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COG category: Transcription
Organism: Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, Hildenborough

Number of genes found: 136

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Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, Hildenborough
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA DVU0269 transcriptional regulator, rrf2 protein, putativeSubName: Full=Transcriptional regulator, rrf2 protein, putative; chromosome CDS310226 498 + 0.620482
NA DVU0749 DNA-binding response regulatorSubName: Full=DNA-binding response regulator; chromosome CDS839102 930 - 0.646237
NA DVU2464 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS2570171 1584 + 0.625
NA DVU2319 transcriptional regulator domain proteinSubName: Full=Transcriptional regulator domain protein; chromosome CDS2414335 657 + 0.666667
NA DVU2788 transcriptional regulator, ArsR familySubName: Full=Transcriptional regulator, ArsR family; chromosome CDS2891957 363 - 0.61708
NA DVU2111 transcriptional regulator, LysR familySubName: Full=Transcriptional regulator, LysR family; chromosome CDS2206454 903 + 0.654485
NA DVU0569 sigma-54 dependent transcriptional regulatorSubName: Full=Sigma-54 dependent transcriptional regulator; chromosome CDS634415 1581 + 0.632511
NA DVU2676 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS2787609 267 + 0.569288
NA DVU0436 transcriptional regulator, TetR familySubName: Full=Transcriptional regulator, TetR family; chromosome CDS489845 756 + 0.592593
NA DVU2827 sigma-54 dependent transcriptional regulatorSubName: Full=Sigma-54 dependent transcriptional regulator; chromosome CDS2934393 1422 + 0.600563
NA DVU0257 acetyltransferase, GNAT familySubName: Full=Acetyltransferase, GNAT family; chromosome CDS300822 465 + 0.587097
NA DVUA0025 response regulator receiver domain proteinSubName: Full=Response regulator receiver domain protein; EC=2.7.3.-; pDV CDS30780 462 - 0.664502
NA DVU1967 transcriptional regulator, rrf2 protein, putativeSubName: Full=Transcriptional regulator, rrf2 protein, putative; chromosome CDS2042526 522 + 0.622605
NA DVU2440 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS2546391 924 - 0.658009
NA DVU2246 S1 RNA binding domain proteinSubName: Full=S1 RNA binding domain protein; chromosome CDS2341713 2172 + 0.67035
NA DVU2251 DNA-binding proteinSubName: Full=DNA-binding protein; chromosome CDS2346940 561 - 0.606061
NA DVU2532 transcriptional regulator, MerR familySubName: Full=Transcriptional regulator, MerR family; chromosome CDS2643711 384 - 0.643229
NA DVU3131 transcriptional regulator, putativeSubName: Full=Transcriptional regulator, putative; chromosome CDS3277423 948 + 0.607595
NA DVU1144 transcriptional regulator, Cro/CI familySubName: Full=Transcriptional regulator, Cro/CI family; chromosome CDS1239484 768 + 0.542969
NA DVU1138 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1234307 633 - 0.657188
NA DVU0525 transcriptional regulator, MarR familySubName: Full=Transcriptional regulator, MarR family; chromosome CDS598268 669 + 0.61136
NA DVU1674 transcriptional regulator, putativeSubName: Full=Transcriptional regulator, putative; chromosome CDS1754716 615 + 0.595122
NA DVU1970 response regulatorSubName: Full=Response regulator; chromosome CDS2045022 408 + 0.627451
NA DVU2588 DNA-binding response regulatorSubName: Full=DNA-binding response regulator; chromosome CDS2712233 681 - 0.63583
NA DVUA0003 hypothetical proteinSubName: Full=Uncharacterized protein; pDV CDS1740 3396 + 0.676384
NA DVU2106 sigma-54 dependent transcriptional regulatorSubName: Full=Sigma-54 dependent transcriptional regulator; chromosome CDS2200357 1377 + 0.658678
