Gene list
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COG category: Transcription
Organism: Treponema denticola ATCC 35405, ATCC 35405
Number of genes found: 130
Show UniProt / TrEMBL protein name | View in Fasta format (DNA) | View in Fasta format (Protein) | ||||
Treponema denticola ATCC 35405, ATCC 35405 | ||||||||
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Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
NA | TDE2115 | HAMP domain protein | chromosome | CDS | 2140270 | 4581 | - | 0.358 |
NA | TDE0655 | response regulator | chromosome | CDS | 691061 | 699 | + | 0.353362 |
NA | TDE2079 | sigma-54 dependent transcriptional regulator, putative | chromosome | CDS | 2107608 | 1518 | - | 0.399209 |
NA | TDE0820 | transcriptional regulator, TetR family | chromosome | CDS | 843804 | 660 | - | 0.404545 |
NA | TDE2309 | sigma-54 dependent transcriptional regulator, putative | chromosome | CDS | 2346648 | 1542 | - | 0.457847 |
NA | TDE2474 | acetyltransferase, GNAT family | chromosome | CDS | 2496692 | 495 | - | 0.391919 |
NA | TDE0400 | transcriptional regulator, LysR family | chromosome | CDS | 450973 | 921 | - | 0.37025 |
NA | TDE1162 | ParB-like nuclease domain protein | chromosome | CDS | 1196146 | 1629 | - | 0.332719 |
NA | TDE1784 | transcriptional activator, AraC family | chromosome | CDS | 1823671 | 843 | - | 0.405694 |
NA | TDE2509 | transcriptional regulator, AraC family | chromosome | CDS | 2533328 | 885 | + | 0.263277 |
NA | TDE0895 | transcriptional regulator, AraC family | chromosome | CDS | 911317 | 948 | - | 0.380802 |
NA | TDE1858 | transcriptional regulator, PadR family | chromosome | CDS | 1884772 | 315 | + | 0.412698 |
NA | TDE2684 | hypothetical protein | chromosome | CDS | 2724270 | 669 | - | 0.403587 |
NA | TDE0703 | transcriptional regulator, AbrB family | chromosome | CDS | 738056 | 225 | - | 0.395556 |
NA | TDE2005 | conserved hypothetical protein | chromosome | CDS | 2023916 | 555 | + | 0.389189 |
NA | TDE0676 | conserved hypothetical protein | chromosome | CDS | 715000 | 420 | + | 0.395238 |
NA | TDE0808 | acetyltransferase, GNAT family | chromosome | CDS | 829270 | 471 | - | 0.33758 |
NA | TDE0006 | Snf2 family protein | chromosome | CDS | 6200 | 3585 | - | 0.407252 |
NA | TDE2445 | DNA-binding protein | chromosome | CDS | 2474422 | 306 | + | 0.297386 |
NA | TDE2592 | DbpA RNA binding domain protein | chromosome | CDS | 2627166 | 627 | + | 0.374801 |
NA | TDE2778 | PspC domain protein | chromosome | CDS | 2829461 | 234 | - | 0.384615 |
NA | TDE0348 | transcriptional regulator, TetR family | chromosome | CDS | 390597 | 597 | + | 0.346734 |
NA | TDE0168 | transcriptional regulator, GntR family | chromosome | CDS | 196757 | 402 | - | 0.400498 |
NA | TDE1371 | RNB-like family protein | chromosome | CDS | 1413388 | 1872 | - | 0.40812 |
NA | TDE0556 | hypothetical protein | chromosome | CDS | 591628 | 555 | - | 0.4 |
NA | TDE2581 | hypothetical protein | chromosome | CDS | 2610922 | 771 | + | 0.246433 |
NA | TDE0222 | acetyltransferase, GNAT family | chromosome | CDS | 254786 | 525 | - | 0.28 |
NA | TDE1953 | transcriptional regulator, TetR family | chromosome | CDS | 1969120 | 642 | - | 0.394081 |
NA | TDE1990 | ATP-dependent helicase, DinG family | chromosome | CDS | 2006457 | 2130 | - | 0.399531 |
NA | TDE0259 | transcriptional regulator, MarR family | chromosome | CDS | 293397 | 453 | + | 0.377483 |
