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Gene list

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COG category: Transcription
Organism: Lactobacillus johnsonii NCC 533, NCC 533

Number of genes found: 146

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Lactobacillus johnsonii NCC 533, NCC 533
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA LJ1622 transcription elongation factor GreARecName: Full=Transcription elongation factor GreA; AltName: Full=Transcript cleavage factor GreA; chromosome CDS1498508 483 - 0.337474
NA LJ1481 heat-inducible transcription repressor hrcARecName: Full=Heat-inducible transcription repressor HrcA; chromosome CDS1349662 1059 - 0.353163
NA LJ0031 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS39672 867 + 0.275663
NA LJ0249 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS280412 504 + 0.349206
NA LJ1644 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1518318 435 - 0.303448
NA LJ0637 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1727546 807 - 0.319703
NA LJ0449 two-component system response regulatorSubName: Full=Two-component system response regulator; chromosome CDS491428 768 + 0.24349
NA LJ0075 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS98433 927 + 0.330097
NA LJ0180 transcription elongation factor GreARecName: Full=Transcription elongation factor GreA; AltName: Full=Transcript cleavage factor GreA; chromosome CDS213365 462 + 0.359307
NA LJ0557 chromosome partitioning protein ParBSubName: Full=Chromosome partitioning protein ParB; chromosome CDS1825190 882 - 0.343537
NA LJ1508 LexA repressorRecName: Full=LexA repressor; EC=3.4.21.88; chromosome CDS1380198 624 + 0.375
NA LJ1729 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1614627 807 + 0.282528
NA LJ0612 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1764285 819 - 0.356532
NA LJ0116 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS138729 717 + 0.340307
NA LJ1575 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1445622 438 - 0.326484
NA LJ0294b Lj965 prophage cro-repressorSubName: Full=Lj965 prophage cro-repressor; chromosome CDS332731 204 + 0.348039
NA LJ0105 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS125688 660 + 0.325758
NA LJ1236 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1164095 453 - 0.337748
NA LJ0277 transcription-repair coupling factorRecName: Full=Transcription-repair-coupling factor; Short=TRCF; EC=3.6.4.-; chromosome CDS310370 3498 + 0.359348
NA LJ0230 arsenical resistance operon repressorSubName: Full=Arsenical resistance operon repressor; chromosome CDS265991 300 + 0.326667
NA LJ0773 lactacin F two-component system response regulator fragmentSubName: Full=Lactacin F two-component system response regulator; chromosome CDS670446 408 + 0.308824
NA LJ0451 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS493315 819 + 0.272283
NA LJ0251 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS282158 450 - 0.364444
NA LJ1114 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1020019 642 + 0.336449
NA LJ0542 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1839300 849 - 0.28033
NA LJ0662 protease synthase and sporulation negative regulatory protein PAI 1SubName: Full=Protease synthase and sporulation negative regulatory protein PAI 1; chromosome CDS1701994 525 - 0.325714
NA LJ0766 lactacin F two-component system response regulatorSubName: Full=Lactacin F two-component system response regulator; chromosome CDS664315 798 + 0.309524
NA LJ1394 GTP pyrophosphokinaseSubName: Full=GTP pyrophosphokinase; chromosome CDS1264552 2250 - 0.364444
NA LJ1521 ribonuclease IIIRecName: Full=Ribonuclease 3; EC=3.1.26.3; AltName: Full=Ribonuclease III; Short=RNase III; chromosome CDS1393245 681 - 0.348018
NA LJ1226 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1157416 498 - 0.323293
NA LJ1831 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1950987 486 + 0.3107
NA LJ1411 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1286234 390 + 0.338462
NA LJ0980b cold shock proteinSubName: Full=Cold shock protein; chromosome CDS883433 210 + 0.319048
NA LJ1748 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1637220 522 - 0.321839
NA LJ1685 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1561353 1500 - 0.29
NA LJ0666 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1698755 564 - 0.335106
NA LJ0462 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS504280 249 + 0.325301
NA LJ0663 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1701554 441 - 0.335601
NA LJ1453 Lj928 prophage protein with HTH domainSubName: Full=Lj928 prophage protein with HTH domain; chromosome CDS1323055 216 - 0.310185
NA LJ1755 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1642760 801 + 0.282147
NA LJ1220 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1153473 822 - 0.306569
NA LJ1317 RNA polymerase sigma factor RpoDRecName: Full=RNA polymerase sigma factor SigA; chromosome CDS1242786 1119 - 0.360143
NA LJ0491 catabolite control protein ASubName: Full=Catabolite control protein A; chromosome CDS545423 996 + 0.345382
NA LJ1631 two-component regulatory system response regulatorSubName: Full=Two-component regulatory system response regulator; chromosome CDS1508151 729 - 0.344307
