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# Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, Hildenborough

>DVU2819 transcriptional regulator, TetR family
MALGRPPRDRRSEIIEIAGPLFLEHGYQGTSMSRIAAALGGSKGTLYAYF
DSKEALFEAYMEDRVRQRGAAVFNLPPHPADLHDVLRLLGKRYLGLITDE
VSLALVRLLYHEAPRFPEIGRIFYETCILRGRRHLAEYLKRADEHGALRI
PDAEVAAQHFLALCQATLSMPVMLCIKDVITEEETERAVESAVSVFLAAY
AI
>DVU0722 response regulator
MVNDELLFAPEGADSEGREAASGSPWKVLVIDDEEEVHVVTRMVLGDMRF
EGKPIECLSAYSAREGFEKLRDSKDVALVLLDVVMESNQAGLELVHRIRE
ELGNHAVRIILRTGQPGQAPEREVITRYDINDYKHKTELTAQRLFTTVVA
ALRGYRDLRTIERNRRGLERIIHSSRDIFRLQSLPDFMSGVLTQLTSSLS
EEPSSFYAGVSGIAAANGGDHGYQVYSATGRFAECARHSACEALDDTTRG
AIEKALATRESYFTENSFVGYFRTPQGAESVFYVQDDRVINDLDRSLIEI
FAGNVSIALENIHLNQEIVDTQREVVLTLGEVVENRSHEAANHVRRVAEY
AACMARLAGLPEEQVAMLRIASPMHDVGKIGIPDSVLLKPGRLDDAEMAV
MRTHAAIGERILSASTRPIMQAAAIVAGQHHERWDGAGYPRGTSGEDIHI
YGRIVALADVFDALVCRRVYKEPWPRDRVEAHFREQAGTHFDPRLAALLL
DNIQKFYDILKAWPDVVE
>DVU2785 transcriptional regulator, GntR family
MPVFKPARRKRLHEEIVGQIRTLIDEGELKSGDKLPPERRLAELFGVSRH
CLREAIRALEQQRIVTCRLGDGTYVLSGSEENLIEPFAEVIEQRREKLRE
ILELRRLIEPQIASLAAVNATGQDMAELRDALARHRAAIEGGGTGSDEDG
EFHLLIARATRNSVLEEMLVRLHDILSESRDFTLQTPRRRQWAIMTHERI
MRAIELRDAQLAFREMHEHILRVEELFLEWVHQEERP
>DVU2886 transcriptional regulator, AraC family
MQPSHDVRFWRDADLPDLEVKRVVRSSHSYPRHTHDTYVVGAMEEGASYC
LGATRSSAVVAAGQLCLINPGQVHTGEPLRDVLPTFRMFYVEQAWVRRLA
SELTGRDAHEPEFDAIVRADREMLDAFMLCSHAIMRGAERLAKESAMVRA
FSLLLTRGAALRAEPALRRSPASRHAGHMAVLRVREHLSAHLGGNVSLED
LAGATGLSRYHLLRVFRSATGMTPHAYHLQLRVEKAKHLLRSGWTPAEAA
ADTGFADQSHFTNTFRRFVGATPGQYLNG
>DVU2956 sigma-54 dependent transcriptional regulator
MSGKKLPHSGNSLPIEGTVSPQRETLQNGTDFLLLSGVMQRLRVLASQVA
SSDAPVLIHGETGTGKELFARLIHDMGIRAKKPFVAVNCGVHEGELFADK
FFGHEQGAFTGAHRMSQGCFELASEGTLFLDEVGEIPGANQADFLRVLEE
KRFRRIGGQRDIPFQARIVAASNRDLQEMVGQGQFRADLFYRLNVIPVVL
PPLRARKEEVVPLARHFLTHYGDKYHRPGVRFAPETEQALAAYQWPGNVR
ELKNLVERIALLAPEGVLGPEHLPLELRSAAAVEVGVPHEVPEDLSLDRA
RREAEVRVILKAMRATGGNKGEAARLLGVSPRTLRYKFAEYALRF
>DVU2251 DNA-binding protein
MSTQDKPYKEIAPRLAGLRDAVGFSPDDLAAKVGVTAADVLRYESGEVEI
PVSYLTDVARECRVDLTALISGGDAHLQDFTIVRKGQGLSVQRRKDYDYW
NLASRFTNRRMEPFIVRVPAKDESELNFNYHRGQEFIYILEGRMEVRLGD
KVHVLEPGDSMYFSSRIPHALRGLDGADAVFLDVIS
>DVUA0099 HAMP domain protein
MPAMTISLRTKLFLLVACSIALATVPIISFTYRDLRQSNAELEREAFGNV
ITLMEDGIDSRYLNLLSNKVVDVLLRKEQLRRFTQLARATWQDVAQMPPD
VRERFVANWIGRLAEFGVHMDIVDAQGRPRAGTGLLGTVLADPSRTDFKG
RPVRSLLSPVLLPQDGEFAVLEASGGASAVGASVASGTAAAPGAAIVDGL
PLATAQGDTASSVPTGVQADAQADAQTPAPVASAATPATGTAVAPSGAPM
LVYFLPMPDGESVAVSALLLSDIEKQALFSEQQIIRSLQEKFATLKLSGS
GYIALLSGRGEVLAHEGNPLGRSDGTIPADALATARAQGRVEVVSAASSP
LGQAIFRIAYFKALDWYVVSAAPVAEIEAPTNALVRKLSFLAAIAVLVSL
AATLGITARLIAPLRMLTRKAHALSSLDFSAPDAATFAAEGLFTRRSDEV
GQLARAFAFMGEALSRNVRALMETTAAKERIQGELDAARDIQMGILPAPD
ACPVRPGFSAHAFLEPAKEVGGDLYDFLTAPDGRQVFVIGDVSGKGVPAA
LFMAMVVTLCRYAVAQGLSPAEAMMRVNAQLAQNNPGCMFVTLFIAAFDP
QTGVLEYANGGHCQPCVVDCEGTAPPFELEGISGPMVGAFEDVDYEGFTA
TLEEGQTCLVYTDGVTEAMNPALELFDMVRLHDVVAAHRASTPADMLTGV
HEALLAFRGEAEQSDDITMLSFTRRKP
>DVU1754 hypothetical protein
MTREEFDAAFDRIYSITETTTQVALSEVLGIRQSSVSDARKRNSIPGAWL
VTLVDRFSANPAWILTGEGPRYLLPSDSRDEMTLSEETVAKIRAEAIAEG
RRAAINDLNTDDVFTLVRERLPQGTVLRYSGEVTA
>DVU3186 hypothetical protein
MHVAVADVNGDGSFSAAWLLHRLRIAATVAEVSATGNAAGCWRDAMHDEN
GTRQDGLLTIADIARHFGLPESTARYYCKRFAPFMPSVGEGRRRRYRPGA
LEVVEAVLDAMQTARNAAAVEARLAGRFARNVLPLSSASGYDGQPPMRGA
HTPELASVPAETAGMAAIAPSRASVPVAGALLPEAALALLEQQNRTLACI
ADALSSLSARQDELARLVAHARGVEDELAGLRRDVGNLRILLNASEKMQQ
QDLDQLRTWLTRIIDEKRRAARG
>DVU2686 peptidase, S24 family
MERAKSFEAVLERLMVASGAKNDSDLARILGITPQSVSGARKRGEVPPVW
IQSFAEKTGISSDWLFFGRQPEAVAMEPVRVGMLRAGDPIARVVTKSESA
QEEMTPPLAHAGKAHVIECDDCEIMMLPMVEARLSAGNGSFETGANIERR
YAFRTDFLLRKGQPSHMVLMRVDGDSMEPNIMNGDVVLIDQSQRDPRAGK
VYAVGVEDVVYLKMVNAAPGKIVLSSYNAVYPPLEIDARGDLSNGIRIIG
RAVWVGRELN
>DVU3131 transcriptional regulator, putative
MERAQHDHALLSRIAWAYYVNGMTQSDIASWLGTSRVRVNRMLQVCRDEG
YVQIMVHSGKAACFEAEKAMEDRFGLRRAIVIPTPPTPRQLNRNLGHAAG
YYLAGILKNGTSVGMGYAAAASIPRKPAEHLTVVSLYGGLPHSIVINPYE
IVTTIARRVQAEQTFYIAAPMFAPTPETCRLLKSQALFKAVYARALQVDV
ALIGLGELAPDATNVQLGAISHDDVESLERAGAVGEVFGTFVDAEGVPVL
HPRNECFMGPDLEEVRAIPHSIAAAGGVKKTGIIRAALSGGFIDVLVTDE
ETATRLLAQHTEAQA
>DVU0394 radical SAM domain protein
MIFPHPEPQTPRHRILPVFLPFAGCPQRCVFCAQDAQTGQSVEPVADVLR
RVDAILEERARHNRPAVEIAFYGGTFSALPEDDQHACLALAARWRERGMV
VAVRCSTRPDALPPGKAEALAGLGMNLIELGVQTFDDTALAHAGRGCHGD
DALTAARRVRDAGLGLGLQLLPGMPGVTPDIFRADMKVVASLRPDCLRLY
PCLVLEGTGLARLWREGRYGPWDVDTTLDVLADALLLAWGQGIRVIRLGL
AQDEGLRAALLAGPWHPALGQMAKAEALLRHIASQVAYFTARHGHTPHRL
HAPARWRGLLYGQHNRLASRYAALGLTEVVWDDTEDYTLT
>DVU1584 sigma 70 family protein
MTKRPKAQHEDIADEKHVTVVDDVEIIDGPDDSADDTEDTEDFVDEDDVI
DIGDDDHAPDTFHLNAPATVSTGKDSLHLYLREISRFPMLKPEEEYELAK
RVRETGDGDAAFRLVSSHLRLVVKIAMDFQRRWMQNVLDLIQEGNVGLMR
AVNKFDPEKGIKFSYYAAFWIKAYILKFIMDNWRMVKIGTTQAQRKLFYN
LNKERQKLILQGYDPDAATLSERLNVTKEQVVEMEQRLDASDVSLDIPVG
DEGGGASRMDFLPALGPGIEDALSNHEIASMVQNRLQSIIPKLSDKEVDI
LQNRLLSEEPVTLREIGEKYDITRERVRQIEARLLQKIRDHLFKEIKDFS
SDWINQ
>DVU2633 transcriptional regulator, putative
MSGQLHKMWYFPHMNQHEATVTDGDELQQFIAEAIALVGGVRALASIAGV
SERTVYAWKNGERFPSRTNLNRLSEHLEHLSRQGYSPSAPQPHWRALRER
MPGSYAPQQPDDTDRLTEEFVFVDKAEARPSAGGGSLETSARAETRYAFR
LDWVLQKTPTSEGLRMMEVAGRSMENTLHNGDLVLVNERDVHLVEDRVYV
VRVHDEIYVKRFARTPGCYHFRGDNRELAYQDISIDPRDENLDWEVIGRV
LWAGKEL
>DVU2582 transcriptional regulator, TetR family
MKRDTILSTAARLFAERGFNNTPTSLLAREAGVAEGTIFRHFKTKDDIFL
TLIRNVKDQLISDIEKYLEVRAPETSIEKVVSIIKSFYVFVKKNRMEFSL
IFRDAPTRYGERNDNVFLAIKDIYTYLGDYVLQALQEGQRDGSIRADINT
RDTAHMLVSTMAGLVRAIHFQFIEPSDDLLRNVVDNCTNFLKPRA
>DVU3207 RNB-like family protein
MATPSGIVRFPGAGCVVEFMQGNRPQIAWVMEEQGGRLRLFLPNRRETKL
AAARLLPWAGPRYDGERSRDDMVALLEEHRQRRDTREADIQPLELWEMVQ
GEVEQASVEWFAELLGETPGVDEVAAMGRALLGCKTHFKFHPPDFEVYDA
AKVEARMVEMEAARVREALVEAGQAFIKVLWDVHCRRRTMPLPSSSEMPP
AEVAERLATLLRTRMADPDDHDSDSVWKQVTKGLPDDAHMPLHLAAAWGI
VPVHHNFWMDRAGYAPGDEWAIDHVDEIDALMKRVEALREPLVDGTFISI
DSSTTRDIDDAFDISPSPEGGWILRLVLASPVTGWDFDGPLDRAVLRRAT
SIYLPERSHHMMPETLGTDAYSLLAGQDRPALLVTFDIAPDGSLRSTTPA
TGWVRLAANLTYTECEACLTGEGDAGRAAPHADRLALADALARVRQQLRV
AAGAVIIERDDPKVTLEGEGCAVKVHVAPPDETPRAQLLVSEMMILANAA
IASWGAERGITLLHRTQDVGIPREYAGVWNQPHDIARVVKALAPAHLEPV
AKPHAGIAVPAYSPVTSPLRRYPDLVNEAQVIHYLTHGTPRWSREEVEAM
LPLLGARLDAAGQVQRFRPRYWKLFYIRQQGDKAWHEAVVTEENDAFVTI
SLPEVQIFVRGRRSTFGDKVYPGQHFNVRLGKVHPLNNEIQIVDAMEG
>DVU1645 transcriptional regulator, ArsR family
MDTTTQHIEKQAQLFKALGHPSRLRMVHFLKGGARCVCELQELIGSDMST
