TitleGenColors Logo
spacer
Home spacerGenomes
spacerMethods
spacerDocumentation spacerContactspacer spacerLeibniz FLI
spacer
QuickSearch
2024-05-27 16:26:08

Gene list

Applied filters:

COG category: Transcription
Genomic element: chromosome

Number of genes found: 102

Free access
Sort by:

 

Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Methylococcus capsulatus str. Bath, Bath
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA MCA0772 DNA-binding response regulatorchromosome CDS815280 732 - 0.63388
NA MCA1145 conserved domain proteinchromosome CDS1202007 381 + 0.608924
NA MCA2706 transcriptional regulator, AraC familychromosome CDS2890813 1065 + 0.628169
NA MCA2997 aminotransferase, class Ichromosome CDS3170363 1359 - 0.633554
NA MCA1339 mercuric resistance operon regulatory proteinchromosome CDS1424053 408 - 0.651961
NA MCA0260 putative toluene-tolerance proteinchromosome CDS250423 249 + 0.64257
NA MCA2959 prophage MuMc02, peptidase, family S24chromosome CDS3135799 582 + 0.585911
NA MCA1011 ATP-dependent RNA helicase, DEAD/DEAH box familychromosome CDS1060280 1362 + 0.668135
NA MCA2256 transcriptional regulator, TetR familychromosome CDS2445721 624 - 0.621795
NA MCA0993 Rrf2 family proteinchromosome CDS1039600 462 - 0.651515
NA MCA2883 Rrf2 family proteinchromosome CDS3075529 489 + 0.627812
NA MCA1939 DNA-binding response regulatorchromosome CDS2088244 666 - 0.633634
NA MCA2976 DNA binding response regulatorchromosome CDS3151442 555 - 0.607207
NA MCA1807 transcriptional regulator, TetR familychromosome CDS1939342 657 + 0.624049
NA MCA3069 conserved hypothetical proteinchromosome CDS3253876 216 + 0.643519
NA MCA2158 transcriptional regulator, AraC familychromosome CDS2325627 885 - 0.614689
NA MCA0401 putative transcription elongation factorchromosome CDS404950 501 + 0.654691
NA MCA2535 transcriptional regulator, ArsR familychromosome CDS2711598 303 + 0.564356
NA MCA3027 transcriptional regulator, AraC familychromosome CDS3212514 996 - 0.628514
NA MCA1764 DNA-binding response regulatorchromosome CDS1892803 675 + 0.665185
NA MCA2269 transcriptional regulator, LysR familychromosome CDS2464933 903 + 0.674419
NA MCA1574 ATP-dependent RNA helicase, DEAD/DEAH box familychromosome CDS1671149 1500 + 0.635333
NA MCA2045 transcriptional regulator, MarR familychromosome CDS2198498 573 - 0.635253
NA MCA1388 transcriptional regulator, ArsR familychromosome CDS1473135 342 - 0.578947
NA MCA1260 transcriptional regulator, LuxR familychromosome CDS1339919 768 + 0.644531
NA MCA0777 DNA binding response regulator, LuxR familychromosome CDS821027 648 - 0.640432
NA MCA2962 transcriptional regulator, AraC familychromosome CDS3136735 1017 + 0.603736
NA MCA2652 conserved hypothetical proteinchromosome CDS2833646 237 + 0.64557
NA MCA1821 conserved hypothetical proteinchromosome CDS1951966 612 + 0.614379
NA MCA0593 protein phosphatase/kinase family proteinchromosome CDS623850 1788 - 0.686801
NA MCA1780 putative transcriptional activator, Baf familychromosome CDS1910378 741 - 0.673414
NA MCA2330 DNA-binding response regulatorchromosome CDS2525010 687 + 0.641921
NA MCA2456 transcriptional regulator, LysR familychromosome CDS2634723 942 - 0.622081
NA MCA3010 conserved hypothetical proteinchromosome CDS3192837 1272 + 0.656447
NA MCA3006 transcriptional regulator, AbrB familychromosome CDS3186430 231 + 0.688312
NA MCA2812 transcriptional regulator, MarR familychromosome CDS3001909 414 + 0.673913
NA MCA0833 response regulatorchromosome CDS875767 1170 + 0.636752
NA MCA0825 transcriptional regulator, AraC familychromosome CDS867863 870 + 0.532184
NA MCA0413 conserved hypothetical proteinchromosome CDS413786 549 - 0.652095
NA MCA1991 putative ATP-dependent helicasechromosome CDS2140889 1938 - 0.665635
NA MCA0792 cold shock proteinchromosome CDS835417 210 + 0.528571
NA MCA1659 conserved hypothetical protein TIGR00244chromosome CDS1761869 498 - 0.630522
NA MCA0999 transcriptional regulator, LysR familychromosome CDS1046085 891 - 0.690236
NA MCA0246 adenine-specific DNA methyltransferasechromosome CDS240908 651 + 0.606759
NA MCA1523 cold shock proteinchromosome CDS1625835 210 + 0.557143
NA MCA0370 transcriptional regulator, AraC familychromosome CDS374530 846 - 0.652482
NA MCA1032 S1 RNA binding domain proteinchromosome CDS1083865 2208 + 0.668025
NA MCA3005 ATP-dependent RNA helicase, DEAD/DEAH box familychromosome CDS3182749 3639 + 0.663369