NA DVU1557 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1634075 216 - 0.578704
NA DVU1519 transcriptional regulator, putativeSubName: Full=Transcriptional regulator, putative; chromosome CDS1588433 675 + 0.517037
NA DVU1402 transcriptional regulator, LysR familySubName: Full=Transcriptional regulator, LysR family; chromosome CDS1471525 996 + 0.658635
NA DVU0057 transcriptional regulator, TetR familySubName: Full=Transcriptional regulator, TetR family; chromosome CDS63889 642 + 0.633956
NA DVU3360 ParB family proteinSubName: Full=ParB family protein; chromosome CDS3530486 915 + 0.619672
NA DVU0321 transcriptional activator, putative, Baf familyRecName: Full=Type III pantothenate kinase; EC=2.7.1.33; AltName: Full=PanK-III; AltName: Full=Pantothenic acid kinase; chromosome CDS364219 789 + 0.65019
NA DVU3313 transcriptional regulator, LysR familySubName: Full=Transcriptional regulator, LysR family; chromosome CDS3489178 891 - 0.680135
NA DVU2275 sigma-54 dependent transcriptional regulatorSubName: Full=Sigma-54 dependent transcriptional regulator; chromosome CDS2363991 1455 + 0.64055
NA DVU0509 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS583287 231 - 0.666667
NA DVU3142 sigma-54 dependent transcriptional regulatorSubName: Full=Sigma-54 dependent transcriptional regulator; chromosome CDS3290118 1704 - 0.661972
NA DVU1760 transcriptional regulator, TetR familySubName: Full=Transcriptional regulator, TetR family; chromosome CDS1824953 585 - 0.540171
NA DVU0063 transcriptional regulator, MarR familySubName: Full=Transcriptional regulator, MarR family; chromosome CDS75421 441 + 0.630385
NA DVU2633 transcriptional regulator, putativeSubName: Full=Transcriptional regulator, putative; chromosome CDS2748792 774 + 0.624031
NA DVU0030 transcriptional regulator, GntR familySubName: Full=Transcriptional regulator, GntR family; chromosome CDS36482 1503 - 0.680639
NA DVU3207 RNB-like family proteinSubName: Full=RNB-like family protein; chromosome CDS3372044 2097 + 0.665713
NA DVU2582 transcriptional regulator, TetR familySubName: Full=Transcriptional regulator, TetR family; chromosome CDS2703645 588 + 0.573129
NA DVU0722 response regulatorSubName: Full=Response regulator; chromosome CDS803442 1557 + 0.624277
NA DVU0309 transcriptional regulator, LysR familySubName: Full=Transcriptional regulator, LysR family; chromosome CDS353856 921 + 0.698154
NA DVU3215 response regulatorSubName: Full=Response regulator; chromosome CDS3382952 366 - 0.644809
NA DVU2036 helix-turn-helix protein, CopG familySubName: Full=Helix-turn-helix protein, CopG family; chromosome CDS2116661 240 - 0.55
NA DVU0529 transcriptional regulator, rrf2 protein, putativeRecName: Full=Protein rrf2; chromosome CDS601638 453 - 0.607064
NA DVU1584 sigma 70 family proteinRecName: Full=RNA polymerase sigma factor; chromosome CDS1666207 1071 - 0.585434
NA DVU1690 transcriptional regulator, TetR familySubName: Full=Transcriptional regulator, TetR family; chromosome CDS1768176 570 + 0.550877
NA DVU1338 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1415889 585 - 0.642735
NA DVU0479 serine/threonine protein kinase, putativeSubName: Full=Serine/threonine protein kinase, putative; chromosome CDS544595 1500 + 0.665333
NA DVU1181 response regulatorSubName: Full=Response regulator; chromosome CDS1271372 1071 - 0.61718
NA DVU1645 transcriptional regulator, ArsR familySubName: Full=Transcriptional regulator, ArsR family; chromosome CDS1724829 345 - 0.455072
NA DVU0024 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS27468 171 + 0.596491
NA DVU2567 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS2680076 705 - 0.632624