VSRHLSVLKNAKIVKDEKKGTNVYYSLALPCLSAFLECTYDTPFRRKCCV
ESMGIANGNQEVEG
>DVU0277 transcriptional regulator, AraC family
MRRADTLHRYESRVNRLIDHIVNNLSGPLTLEEMAAVSSFSPFHLHRIFS
TVMGETLAAFIRRVRIERAAVLLLWNPTRSVTDIAFACGFSSSQNLARAF
TRHMGMPPGVYRRCRREEGCGLTPAGAGNDDNGKNGNAGGMGLWHGGDAA
GASGHHLHLAHSLLERSATMDVRIEEMPRFHVAYLRHVGPYTEATIGPVW
GRLMEWAGARGLLRPGVKTLGVSWDDPEVTPPEHCRYDACIVIAPGVEVD
GGCATQEVGGGLYAVYRRPVACGQFTEAWNELFGQWLPTSGMQADDRPCF
ELYNDVMQAPPEGPWDVSICMPVRPL
>DVU1690 transcriptional regulator, TetR family
MTKKEALLQAAKELFGEYGYADTTFKKISERAGVALGLLTHHYGNKEKLF
LAAGLDVLDRFLAGLREATAKATSGHDAVLAFSKAYLDFSIDRTSNWLVL
VRCSPYSDMKTKTDRDIMYEKFNMVPKELEQQIIRGIADGSIRDVPPHET
AQVIISMMVGVNRTRLLTPYAPPRLYEEAIEFISRSIRA
>DVU1144 transcriptional regulator, Cro/CI family
MKDASWEEILSRLNEATETRSDAALAAALGLSHQAIYSAKSKGRIPPAWI
YEAARRYDVSADWLFFGRGRKKVADPDESADPSPTLEKAEVARRLLATRQ
ATPLDVEHDGIIECADCQIMMMPMVEARLSAGTGSFETGANVERRYAFRM
DFLMRKGCPSQMVLMRVAGDSMEPEVKHNDVVLIDQSQLTPRPGALYAVG
VEDMVYLKLINATPGKLVMTSYNAAYPPLEVDARGDLANGIRIIGRAVWV
GRELS
>DVU3142 sigma-54 dependent transcriptional regulator
MHETDPRFLRGIIDTLNEGLVFVGPDGRIRMVNPALERLTGFTRDELVGR
ACSVLQCDACVRQRKDGGAHWCRLFDRKGENRKRCTVRRKDGTVVPVLKN
ARVLTDGQGGVQGAVEIITDLSELVDKERRIEELSRLLGSEEGFAGMVGA
SSAMHRTFRLLERAAESDAPVLLLGASGTGKELAARAVHELGRRRNGPYV
QLNCAALNENLLESELFGHVRGAFTGAVRDRQGRFEAAHGGDLFLDEIGD
LPLPTQVKLLRVLETKRIERVGDNHPREVDVRIIAATNRNLGALVRAGRF
REDLLFRINVIPVTLPALAARREDIPLLAAFFLRAITERDGRKAGGLTPA
ALRHLVAYTWPGNVRELRSAMEYACVVAGGGDIDAEHLPPHIIDGTPECG
GHALAATVAERTGPDAAQEAPADEVRPDAPVRVAGPGAGGGTQGRAGEVG
AVAAIPVVSAVPVVPAVPVVTDSGPDHEMMSVDAHDRVMSLPGTSGEAGT
PPPAMADAFPPTQRELREGEERRQLLTALRRARGNISEAARLLGVYRGTV
RNRMARYGIDLHREVKG
>DVU2799 transcriptional regulator, MarR family
MDQTEELTSLLVEFYERFSSWEQGVVRESGITLPQMHTLEVLGVAGDLRM
KELAEKLGVTTGALTVLVDRLERAGLVARKPNERDRRSIQVGLTVDGRRY
FEEHHKLHCQLSEDIAAALAPEEAPVFMHMLRRIITRL
>DVU0436 transcriptional regulator, TetR family
MLDLAKRSFRKAVEEDRMQGGSRERLLEAAGETFAEKGFHRASLREICTR
AGMNVAMVKYHFGDKMGLYREVLHATFDAAAKARIQRTLVACPRQRLYDF
IHDQLLRVRGGRRPPWYNRLMARELASPSPALDELVARGILPVSRELRGI
VMDLLGEGATDREITLHSLSVVGQSLHHHHARAIIERLYPDLTYTQRDIA
ALAEHIVRFSLDALDAARKRITERAHGAQDNVAERGVLHSGRDVAHPSDA
G
>DVU0854 NirD protein, putative
MTEAHNACCHPSGTAAGHHGAGKASTDMMDAVDRRLLDIIQTGFPIEPRP
YAVLGETLGITECEALARVRALRERKVIRRLGANFDSWKLGFRSTLCAAK
VPEDRIDAFVAEVNRHVNVTHNYLRNHEYNIWFTCICPSWEQVCSLLDGI
TERTGIPILNLPATKLYKIRVDFRMD
>DVU0309 transcriptional regulator, LysR family
MQYSWEQVEAFVRAARLGSFSAAARELGKAQSAVSTAIANLEADLGVNLF
DRAGHLPVLTPEGEALLGDAERLLARGERFGSRAATLATGVEPRLVLAVD
ELAWGPALVDRLTGFAERWPDVEMEFLFGIVGDIALMVAEGRAHMGIMVP
LADPRGRRVYAEEAWRDAESRLAGLDYFPAGAVPALPVVAAGHPLAGRRA
VSPDELEALRQLDITSRGGERPDALSGQVWRVDSYWALRDLVRAGLGWAY
LPESLAASDLDAGRLVRLDLAPAGEVWRWPLYLVRDARRAPGPAARWLLE
ALAKAV
>DVU3313 transcriptional regulator, LysR family
MELRQLRYFVALAEELHFGRAARRVHVSQPPLSQQIRALEEELGARLFDR
TSRRVLLTPEGEAFLEDVRGVLRGLEEAVDRVRGVAQGERGRLRVGFVGS
AVSTRFPAGVAAFRERHPAVRLELRESGTLVQRRAIAEGRLDVGLFRNLG
ETPDDLTTEPFLHDSYILALPERHPLAGRDSVNLADLRDVPLVMYPRPVF
PAAYDAIIEACRSVGFSPRIGQEAVSIGTQKALVAAGTGVAIVPGATRRE
PREGVAYRTIIGPLPDIRLDLAWRKGRDDALLRAFLDAVRPFGMEG
>DVU0257 acetyltransferase, GNAT family
MQSIPCKVVPLTQGHYSAVEAVWEASVRSTHAFLREDDLLTIRARLVSDF
LPAVTLYGVFMEGSLAGFAGTASRKLEMLFIAPYWQGRGLGRRLVESAIR
HEGVAFVDVNEQNPRALAFYRHMGFEVVGRSERDGMGMPYPLLHMMLRHE
HDQK
>DVU2319 transcriptional regulator domain protein
MSRPRQGPDVGISSGIIMLLTVRAESAPLIDFLRTGLAPEGVRVRSIAPD
APAPIEGGALLTTDPEEPGRVPHLCAVLLLDRDTPTPKGRDAPPVLRMPF
SLGALCDVLRAAGCHPLAGPNTLAAGELTLALDTGRVTRDYGILALHPQE
RYLLERLLRQPGRVLHRADIGPWCFDYEAPPRPGQIDVLVSRLRRRLDRN
FERPMLHTMRGVGYVLHP
>DVU0269 transcriptional regulator, rrf2 protein, putative
MRILTNSRYGTRMLLDIALHQRERPVLMKDVAARLSISQKYLEKLSRPLK
EAGLLVSQRGPTGGHMLGRPAVEITVGDVVRVMEGGDELVGCGRDEAACS
HAPGCLTRMIWKECSHAMFARLDAITFDELLRYADQGVKFGDFCPNVLAE
HALTGEHDLCEADGG
>DVU0479 serine/threonine protein kinase, putative
MKIGRYEVCGLLGRGGMGVVYKVRQPVTGRVAALKLLKPADILVDLAGMD
ALREGFLHEATVMASLDHPHVAAVWDVDEAGGLPFFVMEYYCLNLGLLMG
ESYRVEAPTRRLPLERAVRYARQTLEALRRMHHEGIVHRDVKPFNIMVTG
DDAVKLIDFGLSRLRGETRLSPRGVKVGSPYYAPPEQESAPDAVDARADL
YPVGVMLFRMLTGVLPTDEERMKDGRIPRASALSDELDEGWDAFFDTAMA
ADPARRFPDAASMLAALARCEAAWRKQVEATCRLIPEQAAGPGDASDMRH
DAGHESVQAGQTDETGQAGQAGQAGQAVTCEGAPAASGGVRCRPVKVGVH
EARATFALDALWRPASAARQGLEARDDGTVSHAATGLQWETGGCDFPLTR
DEAEAYVEARNALRFAGHDDWRLPTVDELLTLVDAGVTVGDPCVASVFAP
LPDPLWTSDRKSYMASWFVSAAMGFVGWQDDTCRFGVRLVRGGSARCRE
>DVU0569 sigma-54 dependent transcriptional regulator
MKLKLELVFKDRVGIVSDVSSLLAGEGYSIVCMEVERRHDRSHVHIEADG
AGEGAFAALRQRFESMRGLLECREVQTLPAEERENRIKVVLDTIGDGVMS
IDGGGRITSINKVAREAYGCAGEDVTERSLTSLRLPDHGLLDCLHGRELH
DARRELATPLGRLQFFVTRTPIRDGVGRIIGAVEIARDMREIRKLARTLV
DADHVGFDDIVGHHPAIEAAIAFARRVAATDAVIAIRGESGTGKELFARA
MHAESGRKGPFVPINCAALPEQLLESELFGYERGAFTGGRREGKPGLFES
ARGGTVFLDEIGDMPLASQAKILRVMQEQRVRRIGGEAEVPVDARIITAT
NRPLERMVEDGRFRQDLYYRINVLPMHIPPLRERRGDIPLLANHFLQQLA
SRIGGAAPAFTDGALARLRSHEWPGNVRELKNVVERAAILAGGAVVDDQF
ILFSHELGKGVFNAARTASAAGQGDTLKEQVANFEKKIVEDVVRRAPSIR
KAAKILGISHTALLDKMRRHGVILEE
>DVU3167 heme biosynthesis protein, putative
MSRYDDFTEVERAILRIVQSNLPDSLTPYADIAREVGTDEETVLALLRSL
KEEGPIRRFGASIKHQRAGWNHNAMVAWKVDPAIVEEAGTKAAEHPHISH
VYYRPSSAPDWPYELYTMIHGRHATAHMDVIEQLRRETPLEEFAVLESLR
ELKKTSMTYF
>DVU1331 transcriptional regulator, LysR family
MIDYRRLEAFCKVYELRSFSRAGEDLFLSQPTISAHVLALEKDLGMQLLD
RLGRSVLPTPAGDVLYRHAMNAFESLEAAKSELAMLRDEVSGELVLGGST
IPAHHILPPVLGTFLRRHPCVSVKICVGDTEDIMQSVAQGEVMLGLVGDL
RPQPDLHFEAVIDDELVVIAHPQMVEGGVPHAVAELASYPWVMREKGSGT
RSAFLNGLDALGVDWRLFDVVLTVGSTEAVIQYVRAGLGISVTSRIAVAD
ALGRGELVEIPLSDYHPARKFYCIHHARRTLFPSALAFMTALREGARVVA
EDGESHDR
>DVU2836 hypothetical protein
MATRKRHLNQTFDTVVFTARLKSLESALGSTRKVIAERLDIRPQTLKSYI
DGAALPNAKVLASIISEFSVNPYWLLLGSGEMFANETARAVSTEQDPVLR
RLEGVETMLVRHGASPEEIRDALRMALRTLTAAGADDEVSEKPEAAVS
>DVU0030 transcriptional regulator, GntR family
MPPRPPRDGESPFAYHQVERHVTRMIEDGRWRTGDRLPSLRQIATSMGVS
IATVVHAYTELERKGVIEARPRSGHYVGAAISALPTPAAREQALAGPRVV
NRSRLISTVLEAVGNHELVPFGVLCPDTSLLPLKALVRIMGETMRSAPQV
ATGYETVQGNAELRRRIAWRMGECGMDVSAEGLVITTGAVEALYIALRAL
TRPGDIVVIQSPTYYCFLQLLETLGLRAIEAPSSPEKGIDPEAVRHIVDR
HRVACCIFSPNFNNPDGSLTPDDAKREILDILAPRGIHVIEDDVAADLHY
GPVRPSTFSQYDRHGLVTLCSSFSKTVAPGFRVGWMAPGRIFDKAMEVKA
TTNVCCPTPTQMALARYLEQGLLQRHLRRLRTALVRQMEAMRQTIACSFP
EGTSATRPLGGGVLWVRLPEGTDGTELFYRARDAGIAIAPGSIFSTQDSY
TNYVRLGCNGVWDDRMAQGLRTLGELARLCTPEARALAPQGDTTGGCDVR
>DVU1338 conserved hypothetical protein
MNTRWTLALVILLTALLLPLAAAAGRGSVPEAAESIIAQMDPQMLTRLAG