NA | TDE1169 | phage DNA-binding protein, excisionase family | chromosome | CDS | 1199569 | 246 | - | 0.418699 |
NA | TDE0630 | sigma factor regulatory protein, putative | chromosome | CDS | 663980 | 1452 | + | 0.360882 |
NA | TDE2501 | response regulator | chromosome | CDS | 2524913 | 975 | + | 0.36 |
NA | TDE1101 | acetyltransferase, GNAT family | chromosome | CDS | 1134753 | 480 | - | 0.297917 |
NA | TDE0056 | DNA-directed RNA polymerase, omega subunit, putative | chromosome | CDS | 65846 | 207 | + | 0.400966 |
NA | TDE0989 | hypothetical protein | chromosome | CDS | 1017272 | 237 | + | 0.350211 |
NA | TDE0079 | DNA-binding protein | chromosome | CDS | 90185 | 576 | - | 0.354167 |
NA | TDE1330 | conserved hypothetical protein TIGR00244 | chromosome | CDS | 1365519 | 456 | + | 0.383772 |
NA | TDE1900 | conserved domain protein | chromosome | CDS | 1921264 | 255 | + | 0.364706 |
NA | TDE0149 | DNA-binding response regulator | chromosome | CDS | 169961 | 606 | + | 0.334983 |
NA | TDE2367 | transcriptional regulator, putative | chromosome | CDS | 2401220 | 645 | + | 0.324031 |
NA | TDE0091 | RNA polymerase sigma-24 factor, putative | chromosome | CDS | 109280 | 543 | - | 0.383057 |
NA | TDE0876 | conserved hypothetical protein | chromosome | CDS | 898429 | 186 | - | 0.268817 |
NA | TDE0090 | hypothetical protein | chromosome | CDS | 108634 | 663 | - | 0.348416 |
NA | TDE1606 | transcriptional regulator, TetR family | chromosome | CDS | 1656271 | 678 | - | 0.371681 |
NA | TDE1579 | fibronectin/fibrinogen-binding protein, internal deletion | chromosome | CDS | 1626164 | 1416 | - | 0.35452 |
NA | TDE0878 | conserved hypothetical protein | chromosome | CDS | 899792 | 198 | + | 0.318182 |
NA | TDE0127 | DNA-binding protein | chromosome | CDS | 145890 | 315 | + | 0.326984 |
NA | TDE1382 | transcriptional regulator, ArsR family | chromosome | CDS | 1422140 | 354 | + | 0.432203 |
NA | TDE2187 | ParB-like nuclease domain protein | chromosome | CDS | 2221237 | 402 | - | 0.39801 |
NA | TDE1115 | DNA-binding protein, putative | chromosome | CDS | 1149128 | 309 | - | 0.391586 |
NA | TDE1170 | DNA-binding protein | chromosome | CDS | 1199940 | 363 | + | 0.333333 |
NA | TDE1670 | transcriptional regulator, MarR family | chromosome | CDS | 1724003 | 549 | - | 0.291439 |
NA | TDE0440 | DNA-binding protein | chromosome | CDS | 496091 | 276 | + | 0.347826 |
NA | TDE1495 | hypothetical protein | chromosome | CDS | 1539686 | 621 | - | 0.293076 |
NA | TDE0606 | ParB family protein | chromosome | CDS | 643329 | 894 | - | 0.395973 |
NA | TDE0191 | acetyltransferase, GNAT family | chromosome | CDS | 227468 | 429 | - | 0.358974 |
NA | TDE0133 | transcriptional regulator, GntR family | chromosome | CDS | 152513 | 750 | + | 0.376 |
NA | TDE0713 | transcription antitermination protein, NusG family | chromosome | CDS | 747249 | 528 | + | 0.316288 |
NA | TDE0660 | transcriptional regulator, putative | chromosome | CDS | 696369 | 906 | - | 0.40287 |
NA | TDE2659 | GAF domain/HD domain protein | chromosome | CDS | 2695990 | 1254 | + | 0.395534 |
NA | TDE0496 | DNA-binding protein, putative | chromosome | CDS | 551061 | 219 | - | 0.456621 |
NA | TDE0476 | conserved hypothetical protein | chromosome | CDS | 532288 | 717 | - | 0.44212 |
NA | TDE0339 | transcriptional regulator, TetR family | chromosome | CDS | 378011 | 618 | + | 0.444984 |
