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2024-05-14 11:52:20

Gene list

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COG category: Transcription
Genomic element: chromosome I

Number of genes found: 189

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Vibrio vulnificus YJ016, YJ016
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
VV0026 transcriptional regulatorchromosome I CDS23849 966 + 0.521739
VV0034 transcriptional activator IlvYchromosome I CDS38276 924 - 0.415584
VV0039 transcriptional regulatorchromosome I CDS45640 582 - 0.448454
VV0052 putative RNA polymerase ECF-type sigma factorchromosome I CDS62933 573 - 0.483421
VV0054 conserved hypothetical proteinchromosome I CDS64970 1335 - 0.510861
VV0057 gluconate utilization system Gnt-I transcriptional repressorchromosome I CDS68267 1068 + 0.515918
VV0069 transcriptional regulatorchromosome I CDS80299 465 - 0.490323
VV0099 predicted transcriptional regulatorchromosome I CDS111148 336 + 0.485119
VV0115 RNA polymerase sigma-32 factorchromosome I CDS123253 858 + 0.490676
VV0123 SOS-response transcriptional repressorchromosome I CDS130780 624 + 0.496795
VV0127 transcriptional regulatorchromosome I CDS133943 837 + 0.489845
VV0135 putative transcriptional regulatorchromosome I CDS144067 1245 - 0.438554
VV0142 predicted transcriptional regulatorchromosome I CDS153557 207 - 0.434783
VV0144 conserved hypothetical proteinchromosome I CDS154392 1383 + 0.396963
VV0205 predicted acetyltransferasechromosome I CDS217628 927 + 0.515642
VV0234 transcriptional accessory proteinchromosome I CDS240147 2292 - 0.539267
VV0235 transcription elongation factorchromosome I CDS242599 558 + 0.505376
VV0236 transcriptional regulator OmpRchromosome I CDS243345 732 + 0.5
VV0239 RecG-like helicasechromosome I CDS247209 2082 - 0.534582
VV0241 guanosine-3',5'-bis(diphosphate)3'-pyrophosphohy drolasechromosome I CDS250232 2040 - 0.514706
VV0242 DNA-directed RNA polymerase, omega subunitchromosome I CDS252387 273 - 0.501832
VV0262 conserved hypothetical proteinchromosome I CDS272326 258 + 0.546512
VV0282 transcriptional regulatorchromosome I CDS292767 591 - 0.472081
VV0297 putative KDO kinase WavCchromosome I CDS305882 711 + 0.459916
VV0331 hypothetical proteinchromosome I CDS340797 438 - 0.479452
VV0399 DNA-directed RNA polymerase, alpha subunitchromosome I CDS396303 993 + 0.46425
VV0448 DNA-directed RNA polymerase specialized sigma subunitchromosome I CDS437006 1464 - 0.476776
VV0460 predicted transcriptional regulatorchromosome I CDS446181 255 + 0.45098
VV0466 arginine repressorchromosome I CDS453286 633 - 0.434439
VV0493 transcriptional regulatorchromosome I CDS477399 960 + 0.476042
VV0499 transcriptional regulatorchromosome I CDS485544 663 - 0.45098
VV0501 transcriptional regulator of sugar metabolismchromosome I CDS488217 762 + 0.490814
VV0503 mannitol operon repressorchromosome I CDS490982 543 - 0.440147
VV0515 predicted transcriptional regulatorchromosome I CDS503386 207 + 0.468599
VV0526 transcriptional regulator of sugar metabolismchromosome I CDS509345 918 - 0.411765
VV0536 transcriptional regulator of sugar metabolismchromosome I CDS525048 819 + 0.369963
VV0550 transcriptional regulatorchromosome I CDS535254 810 - 0.444444
VV0561 RNA polymerase sigma factor RpoDchromosome I CDS542525 1932 - 0.465321
VV0630 transcriptional regulatorchromosome I CDS618625 846 - 0.458629
VV0646 aerobic respiration control protein FexAchromosome I CDS642144 717 - 0.476987
VV0660 DNA and RNA helicasechromosome I CDS656526 1326 - 0.499246
VV0670 sigma-54 dependent transcriptional regulatorchromosome I CDS667503 1350 + 0.465185
VV0682 transcriptional activatorchromosome I CDS680636 891 + 0.443322