VEGTRGDVSIAVTVPVNLTDFEASSPLARQMAEEIASALVNTGYRVQEIR
KGREVVFRPDGEMLLTRKVDQLASTTVNSVAVLVGTYTVTSRSVRFNMRL
IRTDSNEILSMGTATVPVTEELQPLLADLKGPRKVTPSVGTRLP
>DVU0682 DNA-binding protein, putative
MVARIPYRREHSDQRRCPGPRPGFAARRKALSTFDEVFERIKLATNTRTQ
VELAEVLDIRQSSISDAKRRNSVPSDWYMKLFEKFGLNPDWLKKGSGPMY
LRTDQGYEPLDAPVAGLVLEDPARYGDPDAKSSVATVFAMGCAVDENGVS
QPLTAIAKLAVPQSFAAPGTQIVRVDAGAMEPVIGKGAFVGIDTTQKNIV
SGELYGVFMPFEGVAIKRVFLDAANARFILRTENPTHPEQYLPIDQHADR
IFGRIVWVLQRI
>DVU2644 transcriptional regulator, GntR family
MQGITKQTYSHQITEYIKERILAGEFAPGDKVNEVLLASRLSISRAPIRE
ALQLLVQEGLIVSTPQRGKSIATLTSKEIRNSYFTGGVLEGAAAASTIHM
FTDDDFARLKAVVDSMADCVARDGDMDELATLDTAFHDVIFSRTDNQLLV
ELSRRACQGISKFLLFRYWRTAFTPEEVLRRHKVVLEAMLTRDPVFIEST
IRNHYVDSGRRMARWGTDMMPHP
>DVU2440 hypothetical protein
MEVGAVGTVIDVQVGALEETRKALHEELSVIVGAAAKLTQVVRIERIVAA
ADFASVVATAVAETGRGGRRPAGEPHILSVPGRTGWVMVLHPRLFGPGFD
AHIRHALYWHELTRLVHKMTFPALLRGKVDRERVLMGELYRAFGEYDAAR
KAWAWRDALVRDALHEELSGRAVDDFVRSLAGQAAVALGHGREDMARRLN
DTLRKDGDVAGFLSVMRGMVVQRTVALALAWAGMDHAPDKALEVAGALRD
GLPVAAQPLLSFFRNRHVSGVTDLREGVALLDALWQAWGLHLADGPDGLT
ALPVEPF
>DVU2086 transcriptional regulator, GntR family
MWLPLDVDGPLSLGRQLYERLKQMILDGELAAGARLPSSRALAVELGVSR
NTVLDAYDQLSAEGYLETRHGSGTRVAAGIVSERGEGGANRAPFVIAPAA
VPERPSGVVSFRSGIPALDVFPREEWARTYQRVCAALPDDALRYSAPAGV
WALREAIAGYLRRTRGIRCHAERVMITSGATQGLRIMSRLLQRSGGVVLA
EDPAHAGLREVLEVTGLRVEGVPVDDRGMDTGMLPSAEEARRAGVAFVYV
TPSHQYPLGGILPVQRRQALVRFAREAECLIVEDDYDGEFRHEGSPVGTL
HELAPESVVYLGSFSKVLAPALRLGFAILPARLLAAWHREKLYSDVHTDA
LSQHALASFIGSGALERHIWRMKKLYRRRRAFLVKSLMRHFGDAVGIRGH
ATGLHLVAAFTGVRFDDKVMSELARGGVEATPVHAYALQHGDDHVNELIL
GYAHLSEEAMEQGVRLLKQVLGNAGRVPVG
>DVU1181 response regulator
MQSAPAPATILIIDDDASVRMGLKALLEDEGFYVMDASSGPEGLSMFATS
PPDLVLVDLAMPDMNGRDVVRHLHSADPLVPVIVVSGTGVLEDAVGTLRD
GAWDYVAKPIADTAGFVRLIRRALERAALIAENTAYSNGLEQMVRQRTAE
LEAASSRLHTTLFATVESLSKLTNLKDAYTEAHQCRVAIIATTIGEVLGY
EGERLDGLRVAATLHDIGKLCIPSEFLTKPRGLDHHEMAFLRQHPQFGYE
ILADIPFPSPVADIVLQHHERLDGSGYPAGLRGDAILAEARIIAVADVLE
AICSHRPYRPALPLSYAMSEIESGMGTLFCPQAAGVCLDLVRSDNPRLHA
FLSTAS
>DVU2364 aminotransferase, classes I and II
MQIAKRMDNVQRSYIREILKVTARPDIISFAGGLPHPDSFPVQGVAEAAA
AVLAESGSEALQYSTTEGYLPLREWISARYARQGIEVSPDEILITTGSQQ
ALDLVAKTTIDRGAPVVIERPGYLGAIQCFSFYGAQFRTVDLTPLGVDVE
ALRREAKGARLFYAVPSFQNPSGITYDEPTRREVAAIMAETGCMLVEDNP
YGELRFMGTPVAPIRKWAESPSVLLGSFSKVVSPGLRIGWACAPAELMRH
MVTAKQASDLHTPMFTQRLLHRFLVDNDVDEHIASIRKRYGAQRQCMMDA
IRKHFPECVTVTEPEGGMFLWCGLPEGVTSEHLFHKAIERKVAFVPGCPF
YVDGTDTGFRLNFSNASQDDIVEGIARLGACLTEELAR
>DVU2246 S1 RNA binding domain protein
MTETIPHDSVAHRLAADLGITTAQASAALKLFDEGGTIPFVARYRKEATG
GLDEVALTALRDGCERLRTLDKRRDAIIASMTEREQLTPDLAKALHAATT
LTALEDIYLPFRPKRVTRAAKARERGLAPLAERLLEQRGAQAGQLAAPFV
DEAKGVPDTAAALAGARDIIAETVSEDRATRATLRDIFVRRATLRSKVAR
GKEEQAATYRDHFDRSEHAAAAPAHRLLAMFRGEREELLDVRVRPDDDIA
VGALHRRWLKGRASSAGTDAAEVATALTDAWNRLLAPSLENEFRTALRER
AEAEAIAVFAANLRELLLAPPMGPRRTLALDPGWRTGAKLVCLDAQGALL
HHEVIHPLTGGDRATRAAATLRELCTRHGIEAVAVGNGTAGRETEAFVKS
AGLPPHVTVALVDERGASVYSASEVARAEFPDHDVTVRGAISIGRRLMDP
LAELVKVDPRSLGVGQYQHDVDQNALRRALEEVVASCVNAVGVDVNTASP
ELLAYVSGIGPALAKGIVALRAVNGPFRTRRDLLKVPRLGPKAFEQAAGF
LRVHGGPEPLDASAVHPESYAVVRRMAEDTGCSVPDLMRDATRREALRLE
RYVDDRVGLPTLRDIMSELARPGRDPRPAFEVFAFAEGVNKVDDVQPGME
LPGIVTNVTKFGAFVDIGVHRDGLVHVSQLADRFVRDPAEVVAPGRKVRV
RVLDVDRQRERINLTLKGVPQQD
>DVU3066 DNA-binding protein
MAAEKLGARVRKYREDRGMSREQLSEAAGLTVEFIAALEEDNLYPSIGPL
QKVARALNVRLGTFMDDEVTKDPIVARRGDREADLTMQKARNKRAAFRFH
SLGKGKSDRNMEPFFIEICPEPEEDRKLSSHQGEEFILVTKGRVRVVYGK
EEQVLEPGDTIYYNSIVPHYVGAEGDDPAEIYAVIYYPR
>DVU1519 transcriptional regulator, putative
MAATKRTMKANLINKRAWDSILAKVKDLVEQGMTYSAIGKMLGKSPATVN
RWVTTGVGGDSTPFVNMLQYMEALGLKWGDIVENLEPAACGYGYVRKVQA
KLGAGSSLITNGDLEGMYAFRQDFINEMGGNPESLVMFDVIGASMEPTIP
DGSTVLVNLRDTSIRSGLIYAVRVNDELLVKRLIQEPGRLLCHSDNPTFG
DTVIDGENPNFEVFGRVRWLAKRM
>DVU0145 response regulator
MESELLTHCRILLVDDEDGFRDALIRRLRHRGLHVDEARSGGDALEHLSG
NPADVVLLDIQLGDMDGRDVLRAMRRRGDDAAVIILSGHAYTDIALDAMR
AGASDYLLKPCPVEELLERIENVYERLLEEREAKP
>DVU2588 DNA-binding response regulator
MNILIVEDDATIAATTAQALVDAGNEAMVASTLDEAREKAGSGAWDAIVL
DLMLPDGDGADLLHELRERGDTVPVLVLSARQSVEDRVRHLESGSDDYLT
KPFAISELLARLAALRRRSAGRPMSLTHSGLMLDLVHRKAYRDGCEMDLK
GREFALLLLLMENAGTVVTRNMIVKRVWGYDFMPGSNIIDVQICQLREKT
ERNGAPRVIHTMRGVGYVFGLADAVA
>DVU0057 transcriptional regulator, TetR family
MTQQQQEQGTRERLLEAAAEVFAEHGYEAATVREICRRAGANVAAVNYHF
GGKEMLYASMLKHFMAVCAARHPLDAGTGPDSTPEERLYAFVRNLLYRIM
GDDEAHGKLVAQETIDPSPAFDDIVHEFMLPVRAAVEDVVKAFLGQDAPE
ASVRACAAGIVGQAMFYLQNRSILERLYHDLTYDNEGLDRMAESITRFSL
GGIAAWRFGGGEA
>DVU1674 transcriptional regulator, putative
MQATDIATQQALAAALGVNRSAVTQAKNRDAIPQKWILQLARAYHLAPDW
LEFGKGRQHQPPTSLHDPETVLVPRVKAVLSAGGGSLDVSGGVVENLPFR
YDWLARRGHPAHMVLMNVTGDSMEPGIRHGDTLLIDQSHVTAQTGGVYAF
GYEDSILVKRFGRDADAILLLSDNTAYAPIRIRGDEADLLHVIGKIVWLC
RAVQ
>DVU1745 DNA-binding protein
MRYPEGMALQNKFPILWDCFLQRINDALKATTQEELGRRLGVGKSAITKW
RHGSTRGADLQDFLRYCDVLGIDFCGIINGTPTPTYSPSPFEIALTGVLD
SFLSVHNLTHEKAASSLWPETANGAAKLGSILTAKEPLTPEVLMQLCLLM
EEDPGKLLRLARERVQPEGEQISGNAKSA
>DVU2085 Snf2 family protein
MHDTIPEYIRDGAQDMLAQGGVQKLGLKKEGGTWEIDGSIQSDDFQIYVS
RISLTPSEHRASYVCNCSDSFSGVCRHVAATALKMLSTFDTRPGSDEPAK
PRVEWRQSFRSFFSTALDPEPGKHYLIFRFHPEPGRLTVAFFRARQNKSG
LSTVHNEITLEQIINNPEWCELSPQLVDVAKQVGQFVDYYGHRIEIPDGL
VSWFFWAIRREYYLFWLDTESPCRIENTALGLKLHPRLGDDGLSFDVMLY
REGKPPFSILGGENAATFHGQMPMWVCWNRSFYPVQTSLPPQLVQDLIRQ
HPSIPQEDMSEFLDRVWTRLPSSDLYGQEDFLKLMEPVFQPARYSPKLFL
DEEGSLLTLEIQNVYETAHGEFYLAGPNPDFQTGSYTFEGTTFLIRRHQD
EEAGLITQLSEMRFQPRSSRLWFLEPEEAIAFLLDAYPRLVEKYRVYGEK
ALSRYKVRLSQPVITAKVESNEEEKWFSLDIDVEYDGQKVPIDKIWKAWS
QGKRYVQLKDGSYTSLPETWLERLGHKLQALGLDPDKPPQKQFKQFEAPV
LDSLLDDLPGAETDSFWNSLRDKIRTFREIRAVNAPRGLNATLRGYQMQG
LAYLNFLREYGFGGILADEMGLGKTVQTLSFVQHMVESGKIGPNLIVVPT
SVLPNWEREAQKFVPELKRLIIYGTRREGMFKLIDESDLVVTTYALLRRD
LEELQNHTFNCIILDEAQNIKNPNTITARSVRRIKADMRLCLSGTPIENN
LFELWSLFEFLMPGFLGSQHAFQRGVIKPIKDGDCETLDYLRTRVRPFIL
RRTKSEVAKDLPPKIENTYYCALAEEQAELYTALARKLKEQVLADVDEKG
LAKSQMSILDALLKLRQICCHPRLLKLDMPGFSTNLPSGKFDAFKDMITD
IVEEGHKVLVFSQFVQMLHIIRSWLQISGTPFCYLDGTSKDRFEQVDKFN
NSPDIPIFLISLKAGGTGLNLTSADYVIHYDPWWNPAVESQATDRTHRIG
QTRQVFSYKLICQNTVEEKILKLQDMKRGVAEAIIPGQETWKSLTREDLE
MLFDI
>DVU1402 transcriptional regulator, LysR family
MKDGLPPLNALVAFEAAARLGSITRAARELCVTQAAVSQQVRRLEGHLGL
ALFARGGQGLRLTDEGRRYLDGIAGPLASIRRATDALMAEDTSGVLTVIA
APSFANRWIVPRFNRFYERHPDIDLRIGPAPVAPELGRGVDIIIYHDIGD
RPGTYSMPLMGERIFPVCSPELLDANGGEAASFLRGQLLLRHARDGMGLW
EAWLEKAGLGDEGLRFGPRFDFSYLALAAALDGAGVALGRTLLVAEDLAA