NA MCA2506 Rrf2 family proteinchromosome CDS2683110 453 - 0.624724
NA MCA1744 acetyltransferase, GNAT familychromosome CDS1860615 849 + 0.647821
NA MCA1651 hypothetical proteinchromosome CDS1755908 369 - 0.593496
NA MCA0228 response regulatorchromosome CDS225302 426 - 0.629108
NA MCA1892 conserved hypothetical proteinchromosome CDS2035968 1149 + 0.603133
NA MCA1598 transcriptional regulator, TetR familychromosome CDS1705856 720 + 0.606944
NA MCA0122 conserved hypothetical proteinchromosome CDS128160 981 - 0.651376
NA MCA2869 putative S-layer proteinchromosome CDS3062391 1062 + 0.660075
NA MCA0447 sigma-54 dependent DNA-binding response regulatorchromosome CDS459204 942 + 0.660297
NA MCA0004 ParB family proteinchromosome CDS3364 849 + 0.660777
NA MCA0316 transcriptional regulator, TetR familychromosome CDS310664 531 + 0.627119
NA MCA0726 transcriptional regulator, TetR familychromosome CDS764490 606 - 0.615512
NA MCA2642 conserved domain proteinchromosome CDS2826408 759 + 0.662714
NA MCA2336 conserved hypothetical proteinchromosome CDS2530469 567 - 0.620811
NA MCA0551 conserved hypothetical proteinchromosome CDS574465 2670 + 0.647191
NA MCA1627 transcriptional regulator, Sir2 familychromosome CDS1730107 768 - 0.717448
NA MCA2682 prophage LambdaMc01, helicase, SNF2 familychromosome CDS2863366 2778 - 0.62059
NA MCA3039 rubisco operon transcriptional regulatorchromosome CDS3225001 957 - 0.609195
NA MCA0661 ROK family proteinchromosome CDS694018 849 - 0.70318
NA MCA2828 cold shock domain family proteinchromosome CDS3017504 273 + 0.622711
NA MCA0119 acetyltransferase, GNAT familychromosome CDS124746 459 - 0.684096
NA MCA2157 putative ribonuclease BNchromosome CDS2324309 1293 + 0.638824
cpxR MCA2279 DNA-binding response regulatorchromosome CDS2474688 717 - 0.677824
cysB MCA2469 cys regulon transcriptional activatorchromosome CDS2646592 975 - 0.606154
fis MCA1746 DNA-binding protein Fischromosome CDS1862532 291 + 0.597938
greA MCA1851 transcription elongation factor GreAchromosome CDS1986153 477 - 0.616352
hepA MCA2531 RNA polymerase-associated protein HepAchromosome CDS2705323 2850 + 0.652632
hrcA MCA1858 heat-inducible transcription repressor HrcAchromosome CDS1995875 1053 - 0.626781
hypB MCA1602 hydrogenase accessory protein HypBchromosome CDS1708878 852 + 0.664319
kdpE MCA2213 DNA binding response regulator KdpEchromosome CDS2388047 696 - 0.66092
lexA MCA2167 LexA repressorchromosome CDS2340073 609 - 0.668309
metR MCA2261 transcriptional regulator MetRchromosome CDS2454949 942 + 0.665605
mfd MCA1864 transcription-repair coupling factorchromosome CDS2002683 3444 + 0.639954
nifA MCA0764 transcriptional regulator NifAchromosome CDS803938 1536 + 0.621094
nusA MCA1316 N utilization substance protein Achromosome CDS1406517 1500 - 0.617333
nusB MCA1654 N utilization substance protein Bchromosome CDS1757827 597 - 0.628141
nusG MCA1061 transcription antitermination protein NusGchromosome CDS1111530 534 + 0.558052
phoB MCA3105 DNA-binding response regulator PhoBchromosome CDS3292500 699 - 0.612303
ppk MCA1954 polyphosphate kinasechromosome CDS2104553 2358 - 0.613232
recG MCA2025 ATP-dependent DNA helicase RecGchromosome CDS2173712 2076 + 0.651734
relA MCA1920 GTP pyrophosphokinasechromosome CDS2066195 2157 + 0.629578
rho MCA0056 transcription termination factor Rhochromosome CDS57326 1257 - 0.599045
rnc MCA1463 ribonuclease IIIchromosome CDS1554293 693 - 0.613276
rpoA MCA2347 DNA-directed RNA polymerase, alpha subunitchromosome CDS2540462 987 - 0.577508
rpoB MCA1066 DNA-directed RNA polymerase, beta subunitchromosome CDS1114712 4077 + 0.607064
rpoC MCA1067 DNA-directed RNA polymerase, beta' subunitchromosome CDS1118854 4203 + 0.620033
rpoD MCA2994 RNA polymerase sigma-70 factorchromosome CDS3166790 1800 + 0.593333
rpoE MCA1471 RNA polymerase sigma-30 factorchromosome CDS1561445 579 - 0.554404
rpoH MCA0136 RNA polymerase sigma-32 factorchromosome CDS140773 861 + 0.615563
rpoN MCA0741 RNA polymerase sigma-54 factorchromosome CDS780492 1464 - 0.60041
rpoZ MCA2022 DNA-directed RNA polymerase, omega subunitchromosome CDS2170789 282 + 0.595745
scpB MCA2206 segregation and condensation protein Bchromosome CDS2382587 606 - 0.671617
spoT MCA2023 guanosine-3,5-bis(diphosphate)3-pyrophosphohydro lasechromosome CDS2171099 2208 + 0.615489
vacB MCA1976 ribonuclease Rchromosome CDS2125863 2268 - 0.628748