VV0683 transcriptional activatorchromosome I CDS681655 297 + 0.410774
VV0691 response regulatorchromosome I CDS690374 729 - 0.493827
VV0707 Trp operon repressorchromosome I CDS707062 309 + 0.443366
VV0723 DNA-binding response regulator PhoBchromosome I CDS726823 690 + 0.482609
VV0736 transcriptional regulatorchromosome I CDS741262 948 - 0.42827
VV0740 transcriptional regulatorchromosome I CDS744870 906 + 0.445916
VV0754 predicted transcriptional regulatorchromosome I CDS760084 552 + 0.478261
VV0780 transcriptional regulatorchromosome I CDS789622 987 + 0.469098
VV0797 predicted transcriptional regulatorchromosome I CDS801777 483 - 0.426501
VV0810 predicted transcriptional regulatorchromosome I CDS813042 195 + 0.441026
VV0842 transcriptional regulatorchromosome I CDS845909 888 + 0.501126
VV0849 hypothetical proteinchromosome I CDS854148 465 - 0.473118
VV0860 predicted transcriptional regulatorchromosome I CDS865708 486 + 0.460905
VV0865 transcription termination factorchromosome I CDS869830 468 + 0.470085
VV0878 transcriptional regulatorchromosome I CDS879651 924 + 0.469697
VV0894 trehalose operon repressorchromosome I CDS895884 948 + 0.484177
VV0956 negative regulator FlgM of flagellin synthesischromosome I CDS955700 327 - 0.461774
VV0999 transmembrane transcription activator ToxRchromosome I CDS994445 873 - 0.429553
VV1006 transcription antiterminatorchromosome I CDS1003488 507 + 0.443787
VV1010 N-acetylglucosamine repressorchromosome I CDS1007640 1215 - 0.463374
VV1048 Rad3-related DNA helicasechromosome I CDS1050972 1920 + 0.492188
VV1060 transcriptional regulatorchromosome I CDS1061767 945 + 0.503704
VV1064 putative two-component response regulatorchromosome I CDS1065611 669 + 0.475336
VV1090 DNA-binding response regulator GltRchromosome I CDS1092951 729 + 0.504801
VV1124 transcriptional regulatorchromosome I CDS1133011 591 - 0.463621
VV1134 transcriptional regulatorchromosome I CDS1142048 462 + 0.4329
VV1233 response regulatorchromosome I CDS1246448 645 + 0.43876
VV1290 transcriptional regulatorchromosome I CDS1310984 1308 + 0.461774
VV1318 cys regulon transcriptional activatorchromosome I CDS1343746 1005 + 0.440796
VV1321 leucine-responsive regulatory proteinchromosome I CDS1347408 495 + 0.416162
VV1366 putative transcriptional regulatorchromosome I CDS1390250 876 - 0.47032
VV1391 transcriptional regulatorchromosome I CDS1415038 1089 - 0.490358
VV1392 phage shock protein Achromosome I CDS1416306 672 + 0.443452
VV1394 phage shock protein Cchromosome I CDS1417189 420 + 0.457143
VV1407 transcriptional regulatorchromosome I CDS1434810 1530 - 0.496078
VV1422 DNA-binding response regulatorchromosome I CDS1449559 660 - 0.475758
VV1425 DNA or RNA helicasechromosome I CDS1450705 1743 - 0.485944
VV1435 transcriptional regulatorchromosome I CDS1465736 690 + 0.444928
VV1441 transcriptional regulatorchromosome I CDS1473973 864 - 0.444444
VV1446 regulator of competence-specific geneschromosome I CDS1480157 588 + 0.404762
VV1461 hypothetical proteinchromosome I CDS1497140 570 + 0.489474
VV1469 conserved hypothetical proteinchromosome I CDS1506753 393 - 0.452926
VV1485 transcriptional regulatorchromosome I CDS1522023 870 + 0.471264
VV1504 cold shock proteinchromosome I CDS1537783 213 + 0.399061
VV1508 transcriptional regulator of sugar metabolismchromosome I CDS1541668 774 - 0.507752
VV1517 putative response regulatorchromosome I CDS1552808 636 + 0.418239
VV1528 transcriptional regulatorchromosome I CDS1565235 696 + 0.5
VV1534 histone acetyltransferase HPA2chromosome I CDS1574114 480 + 0.45625
VV1562 AraC-type DNA-binding domain-containing proteinchromosome I CDS1608422 810 - 0.445679
VV1576 transcriptional regulatorchromosome I CDS1620017 426 - 0.438967