NA | TDE0675 | conserved hypothetical protein | chromosome | CDS | 714134 | 858 | + | 0.40676 |
NA | TDE1222 | iron-dependent transcriptional regulator | chromosome | CDS | 1256131 | 669 | - | 0.300448 |
NA | TDE1601 | transcriptional regulator, TetR family | chromosome | CDS | 1652479 | 648 | - | 0.353395 |
NA | TDE2721 | helicase domain protein | chromosome | CDS | 2777923 | 1773 | - | 0.455161 |
NA | TDE2324 | DNA-binding response regulator | chromosome | CDS | 2359328 | 654 | + | 0.376147 |
NA | TDE1746 | conserved hypothetical protein | chromosome | CDS | 1799564 | 1242 | - | 0.39694 |
NA | TDE0037 | transcriptional regulator, AbrB family | chromosome | CDS | 42641 | 249 | - | 0.345382 |
NA | TDE2420 | DNA-directed RNA polymerase, beta' subunit, putative | chromosome | CDS | 2445050 | 4275 | - | 0.448187 |
NA | TDE0033 | DNA-binding response regulator | chromosome | CDS | 40067 | 720 | - | 0.348611 |
NA | TDE1486 | conserved hypothetical protein | chromosome | CDS | 1530439 | 315 | + | 0.396825 |
NA | TDE2703 | conserved hypothetical protein | chromosome | CDS | 2747695 | 786 | - | 0.366412 |
NA | TDE2290 | transcriptional regulator, putative | chromosome | CDS | 2327617 | 627 | + | 0.422648 |
NA | TDE1789 | hypothetical protein | chromosome | CDS | 1827428 | 276 | - | 0.275362 |
NA | TDE0937 | RNA polymerase sigma-70 factor family protein | chromosome | CDS | 960091 | 861 | + | 0.379791 |
NA | TDE1664 | conserved domain protein | chromosome | CDS | 1718002 | 1041 | + | 0.402498 |
NA | TDE2487 | acetyltransferase, GNAT family | chromosome | CDS | 2509947 | 507 | + | 0.360947 |
NA | TDE0246 | transcriptional regulator, TetR family | chromosome | CDS | 281186 | 570 | - | 0.364912 |
NA | TDE2404 | RNA polymerase sigma-54 factor, putative | chromosome | CDS | 2429403 | 1392 | - | 0.397988 |
NA | TDE1100 | acetyltransferase, GNAT family | chromosome | CDS | 1134358 | 405 | - | 0.276543 |
NA | TDE0082 | transcriptional regulator, MerR family | chromosome | CDS | 94024 | 318 | - | 0.377358 |
NA | TDE0549 | TfoX N-terminal domain family protein | chromosome | CDS | 587087 | 321 | - | 0.370717 |
NA | TDE1107 | N utilization substance protein A, putative | chromosome | CDS | 1140980 | 1488 | - | 0.395833 |
NA | TDE2109 | ATP-dependent RNA helicase, DEAD/DEAH box family | chromosome | CDS | 2133665 | 1713 | - | 0.446001 |
NA | TDE1305 | DNA-binding protein | chromosome | CDS | 1340240 | 219 | + | 0.39726 |
NA | TDE1123 | sigma factor regulatory protein, putative | chromosome | CDS | 1153827 | 1686 | - | 0.365362 |
NA | TDE0393 | transcriptional regulator, TetR family | chromosome | CDS | 443272 | 648 | - | 0.302469 |
NA | TDE1812 | hypothetical protein | chromosome | CDS | 1847670 | 276 | - | 0.268116 |
NA | TDE1114 | transcriptional regulator, TetR family | chromosome | CDS | 1148324 | 672 | - | 0.452381 |
NA | TDE1035 | transcriptional regulator, PadR family | chromosome | CDS | 1063594 | 327 | + | 0.406728 |
NA | TDE2277 | transcriptional regulator, Sir2 family | chromosome | CDS | 2312820 | 756 | + | 0.412698 |
NA | TDE1719 | transcriptional regulator, MarR family | chromosome | CDS | 1774169 | 438 | + | 0.429224 |
NA | TDE0542 | acetyltransferase, GNAT family | chromosome | CDS | 582720 | 483 | + | 0.372671 |
NA | TDE1346 | RNA polymerase sigma-70 factor family protein | chromosome | CDS | 1385359 | 1860 | + | 0.394624 |
