Gene list
Applied filters:
COG category: Transcription
Genomic element: p42f
Number of genes found: 69
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| Rhizobium etli CFN 42, CFN 42 | ||||||||
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| Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
| NA | RHE_PF00306 | probable transcriptional regulator protein, GntR family | p42f | CDS | 344621 | 735 | + | 0.638095 |
| NA | RHE_PF00563 | putative transcriptional regulator protein | p42f | CDS | 629408 | 1137 | + | 0.672823 |
| NA | RHE_PF00095 | probable transcriptional regulator protein, GntR family | p42f | CDS | 96559 | 660 | + | 0.606061 |
| NA | RHE_PF00479 | probable two-component response regulator protein | p42f | CDS | 539948 | 723 | - | 0.616874 |
| NA | RHE_PF00348 | putative acetyltransferase protein | p42f | CDS | 390041 | 837 | + | 0.657109 |
| NA | RHE_PF00429 | probable transcriptional regulator protein | p42f | CDS | 482337 | 522 | + | 0.582375 |
| NA | RHE_PF00344 | probable transcriptional regulator protein, LacI family | p42f | CDS | 385641 | 870 | - | 0.635632 |
| NA | RHE_PF00568 | probable transcriptional regulator protein | p42f | CDS | 635310 | 1239 | + | 0.644068 |
| NA | RHE_PF00052 | probable RNA polymerase sigma-E factor protein (sigma-24), ECF family | p42f | CDS | 54673 | 528 | + | 0.596591 |
| NA | RHE_PF00015 | putative transcriptional regulator protein, LysR family | p42f | CDS | 14842 | 819 | - | 0.60928 |
| NA | RHE_PF00313 | probable transcriptional regulator protein, AraC family | p42f | CDS | 351474 | 1011 | + | 0.676558 |
| NA | RHE_PF00408 | probable transcriptional regulator protein, TetR family | p42f | CDS | 461297 | 630 | + | 0.571429 |
| NA | RHE_PF00433 | putative transcriptional regulator protein, MerR family | p42f | CDS | 485660 | 612 | - | 0.580065 |
| NA | RHE_PF00256 | probable transcriptional regulator protein, LacI family | p42f | CDS | 274051 | 1071 | + | 0.631186 |
| NA | RHE_PF00287 | probable transcriptional regulator protein, TetR family | p42f | CDS | 319840 | 633 | + | 0.592417 |
| NA | RHE_PF00560 | probable transcriptional regulator protein, MerR family | p42f | CDS | 625887 | 435 | + | 0.641379 |
| NA | RHE_PF00087 | probable transcriptional regulator protein, LacI family | p42f | CDS | 87772 | 948 | - | 0.60654 |
| NA | RHE_PF00188 | putative transcriptional regulator protein, GntR family | p42f | CDS | 197951 | 1386 | - | 0.651515 |
| NA | RHE_PF00218 | probable ribose operon transcriptional regulator (repressor) protein, LacI family | p42f | CDS | 231496 | 1104 | + | 0.586957 |
| NA | RHE_PF00530 | probable two-component response regulator protein | p42f | CDS | 594574 | 726 | + | 0.633609 |
| NA | RHE_PF00373 | probable transcriptional regulator protein, TetR family | p42f | CDS | 420739 | 681 | + | 0.629956 |
| NA | RHE_PF00288 | probable transcriptional regulator protein, LacI family | p42f | CDS | 320585 | 1038 | + | 0.632948 |
| NA | RHE_PF00056 | putative RNA polymerase sigma factor protein, ECF family | p42f | CDS | 57722 | 549 | - | 0.608379 |
| NA | RHE_PF00414 | probable transcriptional regulator protein, AraC family | p42f | CDS | 466997 | 999 | + | 0.614615 |
| NA | RHE_PF00311 | probable two-component response regulator protein | p42f | CDS | 350037 | 669 | - | 0.612855 |
| NA | RHE_PF00155 | probable transcriptional regulator protein, MarR family | p42f | CDS | 165065 | 369 | - | 0.623306 |
| NA | RHE_PF00390 | probable transcriptional regulator protein, AraC family | p42f | CDS | 442543 | 1014 | - | 0.623274 |
| NA | RHE_PF00289 | probable transcriptional regulator protein, AraC family | p42f | CDS | 321663 | 1221 | - | 0.579034 |
| NA | RHE_PF00200 | probable transcriptional regulator protein, AsnC family | p42f | CDS | 210637 | 498 | + | 0.64257 |
| NA | RHE_PF00290 | probable transcriptional regulator protein, ROK family | p42f | CDS | 322860 | 1152 | + | 0.615451 |
| NA | RHE_PF00360 | probable transcriptional regulator protein (leucine-responsive), AsnC family | p42f | CDS | 405850 | 477 | - | 0.507338 |
| NA | RHE_PF00145 | probable transcriptional regulator protein, LysR family | p42f | CDS | 152538 | 909 | + | 0.619362 |
| NA | RHE_PF00426 | hypothetical conserved protein | p42f | CDS | 479437 | 549 | + | 0.626594 |
