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# Mycoplasma synoviae 53, 53

>MS53_0127 conserved hypothetical protein
MKNKKLTYSEISQISGISIASISRYYRDGYLSKEKKLILEKIISDYGLET
KDHFKLTKTVNYNLIFALIPQWQNHKFSPIISGLVNEANKVKQKVFNLYY
NTDKNDFIENIYLALKHNPIGIVVFFNKKNEEQLEFLKKLSDQCNIFIYG
YTYDGLNSIKIDFTKAFYKLAYFMDLYFLSKKNIAKKLVYVFNNKTEKAI
QNEKIAGIENYAKKNNIETAFYNLNLYSKKDVASFFEFCKKGSYKYIVSS
TREIFASLMAGNSDNLYITDIGYISIYDQIRNYLLKIHIDYPNIGIEFHR
MISSYLLESESGTINKNMEVEIIK
>MS53_0109 conserved hypothetical protein
MGFIIFNMLSDKNKTEQILEYLMELIQTGQMPPNKIMPSQHQLMKRFECS
RNIIAAAYKKLEFLGAVYSISKRGYFVSENFHNLIKPLSFLLGVSRQDGY
EIKNVDTLPDWATKKHIIFTNGFRTFFKNYFKEDKLIAESEIFLSLKCVS
KKENINLNIPITDLLIRRKILTNVVYQIEFEKIIKFGANPSVAVIFYGYD
ADSICIDGKFYVDPENFKFYHQEFSLN
>MS53_0095 conserved hypothetical protein
MIEALLYIQGDEGLNLEQVKEVFNLNNTHEAKKIMQDFQKDFNNLDRGLK
VVVFDEIFKLATRESVRAYVSKLVTTTGKQRLTSAAIEVAGIIAYKGPIT
RGQISKIRGAVSDHIVNNLLKKGIIHEVGVSHTQGNPVLYEVSSQFYDHF
KISSKQDLPKMRDFDYSDGFEDESEFDIFQSQREI
>MS53_0006 conserved hypothetical protein
MKLVIDVGNSYLKIGVFHDLELIELKKFKTKYFKISYFENFYKKVFAKYK
FNLFIVFGSVVPSIEQKFLDFVKENNLENNFFLINNYLKLSFKVPQEKLG
LIGNDLLGAMEYASKETSNALIFLFGTASVALLLEKLNFSGAIIAPGMNF
SFNNLLSKAKKLKGFKLHKENVSLWNLNTQDALESGYENLKNGFIKQIIC
KSNSNYPVYISGGDISNLSPEISHQFVDNIVLKGYLLIYLKNC
>MS53_0324 hypothetical protein
MTQNKPKTQRQKRIEKIQILYQVELLNLQKDFDFVLNMEPYLDAKQTKEV
FVVLKNYDYFKNFLESLLDPSWNWQRLSYMLRAILLNACAEFEFIDARIV
INEAVEITKIFFQLTSDTSAKEYNSIDYNLFKFTNALLETYYKTKVKIEA
IKSNVK
>MS53_0548 conserved hypothetical protein
MVAKELNITVSQVETVLNYFKEGATVPFIARYRQSQTNNLNEEQIYAIQS
LYLYASELSKRKEKIIEKLKELNLLNNDLEQKINSCTKKSELESIYEPYK
SGKITKAKMAIELGLMPLALKIWNNKNSRFDLNFEARKFLSDKLKTLDEV
ILNVNYILSQKISEDFDLREKLKENILAYGKLICKKTKEQDENDRFKNYY
QYSTPIKYVKNHNIMAINRGSNLKKIKWDVYLNFEILERISLRKITKFKF
NEALLKDAVNDALKRLILPSLKNKIFSDLFDEAEKKSIEIFSNNVETLLS
APAVSGHNILAIDPGYVSGCKLAALSEKGSVLEIATIYPNEPRSNVSQAK
TKVLELIKKHNITIIVIGNGTASRETEQFINNLIQENNLDNIYFCIVSEA
GASVYSASEIAIEEFPNLSVEKRSAINIGRKFLDPLNELVKIDPKSIGVG
QYQHDVNQKELQNYLNFKVQKVVNNYGVDLNSASREILSYISGLDKKTSQ
NIINYRNKNKSFKSRDEVLKVDGIGPKTFEQSIGFLRVFNSSNFLDKTAI