NA LJ0296 Lj965 prophage protein with HTH domainSubName: Full=Lj965 prophage protein with HTH domain; chromosome CDS333733 279 + 0.329749
NA LJ0376 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS407917 327 - 0.321101
NA LJ1828 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1946864 735 - 0.331973
NA LJ1262 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1187831 843 - 0.310795
NA LJ1132 two-component system response regulatorSubName: Full=Two-component system response regulator; chromosome CDS1051015 696 + 0.340517
NA LJ1551 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1424715 402 - 0.320896
NA LJ0223 DNA-directed RNA polymerase delta chainRecName: Full=Probable DNA-directed RNA polymerase subunit delta; AltName: Full=RNAP delta factor; chromosome CDS257288 543 + 0.390424
NA LJ0185 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS218045 699 + 0.32618
NA LJ1172 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1094310 954 + 0.322851
NA LJ0065 two-component regulatory system response regulatorSubName: Full=Two-component regulatory system response regulator; chromosome CDS87816 708 + 0.367232
NA LJ1567 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1437229 393 - 0.279898
NA LJ0563 two-component system response regulatorSubName: Full=Two-component system response regulator; chromosome CDS1818381 687 - 0.343523
NA LJ1156 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1076475 438 + 0.317352
NA LJ0294 Lj965 prophage repressorSubName: Full=Lj965 prophage repressor; chromosome CDS332205 354 - 0.355932
NA LJ0856 lactose operon repressorSubName: Full=Lactose operon repressor; chromosome CDS754076 1011 + 0.311573
NA LJ1466 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1330838 849 - 0.342756
NA LJ1662 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1536423 714 + 0.305322
NA LJ1302 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1229666 369 - 0.355014
NA LJ1648 hypothetical proteinRecName: Full=Transcriptional repressor NrdR; chromosome CDS1523398 465 - 0.341935
NA LJ1569 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1438105 729 - 0.359396
NA LJ0473 probable RNA helicaseSubName: Full=Probable RNA helicase; chromosome CDS517883 1386 + 0.362193
NA LJ0458 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS500064 459 + 0.305011
NA LJ0013 fructokinaseSubName: Full=Fructokinase; chromosome CDS15069 885 + 0.379661
NA LJ0570 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1809292 759 - 0.382082
NA LJ1181 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1105186 423 - 0.295508
NA LJ0744 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS639235 981 + 0.336391
NA LJ1457 Lj928 prophage repressor proteinSubName: Full=Lj928 prophage repressor protein; chromosome CDS1325165 438 + 0.349315
NA LJ0242 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS274790 534 - 0.284644
NA LJ0788 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS683395 573 + 0.34904
NA LJ0735 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS627951 888 + 0.338964
NA LJ0703 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS593283 429 + 0.342657
NA LJ0576 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1799383 279 - 0.329749
NA LJ0517 sucrose operon repressorSubName: Full=Sucrose operon repressor; chromosome CDS1863256 987 + 0.350557
NA LJ1265 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1191726 1020 - 0.311765
NA LJ0189 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS222302 726 - 0.348485
NA LJ0708 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS597362 834 + 0.321343
NA LJ1796 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1913791 864 + 0.314815
NA LJ0648 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1714704 807 - 0.348203
NA LJ0270 probable RNA helicaseSubName: Full=Probable RNA helicase; chromosome CDS303542 1455 + 0.358763
NA LJ1260 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1184615 957 + 0.331243
NA LJ1149 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1067865 303 - 0.310231
NA LJ1085 hypothetical proteinRecName: Full=Segregation and condensation protein B; chromosome CDS988898 591 + 0.357022
NA LJ0734 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS626665 1146 - 0.310646
NA LJ0879 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS784932 570 + 0.345614
NA LJ1845 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1975660 414 - 0.333333
NA LJ1817 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1934639 861 - 0.327526
NA LJ0880 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS785688 570 + 0.268421
NA LJ0555 probable chromosome partitioning protein ParBSubName: Full=Probable chromosome partitioning protein ParB; chromosome CDS1826844 882 - 0.351474
NA LJ0240 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS273128 1026 - 0.310916
NA LJ0027 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS32837 810 - 0.304938
NA LJ1659 two-component system response regulatorSubName: Full=Two-component system response regulator; chromosome CDS1533663 675 + 0.314074
NA LJ1202 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1127899 2817 - 0.347178
NA LJ0403 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS451032 219 + 0.342466
NA LJ0811 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS704851 1230 + 0.337398