| NA | RHE_PF00220 | hypothetical conserved protein | p42f | CDS | 233212 | 234 | - | 0.615385 |
| NA | RHE_PF00422 | putative RNA polymerase sigma factor protein, ECF family | p42f | CDS | 475398 | 711 | + | 0.637131 |
| NA | RHE_PF00399 | probable transcriptional regulator protein, GntR family | p42f | CDS | 452187 | 717 | - | 0.58159 |
| NA | RHE_PF00435 | probable transcriptional regulator protein, AraC family | p42f | CDS | 487756 | 1005 | - | 0.614925 |
| NA | RHE_PF00367 | probable transcriptional regulator protein, GntR family | p42f | CDS | 415548 | 699 | + | 0.60515 |
| NA | RHE_PF00334 | putative acetyltransferase protein | p42f | CDS | 374848 | 903 | - | 0.611296 |
| NA | RHE_PF00252 | hypothetical protein | p42f | CDS | 269623 | 510 | - | 0.633333 |
| NA | RHE_PF00305 | putative transcriptional regulator protein, LacI family | p42f | CDS | 343261 | 1008 | + | 0.650794 |
| NA | RHE_PF00120 | putative two-component response regulator protein | p42f | CDS | 126812 | 420 | - | 0.545238 |
| NA | RHE_PF00272 | probable transcriptional regulator protein, AsnC family | p42f | CDS | 295763 | 468 | - | 0.566239 |
| NA | RHE_PF00474 | probable transcriptional regulator protein, TetR family | p42f | CDS | 536008 | 540 | + | 0.618519 |
| NA | RHE_PF00332 | probable transcriptional regulator protein, LysR family | p42f | CDS | 372951 | 906 | - | 0.631347 |
| NA | RHE_PF00380 | probable transcriptional regulator protein, GntR family | p42f | CDS | 428555 | 693 | - | 0.616162 |
| NA | RHE_PF00325 | hypothetical conserved protein | p42f | CDS | 367136 | 420 | - | 0.6 |
| NA | RHE_PF00189 | probable transcriptional regulator protein, AsnC family | p42f | CDS | 199438 | 498 | + | 0.636546 |
| NA | RHE_PF00467 | probable transcriptional regulator protein, AraC family | p42f | CDS | 526765 | 918 | + | 0.625272 |
| NA | RHE_PF00235 | probable transcriptional regulator protein, GntR family | p42f | CDS | 250775 | 714 | + | 0.607843 |
| NA | RHE_PF00130 | putative cold shock protein | p42f | CDS | 138429 | 210 | + | 0.533333 |
| NA | RHE_PF00163 | probable transcriptional regulator protein | p42f | CDS | 171608 | 750 | - | 0.593333 |
| NA | RHE_PF00387 | putative transcriptional regulator protein, LysR family | p42f | CDS | 439096 | 888 | - | 0.64527 |
| NA | RHE_PF00009 | probable transcriptional regulator protein, LysR family | p42f | CDS | 9305 | 912 | + | 0.666667 |
| NA | RHE_PF00476 | probable transcriptional regulator protein | p42f | CDS | 537520 | 924 | + | 0.632035 |
| NA | RHE_PF00043 | probable transcriptional regulator protein, GntR family | p42f | CDS | 44455 | 705 | + | 0.612766 |
| NA | RHE_PF00067 | probable transcriptional regulator protein, GntR family | p42f | CDS | 67085 | 759 | + | 0.644269 |
| casR | RHE_PF00169 | calsymin transcriptional regulator, TetR family | p42f | CDS | 178626 | 648 | - | 0.621914 |
| cscR | RHE_PF00046 | sucrose operon repressor, transcriptional regulator protein, LacI family | p42f | CDS | 48021 | 840 | + | 0.675 |
| dadR | RHE_PF00438 | alanine catabolic operon transcriptional regulator protein, AsnC family | p42f | CDS | 491401 | 465 | + | 0.6 |
| nolRf | RHE_PF00226 | transcriptional regulator protein (repressor of nodulation genes), ArsR family | p42f | CDS | 240133 | 354 | + | 0.539548 |
| oxyR | RHE_PF00003 | hydrogen peroxide sensing transcriptional regulator protein, LysR family | p42f | CDS | 2500 | 915 | - | 0.632787 |
| putR | RHE_PF00385 | proline dehydrogenase protein | p42f | CDS | 436880 | 495 | + | 0.591919 |
| raiR | RHE_PF00439 | transcriptional regulator (activator) protein, LuxR family | p42f | CDS | 491883 | 726 | - | 0.599174 |
| repBf1 | RHE_PF00572 | plasmid partitioning protein RepBf1 | p42f | CDS | 640050 | 975 | + | 0.641026 |
| repBf2 | RHE_PF00213 | plasmid partitioning protein RepBf2 | p42f | CDS | 224825 | 1002 | - | 0.643713 |
| repCf2 | RHE_PF00212 | plasmid replication protein RepCf2 | p42f | CDS | 223367 | 1305 | - | 0.62682 |
| rpoI | RHE_PF00462 | RNA polymerase sigma factor protein | p42f | CDS | 521767 | 657 | - | 0.589041 |
| thuR | RHE_PF00211 | trehalosemaltose transcriptional regulator protein, LacI family | p42f | CDS | 222246 | 1014 | + | 0.609467 |
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