HPESYSLANKIISEYKLIPSEEGIKNLELNAKELSEKYSSSIEEINLILS
SLKNPTKIIRSSKQGYLLKKNLINLENLKIGDIVDATIDNITDFGLFCYI
GLKESLFVHISNLAKKGNIYESYNLNNLIKVEITEINKENKKISGKEI
>MS53_0511 conserved hypothetical protein
MMKLNKKVLLYSGAALAGVATISGLVAGKINFKYKPSIWNYKSYISDENL
RVIDKNFDYKQFDTISQFSNALINNKAVAGIGSDFFAFNLVKNNHIQKID
YSKLFGVPELKDFNTLQKFMQLILKPEIWNHFNNKYYTKALNEISKNKSQ
DQYLWEYMFPYYSQDAVLAYNIKKVNIPEKYKLEDGSANFDLIYSDMNLT
GDKNSMVNLLKMLNFIGYKEIIWTDAVRDNMLYGSAYTRLQNGSSTDKNY
TGNVTFDNYKNQIDSFTNLIKDGTSNDVKDNQKITFEGDGLQIVNTLLDP
TRFDITSSLMYNGDAIDAYYGEDNFESVGDGAIRVVKFKNNLLLVDGLVV
AATNNDETNELIYDTLRNSWIKNVGNIYTQYKDLLSKNLISDSDSVETQQ
KVLTESAVADYWKDFRNIDFESFAEDNDFEQSAATETLDKYYSMLNLALV
ENKDKFNSFYEMQDDPDADFEEKINPYPSIFLSYLKDNKDELLDKIVSSY
KNNSLKDLLEEQDNFEDKYLVNLVNENYEDLTSEDYYPTSTEDSELKESL
SQFLANALSFIDISEDQYSDLLTEKYLNLNNYDHINYDPTQNIDYEFIKR
NYFASALDGQDENALNIYQIVKTDEVDYKGIEPISQDLQSLVDSYYYNRT
KS
>MS53_0379 greA, transcription elongation factor GreA
MEQEKIFLSQETLDKYKKEYEKLVKVDRVEIQNALKEARAQGDLSENAEY
DVARDKQAVVEARILELEGILDKAQLIKHKDENTISIGSKVTFLDLSTNK
EDEVTIMGIHDADPFNKKISNYSPLATAMMSKKEGDTVEVEGLEKYEIKI
ISVHNRD
>MS53_0353 hrcA, heat-inducible transcription repressor
MKQLKKQHEEILKAVVGAYLTQKNEISSALLVKNYGIKFSPAKVRYLMTA
LEDEGLLVKETKSSGRKPTNKGLEYYAKFLSNAFDLKLINNLEKIFLNRK
DNIYNTIEEVTKELASLTGATFVTKFKDPNLILKSINLFEVSESLATIIL
VVSNGEVLSRKIDIPENKAIKISDLKIAMNIFQDNLIDCKLIDLEKRILL
LKDILAEKIIQYEDVIESYVKSILGIGIKSQIYGRENIILSRKIAREDVN
EILNILEKNSIWDALEKNSNDFEEIRISINSKGAFFSKRIDENNNLTEIS
VVAPNESDSNSIKSGIMLLTKIITNNINEKEKDKNERKHS
>MS53_0195 nagC, N-acetylmannosamine kinase
MFALDIGGTSIKYGIIDFKYDILFSSSVKTKKEKMIFQVEKLILEAKKSY
DFDYVAISSAGVVDSNSNKITYTNSDYRVWTGFDFNIVARNTNTKIAMIN
DANAAALSELVSKKHDSFVSITLGTGLGAGIVYNGEIFQGKNFLGGEIGN
NLAFKNQKEKINEGLSFSRFNKKISQKFKIKSKTPSVYYPKLYKENQDFK
VLFNNYASKLAYWSFVIAIILNVDHVYIGGAFSFVDDFLFDKAKDIFISM
QDDSPYKISFSKASYKNNAGIIGATYFLKQKFNLA
>MS53_0685 nusA, N-utilization substance protein A
MMAKKKEKDTFKNASNSKKWFLLLNSFSKNKEISNDEFIAMSQEVINHII
NRKLDPEAEVVFSVDNEKEEILLLNKNTEVVEDSEAAMYDELLGISYIGL
SKAKEVNKNAKVGDLISYPIEFNSFDQKNLVAMRNGFSAAIAEKAKNRLF
AKYHPLIGSKLMVQIASKHENGGFFLKLEDGTSAYLPKNSIIKSVELNPG
QKFDVFLNSVNIDAKGLYLEVTMTSPEQVRDVLFREIPEIANGDLIIRNI