GRLCVPVPLTMVAPRPYWFCCAEAHAERPRVAAFREWLVDEMRRDADVDA
WLQSREAAYIAGRGGVACLGGGGLSPARGSF
>DVU2275 sigma-54 dependent transcriptional regulator
MGVGVAVVDGEGICRFMNTIQRRVDGFSRISVVGRHITSLYVPHELECIP
TIECLRKGEPILKKAYWYKTTNNYLASTVTDFIPLYDAGRKDGVIAFTIW
TGTTAFAEGRKRQPRPPQPKGAAYDFYTFDSIVGQDANLREVIAEARTAA
ATSSPVMIWGESGTGKEVFAQAIHSESDRRQRPFIPVNCAAIPENLLEGI
LFGTVKGAYTDAADKPGLFEEADGGTLLFDELNSMPLGLQAKLLRVLQEK
RVRRLGSHTEVPVDVRIMSILNEEPLQAVEHGVLRRDLFYRLAVVGISVP
PLRERRNDIPLLARMFIDRSELATRPGGPGTVGVNDDVLHMFMHYDWPGN
IRELLHVVEGSLALLGDGPEICPACLPRHFREACHATGSTPATVSDIVTQ
APTLPAPAAAAGETGDAGLYYDYRNIRKSHVVPLKGCLQKYETQCISNVL
RVTGGNVAKAARIMQVTGAGLRYKMKALDISDED
>DVUA0003 hypothetical protein
MPPEATANASPAGQQPKRRRVTLADRLRQASKMQFESPEQIAAREALEKM
NRESALATPGDTDSHGVSSAVTPDKPTTHQHKAVAESAKDAPSPPTVTSP
SPAIEDDLGHDTSAATSARASTGEDATCAASGTTPRDDDAGHPLTGAVTR
DVTTPETRTVTHDTPVTPVTTKATGDCDRHPATTAVTSDTDSETVTATDT
SDAKRHPVSPAATDASNSHPVTADVTPDVTPDSNAHRTTMAVTGDSTVTP
DGELPASSASTREPKTVSSAADRAYTAPHASRGRDAGDDTGHPMTDTVTS
DGTSPPPPLFVPAHGPLTHGAVAATDTAGAATVEEGPAHDVQPMRQAEAS
SAPHASREAPTGTAYAGTEAGSAHGHDRSTAGLATTAEETPCTPCEAPTP
ETAATLHDRSAVNARAMGTEKVTGTERVTPDPTGHPVTAAITVRHDEGPL
PGAETPGVSGAESPHVTPHVTPRVTPRVTPDATQDATPEASGSTLPGATS
DLTGGLTGGPSVTAAGAEADAGTETGAPYARAAASKDQSDATRPGDDIAP
SHAARQAAGISDGATTVSDVTPLSAHDTMSSFVTDDSHGHPMTDNVTTTE
PTVHQAMAHGMAPVVNSPKPEGGVHVRSPLPAHDLAGHMGHSAEQAPQTG
NVTDDASRHGVSAEVTPDMSATAPVTPVTPVIPVRPGTPGPLAGLTTSRT
LLNSTLQVNIYNMVLEAGGAVFTSGGQMAKRFDVAVRSVRRTLDLMETKG
ILSRESGAAGMTLRLLMDPLSVMGIHASGLPAGVIGAVHDAGAVHDGIMG
GHAPYRTGRGPDMPTFPSGSPAAHTPEFVAGHGTGAEGRGGYPAAGMPQP
HAPHPSPSPRDSYGHPSFMHAAPHPVQTSPHLNDQQGRAANPGDMVAPHR
PAAAHQMHGGMVPRHQPGATQTGQAASVSGAGTPGTTAGDAFGVPSGGPG
ADMAFFRERYPHLARAGFGPAQVKQVREALASRDLPDDLVEESLGYAEWE
LEHGTMVDAKGQPIAKPADWVFKSLAMHGCYRRPAGYVDPLEEARARIAE
RIAAQTAHREQLARLREEQEKLEMEALIDAEVERLAAAPDSAEVDELLQG
LPAVLRAKGLESALVQREMRRRLRERLFPEG
>DVU0606 transcriptional regulator, ArsR family/methyltransferase, UbiE/COQ5 family
MSLALQYFKALSDETRLRLIHVLNRHELSVNELVSILEMGQSRVSRHLKI
LTGAGLLTSRRDGLWVFYSAAAEGDGRAFLDAVTPFVTTDMVLQADLDMA
QKIIEERALKTRQFFNAIAEDWDELNREVLGGFDLAGAVAEAMPQCETAV
DLGCGTGSVIERMLQRSQQVIGVDGSPRMLELARRRFVEGAERVSLRIGE
LDHLPLRDGEADFASINMVLHHLSDPGVALGEIRRVLRLGGQLMVTDFDR
HDNERMRSDYGDRWLGFEGVQLEGLLREAGFTVRECRRQGVAKGLALHLM
LAEKTQQ
>DVUA0086 response regulator
MSILIIDDEPGLRRSLAAHFEDLDLDTLEACNGLEGLEVLREHADSIEAV
IVDLNMQVMDGASFIGHATQEAPEMPIIVLSGVGVIEDAIAAMRRGAWDF
ITKPLHSFEMLDHTLNRVFERARLLRENRMHRENLECLVRQRTEELEETR
RQVMQRLSRAAEYKDNETGRHVIRVGQISRLLGAAMGLGTQQCDLLGECA
PLHDVGKIGIPDEVLLKPGRLDDDELVIMRRHCLYGCEILGPLDDREAAH
RICSDVPLLRDQQPFDELALARILALCHHERWDGGGYPFGLSGEDIPVEA
RIVSVVDVYDALCSDRPYKTAMPPDEAAILIRDGAGTQFDPAVVDAFLCH
RTEIDAIRDRWRD
>DVU1744 DNA-binding protein
MNALEKFRVEKGLTYEQMANLSGVTKASVWKHCRGVAEPDVESVARYMQR
LGLTFSLIRPDLWPPSPPSSPTMPSVARVK
>DVU3360 ParB family protein
MAGNQRGLGRGLDALFKNTVEPSAASDITSLPVRSLAPNPAQPRKHFDES
ALQELADSIRAKGVLQPLLVRPVRGTEPQQYEIIAGERRWRASRLAGLRE
VPVLVRDLSDQETLAVALIENLQREDLNPVEEALAMHDLREQFSLSQEEL
ARQLGKSRPAVANTLRLLQLPQESLDDVRSGRLTPGHARALLGVTDQTAQ
ETLRSAIIEQSLTVRDAEAAATYWKEHGTLPDTLAHVPHRAQTPRNKAMR
TKTPEVKLLQKRIADTLSLKASVSGTEQKGRVTIAFDSPDDLARLLARLG
LSNH
>DVU1557 hypothetical protein
MSSMKVLEGSYSGLRCAPCGKSLQPCAVELEYMGSRFNVELPACPSCGAV
FIPEELAMGKMAQVEHLLEDK
>DVU1970 response regulator
MAPPPVEGAGPFLQLLRLRGTMNRQHILLVDKDPEVRALLSQMLAEAGYS
VSTAHDALSALDTARKSRPDCISLDMDLPTPGGTILYARLRRDETLRHTP
VVVHNGCARLPNSVPTIARACCPASLLETVTRILT
>DVU2149 conserved hypothetical protein
MDAHVVRRVFAALTPVLTGARLEKIHHPAPDLYTVTFYAAGHKQHLVLRA
GRKLPLLYLSPRRPAAPSTPDAVTMRLRKYLCGKRVVDVVCHWQERRLAM
RVASADQTWLVMDMREGVSLASAFAPAPDDGPWPDALTLVDACSDDAMPQ
TEGAVSEAWRTYPMLTPALRRTLLHMDRPDAAALLVDLEAGCGDLFLYER
GDGPVALSAWPLELGGLPVQPPAQSPVQPPVQPLVQPGGMPVVSPGGAWA
AVSGRVSGLSGDVREVVCEDPLDAALRYGEPLVFGDLAATRHNEAAKPFK
GESARLGRLLTKLDSEEHRLRALLAERDDAVALQAVLYRYPAEVRLDHVI
VPEGEGERRISLDPRKTVRENMADMFHRSDRGARGLSMLESRRASVREER
MAAEQARLAPDAPAEVAVGNVGRRGAQVRARTGGLPKTVQAFRSDDGFRL
LRGRSAEGNAALLKLSSPHDLWMHAEDGPSAHLVIRRDHAAHDVPEQTLV
QAGVLVGLKSWQREDAQARIMCAYVKDVKPVRGAPAGKVRVERTLTSLVV
KLDAALEARLAEGGIPPGHDDEAATAKAD
>DVUA0084 transcriptional regulator, AbrB family
MLKQTSTGTVQIPKGLLQRIGIKENEAILAMPRPDGTIVLHRFDPLRAIV
TNQEDDLPQGETD
>DVU1518 transcriptional regulator cI, truncation
MFHRCNILNMNIIDRIREEQGLSYSALARMSGLKTPTVWRHCRGKSFPDL
GSCAAYARSLGISFEQLRPDLFAGTPTSPSTPRKPRSHQHDASKQS
>DVU0509 conserved hypothetical protein
MTPSEERHQPVRMCVICRRRFAKHELLRYVCPAEGAAPVADERQVLPGRG
WYVCGDPACRERLRKFGGWRRKRKGV
>DVU2111 transcriptional regulator, LysR family
MNLRVLRCFVEVVRNGGFSAAARVVCATQSTVSKAVRSLEDEYGTPLLDR
SNGVALTAAGETVYRRALAILAEKEALDAELGAQQSLQHGTLRFGVPPVA
CDRLFARPLSAFHARYPGIRMELHEAGCYALEEMVLRGELEMVLALLPVS
ERFETAPLCDEPLIAVLPEGHPLSGRPCIRLEDLDGSPFIQFEQGFALNP
RIRDACLRRGVSLRETLCSSQMAFIISLVAAGLGVALIPRLMLAEGTPAG
VVTAHLDADDLRWQGALAWRKGHALSPPARAWLDIMAEMPPRLSPDMGQT
>DVU2567 conserved hypothetical protein
METILALRKFGFTQQESLLYVTLLRHGAMTGYEAAKAAGISRSNAYAALS
SLVEKGGAVVASGDASRYVPVPRHELLGNLRRDTEATLAFLDANLPEEQP
DETPYLTVAGLANTANKIRNMLTGATLRVYASLHHENLALFRREFEDCVA
RGLKVVILSDTDPAIAGAVFLKNRAGTGHVKLIADTSEVIAGLLEPGVSG
RCLYSRNEHLVYLMREAILHEMELIRIREGKEAE
>DVU2106 sigma-54 dependent transcriptional regulator
MALPRDIPCETIMESVADGVFTVDLDWRITSFNRAAAAITGVPAEEALGR
RCRDVFHSSVCDGACVLRACMEQDTPFGSRTVFMVRTDGTRVPVSISAAP
LKDRRGRLIGGVETFRDLTALHLMRRELEGQRTVEDIVTRSHAMTRLLDL
LPQIAASDAPVLILGESGTGKELFARALHNLSPRAAKPFVGVNCGALPEN
LLESELFGYKAGAFTDARRDKPGRFHTAGDGTIFLDEIGDMPLPLQVKLL
RVLQEKCFEPLGAVNAEPALARVIAATNRDLERMTAEGTFRTDLYYRLNV
VLLRLPPLRERPEDVPALIDHCVRRRNLLTGKDIEGVSEDVLHLMLRYPF
PGNVRELDNIIEYAFILCGHGFIQLEHLPEYLLHAGGIATPSLAPSRPQP
RPAGEPGDDGQPATLEAIKYRAVVDALARNNGRRMATCRELDISKDTLRR
ILQRGDTK
>DVU2909 transcriptional regulator, MarR family
MITDRLSQAIVALHERLLSWEHDVAREKGLTVPQTHTLGCLAMHGPLPMK
QLASYMGTTTGTVTVLIDRLEAKGFVERHPNERDKRSTLVSLTALGQDLY
EGHARRHREMTARLMAPLAPDQRAALLDYLETITRPV
>DVU2028 conserved domain protein
MGATPAPYIRERRWSTEQSLTAQEDGGVILELAARSEAELTSWVLSFGTH
AELISPQHLRQQIVQELGKAKELYR
>DVUA0025 response regulator receiver domain protein
MANVLLIGHQPDLYMHLSRLFADGGHSLKVVSSLEDGIRHCRASSCQLVV
LEEGMDNALEGIPRLRSTQAAPQVVVVAERYNPERGKAALLSGALNYMPK
GKAPRAITTLLERLPSFGGNGAEGPDLRDFGIFGSPPRCVPSSRPSPARP
MPT
>DVU1142 transcriptional regulator, putative
MNVMTTRRRQCGAARAKMRFRIREELERRGLTMTSLAAQIGVCNQAVSKT
ISGMTHSPRVLQALREIGVPEKYLCDPAKFEEVTEGKVA
>DVU1760 transcriptional regulator, TetR family
MQSRQDLLDATKRLVAAEGARATTVARITAEAGLAKGLFFYYFKSKDAAL
SAITSEIEGSYMQGLESAAGLAPPPERLAAIFVHHFRFIDECQQDALFLH
