromosome II CDS419351 1344 + 0.469494
VVA0382 DNA-binding HTH domain-containing proteinchromosome II CDS449333 675 + 0.345185
VVA0383 DNA-binding HTH domain-containing proteinchromosome II CDS450202 660 + 0.381818
VVA0403 AraC-type DNA-binding domain-containing proteinchromosome II CDS473406 864 + 0.457176
VVA0418 transcriptional regulatorchromosome II CDS486760 462 + 0.441558
VVA0458 predicted transcriptional regulatorchromosome II CDS524276 1524 - 0.47769
VVA0464 predicted transcriptional regulatorchromosome II CDS530558 687 - 0.491994
VVA0466 transcriptional regulatorchromosome II CDS531656 924 - 0.487013
VVA0468 AraC-type DNA-binding domain-containing proteinchromosome II CDS533382 927 - 0.489752
VVA0472 putative transcriptional regulatorchromosome II CDS536418 1251 - 0.498002
VVA0473 AraC-type DNA-binding domain-containing proteinchromosome II CDS537671 885 + 0.484746
VVA0480 transcriptional regulatorchromosome II CDS547123 705 + 0.478014
VVA0483 transcriptional regulatorchromosome II CDS550555 879 + 0.493743
VVA0492 hypothetical proteinchromosome II CDS559477 684 - 0.428363
VVA0506 transcriptional regulatorchromosome II CDS574082 597 + 0.460637
VVA0532 conserved hypothetical proteinchromosome II CDS603666 951 + 0.460568
VVA0573 transcriptional regulatorchromosome II CDS644512 1020 + 0.461765
VVA0577 histone acetyltransferase HPA2chromosome II CDS648675 648 + 0.452161
VVA0583 indirect negative regulator of sigma-B activitychromosome II CDS654089 597 + 0.458961
VVA0585 response regulatorchromosome II CDS657880 1137 + 0.468777
VVA0589 transcriptional regulatorchromosome II CDS668174 852 + 0.389671
VVA0613 putative transcriptional regulator CitBchromosome II CDS687701 681 + 0.497797
VVA0622 predicted transcriptional regulatorchromosome II CDS693688 387 - 0.434109
VVA0646 DNA and RNA helicasechromosome II CDS720329 1380 - 0.476812
VVA0655 AraC-type DNA-binding domain-containing proteinchromosome II CDS737287 828 - 0.434783
VVA0656 exoribonuclease IIchromosome II CDS738229 2037 - 0.468827
VVA0657 DNA and RNA helicasechromosome II CDS740601 1926 + 0.490654
VVA0660 transcriptional regulatorchromosome II CDS746032 870 - 0.472414
VVA0669 transcriptional regulatorchromosome II CDS756924 924 + 0.491342
VVA0695 predicted transcriptional regulatorchromosome II CDS786726 699 + 0.476395
VVA0698 transcriptional regulatorchromosome II CDS790019 726 - 0.465565
VVA0708 transcriptional regulatorchromosome II CDS801457 981 + 0.476045
VVA0719 AraC-type DNA-binding domain-containing proteinchromosome II CDS815654 879 + 0.47099
VVA0726 conserved hypothetical proteinchromosome II CDS826530 1776 + 0.447635
VVA0731 DNA and RNA helicasechromosome II CDS832042 1257 + 0.472554
VVA0738 transcriptional regulatorchromosome II CDS838405 906 + 0.474614
VVA0761 transcriptional regulatorchromosome II CDS860142 915 + 0.454645
VVA0782 transcriptional regulatorchromosome II CDS882894 915 + 0.456831
VVA0790 hypothetical proteinchromosome II CDS890172 513 - 0.366472
VVA0798 hypothetical proteinchromosome II CDS894533 513 - 0.366472
VVA0805 conserved hypothetical proteinchromosome II CDS898577 261 + 0.475096
VVA0809 response regulatorchromosome II CDS901849 699 - 0.434907
VVA0819 transcriptional regulatorchromosome II CDS912089 486 - 0.479424