QRIPGERSKVVVSLNPEKQSAHTHDLLGAMFGNKAQRINDVSKSLNNEKI
DVIRFAENPKDFIRNAMSPCPVVDVVKSKKGFYVIVRPEDVSLAIGSNGV
NVSLASKVTNNKIDVLSTEQAFQEKIYFQDNYVPVHYTPRERNKNNFKKQ
ARERASFGFDFGIEEFSKDVANFISKVELEDLLKEDKAQETKQTEVAKPA
TATSVKKPAKSTKLKTEAVDFNAYFDETNLKAGALSDEYSFVNKLDEYQQ
FENEFSGQSVEEEIKETQKQKVKKEKISAFSKNFKIDEDLLSYGLSKDLD
LSDLDDEKWKK
>MS53_0361 nusG, transcription antitermination protein
MQNSKFRWYLISTITGKEAVIVEALKNRIKSENIEQFFDFSATEDGPFKV
FKVPSITKTELNKKQKGLAYKVKWKNMFPGYIFVKADMQDLVWYIIRNTL
QVTGIIGSGGGGEKPTPVSQNQIRKSLEKEEEAKKLFEENKNLLNLKVGD
LVLITDGNWVGNEAVIEKIIVEDNMAEISFEDFNKKVEFKINLDWLTRIE
RN
>MS53_0121 pknB, serine/threonine-protein kinase
MNDSNVYKKYEIISPLGEGGYANVFKIKSKFNNKYYALKYLNIQNKNSEF
ERFTNEAHLIKNLNTEYVPKIFEFYKDTKEAYMVLELINGSLVSEKLKAH
GRINVKDAVQIIKSIAYAVQEIHSHKIIHRDIKSDNIYITIDGKIKIIDF
GISIEDDVDQQRFTRESSVACSPFFMAPEIVNRNKPINKSVDIYAIGILF
YEMITGKVPFKGKTASETIKKHLSSEIPNPQSEVEEIPNSVVNIIYKALQ
KDPEKRYKNTLDLIFDLENSLNPKFLNQSLFNPKNLQEKKNFSWFIQSKF
FLVFIFSFIALCFIGIFVLLHFFGVY
>MS53_0675 rncS, dsRNA-specific ribonuclease III
MEKDNQPSIEELKAFLQKNNIEYKNIDLFIEATTHKTYSKVNKNSKDYER
LEFLGDSLVGFLISDYCVREFSSLEPGELSRLRSKLVDKLALFKIAQKLK
VEQIIKTGPKKARNEVLSSSNVLSDVVEALIAAIYLDQGMQSAKDFIKSH
FYEIANKAQNKPNKDPKSELQEYFQTISAETVKYETIEIPNKRSFESKAW
HLNKIYGTGVGLSKKDAEKNAAANALSKLKT
>MS53_0024 rpiR, transcriptional regulator
MKKQEKSQISHPILLNNSKLINSENKVLEFINGFQGEVFNYSIEDLAKLA
NVSTATVFRFVRKYGFKNFKEAIIFINKNLQKLNEKYPLSTSQDNNISTI
VAGNKYVLDNLYTNELQKIIEKAAQIIYNSKRILIHGAGSSKRMAETLVS
NLYKVSLNVIAHDDFHLFLPVLGNATTEDVCVLFSDNLNSPEAAFTIKQC
REKKVQIILITSKKKSNLITKNDVVILYEKITSKHLNIPLSSKWSQLLIA
DLLFENLLILDSNLREKLNNSIQIINKWKANL
>MS53_0574 rpoA, DNA-directed RNA polymerase subunit alpha
MEKLTKIKHRIIPAKDSQNNSYKKVLKIKGLERGFGNTLAVALRRILLSN
ITGIAPFCVRIEGVEHEFTALEKVSEDIVTILSNLKKVVLNYDEDYVKDN
QIIKLSLNANEDNRITSNHLTVTNAPRVEVQNKDVEIATLSKPGVLKLEM
FLRAGRGYVDFEDNKKFIEEKEKELKELSSLSKGAFIAMDSVFSPVVNVA
WKVTELNTASLKIEEQLELELETKLGVTPESAIKLACKILVAHFQTIGDL
TDLDSDEIFQSEKQSLEKEEDDMEIRLLNLSMRSQNALAKSGIKTLNELA
SYPIEKLKEIKNLGEKSREEIIRKLNEYGKLKN
>MS53_0485 rpoB, DNA-directed RNA polymerase beta subunit