AVSVDCVAGGVEVVGGRGGPSLGFYEHLFMAILDTLESGVRSGDFICSDT
DEMAFMILGAIHGLARLKLSGFRRDYDVVSHLVAFYGKALGHHA
>DVU1964 transcriptional regulator, rrf2 protein, putative
MKLAAKTRYAARILLALAMHGEGAPMTTTSLSERTGVTVQFIEQILKTLK
RGGLTRSTRGAAGGHTLARKPDDISLGDIVRLMEGGIQLTVCCTGEPNAC
SRKSDCLTRSAWIKASQALEAALDETSLTALMSGEVTHDERACRSLARTG
LADVVGRNTKRERSDLSYEI
>DVU2953 transcriptional regulator, GntR family
MNIPLDRSLSLPLYAQVAAFIRAQIERGALEPGMRLPSIRRLSQDLGVNR
VTIETAYGELEADGLVTARGGSGTFVLPPFPACALPSLDGRAVPAAPPAA
TGRKRGTASSASDAATVELPRWQQALCDRRPDLSCDLMIPLQVPGPDEGP
IALASGNSDARLFPLASFRRTLRTVLARDGIKALEYEDPAGYAPLRRTIA
RILADQGVPATPDTVLVTAGSQQALHLVAQVVLKPGDPVYVETPSYADGM
ALFRTLGLRIVPVFTDSEGMSAEGLREAIARHGHGLVFTMPNFQNPTGIC
MSGQRRRRIAAIAVAHGVPILEDDYVGDIRYEGYSQPSLHSLTPPGHTFY
AGTFSKMLVPGLRMGYLVAEGPVLRMLARVKRMYDLSTSSVVQRTLERFV
DLGSYRAHLTRACRIYKVRRDALLDSAVRHLPDDVTIAPVRGGLFAWMTL
PEGVGATVLAHEAARHGVTVTPGTPFFAEGLEGERHLRINFTQHDPEILE
EGMRRLARAIARCRKGKHCA
>DVU2378 transcriptional regulator, AraC family
MLTCLILHSGPAPYGEGITLSSGIARTISILGVDRALCPDLADMPPVLTV
LASPSVLLSLQAWHTGAHDGMSPTRAAARLLDLLASVVETARCEDEDMPP
EHRAAHILATHLASPPPIDDLARICRTSRATLARRFRATYGTTMREYLRL
RRLEAAYRLLEREGVSVTDAAYAVGYESLPSFSRAFHEHYGKAPVIVRNR
VPTYVPPAPVGYVCRLHDSRPPSPVHDIHD
>DVU2675 DNA-binding response regulator, LuxR family
MEPGGRILVADAQPLVREGLKALFGVMDGVSVVAEVSSGGGVLTVCDRAR
PDLLLLDCCLPEKDGVLLARLIRARGGGERVLILCGHGGDCLDPAVAAGA
DGLLLKEADHEEVRFAVRSVLAGGFFVSPSVAGRLATRCRQGWALEDRRT
GGWEALTPREREVLHYVAEGFRNREIADLLVVSEKTVEKHRANFMAKLGL
HSAAEVRAFAQRQGLPLRLRDHLVEKG
>DVU2676 hypothetical protein
MRQSITSITQSMVLGARQSKKIAECIGKPYPTMMRELNPFDHSAKLGAET
LLEIMKVTRNVAALEYMARELGYKVTPCEGDGQLRHCD
>DVU2968 sensor histidine kinase/response regulator
MTQTGQEKDDLLFFAEEEQPGQDVPRAAATPWYVLVADDDAEVQTITRLV
LSDFSFEGRKLHLLEATSGAESLDMLRRHPDTAVLLLDVVMESNDAGLQV
ARKVREELGNNLVRIVLRTGQPGHAPEHRVIAELDINDYRHKTELTAERL
HTTVTAALRSFRDLRAVEEGRERLAHLAMSVAHQVRNRTMTIGGFASLAV
RRAPAEDPVRGYLDTIIEESRRLEHMVGAVSDFASLPHAIRTVVPVGESV
LAALEQARQRAAQQGRTLHWQVEVPDGHMVHGAASLLQRLVFEILANASD
FAREDGGEVSCRLLCVGGLCRVEVADNGPGIAPEDMAFIFDPFFSRKADG
VGMGLCIARRIAGECGWDIEVDAGFGRGARVSVLLPSWAGNNGHGRFA
>DVU2690 hypothetical protein
MAWYGNAILTLLADCSRTKQELADALGIKPPAVCDACKRLRANGYVQWHN
GYWNITDKGWQMLASGQPLKSGPGKGNSPARGRSTLRAKAWRAMRMLEGF
SLDDLLTMLCDGSEGDPSRNLTDYLRALVAAGYLMPLPRRGNGRHPQRYR
LRRDRYTGPDAPAWNKPERTLTDPNTGEVFRIPRKRDSVEEAPHA
>DVU2464 hypothetical protein
MTDENATTPETAAAPQAASSNAGPAGHGTPLPNGALLSFEQRLDAYIAAL
RDLKERRAVKEVTEREMLQLLMRLNAPRINELPLLESLQQGITDFLTIRG
VTDPLHGFVAETVRKGITLMNRYLTLGPDSPDADALRAEVANCETLLLKG
IQGIVYTTGLCMDNFTETLVRAYGDVAIAASDTIIRETPPGEDFWRRHFE
HYVVALVRKAYDSIIEDEGFSIAKEKSVLVIRYPFDALLAQLRLTPPPEE
KSRIQKLFEGEARDFATRKARKIVQNLLRSLADKSLYPFADDAIDFISQI
VCIDPAAAELDRLQTQLISGGTHEDGRQVSAAEVQFARDQVLCMACCVGL
TLNIMRADFIAGLGALGQRDIALLRRTLGDFSLPCMGRTLQTLLEVQFVS
ELRTRAGDDLGKMHMRTLRERRTSTSAVEALFDQGLTRIRRNKLWEQDPH
REDMLLFKPQSASELDALLNILQVEPLLEREVRRLWVEAPFKVEFGVFLS
LDLLARSTTNLNQRLAEVLGRFGITRI
>DVU3310 ATP-dependent RNA helicase, DEAD/DEAH family
MESVESFKDLPLEEELLKAIEELGFTEPSPIQSIAIPRLLEGRDVIGQAQ
TGTGKTAAFGLPLLQRIDAADRSVQALVLCPTRELALQVANGLTALAKHL
RGVRILSVYGGQPIEPQASALRRGAQVVVGTPGRILDHINRGTLQLGVVR
MTVLDEADEMLDMGFREDIERILSEMPEWVQSAFFSATMPDGILELARRF
LREPELLRVTRRQLTVANTEQAWFEVRPFRRVDAVCRIFDAYIPRKAIVF
RATKQGVDELAAALQQRGILADALHGDLNQTQRERVMSRFRAGGISVLVA
TDVAARGLDVDDVDTVINFDLPNDPETYVHRIGRTGRAGRTGRAFSFAAG
RDVYKLRDIQRVTGSRIDRRAMPTAADASRARTGQLLEEVAAGLASAETS
ACLPVVEKLIAEGADPTQLAATLLRMIMQRDRIDLPGARQTDDIGTGRVR
LFFNVGRRMRITPRDLVGAIAGETGISGRSIGSIEIHDRFSFVEVDASIA
PEVVSVMHGNQIRGFRLAVEQASPREGQDRAA
>DVU0525 transcriptional regulator, MarR family
MNSRLTSFSYRIAQLHRIITLRLGEALAPLGIGRSQYPFLAELFLGGDGR
SQETLAGALHLDKGATARALASLEADGLVRRVVNPDDRRERFVVLTARGE
ALRKPLIDRLRRATEVIAADFSDEERHLTLGFLDRMLVNVGAETPQQRDA
RADSLVGEYGVPSLISQGSGTAHPTCFGKGQNDTDAECISSPSVGAAQGS
VVKVAVTDTTARESRTKGAAHE
>DVU2577 DNA-binding response regulator, LuxR family
MPITVVIVEDLDIVREGIKALLDANGEFIIVGEASDGIEALRIVEKHAPD
IVLMDLTLPVMEGAEAIREIKRRRETTKVLALTAHKKDSLIYKTLSAGAD
GYLLKNASRDILFQAMQTVLAGRRYISPEISDLLIDDFLRHGRRDEASML
DLLSDREKQVLKLVAEGHGNKAVAEKLCISHKTVEKHKANLKRKLGTAST
AELVTFAIEHGLTVPA
>DVU0063 transcriptional regulator, MarR family
MVEENPREGFGMTVGEVARQWRILLDARLKPLGLSFSRWAVLVTLHFEGP
MSQVELARYIGVEAPSLVRQLDKLEKEGLVRRVQHPADRRIKVVEIDPRA
FSICEKVRAMALQLRDEVFEGIDEPTIRAAHQALLTIRDRMARMQA
>DVU3123 HD domain protein
MSCRRVLEPFLHELSESLGRAIDAKDPCTSTHSEEVATVSHALALALRLT
PGDADIIHIAGHLHDIGKIGIPDAILFKPDRLSDEEWGVVRRHPGMGAEM
LRPVAALQLHGIPVMVGQHHERFDGKGYPQGFSGRAIHPGARIIAVADGL
SAMMQRRSYRAAWTFDEALEEVVRCRGTQYDPEVVDALRATQAPVRGIME
AFAEDAHYAETGCATEGHMADVAGLAHVTPA
>DVU0749 DNA-binding response regulator
MTRLSTLLVHPDPMLRHRLRAMLEPVDFLRVLGEAAGAEEALALLNALPY
GAVFLGISLAEGPDGMEVARRLMGNRDHPALIFIADDESRAFEAFELDAT
DYLIFPCAADRFDRTLMRLRQFRTHFRLAPAPGSRWREQPQAAPEELPPP
AMDDLPPPGTEEGPPFETLQLPLAEDEQDTLISALGEAVDYSQRVRPVEL
DKLAVSVDGKTLLIPYGEIAFVEAYEDYSYVHTADDKYLTSYRLKNLEGR
LRPHRFFRVHRKYLVNLDMVTELAAVSGGNCLLRTAGRTRIELPISRRRL
GELKQILGL
>DVU0529 transcriptional regulator, rrf2 protein, putative
MKLTTRSRYGTRMLLDIAMHGSEQPVSIKDIAQRQGISVKYLEKLIRVLR
KAGYITSTLGAHGGYQLAHKAEDIPVGDVVYALEEMEAPVECDEENPCCP
RMAVCLTRTIWGEAAKAMYRKLNTFTLADLMRDASLCPKNACNISPHATH
>DVU3088 ATP-dependent RNA helicase, DEAD/DEAH box family
MTQEPNMPEDAVAPEEDRAARVAAEITGIDEPEDALPSVQFADLAPRLQE
ACIRAGWQSLMPVQAHALPYLFDGRDLMVQSRTGSGKTGAFLLPLLERLD
PAEASTQALVLVPTRELALQVEHEARTLFEGTGLRVAAVYGGVGYGKQND
ALREGAHFVVGTPGRVLDHLLRRTMQLDRLRALTFDEADRMLSIGFYPDM
KEIQRYLPKRRIATCLFSATYPPHVLNLAGEFLREPQMLSLSHSQVHVAQ
TQHMFCESKPMDKDRALIRLLEIENPSSAIIFCNTKANVHYITAVLQGFG
YNADELSADLSQSKREQVLERLRNNEVRFLVATDVAARGIDIPALSHVIL
YEPPEDRESYIHRAGRTGRAGAVGTVISLVDIMQKLELQRIARHYRMDIA
HRPTPQDEDVARVVGDRLTALLEGAYRQCTGLQRERIQRFTDVARTLAAD
EEQVVLLAMLLDEKYQQSLHAMPPRPRPQRASASRAVDSESDTAPRRRSR
GRRDDEGSTGGDERKTAPRTAPSRTTAGAEGASAHEDTGAGNMQTAQDGD
EQRTPRKRRRPRRRKPTGGDNGTSHDA
>DVU1967 transcriptional regulator, rrf2 protein, putative
MRISSTVHYASRLLVNLAQHTPAAGPVSASELADRTGISVKFIEKIIRQL
RTAGMVRSVRGATGGHLLSMRPEDVTLGDVLRVVEGGVQPPNCCVGDDCE
DTPCRCKTAWISAAKALEATLDQYTLADIMSTQPTANERSTKRPAARMSN
PQYDRTTPGTPYAHGRSCAHQSQ
>DVU0629 transcriptional regulator, TetR family
MPSSKDNILENARRLFADHGFKGTTIAQIAKTSNVTDAAIYRHYRSKQDV
FDTIIAKFIERHSILLGRIHERQKSGYCLLETLVLDHCAFVQENMTDMRV
IFSTYTTIPSARAAIDRMHDNVVATVMACLERGISDGSVRDDIDKHETAT
IIAILLMGLNRRRIYSPDSPELARGVVAFCQRSLRS
>DVU2036 helix-turn-helix protein, CopG family
MSAVTTRLDPETQLQLEALAKATDRTRSWLIADAVRRYVEEESWQVAAIA
EGLRQADAGDFASDEEVASSFAKWGVNVE
>DVU0330 response regulator