NA LJ1626 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1503982 357 - 0.361345
NA LJ0661 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1702520 459 - 0.32244
NA LJ0247 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS279547 450 + 0.377778
NA LJ1178 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1102048 882 + 0.328798
NA LJ0759 trehalose operon repressorSubName: Full=Trehalose operon repressor; chromosome CDS656288 903 - 0.305648
NA LJ0332 DNA-directed RNA polymerase beta chainRecName: Full=DNA-directed RNA polymerase subunit beta; Short=RNAP subunit beta; EC=2.7.7.6; AltName: Full=RNA polymerase subunit beta; AltName: Full=Transcriptase subunit beta; chromosome CDS370819 3630 + 0.388705
NA LJ1542 DNA-directed RNA polymerase omega subunitRecName: Full=DNA-directed RNA polymerase subunit omega; Short=RNAP omega subunit; EC=2.7.7.6; AltName: Full=RNA polymerase omega subunit; AltName: Full=Transcriptase subunit omega; chromosome CDS1417511 219 - 0.383562
NA LJ0724 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS616325 411 - 0.343066
NA LJ0871 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS776127 1032 + 0.396318
NA LJ1530 ATP-dependent DNA helicase RecGSubName: Full=ATP-dependent DNA helicase RecG; chromosome CDS1403323 2040 - 0.363235
NA LJ1297 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1225918 816 - 0.258578
NA LJ1182 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1105784 1692 + 0.317376
NA LJ1021 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS920537 1005 + 0.4
NA LJ0037 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS46005 2841 + 0.345653
NA LJ0172 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS202788 1110 + 0.366667
NA LJ0463 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS504477 639 + 0.276995
NA LJ0020 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS24563 801 - 0.258427
NA LJ0210 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS241388 945 + 0.354497
NA LJ0126 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS147200 726 - 0.312672
NA LJ0802 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS695570 786 + 0.321883
NA LJ0547 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1833390 624 - 0.338141
NA LJ0093 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS113946 714 - 0.326331
NA LJ1739 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1628950 702 - 0.358974
NA LJ0918 two-component system response regulatorSubName: Full=Two-component system response regulator; chromosome CDS819615 711 + 0.368495
NA LJ0333 DNA-directed RNA polymerase beta' chainRecName: Full=DNA-directed RNA polymerase subunit beta; Short=RNAP subunit beta; EC=2.7.7.6; AltName: Full=RNA polymerase subunit beta; AltName: Full=Transcriptase subunit beta; chromosome CDS374466 3675 + 0.393469
NA LJ0877 ribonuclease RRecName: Full=Ribonuclease R; Short=RNase R; EC=3.1.13.1; chromosome CDS782107 2343 + 0.34443
NA LJ0582 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1791898 1125 - 0.384
NA LJ1127 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1032995 435 - 0.287356
NA LJ0528 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1852029 852 - 0.328638
NA LJ1048 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS946936 1173 + 0.344416
NA LJ0623 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1744077 669 - 0.321375
NA LJ0050 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS70490 927 + 0.320388
NA LJ0800 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS694185 729 + 0.33059
NA LJ0361 DNA-directed RNA polymerase alpha chainRecName: Full=DNA-directed RNA polymerase subunit alpha; Short=RNAP subunit alpha; EC=2.7.7.6; AltName: Full=RNA polymerase subunit alpha; AltName: Full=Transcriptase subunit alpha; chromosome CDS394595 939 + 0.387646
NA LJ0539 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1842045 522 - 0.337165
NA LJ1587 two-component system response regulatorSubName: Full=Two-component system response regulator; chromosome CDS1462333 666 - 0.369369
NA LJ0749 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS645841 372 + 0.357527
NA LJ0195 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS227182 861 - 0.367015
NA LJ0238 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS271401 633 + 0.309637
NA LJ1118 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1023378 870 - 0.333333
NA LJ1568 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1437764 342 - 0.307018
NA LJ0144 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS169257 759 - 0.330698
NA LJ1489 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1358527 297 - 0.316498
NA LJ1835 CopAB ATPases metal-fist type repressorSubName: Full=CopAB ATPases metal-fist type repressor; chromosome CDS1953314 435 + 0.351724
NA LJ0396 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS443136 1035 + 0.337198
NA LJ0259 raffinose operon transcriptional regulatorSubName: Full=Raffinose operon transcriptional regulator; chromosome CDS288966 828 - 0.335749
NA LJ1490 N utilization substance protein A-like proteinSubName: Full=N utilization substance protein A-like protein; chromosome CDS1358834 1221 - 0.366093
NA LJ0409 transcription antitermination protein NusGRecName: Full=Transcription termination/antitermination protein NusG; chromosome CDS458242 552 + 0.360507