MMQKDKKNYKLRKFGPITERRDYSITKHSLPVGDILATSKKSYQDFINKK
IEELLNEIYPIEASNKEASLEYEKKSVKFELPFKKAEHENLQIKTCKAKK
TNFSMKVYITLKKVVSQTGVVKKEKILLGEIPYITSSGSFIINGSEKVIV
SQLIRSPGAYFGVSVRNKQSEDLFNKLEILPRIGSWIEVSHKVTSANLDA
IKIKIDKNKNINIVTFLASFGLLADDIRYLFGKNEVLEETIRKNKTIDIT
EFSRQEIMDLCQEKIFRIIRKGDRISEESKRSLLSGMLFDKKRYNLSKTG
RYMLNNKLSLVERITNTYLAQKVVSHLGNTFDVGTYVTYEIAKEIQESFE
AKAKDNKSNLHLEKIPNINPDDVYYKINKDNKSLNKRINIARIKIWPTKR
AMDANETPSEVIGNDPKATEEHLLLSDIIAAISYYLNLTVGIGQDDDPDS
LMNKRIVSVGELLEGELRIALLKLEKATRERMGAKEPDKITAKNVTNNKL
ITNQMKTFFNTSKLAQFMDQINPLAEISNKRRVTSLGPGGLNRDTAQFEV
RDVHSTHYGRICPIETPEGPNIGLILNYAIYSTVNELGFLQTPYYKVNDG
VVDYNDVRYLTSYEEIGYAFAQSSVHVNDKNEIIDEQITIKKDYNYIIGS
PKDIDFLEVSSKQIVSVAAAAIPFLENNDANRALMGSNMQRQAVPLIEAE
APLVATGIEADIAKFSSYNIVANNDGEVIYVDGTKIQVRTAKKIDTYNLK
NFEKSNQGTIIQQKPIVKVGDHVKEGDLLVDGSSFKDGEMALGKNLLVGF
TTWNGYNFEDAIIINERLVKDDVLTSIYIEEQTIQFRISKSSEDIMTRDI
PNVSKYSMRNLDEFGIIKVGSEVVAGDVLVGRISPKGEENPSQEEKLLNA
IFNQRPQNYKDTSLKVKNGHNGTVIHVEVLSRENGDILEDGLDSIIKVYI
AQKRKIKVGDKMAGRHGNKGVISIILPEEDMPHLEDGTPLDIMLNPQGVP
SRMNIGQVLEMHLGMAAKKLGTKFVTPSFDGIKKETIEDLLQEANLDKSG
KQVVIDPITGEKFDNPISVGVIYMLKLNHMVDDKMHARSVGPYSLITQQP
LGGKSQNGGQRFGEMETWALESYGASNILQEILTYKSDDIYSRNLVYKAL
VNDSAIPNPGMPESFNVLSNELKGLLMKLGITETESNSDELIQHFDHLGV
EHE
>MS53_0484 rpoC, DNA-directed RNA polymerase beta chain
MSNTFSKNNVKKIKQISLSLATNEDVLSWSNGVVSKPETINYKTYKPEKD
GLFDEIIFGPVTDFKCPICFTKYKKSDENTICKRTTSCEKIQPKILPKIS
RRSRMGHIALNNPVVHFWFFKINHSTISKLLGLKVAGSNKPVTKSDLEKI
IYYKSHIVLETGGLKSLQKNTIIDINDAADIYAGALEEILEFNKDNKDGY
EEILDTLNDLKEYAASKTGQDYGIDFYEYNEIIEEYSQAKIGTGSKAIEY
LLKNIDLEKESKEIQDEIDTINDQNKYEISSSEALKRNKLYKRLAIIKSF
LKSGQKPENLLIYNLPVIPADLRPLVQLDGGRHSTSDINELYRRIIIRNN
RLEKWYESDAPVLIKQNEFRMLQEAVDALIDNSRKKPGPVTSKDGHPFKS
ISDALVGKKGRFRQNLLGKRVDYSGRSVIVVGPHLKMYQVGIPRDMAAKL
FEPWIINRIMKEEEGINSVKAAKKLVDSLNPIIWPYVEQVLENRPVLLNR
APTLHRLSIQAFQPVLIRGKAIKIHPLVTTAFNADFDGDQMAVHVPISKA
AVREAQELMLASKNILGPKDGEPIINPSQDIILGLYYLTIEKANQKNEGK
FYPSFNEMMLAYENKYINLATRVVLPVSALKKISILQKTDAPYIYSTVGK
FILNNAFPRDFDFVFGKRVTEKLTSTNEHGEEVVSLKTKIDTSEHDIKRY
VFNYGDNFTAKIKEADVNLPLNKKEIAKIVRNIYEKYVPIVNIEDISQVI
NKIDKTQLDNLHELCSELKDFNGNKLEDNRIHLELLVRLIKEEFLKIQDQ