MLPVILFVDDDHNVLNGLRRMLAPQQNRWNMLFAHDAADALRIVDQTEVD
VVVADIRMPGMDGATLLRHIRTARPTTLRLVLSGYTEETSHLHTSSLAHQ
SISKPCDAARLVPALEDALRLRPLIADDDLYGRLSRLDALPSLPETLREV
LAELNAPNPSLRRLGTLIQRDMALSANLLRLVNSAFYGFARRISMPEQAV
VLLGVRALRSLVLAAHLFDSLGGAPVAVRQLTGLWEHGVRTSGLAQGIAT
QAGLSHEERDNALSAGLLHDVGKLALAAIAPDRVNAVFERMAAGEGSFID
IERRHHKATHADVGSYLLGTWGLPIPVVTAIARHHNPADSETVLGTVTVV
HVANAIDHLLQTPDAIDALLAAGGNLTLPGCDMRHLETLGVLDALPAWLQ
VARDRLQAVQPA
>DVU2423 transcriptional regulator, putative
MKKTTARDADHRPCLLKHCAGKDYYCSLELTLQVIGGKWKPIILWRIGQD
GVLRFSELRRILPNITQKMLTQQLRELEADGMVHREVYPQVPPRVEYSLT
ELGRTLMPVLEHLILWGRAFEEMHGVTPAPYKEDGTDTEKATAAAPAIDG
DEADDEAAA
>DVU2788 transcriptional regulator, ArsR family
MRDDTPVCEQHCEHGDIIARVRSRLSPDADVTALSTVFKLMGDPTRLRIL
EALSMDELCVCDLAALLCLTQSAVSHQLRLLRASKLVRFRREGKNAFYSL
DDDHVRTLFRQGLEHVRERT
>DVU2532 transcriptional regulator, MerR family
MEEKTYRIGEAAELLNLKTYVLRFWETEFPQLDPLRTEKGQRLYSERDIA
VLRRIRHLLHERGLTIEGARRILAEEGGHAAAEPLPVVAPDSADTTPAVA
ASCDCGGVVRDIVAELEQLRRLLAGTS
>DVUA0137 response regulator
MLPVDPSPARADLRFLLIDDHPAVRQGLNLLLESHGYTPGVEAATRADAK
GCLEQATFDLALLDLSLADGSGLDLLADLAEHGVRILVYSMHEDPGTIDR
ALRCGANGYVTKREDPSVLLEGIEGVLRGERFVSERAGSSLDETAGARAM
DPLFLLSDQERAIFSAVGRGESNMDVAGSLGISPRTVETYLARMVNKLGL
SNVRTLRKFAINWRE
>DVU2194 hypothetical protein
MSDKRRPDATMRLHRPTGEVVRIEIFRSEQWPTRPEAQPNAFRIRLDGRW
WPEAKTMDEIHFASPYGIGQLVTRLVSASFGIPSGSPGSEEPPVHKGDVV
RVYADGRITRSRALGDAARDPATMEWMVRVIGFQQPQRVDALLPPPNEPQ
SVPACMTVCTSCGNVTAGSDDLFQPCLNCDGNERLLVRAAELGELALLSR
KVDSMAREEGLCGHIARQIIEPPQEDTDA
>DVU1572 transcriptional regulator, CarD family
MFSPDELVVYPAQGVGKVERIERQEVGGVTAEFYIVRILTNNVTLMVPVK
NAANVGLRPLCSTERANEIMLSLEDRSGFTGYTGQNWNRRYREYSEKLKS
PDLGDVAYVLRELLLIGKDKELSFGERRLLEQAMSLLVVELSHVQGLTQE
EVRANIEALFQDVLQPRENVE
>DVU1138 hypothetical protein
MRSDAMDALRAALRAFCPTGKETVTVPQLAEALGLTTESQKQLLRRRLLI
LATRGETEKVGRGVWLFIPGKEPSRRGESYVRMWRAIRIQSVGWKRQDIA
LIARVDATAVGRYTRWLESEGYIAKSGQEGNANLWRTTAKGRDHRQTPWP
PVDIPDPYEDERKATAQLCRILLLEDPDKPRTRNRIQEQLAVLTARFCTT
GADTPQITEA
>DVU2359 sigma-54 dependent transcriptional regulator
MLQPGKFTRIAPHVLREFDISPFFDLLLSMAQERTVEGLLQLSTRVYRGT
HVACGGVWFTEKASGDDGAGWVMRLMTLAGRTHRHPRTWTHTAGDYSLIP
PQEPLLGAVALSGEPLVVASPDEWTRPEWAVDEGFAAYSAFPMMCKGELV
GLLALFYERPMTDRLGDLLSLHYKMHKIYADSLAAAITNARAFEEILHLR
RELERENERLRRQVEHGSADGNLPIVGDCPAWLRVLAQVDMVAPTDATVL
VQGESGTGKELVAEAIHRRSQRSTAPLVRVNCSAIPRELFESEFFGHVKG
AFTGAVRDRIGRFQMADGGTLFLDEVGEIPLELQGKLLRVLQEGTFERVG
EDRTRSVDVRIIAATNRDLRQEVDAGRFRQDLFFRLSVFPVELPPLRDRQ
GDIPLLARHFIAQSSRRLGLPTPRLTPAALARLSAYPWPGNVREMQNVIE
RAVIMAEEGALGMDALPAPEGLRHDDRVSVAAPAPGATTIVTEEEWRTMQ
RDNIRRALQAAEGRVHGVGGAAELLGIPPTTLRSRMQALGLSPKQGHGPK
G
>DVU0024 conserved hypothetical protein
MEDKVLQAMKDAGKPVRPGDVAKALGVDGKEVSKAIDALKKSGRVVSPKR
CFYEPA
>DVU3215 response regulator
MNILIVDDETEFLELVGKRLARRGMDVTTASSGEEALTLAEGRVFDVVVL
DVKMPGIDGLETLRRLRVMHPTMPVLLLTGHASLGSAVSGMELGAFDYML
KPVAINELIIKLNEAARLGGA
>DVU2802 transcriptional regulator, GntR family
MKQKAAHTASEQIMKLVHSLGLTSGERLPGERDLAERLGWSRNTVREAIS
ALAARGLVEIRMRSGVYLCDSGPDAICTGQRSCGDAVDALTVLGPALVER
VCTRCTDDDHERAERVTARLGRALVDRNPHDAWLGLMAFYGGLAQSTGNA
LLEHSAEEVATAGLRACDVLAGNELPHDALQTFFAAHVEMLQAMRRRERI
QARQLAEDSLTAFGRMLQVAGYAPQEATHDA
>DVU2827 sigma-54 dependent transcriptional regulator
MKKIIEHIESIFDILSDGIYITQRDGTTLLVNRMYEQLTGLSFKDLRGRN
VHDLVADGIFDTILNPEVVRTKRPAVSVQHVRQSKKIILRGYPVFDEHGE
VCLVVTFARDITMITQFREQIAQQKQLIETFNDRIECMLHEQVRNSQPVF
ESEVMQQVLDLLQRVAATDANILILGETGVGKDVFARLAHEYSPRSSKMF
LKVDCGSIAENLIESELFGYVPGAFSGASSKGKAGYFEIADGGTVFLDEI
GELPLPMQAKLLRVLQDREVMRVGSSQARKVDVRIIAATNRDLAEDAKAG
KFRSDLYYRLNVAVLDLPPLRERQQDIIPLVERFLDRFNAKYRRNMTLPK
GTRQALQNYKWPGNVREMQNLIQSLVVTCEGHSIKPEHLPPHIQKAARNR
TAYTPPAPDDARPLKEIMADIEREILEEAVRTHGSVCKVARMYKISRTTL
FRKLRGSSLAGVSGDEEQENTGQ
>DVU0321 transcriptional activator, putative, Baf family
MARHLLLFDIGNTNVKVGIATEGTVLTSYALPTDGTQTGDGFGLALLDIM
RHAGLGADDIDACVGSSVVPSLDPLLRHACERFLWRPLQLAHVDLPVPLE
NRYERPTEVGADRLVAAFAARRLYPDARALVSVDFGTATTFDCVDGDAYL
GGLICPGVLSSAGALSSRTAKLPRVSLEVSEDMPVVGRSTTTSLNHGFIF
GFAALAEGVTARLRKVLPEPLEVVATGGFARAVARVSDCFDHVRPDLLLE
GLRLLYLESEQR
>DVU1858 cold shock domain protein
MFDQGKIAQWNDERGFGFISPDDGSPRVFAHISAFRSRHPLPEVGERVLY
YLGPPSPKGSRASVVRYIDRVQRPAAWRGRHSALDVFAQKVAALVVVMVL
VVLAVLWSQFEGESSHQREVNLPAPAKADPQFKCAGKTRCDQMTSCAEAK
YYLRHCPGVAIDGDDDGIPCEMTLCRGW
>DVU0523 flgM, negative regulator of flagellin synthesis FlgM
MEIKTYLKQLDPYRTQLEKAETGKANARKGSAQPERAAPQGDRISLSVEG
KLRTEAYAAAQAAPDVRQEKVDTLRERVNNGSYTVDSRKVAEKLVKEEIE
LFRR
>DVU3229 fliA, RNA polymerase sigma factor for flagellar operon FliA
MVTSSSSGKSCSSAASPWEALEAGTTAWPDFAPAEKEAIVRHYAPKIRFL
ALRLKAKLPRNVELGELISAGTLGLMEALGKFKPQLGIRFETYAESRIRG
AMLDELRRLDWFPRSLRQRVRQLDEAMQRIEHETGRRATEEDLQKATGLD
EKDVRLGLEALQNQLCLSLEAMQDSLAGEGGPQSDADPMQTAATQELIER
VASLIDELTPREKLVLSLYYSDELNMRETAEVMGITEGRVSQLHSQALGR
LRREFRNHYGEHDAV
>DVU3245 greA, transcription elongation factor GreA
MSSIPISVEGFKQLEKELDRLKKERPGVIQAIKEAREEGDLSENAGYDAA
RERQGMLEARIKYIESRMAQFNVIDLDTISGDKVMFGATVKIEDLESGEE
KEYTLLGPDEADYAKGSISVQSPVARAMLGKEEGDEIVVDAPRGKIHYEI
VSIRFLGTKGQQR
>DVU0813 hrcA, heat-inducible transcription repressor HrcA
MSALGSRETHVLTTIIESYITSAAPVGSRTVSRRSGLALSPASMRNTMSD
LTDMGFLEQPHTSAGRIPTPKAFRLYVDALLRQSARRDEAPLHMVEALHG
HEPEVGALLRRASNLVSEHARQVSMVLAPGPAEARLRSLDFVPAGEGLVL
AVLVLEGGMVRTRLVRDDTHFGSDELVRFGNYINAHYRGHTLSGIRNSIH
HELSGGGAQLEAMCAQALALGSLALDSIDDDRELYVNGTRNILDQAEFAE
LGRMRELMDALEERSRLLELLDRTILEDDVHVTFYPDDVSGGAQRRAPDG
LRGCSMVSAPYGGASPLGVIGVIGPVRMDYRKVLPLVGAVSRVLTQLLRE
RFATG
>DVU2329 hypB, hydrogenase accessory protein HypB
MDIPVIRNVLEANDKMADQLRKLFARHGVLVLNLISSPGAGKTSVLERTL
TDLRDEFRMAVVEGDLQTDNDARRVAATGARAVQINTDGGCHLDSNMVLD
AISNFDLADLDILFIENVGNLVCPVEFDCGEDHKVALLSVTEGDDKPEKY
PLLFNLSSVMLLNKVDLLPYVDFDVERARRFSTRLNQNLTIYELSCRSGE
GLAPWYDWLREALKAKRAAAEAKA
>DVU0594 iciA, chromosome initiation inhibitor
MYDYRQVEAVAAVVLEGSFEKAAARLHITQSAVSQRVKALEDSLGRMLVV
RASPVRATDEGQRIVEHYLKVGQLEADLGASLVTDRPAAWTTLPVAINAD
SLATWFLDAVGPLLRRERVLLDIVTEDQEHTYRLLREGRVAACITTRADP
VQGWRSLALGDMPSLCLATPEFAARWFSEGLTPAAVREAPAVLYNRKDSL
HHRFLSDLFEEEVDFPAHYVPSSERFVDVLAGGFAYGIVPALQAERHLAD
GVLCDLAPGRAVSVHLYWHCWSLTTRFVEELTENVVSHARAVLGWRVPAR
>DVU0596 lytR, DNA-binding response regulator LytR
MTIRALVVDDERPARDELVYLLSAHADVETMEAASAGEALSLIASHHPDL
VFQDIEMPGRGGFDVLQAASLMTNPPVFVFVTAFDQHAIRAFDENAADYL
LKPVAPERLARCLERVRQRLAPDGGSTQVEDMMDRLLARIGRERPLPRIA
VEQGGRIHLVPTPEVVLIEAEEKRIAVVTEAGRFTCHGAQSLARIEDRLA
GQPFFRANRAVLVNLERVAEFSPWYNGKYHLVMNDSERTGVTVSRNRVRD
FKQALGV