NA DVU0682 DNA-binding protein, putativeSubName: Full=DNA-binding protein, putative; chromosome CDS756252 789 - 0.608365
NA DVU3123 HD domain proteinSubName: Full=HD domain protein; chromosome CDS3271204 696 - 0.622126
NA DVU3310 ATP-dependent RNA helicase, DEAD/DEAH familySubName: Full=ATP-dependent RNA helicase, DEAD/DEAH family; chromosome CDS3486594 1599 + 0.676048
NA DVU1858 cold shock domain proteinSubName: Full=Cold shock domain protein; chromosome CDS1925817 537 - 0.588454
NA DVU2886 transcriptional regulator, AraC familySubName: Full=Transcriptional regulator, AraC family; chromosome CDS2984227 840 + 0.669048
NA DVU2423 transcriptional regulator, putativeSubName: Full=Transcriptional regulator, putative; chromosome CDS2528735 480 + 0.641667
NA DVU2194 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS2291229 690 + 0.665217
NA DVU1744 DNA-binding proteinSubName: Full=DNA-binding protein; chromosome CDS1811183 243 - 0.54321
NA DVU2690 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS2804317 588 + 0.651361
NA DVU1754 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1820331 408 + 0.627451
NA DVU2909 transcriptional regulator, MarR familySubName: Full=Transcriptional regulator, MarR family; chromosome CDS3010822 414 + 0.637681
NA DVU2086 transcriptional regulator, GntR familySubName: Full=Transcriptional regulator, GntR family; chromosome CDS2176130 1443 - 0.625087
NA DVU3088 ATP-dependent RNA helicase, DEAD/DEAH box familySubName: Full=ATP-dependent RNA helicase, DEAD/DEAH box family; chromosome CDS3229894 1734 + 0.6609
NA DVU2028 conserved domain proteinSubName: Full=Conserved domain protein; chromosome CDS2111168 228 - 0.535088
NA DVU2149 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS2247518 1740 - 0.665517
NA DVU2359 sigma-54 dependent transcriptional regulatorSubName: Full=Sigma-54 dependent transcriptional regulator; chromosome CDS2456656 1656 + 0.655193
NA DVU2819 transcriptional regulator, TetR familySubName: Full=Transcriptional regulator, TetR family; chromosome CDS2924948 609 + 0.632184
NA DVU2836 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS2940609 447 + 0.543624
NA DVU2675 DNA-binding response regulator, LuxR familySubName: Full=DNA-binding response regulator, LuxR family; chromosome CDS2786675 684 - 0.653509
NA DVUA0137 response regulatorSubName: Full=Response regulator; pDV CDS178783 648 - 0.637346
NA DVU0330 response regulatorSubName: Full=Response regulator; chromosome CDS372996 1239 - 0.653753
NA DVU2956 sigma-54 dependent transcriptional regulatorSubName: Full=Sigma-54 dependent transcriptional regulator; chromosome CDS3064162 1038 - 0.623314
NA DVUA0099 HAMP domain proteinSubName: Full=HAMP domain protein; pDV CDS133570 2184 - 0.688187
NA DVU3186 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS3346150 822 - 0.666667
NA DVU2378 transcriptional regulator, AraC familySubName: Full=Transcriptional regulator, AraC family; chromosome CDS2475614 693 + 0.663781
NA DVU2686 peptidase, S24 familySubName: Full=Peptidase, S24 family; chromosome CDS2799591 783 - 0.53129
NA DVU3066 DNA-binding proteinSubName: Full=DNA-binding protein; chromosome CDS3202265 570 - 0.626316
NA DVUA0086 response regulatorSubName: Full=Response regulator; pDV CDS114998 1092 - 0.661172
NA DVU2577 DNA-binding response regulator, LuxR familySubName: Full=DNA-binding response regulator, LuxR family; chromosome CDS2690356 651 + 0.589862
NA DVU2953 transcriptional regulator, GntR familySubName: Full=Transcriptional regulator, GntR family; chromosome CDS3060107 1563 + 0.652591
NA DVU2085 Snf2 family proteinSubName: Full=Snf2 family protein; chromosome CDS2172708 3168 + 0.614899
NA DVU2644 transcriptional regulator, GntR familySubName: Full=Transcriptional regulator, GntR family; chromosome CDS2760784 672 - 0.575893