YFAKDEESIFNHKYWELKHYTKLLERVWFRYSNYVSTVLDVIKDLGFKFS
TKSGITISMNDIVTSKTTKERIKKAEEETEALKDYFKKGYLTDDERYTLT
IKKWSDVKESIEKELKKVVDSNLDNPLFMMLSSGARGTYSNFTQLAGMRG
LMNNNTKILKADAENDRVVRSIVEIPVKSSFLDGLTAYEFYSSTHGARKG
LTDTALNTAKSGYLTRRLVEVAQGVVIREEDCGSDYGFVVKDIKDTKTNT
IIESLQERIEGRFTAVPIYDQNGKLIVKESELITPEIASEIVAKGITKVE
IRSVLSCHTRNGLCKKCYGKDLATNRIVNIGEAVGVIAAQSIGEPGTQLT
MRTFHTGGVAGGEDITGGFGRLIELIDAYDQPWGTPAEISRHYGKVKKIE
TQKNKKGKESGQFNISVEYFDEDGNKQTHQYLVKSSQRLRVKQGDEVVAG
QKLSEGPIVLNELLESVDTRAVQNYILKEVQKLYRLQGIAIADKYIEIII
RQMLSKISIIDPGDSSFYSGSLVDAFVYQKENGILLSQGKKPAYGVVKIK
GAKQTPLLSDSWLAAASYQETAKILVDASIAKRTDNLEGLKENIIIGYKI
PAGTNSNFEENGKYNLKEFSSYFPNKYDSTPELKLEEITDENIEEEFDYL
KENTISEEEFENLDDDTMYHLETSDEFEDESFGEDDFEYSEE
>MS53_0455 rpoD, DNA-directed RNA polymerase sigma factor
MDQLKKSKPHQKKWKVEEVLEFIERKKLDIEEEVVDELFDFFAQKNLFKA
DENIVSSEKDLKEEFEEELKAEKKSKSAKDLKLNFNADFDDDLLDEDDSP
LFDSDDDEEFDDDFIEDEEVDVNLEEYDHDEEDEEEDEKLEEDDELDFSL
VASDDDLDELDLDNFSPDEIDLQIDEENKKQDLSNKLTETTDIVKWYMRW
IGKYGKLLTPQEEKDLAEEMDKGGSRGKRARDLIIKRNLRLVVNAAKKYK
NRGLSFIDLVSEGNAGLLKAAQKFDIKKGFKFSTYATWWIRQSISRAVAD
QARIIRVPVHMVETINKIYKIEREIQQENGGEIIDEEIAARLGGKSKKYD
ASYIRYIRKINTSPISLDKQVGKENDSFFGDFVKDESIISPVEFADKEEL
ITKINYYVEKLLSEAEADLIKRYHGIGYDAKGNPVRSATLDEISKDFRGE
GKKISKERVRQIITKIYKKLRGYPEVVELFENFIKFKNED
>MS53_0301 vacB, VACB-like ribonuclease II
MMNIDKIKLINYIKARKNVSFIELANYLKINRKDNKEFSAYLVSLIKRNK
IFKTFDSNYYVPELLRKQSGIIKVASKKQFAFLEFENEAQEKESVFVKFQ
DLNSALNNDEVIASIYKDHNEKNPTRQLLAVVDEIVQRNNQKIIGFIKKD
KNTIFFAPADGCFDKVKFELLNLSSKVKINDCVLCEIKKYDKNLVSLEIK
KVITNTSDPNVFVKAYLESTNIDLEFSAETLAESKLIPQEVDLNIKEKFQ
RKNLTSELIVTIDGESTKDFDDAINVKKLENGNFLLSVHIADVAHYVKEK
TNLDSEALKRGTSIYIANGVIPMLPSELSNGICSINPNVDRFALSCDIEI
DQHGNNVNYKIYKSVINSKFRLTYKQVQAFFDKDNNFLSLEQKKSSYVKE
LETMLTNAYELSLILHKYKEAQGYVDFEIPEPKIFLNEDGTVKEIKIHKR
VYSEILIEDFMVRTNEVVAKYLSDLKMPVLYRIHENPSEEKLQSLKTNLT
ALGINIKNINSITSSANDFSKFVYQTRNQRNDYFINLLFLRTMQKAIYSL
NNIGHFGLASEFYCHFTSPIRRYPDLLVHRILTMHLEGKSSQEILNHFDS
KLDSYAQLNSNSEQKAIEIERKVNDLKFAEFLKFQTGQKFKAQIVSVLNF
GIFVEFEFGGSGLIHKSNFFDGSYEANEMLTVFASETKSYKIGEYVDVVI
IATDLLEGKIDCVLESQYDAYKLNLTRKHEKPRNSK