>DVU1903 mfd, transcription-repair coupling factor
MLDFAALVRKLASKGCGHIEVTRSGMATAARLGNAVLDAGRSAVMVVRDA
EELALARGLLTLFSPDASAGDSPLVKPRWESRWVVMPQHPLGARNRDAWA
SRMAALFALGQKRVPQGVLITVDNFLSKLPPADLFASHELTLACGDEMAP
ELVLEQAVDWGFDRVQMVSRPGEIAVRGDIVDIYPPGYERPLRLEFFGET
LEEIRLFDASNQRSLGKLDEMVLLPVSPVVLSAELRSKATARWKRLFSKG
MLTEEQYAGLLRGIERHGEGLMPGAYYEAPTVVEEWLPRDAAWILPGRKE
LVDAVEAAQQNWEALFDKQAEEGGARQPRGLVLRDAAPVRQLYEEKDSAG
FEPLVMGVERTGVDMPERKLHGFVDLFPAPDARDRPWQALVAGLHRFVAT
HARVLLCFGNERGRRKFLKLAEQDGITPTLRYDPKGRGLMAVVAPYRAGV
ELAWDGTLVIGEDVLQPKTDRSARVASGAFRGLDKHEGLQPGDLLVHRDY
GVARFVGLERMDLGGVGNDFLLLEYAGDDRLYLPVDRLSLVQRFKGADDT
KPSLDRLGGGAWQSSKDKARKAIEKIAADLVEMYAYRKIAKGYTYGPIGE
LYREFEASFGFEETPDQARAIQDVLEDMDKPVPMDRLVCGDVGFGKTEVA
LRAAFRAASEGRQVALLCPTTVLAEQHYQTFRSRLAGFPVNVGMLSRFVS
KQKQTEVLAAAAKGHVDILIGTHRLLSDDVRLPNLGLLVLDEEQRFGVRH
KEKLKQFRRNVDALTLTATPIPRTLQLSMSGIRELSVIETAPPERKPVAT
ALIERDDAALKSILEREIAREGQVFWVHNRVQGLERTTEYVRKLVPDARV
GMAHGQMTERALEETMHRFWHGELDVLVCTAIVESGLDFPRANTLIVDQA
QMFGLGQLYQLRGRVGRSDRQAYAIFVVPDADNLSDIARERMRVILDMDY
LGAGFQVAMEDLRIRGAGNILGEAQSGHMTRVGLELFLEMLEEAVTRLKG
DPPRESVETELNIGIPAHIPEGYIEDARDRLRFYKALSSATDAAAQQDIE
MEMRDRYGVFPPELETFLALLVLKRQLRRMQVQRADIYPDKVRLVWDERQ
TAVDIGRLIEWVGQHADRARLQPPATLEWRLDTGLAAGARLDAMRGELFR
LVPDSTPSSA
>DVU1949 nifA-1, nif-specific regulatory protein
MTQSIQTDDRRLQPYLGTLQKIVSEMGPQRPFQSTLKSLLHTLAENHDFK
RPHIVIFDPETRTLKLSLTDTPAKAQNAEYEPGVGVTGQVFASGQPVVVP
CMKEHPAFLNKMFGRSEEELATLAFICVPVLGPSDEPREGREVIGTLSVD
TPNTSHAQLEAHCRFLEVVAGMIANHAAYMQEEMARQKHLMTQGLIVGDT
GEGTFNPANIVVASKTMRLVLNQAAQVGPSRATALLRGESGTGKELLAEA
IHQASPRRDMPLIKLNCAALPSELVESELFGYQKGAFTGAIQTKKGLFEL
AHKGTLFLDEVGELSPSAQAKVLRAIQEQEIQRLGSEQTILVDVRLICAT
HQPLEELVEKGLFREDLYYRINVFPIFIPPLRERREDILPIAEHFLRMYA
EEYSKSIKRISTPAIDLLTQYHWPGNIRELKNCIERAVLVCDEQVIRTYH
MPPSLQTAESTATDTNLSFCEAVAKFEQELLVDALKKARGNMLQAARDLR
VSYRIVNYKVKKYGLDAKKFAVAKARGMK
>DVUA0143 nifA-2, Nif-specific regulatory protein
MTCTVHALKLKALRAISNVIDRALQLEDALTETLRVLAETLAMQRGTITL
LDGETGQLVIAASHGLSREEQERGVYRLDEGVTGTIFSTGRPYLVRDVRN
DPLFLDRTGARRVERGKVSFLGVPILSKGRPVGVLNVDRLFGDAVSCAED
IEFLEVVATLVAQFLSLNEQVAARERALRRENMQLRTRVLDSRGDFIVGR
SGAMAEVQRYIQRVAGTRATVLLLGESGVGKTLIARLVHTLSEREHHPFI
KVNCASIPESLLEAELFGHEKGAFTGAVSARMGRFEEAHEGTVFLDEIGE
LPPGIQAKLLRVLQEREFERLGSNRTRRVNVRIVAATNRDLAAQVDAGRF
RQDLYYRLCVFPIRVPPLRERPEDITGLLNHFLAKVARDYGRSLVLAPDA
LELLQRYAWPGNVREMENLIERMAILTDGTLADRRFVESLLEQAPAGDDG
QMRAGLAVPPSLREVEQGELLAALRRNGWIQHKAARELGLTPRQMGYRIR
QWGLAPLVASERAKG
>DVU2891 nikR, nickel responsive regulator
MGRTIRFGVSLDSELLDKFDVLCDERCYQTRSEAIRDLIRNTLVQQEWED
TDREIAGTLTLVYDHHKSDLAQRLTEIQHDVHDIIITSLHVHLDHYNCLE
VLVLKGPGQQVRNLAQRLISTKGVKHGKLSLTTTGQDLT
>DVU0510 nusA, N utilization substance protein A
MSMELKKAIDQISKDKGLERDMLVATLEEAVRTSVVRKYGDDIDVEVSYN
DESGEIEVYQFKIVVAELDDEDEDGNAHIVLEEARKHDPSVQIDDEMGFR
LKVEDLGRIAAQSAKQVIIQRMRDAEQELIYDEFKDRRGEIISGIIQRRD
KAGWIINLGRTEALLPKEEQIPREHYKRGDRVQAIIIEVRKEGRGPQVIV
SRSHRDYMAALFRREVPEVDDGTVQIMGVARDPGSRAKVAVLSRERDVDP
VGACVGIRGSRIQNVVQELRGERIDIVVWSPEIATYARNALSPAVISRIV
VDEEENLLEVIVPDDQLTNAIGRKGQNVKLAAKLLGWKIDIYTETRYNEA
NAIGRGLEQIASVAEISIEQFVTAGFQSIERLREASDEELASGLGIDDNR
IADLRAAINFLSPAPSASDGDDADGETE
>DVU1197 nusB, N utilization substance protein B
MTTKGTPSRRAARALAFQILYGLGFSPAASVKQLREAYASSPDVADKGRS
PQPEGFAWELIEGIWTEQANIDEVIGLFSQNWRIDRIGRVELTLLRIAVY
EMLYRIDVPPKVAINEALELSKQFGDANARGFINGILDAAAKALEGGQLK
PRV
>DVU2923 nusG, transcription antitermination protein NusG
MTETTTASKARWYIVHTYSGFENRVEQTIREMIRTGQSQDEIVEVVVPTE
KVIELVKGEKRTSTRKFYPGYVMVKMFMTDFSWHLVQSIPKVTGFVGGKN
RPTPMRDSEAERILAMMESRQEQPRPKFNFDRGDEVRVIDGPFGGFNGVV
EDVNYDKGKLRVSVSIFGRQTPVELDFVQVSKG
>DVU1083 phoB, phosphate regulon transcriptional regulator PhoB
MAKERILVVEDDEDILQLLRFTLEAAGFEVVTAATGRDGLESAQRHVPGL
VLLDLMLPGMSGFDVCRELKRTPATEHVPVIMLTARGEEVDRIVGLELGA
DDYVIKPFSPRELVLRIRAVLKRVTGAQEPAPRGQWNVDGLFLDEEAHRV
EVDGEEALLTATEFRLLAELVRNRGRVRTRDQLLNTVWGYEFEGYARTVD
THVRRLRQKIGRFAAMIETIRGVGYRFKE
>DVU2988 pspA, phage shock protein A
MGIFSRFKDIVSSNINAMLDRAEDPEKLIRLMIREMEETLVELKAACART
MAECRRLGREGEEAERQVSLWDRRAELALDSGREDLAREALLERRRATEH
VEALTRETEECEALVARTQEDMDVLEQKLVTAREKQRLLAQRHVHARARR
QAREESRRAASFDVMERFETMERRVEHMEAEADAVRVPRSGGAGGVFADL
ETRDAIERDLAALRQRMGRDG
>DVU2986 pspC, phage shock protein C
MSRYHGRRGQCRDGFGSYGASRLYRARDGKFMGVCQGLADHFCLSVFWVR
VLVVFAALFSGFWPVLGIYVLMGLILKPRPVLPFETDSDRRFYDDCVRSR
TSALARLKERCERLDNRLRRMEDVVTRRDFDWERRFRTGT
>DVU2989 pspF, psp operon transcriptional activator
MRSDALIPTHPGLAEALGQSEAFLAFQEELSRVAKVDRPVLLVGERGTGK
ELAAARLHFLSRRWQGPFVILDGASLSPSLAEAELFGHEAGAFTGAAMRR
PGRFERADGGTLFLDEAGNLPLSVQDKLLRVVEYGQYERVGGTQRLEADV
RIVAATNADLPGLVRQGRFRADLLDRLAFCVLHLPPLRARGDDVLLLAEH
FATRFAMEAGLPEPEFSTQARRALLTYAWPGNIRELRNTIERCVLKAEGG
IITALDTTPFASPWQHGPAVHADATAVSTPAGGGATPGPASAPDIDPADT
AMQHGDSGTATTTPTASSPNPQAWTQGTTLPDAVRHLEEDALRGALARTR
HNRRAAAELLGLTYDQFRGLYRRHRDAIEKT
>DVU2083 relA, GTP pyrophosphokinase
MIRIQEIVDKVAASHKDADISLIQRAYVYAAAGHAGQTRLSGEPYLSHPL
AVADLLAEMHFDEATVAAGLLHDTVEDTDAGIEDIDREFGEEVADIVDGV
TKISQMTFDSKEEAQAENIRKMILAMSHDIRVLMVKLADRLHNMRTLDFQ
KSHKQQSIAQETLDIYAPLANRLGLHRIKLELEDLGLRYTKPDVFAQITD
WLDENQMVERNLIDKVIARIREVLDANGIEGEVRGRIKHKSSIYKKMTQQ
GLALDEMHDIIAFRVIVADLRDCYAVLGLMHAQWKPVHGRFKDYISMPKA
NGYQSLHTTVIGPEGERIEIQIRTREMHRMAEHGVASHWLYKDAGRVNPR
DVAQFTWLREILDRQKHEADSKEFMHSLRLDLFKDEVYVFTPRGDVKELP
EGATPIDFAYLIHSQVGDHCAGAKVNGKLVPLGTPLVSGDTIEVITDPNR
HPSRDWLKIVKTAKARSRIQHFIRTEERARSISLGREMLEKEGRRMGINV
SKAIREGDFDAVVKEFSLGSVDDLLSSVGYARHTPKRILRRLQAHISPPA
PEEVKAQEPAPTAPPDRKSESVSIRGVDDVLVRFARCCNPVPGDAIVGYI
SRGRGVTVHTSDCPNVQGMEPERLISVFWDGHEDKPFPARIHLLCRNEKG
VLAQISALLAEANINIDSGTMHSLVDGHSEVELMVEVRDVAHLYHTMDRL
RKLPAVLEVIRAAAHME
>DVU1982 rhlE, ATP-dependent RNA helicase RhlE
MTFADLSLSPRLLAALDGMGYRQPTPVQRGAIPPALAGEDVLALAATGTG
KTAAFVLPMLQRLMDGPRGAVRALVVAPTRELAEQTHDHVRRLGSMSRLR
STTIYGGVGVVAQALRLRAGVEVVVGCPGRLLDHIRRGNLDLSSLEVLVL
DEGDSLFDLGFLADVRMLLGMVPATCQRMLFSATMPDAVRVLAAEALRQP
VTVQVDAVQPASTVHHALYPVPAHLRTPLLKTFLRSGPEGSVVVFVRTRH
GARRLWQQLDNVGFSVTCLQGKLSQRRRLAALEGFRDGRYDVLVATDVAA
RGLDISQVTHVVNYDVPSTADAYIHRVGRTGRAARNGTAMTFVTPADEAQ
VRNIERVLGTVIPRERLADFDYGAPVRGPEGARPAMPPRQPRLPAGKRPA
APQEAQEQPRRGRPRPPRHAVPPAAHPPTIPSRLPRQTPAGAEQVDLVRS
SRMRGQGGDSDE
>DVU1571 rho, transcription termination factor Rho
MNLSELKIKSMQELMELAEQFKVENASGMRKQELIFALLQACASQNGAIY
GDGVLEILPDGFGFLRSPLCSYMPGPDDIYVSPSQIRRFALRKGDVVSGQ
IRPPKEGERYFALLKVTEIGFEPPENAKNLVLFDNLTPIYPDRQFIMENG
DKNYSSRIIDIMAPIGCGQRGLIVAPPRTGKTMLLQTIANSINANSPDTY
LIVLLIDERPEEVTDMERTVKNAEVVSSTFDEPPQRHVQVCEMVLEKAKR
