Gene list
Applied filters:
COG category: Transcription
Organism: Lactobacillus johnsonii NCC 533, NCC 533
Number of genes found: 146
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| Show UniProt / TrEMBL protein name | |
View in Fasta format (DNA) | |
View in Fasta format (Protein) | |
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| Lactobacillus johnsonii NCC 533, NCC 533 | ||||||||
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| Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
| NA | LJ0332 | DNA-directed RNA polymerase beta chain | chromosome | CDS | 370819 | 3630 | + | 0.388705 |
| NA | LJ0361 | DNA-directed RNA polymerase alpha chain | chromosome | CDS | 394595 | 939 | + | 0.387646 |
| NA | LJ1551 | hypothetical protein | chromosome | CDS | 1424715 | 402 | - | 0.320896 |
| NA | LJ0980b | cold shock protein | chromosome | CDS | 883433 | 210 | + | 0.319048 |
| NA | LJ1489 | hypothetical protein | chromosome | CDS | 1358527 | 297 | - | 0.316498 |
| NA | LJ0708 | hypothetical protein | chromosome | CDS | 597362 | 834 | + | 0.321343 |
| NA | LJ0663 | hypothetical protein | chromosome | CDS | 1701554 | 441 | - | 0.335601 |
| NA | LJ1236 | hypothetical protein | chromosome | CDS | 1164095 | 453 | - | 0.337748 |
| NA | LJ1114 | hypothetical protein | chromosome | CDS | 1020019 | 642 | + | 0.336449 |
| NA | LJ1626 | hypothetical protein | chromosome | CDS | 1503982 | 357 | - | 0.361345 |
| NA | LJ0116 | hypothetical protein | chromosome | CDS | 138729 | 717 | + | 0.340307 |
| NA | LJ0075 | hypothetical protein | chromosome | CDS | 98433 | 927 | + | 0.330097 |
| NA | LJ1172 | hypothetical protein | chromosome | CDS | 1094310 | 954 | + | 0.322851 |
| NA | LJ0050 | hypothetical protein | chromosome | CDS | 70490 | 927 | + | 0.320388 |
| NA | LJ1297 | hypothetical protein | chromosome | CDS | 1225918 | 816 | - | 0.258578 |
| NA | LJ0195 | hypothetical protein | chromosome | CDS | 227182 | 861 | - | 0.367015 |
| NA | LJ1587 | two-component system response regulator | chromosome | CDS | 1462333 | 666 | - | 0.369369 |
| NA | LJ0189 | hypothetical protein | chromosome | CDS | 222302 | 726 | - | 0.348485 |
| NA | LJ0473 | probable RNA helicase | chromosome | CDS | 517883 | 1386 | + | 0.362193 |
| NA | LJ0877 | ribonuclease R | chromosome | CDS | 782107 | 2343 | + | 0.34443 |
| NA | LJ0802 | hypothetical protein | chromosome | CDS | 695570 | 786 | + | 0.321883 |
| NA | LJ1481 | heat-inducible transcription repressor hrcA | chromosome | CDS | 1349662 | 1059 | - | 0.353163 |
| NA | LJ1220 | hypothetical protein | chromosome | CDS | 1153473 | 822 | - | 0.306569 |
| NA | LJ1835 | CopAB ATPases metal-fist type repressor | chromosome | CDS | 1953314 | 435 | + | 0.351724 |
| NA | LJ0662 | protease synthase and sporulation negative regulatory protein PAI 1 | chromosome | CDS | 1701994 | 525 | - | 0.325714 |
| NA | LJ0223 | DNA-directed RNA polymerase delta chain | chromosome | CDS | 257288 | 543 | + | 0.390424 |
| NA | LJ1569 | hypothetical protein | chromosome | CDS | 1438105 | 729 | - | 0.359396 |