NA DVU0145 response regulatorSubName: Full=Response regulator; chromosome CDS180029 408 - 0.654412
NA DVU0394 radical SAM domain proteinSubName: Full=Radical SAM domain protein; chromosome CDS442741 1023 - 0.666667
NA DVU2802 transcriptional regulator, GntR familySubName: Full=Transcriptional regulator, GntR family; chromosome CDS2904939 696 + 0.66954
NA DVU2785 transcriptional regulator, GntR familySubName: Full=Transcriptional regulator, GntR family; chromosome CDS2890512 714 - 0.638655
NA DVU0277 transcriptional regulator, AraC familySubName: Full=Transcriptional regulator, AraC family; chromosome CDS320357 981 + 0.61366
NA DVU0854 NirD protein, putativeSubName: Full=NirD protein, putative; chromosome CDS944038 531 - 0.612053
NA DVU2799 transcriptional regulator, MarR familySubName: Full=Transcriptional regulator, MarR family; chromosome CDS2900849 417 - 0.611511
NA DVU2364 aminotransferase, classes I and IISubName: Full=Aminotransferase, classes I and II; chromosome CDS2461234 1167 - 0.644387
NA DVU1331 transcriptional regulator, LysR familySubName: Full=Transcriptional regulator, LysR family; chromosome CDS1407515 927 + 0.578209
NA DVU3167 heme biosynthesis protein, putativeSubName: Full=Heme biosynthesis protein, putative; chromosome CDS3323356 483 + 0.627329
NA DVU0606 transcriptional regulator, ArsR family/methyltransferase, UbiE/COQ5 familySubName: Full=Transcriptional regulator, ArsR family/methyltransferase, UbiE/COQ5 family; chromosome CDS674210 924 + 0.623377
NA DVU2968 sensor histidine kinase/response regulatorSubName: Full=Sensor histidine kinase/response regulator; chromosome CDS3073821 1197 - 0.645781
NA DVU1142 transcriptional regulator, putativeSubName: Full=Transcriptional regulator, putative; chromosome CDS1238531 270 - 0.614815
NA DVU0629 transcriptional regulator, TetR familySubName: Full=Transcriptional regulator, TetR family; chromosome CDS696323 561 + 0.55615
NA DVU1572 transcriptional regulator, CarD familySubName: Full=Transcriptional regulator, CarD family; chromosome CDS1655325 516 - 0.565891
NA DVU1745 DNA-binding proteinSubName: Full=DNA-binding protein; chromosome CDS1811492 540 + 0.551852
NA DVU1964 transcriptional regulator, rrf2 protein, putativeSubName: Full=Transcriptional regulator, rrf2 protein, putative; chromosome CDS2041408 513 - 0.590643
NA DVU1518 transcriptional regulator cI, truncationSubName: Full=Transcriptional regulator cI, truncation; chromosome CDS1588107 291 - 0.5189
NA DVUA0084 transcriptional regulator, AbrB familySubName: Full=Transcriptional regulator, AbrB family; pDV CDS111110 192 + 0.583333
flgM DVU0523 negative regulator of flagellin synthesis FlgMSubName: Full=Negative regulator of flagellin synthesis FlgM; chromosome CDS597294 315 - 0.603175
fliA DVU3229 RNA polymerase sigma factor for flagellar operon FliARecName: Full=RNA polymerase sigma factor; chromosome CDS3396820 798 - 0.614035
greA DVU3245 transcription elongation factor GreARecName: Full=Transcription elongation factor GreA; AltName: Full=Transcript cleavage factor GreA; chromosome CDS3414783 492 + 0.599594
hrcA DVU0813 heat-inducible transcription repressor HrcARecName: Full=Heat-inducible transcription repressor HrcA; chromosome CDS900335 1068 - 0.656367
hypB DVU2329 hydrogenase accessory protein HypBSubName: Full=Hydrogenase accessory protein HypB; chromosome CDS2425178 675 + 0.64
iciA DVU0594 chromosome initiation inhibitorSubName: Full=Chromosome initiation inhibitor; chromosome CDS662909 903 + 0.662237
lytR DVU0596 DNA-binding response regulator LytRSubName: Full=DNA-binding response regulator LytR; chromosome CDS664472 774 + 0.647287