LVERKRDVVILLDSITRLGRAYNAVTPSSGRVLSGGLDANALQRPKRFFG
AARNIEEGGSLTIIATALIDTGSRMDEVIFEEFKGTGNMEIYLDRHLSEK
RVFPAIDINRTGTRKEDLLLSDEVLNRVWILRKILAPMSSIDSMEFLLDK
MRGTKSNRDFMNCMNK
>DVU1440 rnc, ribonuclease III
MWARTAAWVFGLPETLREICYRRDNVKPVDELQKTIGHRFGDMELLLTAM
THSSWANEQAVPVEHNERLEFLGDAVLELCVSEELFRRFPSAREGDLTRM
RSRLVSKPSLEGVARELRLDMSLRLGKGEESQGGRERGSLLSDALEAMLG
AVFLDAGYIAAKGVVMRILGPHFPEALVPVRTKDYKSQLQELTQKLFRDR
PVYTLLGSSGPEHDKQFDVRVVLPDGTVFEATGPSMKRAEQMAAARAVAT
LDK
>DVU2467 rnr, ribonuclease R
MAKDKTSRKAPMGSGRDALMQAFREAQRPLRLDMLLRILGLHRKEKRTLE
ESLEALQAEGRILRLRGGAWGLTDHMKMVTGTLQVQRTGMGFVLPEDRRR
TDIYVHPTQMGEAWHGDKVVVVLLPGGRGRNPEGRIVRILERGLKEMPAR
VVKRMGRQGLLCRAADARIKVHFLVDVTGLEGKPQKDDILVVSPGERVED
GLWAATAVRHLGSEDDVSVQERLVKINHGVPTEFPVPVLEEAATLPPAPG
GGDFADRIDLRHMEFVTIDGARARDFDDAICVEEQGKGWRLWVAIADVSH
YVRPGSAMDREALERSNSYYFPQSVEPMLPEALSNGLCSLNPRVPRLAMV
AEIYFFGEGSPGKCKFYPAVIESKARLTYGQVNRALLLGDEEERLVLRPV
LPMLEQAEKLARVLHQRRRERGSLDFDLPEPEIAFNIYGETVDIRRKVRH
FGHQIVEEFMIAANEAVARFLTEKEADFLYRVHPEPEPEKLSALFKVLAG
TDIAQGLPREASAGALQTVLQKAHGSAQEFLISRLTLRTMMQARYSPEHE
GHFGLASACYCHFTSPIRRYADLVVHRALKRALGGDPGPTPAGGKLVAIA
DQLSQHERKAMEAEREILKRLTVLLLRSRVGETLTGVISSILDFGFFVEL
NEVLADGMVRLSSLDDDYYAFIPERQELRGERTGRTFRLGQQVKVRLADV
NVGRLEVNLELVREEGDDTPVPTRRRSAASGRDGSGRDGSGRGGRGRSRH
DATPRVKASPDASPEVSADGDMPDGDRLPPWIRAATEEDDPRDTTRTRRR
RDDDASSRDGGDRRRGRSRNEGARGAGNPARGKAPRDGAGGDRKKGDGRD
GKDGQAGGKPAGKGQSRKGKASSHRKGQGRVKKSDE
>DVU1329 rpoA, DNA-directed RNA polymerase, alpha subunit
MLIKQGDRLINTRNWSELVKPEQISRDGEVSDTMYGKFVCEPLERGYATT
IGNAMRRVLLSSLQGAAFVAVKISGVQHEFTTIPGVLEDVTDVVLNLKQV
RLAMDTEEPQYLELKVDKRGAITAGDVRTNQHVMVLNPDQHIATLTEDIE
LTFELEVRMGKGYVPADMHEGLSEEIGLIKLDASFSPVRKVAYTVEQARV
GQMTNYDKLILEVWTDGSVSPEDAIAYSAKIIKDQISVFINFDERISGEN
SNGSADSGEFNEHLFKSIDELELSVRATNCLKSANIALVGELVQKSENEM
LKTKNFGRKSLDEIRRVLGDMGLDFGTKVDGFEKKYQEWKRKQQHEA
>DVU2928 rpoB, DNA-directed RNA polymerase, beta subunit
MGQLTKKFGKIDVSLPIPHLLNLQVDSYVKFLQEGATERRHDEGLEGVFR
SVFPIEDFNRTASLEFVSYEVGEPKYDQPECISKGLTYEAPIRIKVRLVV
YDVDEDSGNRTIRDIKEQEIYFGTLPLMTEKGTFIINGTERVIVNQLQRS
PGIIFEHDSGKTHSSRKVLYSCRIIPMRGSWLDFDFDHKDILYVRIDRRR
KMPATILFKAMGMSKTDILDYFYKKEFYRLDPMGRLMWEVQKDMYRKDSA
FVDIEDGKGGTIVKAGKPITKRAWRLISEAGLETIEVAPDTIEGMFLAED
IVNPATGEVLAEAADEITASLVENLREAGISRLPVLHTKGLETSSSLRDT
LVLDKTPDMEAAQVEIYRRLRPSSPPTPEIAASFFDNLFRSADYYDLSPV
GRYKLNQRLGIDQSVDLRTLTDDDILRAIRVLLHLKDSHGPADDIDHLGN
RRVRPVGELVENQYRIGLVRMERAIKERMSLQEVSTLMPHDLINPKPVAA
VLKEFFGTSQLSQFMDQTNALSEVTHKRRLSALGPGGLTRERAGFEVRDV
HTSHYGRICPIETPEGPNIGLIVSLTTYAKVNDFGFIETPYRIIREGALT
DEIKFLDASREQGEVVAQANAAVDADGKLADEYVTARVRGDVLMSHRDEV
TLMDISPSQMVSISAALIPFLEHDDANRALMGSNMQRQAVPLLRSEKPIV
GTGMEGDVARDSGACILAEGPGIVRYADATRIIVSYENGLYPDRGGVRAY
DLQKYHKSNQNSCFGQRPTCHPGQIVKKGDVLADGPGIEDGELALGKNLV
VAFMPWCGYNFEDSILISERVVKEDVFTSIHIEEFEVVARDTKLGPEEIT
RDIPNVGEDMLRNLDGSGIIRIGASVKPDDILVGKITPKGETQLTPEEKL
LRAIFGDKARDVKNTSLKVPPGIEGTIIDVKVFNRRSGEKDERTRNIEDY
ETARIDKKEQDHVRALGDALRDRLADTLVGKQIAVTLPGKRKGEVLAEAG
APMTRELLDALPVKRLAGLFKSREVDEMVDTALEDYDRQVAFLKGIYDSK
REKVTEGDDLPPGVIKMVKVHIAVKRKLNVGDKMAGRHGNKGVVSCILPE
EDMPFFADGRPVDIVLNPLGVPSRMNIGQIMETHLGWGAKELGRQLAEML
DSGAAMATLRHEVKDVFRSATIAKLVDEMDDETFRKAVSKLRTGIVTKTP
VFDGASEEDIWSWIERAGMDGDGKTVLYDGRTGDKFYNRVTTGVMYILKL
HHLVDEKIHARSTGPYSLVTQQPLGGKAQFGGQRLGEMEVWALEAYGASY
LLQEFLTVKSDDVTGRVKMYEKIVKGDNFLEAGLPESFNVLVKELMSLGL
NVTLHQEEGKKRPKRVGFMSAL
>DVU2929 rpoC, DNA-directed RNA polymerase, beta prime subunit
MTLDDLFTVRGSAANIANIRNLKAIQITIASPENIREWSYGEVKKPETIN
YRTFKPERDGLFCAKIFGPVKDYECNCGKYKRMKHRGIVCEKCGVEVIAS
KVRRERMGHIELAAPVAHIWFLKTLPSKIGTLLDMTMADLEKVLYFDSYI
VLDPGSTNLTKMQVISEDQYLQVIDHYGEDALTVGMGAEAVRSLLEELNL
EELRVQLREESQATKSQTKKKKLTKRLKIVEAFLESNNKPEWMVMEVIPV
IPPELRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLMELGAPDIIIRN
EKRMLQEAVDALFDNGRRGRAITGTNGRPLKSLSDMIKGKQGRFRQNLLG
KRVDYSGRSVIVVGPKLKLHQCGLPKKMALELFKPFIYSELEKRGLASTI
KSAKKMVEREELVVWDILEEVVREYPIMLNRAPTLHRLGIQSFEPLLVEG
KAIQLHPLVCSAYNADFDGDQMAVHVPLSVEAQIECRVLMMSTNNILSPA
NGSPVIVPSQDIVLGLYYMTVDRSFEKGENMSFCAPWEVVAAYDAGVVAL
HARINVRMEDGKVVRTTVGRILVWELLPHCVPFSMVNTTLTKKNIARLVS
TAYRDAGTKATVILCDRLKDVGYEYATRAGVTIAVKDLTIPSTKKGLIET
AQNEVDDIERQYRDGIITRTEKYNKVVDVWTKATQDVSNEMIREISSDIV
EDPRTGAKEANSSFNSIYMMSTSGARGNQDQMRQLAGMRGLMAKPSGEII
ETPITSSFREGLSVLQYFTSTHGARKGLADTALKTANSGYLTRRLVDVVQ
DVIVSEHDCGTVDGIELTHIKEGGEIKIPLADRALGRVLLYPVYDPETRD
LLFPENTLVDENVAKVLVEREVSSVMIRSALTCQSDRGICTLCYGRDLAR
GHIVNIGETVGIIAAQSIGEPGTQLTMRTFHIGGTASREIERSSFEAQHP
GRVILSRVKAVRNRDGQYMVMGKSGQLAIVDDQGREREKYTLPNGSRLLV
TEGEEIRKGQILAEWDPFNEPFVSEVDGVIRFSDIVEGKTFQEKMDEATR
MTTQTIIEYRTTNFRPSISICDEHGEVKMRGNNIPATYSLPVGAIIMVKN
GQDLQAGDIIARKPRETSKTKDIVGGLPRVAELFEVRKPKDMAVVSEIAG
IVTYAGETKGKRKLVVTPEIGEAKEYLVPKGKHITVTDGDFVEAGDLLTE
GHPELHDILRTRGEKYLARYLTDEIQEVYRFQGVAIDDKHIEVIVRQMLK
KVTVLDPGGTTFLVGEQVDKGEFRVENTRAMGEGRTPATAEPLVLGITQA
SLTTSSFISAASFQETTKVLTEASLRGKMDYLRGLKENVIVGRLIPAGTG
YREYVNTDILVPEQRERPDKFLEDLEENPLLVDIY
>DVU1788 rpoD, RNA polymerase sigma-70 factor
MSNIKEIQQIKSLIAKGKVSGFLTFDEVNKALPAEVNTPEQIEEIIGIFD
QLDIAIVDSEKDGKKISMSPGESEEEAPSEGGLDLSDDEETVDYSSRSTD
PVRMYLREMGSVPLLDRDGEVVIAKKIEMGEQDVLYALVEVPVAVEELVN
VGEDLKQNRIKLKDVVKTIEEDDPSEDEMNQRQRVILLLEEIRTTFKKKR
KVYSKLDECCTLERRVASVQREIMNYKEDIVSRLRDIKLEKTLIDRIIET
VEDYVRQMHNCQRDLSAYILSTGKTQAEIQALFSGLEAREVSPVAASAAL
NMTVEELFSFKEMILGKIEILSRLQDKCCHNVNDLEEVLWRIKRGNSIAM
RAKQELIRSNLRLVVSIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYQR
GYKFSTYATWWIRQAITRAIADQARTIRIPVHMIETINKLIRTSRYLVQE
LGRDPTPEEIAERMDYPIDKVKKVLKIAKEPISLETPIGDEEDSSLGDFI
EDKKAVAPAEEVVNTKLGEQIASVLADLTPREEQVLRKRFGIGEKSDHTL
EEVGKLFNVTRERIRQIEAKALRKLRHPVRSQTLRSYYES
>DVU1628 rpoN, RNA polymerase sigma-54 factor
MALELRQQLKLSQQLVMTPQLQQAIRLLQLSRLELVETVQQELLENPFLE
EGMDEGAASSASEASSRKDESAPEAYDRELSRNADWEDYLGEFASSSRQA
QVRETELPEEMTAFEARYSARPSLEGHLMWQLRLSRLTEDQKGIGETIIG
NIGSSGYLQASVEDIAEMCGADASEVIPVLHAVQRFDPVGVASRTPQECL
LIQIEMLGYDRDRVLVELVRDHLEDLETRRYKPLLRKFKLDMDDLKEYLD
IIQSLDPMPGSSFGGSDPMFVSPDVFVYKYDDEFVIVLNDDGLPHLQLSS
LYDQSLAGVTGKDKDFVQEKVRSASWLIKSLYQRQRTLYKVVESIIKYQR
GFFEDGVTRLRPLILKDIADDISMHESTVSRITTNKFVATPHGVFELKFF
FNSALELDDGSQVGSESVKALIKKLIGEENPKEPLSDERIGEILKEQLQV
NIARRTVAKYRTAMNIPSSSKRKEVF
>DVU3242 rpoZ, DNA-directed RNA polymerase, omega subunit
MARITVEDCQKRIDNRFLLVQMAIKRVQQYREGYEPLVDSKNKEVVTALR
EIAAGKVMPEDLALYRPAEGEEMPVAE
>DVU2907 umuD, umuD protein
MKRHTVPDDSPTSNRGQGHAATDRVVPCAVPVKDPPRLSRPLMLSRVAAG
FPSPADDYIDRSLDLNDHIVKHPAATFYVRASGESMLGAGVHDGDLLVVD
RALDPRPGRVVIAAVDGELTVKRLVREGGRLLLAPENAAYPPLDITGRED
VEVWGVVTHVVHAL