VV1590 AraC-type DNA-binding domain-containing proteinchromosome I CDS1632433 885 - 0.463277
VV1598 DNA-binding HTH domain-containing proteinchromosome I CDS1640966 1188 - 0.465488
VV1604 response regulator of citrate/malate metabolismchromosome I CDS1649451 687 + 0.486172
VV1691 NAD-dependent protein deacetylasechromosome I CDS1743618 738 - 0.48374
VV1719 rOK family proteinchromosome I CDS1774908 969 - 0.472652
VV1744 hypothetical proteinchromosome I CDS1795832 474 - 0.390295
VV1755 histone acetyltransferase HPA2chromosome I CDS1804043 456 - 0.383772
VV1798 putative acetyltransferasechromosome I CDS1837222 480 - 0.433333
VV1821 hypothetical proteinchromosome I CDS1849229 603 - 0.358209
VV1879 putative acetyltransferasechromosome I CDS1888565 480 - 0.433333
VV1893 putative acetyltransferasechromosome I CDS1897712 465 - 0.367742
VV1904 putative acetyltransferasechromosome I CDS1904853 465 - 0.369892
VV1908 hypothetical proteinchromosome I CDS1906605 429 - 0.400932
VV1928 putative acetyltransferasechromosome I CDS1919990 444 - 0.391892
VV1948 histidine utilization repressorchromosome I CDS1936414 708 + 0.475989
VV1976 hypothetical proteinchromosome I CDS1970933 633 - 0.477093
VV1981 conserved hypothetical proteinchromosome I CDS1979184 807 - 0.408922
VV2061 transcriptional regulatorchromosome I CDS2061274 918 + 0.480392
VV2075 transcriptional regulator TyrRchromosome I CDS2078973 1545 - 0.48932
VV2082 guanylate cyclase-related proteinchromosome I CDS2088519 558 - 0.46595
VV2087 hypothetical proteinchromosome I CDS2094942 468 + 0.433761
VV2092 GntR-family regulatory proteinchromosome I CDS2099729 1407 - 0.481166
VV2104 transcriptional regulatorchromosome I CDS2112867 486 + 0.483539
VV2105 transcriptional regulatorchromosome I CDS2113427 639 - 0.467919
VV2121 fatty acid metabolism regulator proteinchromosome I CDS2130736 888 - 0.418919
VV2136 transcriptional activator MetRchromosome I CDS2149835 912 + 0.486842
VV2149 AraC-type DNA-binding domain-containing proteinchromosome I CDS2164953 840 - 0.508333
VV2150 hypothetical proteinchromosome I CDS2166014 531 - 0.403013
VV2153 hypothetical proteinchromosome I CDS2167567 333 + 0.396396
VV2181 putative L-fucose operon activatorchromosome I CDS2191689 732 - 0.340164
VV2200 DNA or RNA helicasechromosome I CDS2204823 2793 + 0.463659
VV2210 hypothetical proteinchromosome I CDS2220890 3243 - 0.434474
VV2215 conserved hypothetical proteinchromosome I CDS2233016 864 + 0.416667
VV2219 AraC-type DNA-binding domain-containing proteinchromosome I CDS2236597 732 + 0.269126
VV2233 AraC-type DNA-binding domain-containing proteinchromosome I CDS2254984 771 - 0.277562
VV2241 conserved hypothetical proteinchromosome I CDS2263437 840 + 0.460714
VV2248 transcriptional regulatorchromosome I CDS2271404 927 + 0.432578
VV2250 predicted transcriptional regulatorchromosome I CDS2272573 222 - 0.486486
VV2261 predicted transcriptional regulatorchromosome I CDS2280170 192 - 0.489583
VV2297 conserved hypothetical proteinchromosome I CDS2315382 1074 + 0.476723
VV2303 DNA-binding response regulator TorRchromosome I CDS2324798 714 - 0.462185
VV2305 transcriptional regulatorchromosome I CDS2326705 1005 + 0.466667
VV2306 conserved hypothetical proteinchromosome I CDS2328110 594 + 0.451178
VV2316 conserved hypothetical proteinchromosome I CDS2337108 249 + 0.39759
VV2324 cold shock-like protein CspDchromosome I CDS2345935 231 + 0.463203
VV2329 ATP-dependent helicase, DinG familychromosome I CDS2351617 2112 + 0.458807
VV2365 transcription-repair coupling factorchromosome I CDS2393284 3462 + 0.500289
VV2405 putative DNA-binding response regulatorchromosome I CDS2435137 801 + 0.47191
VV2418 transcriptional regulatorchromosome I CDS2446034 888 + 0.46509