NA | TDE0608 | DNA-binding protein, putative | chromosome | CDS | 645084 | 174 | - | 0.373563 |
NA | TDE0114 | iron-dependent transcriptional regulator | chromosome | CDS | 133671 | 420 | - | 0.37381 |
NA | TDE1097 | acetyltransferase, GNAT family | chromosome | CDS | 1132002 | 855 | - | 0.291228 |
NA | TDE0814 | transcriptional regulator, putative | chromosome | CDS | 835799 | 171 | - | 0.362573 |
NA | TDE1099 | acetyltransferase, GNAT family | chromosome | CDS | 1133826 | 516 | - | 0.271318 |
NA | TDE0801 | conserved hypothetical protein | chromosome | CDS | 824015 | 435 | - | 0.335632 |
NA | TDE0332 | transcriptional regulator, TetR family | chromosome | CDS | 371080 | 627 | + | 0.333333 |
NA | TDE0874 | transcriptional regulator, putative | chromosome | CDS | 897079 | 516 | + | 0.459302 |
NA | TDE1497 | conserved hypothetical protein | chromosome | CDS | 1543348 | 417 | + | 0.352518 |
NA | TDE2413 | hypothetical protein | chromosome | CDS | 2440413 | 666 | - | 0.342342 |
NA | TDE2627 | transcriptional regulator, TetR family | chromosome | CDS | 2668622 | 609 | - | 0.449918 |
NA | TDE1365 | transcriptional regulator, TetR family | chromosome | CDS | 1407895 | 579 | + | 0.295337 |
NA | TDE2412 | acetyltransferase, GNAT family | chromosome | CDS | 2439885 | 468 | - | 0.314103 |
NA | TDE0441 | hypothetical protein | chromosome | CDS | 496466 | 270 | - | 0.248148 |
NA | TDE0891 | transcriptional regulator, putative | chromosome | CDS | 907732 | 921 | + | 0.365907 |
NA | TDE2486 | hypothetical protein | chromosome | CDS | 2509377 | 555 | + | 0.259459 |
NA | TDE0070 | RNA polymerase sigma-70 factor, region 2 family | chromosome | CDS | 77853 | 828 | + | 0.349034 |
NA | TDE2650 | transcriptional regulator, putative | chromosome | CDS | 2688756 | 366 | - | 0.352459 |
NA | TDE1690 | hypothetical protein | chromosome | CDS | 1746673 | 618 | - | 0.357605 |
NA | TDE0817 | histidine kinase-related ATPase, putative | chromosome | CDS | 838940 | 1080 | + | 0.330556 |
NA | TDE2320 | RNA polymerase sigma-24 factor, putative | chromosome | CDS | 2356400 | 642 | - | 0.380062 |
NA | TDE1647 | DNA-binding protein | chromosome | CDS | 1696245 | 348 | - | 0.336207 |
NA | TDE0344 | transcriptional regulator, AbrB family | chromosome | CDS | 385457 | 222 | - | 0.387387 |
fliA | TDE2683 | RNA polymerase sigma-27 factor | chromosome | CDS | 2723457 | 789 | - | 0.373891 |
hypB | TDE2165 | hydrogenase accessory protein HypB | chromosome | CDS | 2197143 | 663 | - | 0.399698 |
mfd | TDE1287 | transcription-repair coupling factor | chromosome | CDS | 1322878 | 3468 | + | 0.400519 |
nusB | TDE1657 | N utilization substance protein B | chromosome | CDS | 1707320 | 411 | - | 0.379562 |
nusG | TDE2426 | transcription antitermination protein NusG | chromosome | CDS | 2455332 | 558 | - | 0.401434 |
recG | TDE2579 | ATP-dependent DNA helicase RecG | chromosome | CDS | 2603378 | 2037 | - | 0.459499 |
rho | TDE1503 | transcription termination factor Rho | chromosome | CDS | 1551807 | 1647 | + | 0.403157 |
rnc | TDE1027 | ribonuclease III | chromosome | CDS | 1057702 | 741 | + | 0.421053 |
rpoA | TDE0791 | DNA-directed RNA polymerase, alpha subunit | chromosome | CDS | 817482 | 1056 | + | 0.392992 |
rpoB | TDE2421 | DNA-directed RNA polymerase, beta subunit | chromosome | CDS | 2449349 | 3504 | - | 0.432934 |