VVA0844 conserved hypothetical proteinchromosome II CDS947828 381 - 0.498688
VVA0866 hypothetical proteinchromosome II CDS964081 645 + 0.412403
VVA0869 predicted transcriptional regulatorchromosome II CDS965796 528 + 0.435606
VVA0901 predicted transcriptional regulatorchromosome II CDS990877 321 - 0.429907
VVA0910 AraC-type DNA-binding domain-containing proteinchromosome II CDS999780 951 - 0.456362
VVA0937 transcriptional regulatorchromosome II CDS1031635 738 + 0.493225
VVA0939 DNA and RNA helicasechromosome II CDS1033259 1338 - 0.480568
VVA0996 conserved hypothetical proteinchromosome II CDS1110336 2169 + 0.437068
VVA0998 transcriptional regulatorchromosome II CDS1113286 588 + 0.437075
VVA1008 transcriptional regulatorchromosome II CDS1121379 879 + 0.448237
VVA1016 putative rsponse regulatorchromosome II CDS1128445 1542 - 0.468223
VVA1044 predicted transcriptional regulatorchromosome II CDS1173701 390 + 0.479487
VVA1052 cold shock proteinchromosome II CDS1181522 213 + 0.384977
VVA1056 transcriptional regulatorchromosome II CDS1183910 585 + 0.452991
VVA1061 response repressor in two-component regulatory system with UhpBchromosome II CDS1188411 621 + 0.504026
VVA1067 cold shock proteinchromosome II CDS1197196 210 + 0.447619
VVA1084 hypothetical proteinchromosome II CDS1212475 411 + 0.462287
VVA1100 transcriptional regulatorchromosome II CDS1226033 1011 - 0.502473
VVA1118 histone acetyltransferase HPA2chromosome II CDS1248204 423 - 0.411348
VVA1120 AraC-type DNA-binding domain-containing proteinchromosome II CDS1249658 831 + 0.488568
VVA1124 transcriptional regulatorchromosome II CDS1252321 462 - 0.469697
VVA1137 transcriptional regulatorchromosome II CDS1262710 888 + 0.474099
VVA1148 transcriptional regulatorchromosome II CDS1274977 864 + 0.496528
VVA1153 transcriptional regulatorchromosome II CDS1280163 630 - 0.48254
VVA1156 transcriptional regulatorchromosome II CDS1283029 417 + 0.479616
VVA1159 DNA and RNA helicasechromosome II CDS1284553 1530 + 0.511111
VVA1171 hypothetical proteinchromosome II CDS1292576 831 - 0.471721
VVA1174 transcription elongation factorchromosome II CDS1295563 408 + 0.485294
VVA1187 response regulatorchromosome II CDS1308978 633 - 0.477093
VVA1198 transcriptional regulatorchromosome II CDS1318718 837 - 0.480287
VVA1205 putative N-acetylmannosamine kinasechromosome II CDS1324356 882 + 0.489796
VVA1217 transcriptional regulatorchromosome II CDS1338683 504 - 0.438492
VVA1234 transcriptional regulatorchromosome II CDS1356129 885 - 0.475706
VVA1238 transcriptional regulatorchromosome II CDS1359791 942 - 0.494692
VVA1240 transcriptional regulatorchromosome II CDS1360735 450 - 0.482222
VVA1245 putative transcriptional regulatorchromosome II CDS1363481 1476 - 0.523713
VVA1247 putative response regulatorchromosome II CDS1367212 669 - 0.464873
VVA1249 hypothetical proteinchromosome II CDS1369059 1011 - 0.476756
VVA1253 conserved hypothetical proteinchromosome II CDS1373784 909 + 0.482948
VVA1260 transcriptional regulatorchromosome II CDS1385053 900 - 0.467778
VVA1266 predicted transcriptional regulatorchromosome II CDS1393984 756 + 0.456349
VVA1322 response regulatorchromosome II CDS1464399 651 + 0.509985
VVA1330 transcriptional regulatorchromosome II CDS1475856 1074 - 0.492551