VV2442 RNA polymerase sigma-70 factor, ECF subfamilychromosome I CDS2477445 576 + 0.432292
VV2464 polar Flagellar-specific RNA polymerase sigma factor FliAchromosome I CDS2497793 738 - 0.436314
VV2599 RNA polymerase sigma-70 factor, ECF subfamilychromosome I CDS2625120 594 - 0.461279
VV2618 transcriptional regulatorchromosome I CDS2648798 897 + 0.503902
VV2625 transcriptional regulator of sugar metabolismchromosome I CDS2654471 795 + 0.483019
VV2633 transcriptional regulatorchromosome I CDS2663103 1002 + 0.508982
VV2640 evolved beta-D-galactosidase, operon repressorchromosome I CDS2670852 1017 + 0.497542
VV2648 LysR-like transcriptional regulatorchromosome I CDS2683744 906 - 0.523179
VV2695 transcriptional regulatorchromosome I CDS2733981 414 - 0.471014
VV2709 n utilization substance protein Achromosome I CDS2748976 1488 - 0.459005
VV2718 transcription elongation factorchromosome I CDS2757444 498 - 0.435743
VV2749 sugar diacid utilization regulatorchromosome I CDS2798147 1269 + 0.447597
VV2770 SmcR-like protein VvpRchromosome I CDS2823613 618 + 0.470874
VV2774 pyruvate dehydrogenase complex repressorchromosome I CDS2830678 768 - 0.472656
VV2808 DNA-directed RNA polymerase, sigma subunitchromosome I CDS2867916 993 - 0.443102
VV2821 GTP pyrophosphokinasechromosome I CDS2878393 2226 - 0.496855
VV2831 dsRNA-specific ribonucleasechromosome I CDS2891217 780 - 0.475641
VV2838 DNA-directed RNA polymerase specialized sigma subunitchromosome I CDS2896919 579 - 0.44905
VV2854 transcriptional regulatorchromosome I CDS2910131 915 - 0.462295
VV2869 putative transcriptional regulatorchromosome I CDS2924791 612 + 0.495098
VV2896 transcriptional regulatorchromosome I CDS2956497 996 - 0.453815
VV2914 histone acetyltransferase HPA2chromosome I CDS2974791 495 + 0.49697
VV2925 RNA polymerase-associated protein HepAchromosome I CDS2983798 2910 - 0.515464
VV2954 DNA-binding HTH domain-containing proteinchromosome I CDS3019881 648 + 0.444444
VV2996 transcriptional regulatorchromosome I CDS3072891 906 - 0.476821
VV3005 predicted transcriptional regulatorchromosome I CDS3084554 612 + 0.477124
VV3009 transcriptional regulator of met regulonchromosome I CDS3090155 318 + 0.446541
VV3013 transcriptional regulatorchromosome I CDS3095049 1008 + 0.506944
VV3021 predicted transcriptional regulatorchromosome I CDS3102369 663 - 0.491704
VV3061 exoribonuclease Rchromosome I CDS3140577 2460 - 0.497561
VV3063 predicted transcriptional regulatorchromosome I CDS3144751 426 - 0.483568
VV3093 transcriptional regulatorchromosome I CDS3176083 636 - 0.454403
VV3113 transcriptional regulator CpxRchromosome I CDS3193486 684 + 0.49269
VV3121 transcriptional regulator, LuxR familychromosome I CDS3202783 648 + 0.49537
VV3139 factor-for-inversion stimulation proteinchromosome I CDS3222672 297 + 0.410774
VV3141 predicted transcriptional regulatorchromosome I CDS3224923 399 - 0.446115
VV3156 regulator of sigma Dchromosome I CDS3237028 495 + 0.436364
VV3158 DNA-directed RNA polymerase, beta subunitchromosome I CDS3237664 4203 - 0.47823
VV3159 DNA-directed RNA polymerase, beta subunitchromosome I CDS3241942 4029 - 0.470836
VV3164 transcription antiterminatorchromosome I CDS3248706 549 - 0.468124
VV3171 conserved hypothetical proteinchromosome I CDS3254774 477 + 0.444444
VV3181 transcription termination factorchromosome I CDS3268885 1284 - 0.478193
VV3183 ATP-dependent RNA helicase RhlBchromosome I CDS3270781 1308 + 0.492355
VV3189 transcriptional regulatorchromosome I CDS3277922 807 + 0.480793
VV3199 transcriptional regulatorchromosome I CDS3286809 942 + 0.498938
VV3245 transcriptional regulatorchromosome I CDS3337477 921 - 0.517915
VV3259 parB family proteinchromosome I CDS3350169 882 - 0.478458