mfd DVU1903 transcription-repair coupling factorRecName: Full=Transcription-repair-coupling factor; Short=TRCF; EC=3.6.4.-; chromosome CDS1977379 3483 - 0.638817
nifA-1 DVU1949 nif-specific regulatory proteinSubName: Full=Nif-specific regulatory protein; chromosome CDS2021083 1590 - 0.607547
nifA-2 DVUA0143 Nif-specific regulatory proteinSubName: Full=Nif-specific regulatory protein; pDV CDS184786 1548 - 0.681525
nikR DVU2891 nickel responsive regulatorRecName: Full=Putative nickel-responsive regulator; chromosome CDS2988755 420 + 0.6
nusA DVU0510 N utilization substance protein ASubName: Full=N utilization substance protein A; chromosome CDS583521 1287 - 0.62704
nusB DVU1197 N utilization substance protein BRecName: Full=N utilization substance protein B homolog; Short=Protein NusB; chromosome CDS1289617 462 - 0.636364
nusG DVU2923 transcription antitermination protein NusGRecName: Full=Transcription termination/antitermination protein NusG; chromosome CDS3021239 552 + 0.572464
phoB DVU1083 phosphate regulon transcriptional regulator PhoBSubName: Full=Phosphate regulon transcriptional regulator PhoB; chromosome CDS1187127 690 + 0.618841
pspA DVU2988 phage shock protein ASubName: Full=Phage shock protein A; chromosome CDS3094671 666 - 0.65015
pspC DVU2986 phage shock protein CSubName: Full=Phage shock protein C; chromosome CDS3093874 423 - 0.621749
pspF DVU2989 psp operon transcriptional activatorSubName: Full=Psp operon transcriptional activator; chromosome CDS3095502 1146 + 0.682373
relA DVU2083 GTP pyrophosphokinaseSubName: Full=GTP pyrophosphokinase; EC=2.7.6.5; chromosome CDS2168573 2154 - 0.630919
rhlE DVU1982 ATP-dependent RNA helicase RhlESubName: Full=ATP-dependent RNA helicase RhlE; chromosome CDS2058879 1389 - 0.680346
rho DVU1571 transcription termination factor RhoRecName: Full=Transcription termination factor Rho; EC=3.6.4.-; AltName: Full=ATP-dependent helicase Rho; chromosome CDS1653748 1251 - 0.58753
rnc DVU1440 ribonuclease IIIRecName: Full=Ribonuclease 3; EC=3.1.26.3; AltName: Full=Ribonuclease III; Short=RNase III; chromosome CDS1516953 762 + 0.594488
rnr DVU2467 ribonuclease RRecName: Full=Ribonuclease R; Short=RNase R; EC=3.1.13.1; chromosome CDS2573308 2661 - 0.65652
rpoA DVU1329 DNA-directed RNA polymerase, alpha subunitRecName: Full=DNA-directed RNA polymerase subunit alpha; Short=RNAP subunit alpha; EC=2.7.7.6; AltName: Full=RNA polymerase subunit alpha; AltName: Full=Transcriptase subunit alpha; chromosome CDS1405939 1044 + 0.568008
rpoB DVU2928 DNA-directed RNA polymerase, beta subunitRecName: Full=DNA-directed RNA polymerase subunit beta; Short=RNAP subunit beta; EC=2.7.7.6; AltName: Full=RNA polymerase subunit beta; AltName: Full=Transcriptase subunit beta; chromosome CDS3024679 4119 + 0.621996
rpoC DVU2929 DNA-directed RNA polymerase, beta prime subunitRecName: Full=DNA-directed RNA polymerase subunit beta; Short=RNAP subunit beta; EC=2.7.7.6; AltName: Full=RNA polymerase subunit beta; AltName: Full=Transcriptase subunit beta; chromosome CDS3028905 4158 + 0.622415
rpoD DVU1788 RNA polymerase sigma-70 factorRecName: Full=RNA polymerase sigma factor RpoD; AltName: Full=Sigma-70; chromosome CDS1851002 1773 - 0.577552
rpoN DVU1628 RNA polymerase sigma-54 factorRecName: Full=RNA polymerase sigma-54 factor; chromosome CDS1712453 1431 + 0.544375
rpoZ DVU3242 DNA-directed RNA polymerase, omega subunitRecName: Full=DNA-directed RNA polymerase subunit omega; Short=RNAP omega subunit; EC=2.7.7.6; AltName: Full=RNA polymerase omega subunit; AltName: Full=Transcriptase subunit omega; chromosome CDS3413030 234 + 0.602564
umuD DVU2907 umuD proteinSubName: Full=UmuD protein; EC=3.4.21.-; chromosome CDS3009177 495 - 0.656566