VVA1342 sigma-54 dependent transcriptional regulatorchromosome II CDS1487864 1833 + 0.488271
VVA1346 transcriptional regulatorchromosome II CDS1493958 915 + 0.510383
VVA1348 DNA-binding HTH domain-containing proteinchromosome II CDS1495992 825 + 0.498182
VVA1352 transcriptional regulatorchromosome II CDS1500934 831 + 0.405535
VVA1358 transcriptional regulatorchromosome II CDS1506642 897 + 0.503902
VVA1363 predicted transcriptional regulatorchromosome II CDS1510943 357 - 0.470588
VVA1367 putative transcriptional regulatorchromosome II CDS1513708 942 + 0.469214
VVA1368 putative transcriptional regulatorchromosome II CDS1514586 984 + 0.48374
VVA1396 transcriptional regulatorchromosome II CDS1549256 648 + 0.464506
VVA1402 transcriptional regulatorchromosome II CDS1553615 843 + 0.443654
VVA1411 hypothetical proteinchromosome II CDS1564551 504 - 0.501984
VVA1423 AraC-type DNA-binding domain-containing proteinchromosome II CDS1577704 807 + 0.484511
VVA1425 predicted transcriptional regulatorchromosome II CDS1580144 468 - 0.497863
VVA1430 histone acetyltransferase HPA2chromosome II CDS1585452 456 + 0.5
VVA1441 AraC-type DNA-binding domain-containing proteinchromosome II CDS1592265 780 - 0.505128
VVA1452 transcriptional regulatorchromosome II CDS1600794 948 + 0.509494
VVA1457 DNA and RNA helicasechromosome II CDS1604317 1209 + 0.46402
VVA1468 conserved hypothetical proteinchromosome II CDS1613120 306 + 0.457516
VVA1473 response regulatorchromosome II CDS1620719 1095 + 0.478539
VVA1484 putative two component response regulator transcription regulator proteinchromosome II CDS1634462 696 + 0.524425
VVA1487 transcriptional regulatorchromosome II CDS1636493 861 - 0.53194
VVA1507 transcriptional regulatorchromosome II CDS1656970 966 + 0.5
VVA1518 transcriptional regulator of sugar metabolismchromosome II CDS1667896 792 - 0.525253
VVA1520 transcriptional regulator of sugar metabolismchromosome II CDS1669016 771 - 0.470817
VVA1522 AraC-type DNA-binding domain-containing proteinchromosome II CDS1670891 762 - 0.502625
VVA1526 transcriptional regulatorchromosome II CDS1673404 942 + 0.507431
VVA1562 AraC-type DNA-binding domain-containing proteinchromosome II CDS1708818 903 + 0.467331
VVA1564 transcriptional regulatorchromosome II CDS1710699 936 - 0.476496
VVA1567 AraC-type DNA-binding domain-containing proteinchromosome II CDS1714177 819 - 0.496947
VVA1573 conserved hypothetical proteinchromosome II CDS1718626 720 + 0.393056
VVA1583 putative transcriptional regulator proteinchromosome II CDS1727801 945 - 0.396825
VVA1585 transcriptional regulatorchromosome II CDS1729521 114 + 0.535088
VVA1587 DNA and RNA helicasechromosome II CDS1729873 1311 - 0.50267
VVA1589 transcriptional regulatorchromosome II CDS1732629 792 - 0.469697
VVA1598 transcriptional regulatorchromosome II CDS1741810 927 - 0.498382
VVA1603 transcriptional regulator of sugar metabolismchromosome II CDS1746529 774 - 0.481912
VVA1638 transcriptional regulatorchromosome II CDS1790836 495 - 0.476768
VVA1645 AraC-type DNA-binding domain-containing proteinchromosome II CDS1798045 927 - 0.473571
VVA1666 transcriptional regulatorchromosome II CDS1818947 849 - 0.518257
VVA1695 predicted transcriptional regulatorchromosome II CDS1853656 975 - 0.492308