| NA | LJ0547 | hypothetical protein | chromosome | CDS | 1833390 | 624 | - | 0.338141 |
| NA | LJ1048 | hypothetical protein | chromosome | CDS | 946936 | 1173 | + | 0.344416 |
| NA | LJ1739 | hypothetical protein | chromosome | CDS | 1628950 | 702 | - | 0.358974 |
| NA | LJ0542 | hypothetical protein | chromosome | CDS | 1839300 | 849 | - | 0.28033 |
| NA | LJ0612 | hypothetical protein | chromosome | CDS | 1764285 | 819 | - | 0.356532 |
| NA | LJ0172 | hypothetical protein | chromosome | CDS | 202788 | 1110 | + | 0.366667 |
| NA | LJ0744 | hypothetical protein | chromosome | CDS | 639235 | 981 | + | 0.336391 |
| NA | LJ1729 | hypothetical protein | chromosome | CDS | 1614627 | 807 | + | 0.282528 |
| NA | LJ0093 | hypothetical protein | chromosome | CDS | 113946 | 714 | - | 0.326331 |
| NA | LJ0788 | hypothetical protein | chromosome | CDS | 683395 | 573 | + | 0.34904 |
| NA | LJ0037 | hypothetical protein | chromosome | CDS | 46005 | 2841 | + | 0.345653 |
| NA | LJ1118 | hypothetical protein | chromosome | CDS | 1023378 | 870 | - | 0.333333 |
| NA | LJ1755 | hypothetical protein | chromosome | CDS | 1642760 | 801 | + | 0.282147 |
| NA | LJ0296 | Lj965 prophage protein with HTH domain | chromosome | CDS | 333733 | 279 | + | 0.329749 |
| NA | LJ1394 | GTP pyrophosphokinase | chromosome | CDS | 1264552 | 2250 | - | 0.364444 |
| NA | LJ0020 | hypothetical protein | chromosome | CDS | 24563 | 801 | - | 0.258427 |
| NA | LJ1317 | RNA polymerase sigma factor RpoD | chromosome | CDS | 1242786 | 1119 | - | 0.360143 |
| NA | LJ0703 | hypothetical protein | chromosome | CDS | 593283 | 429 | + | 0.342657 |
| NA | LJ1411 | hypothetical protein | chromosome | CDS | 1286234 | 390 | + | 0.338462 |
| NA | LJ0242 | hypothetical protein | chromosome | CDS | 274790 | 534 | - | 0.284644 |
| NA | LJ0403 | hypothetical protein | chromosome | CDS | 451032 | 219 | + | 0.342466 |
| NA | LJ0623 | hypothetical protein | chromosome | CDS | 1744077 | 669 | - | 0.321375 |
| NA | LJ1457 | Lj928 prophage repressor protein | chromosome | CDS | 1325165 | 438 | + | 0.349315 |
| NA | LJ0724 | hypothetical protein | chromosome | CDS | 616325 | 411 | - | 0.343066 |
| NA | LJ1567 | hypothetical protein | chromosome | CDS | 1437229 | 393 | - | 0.279898 |
| NA | LJ1662 | hypothetical protein | chromosome | CDS | 1536423 | 714 | + | 0.305322 |
| NA | LJ1262 | hypothetical protein | chromosome | CDS | 1187831 | 843 | - | 0.310795 |
| NA | LJ0491 | catabolite control protein A | chromosome | CDS | 545423 | 996 | + | 0.345382 |
| NA | LJ0749 | hypothetical protein | chromosome | CDS | 645841 | 372 | + | 0.357527 |
| NA | LJ0027 | hypothetical protein | chromosome | CDS | 32837 | 810 | - | 0.304938 |
| NA | LJ0759 | trehalose operon repressor | chromosome | CDS | 656288 | 903 | - | 0.305648 |
| NA | LJ0294 | Lj965 prophage repressor | chromosome | CDS | 332205 | 354 | - | 0.355932 |
| NA | LJ0734 | hypothetical protein | chromosome | CDS | 626665 | 1146 | - | 0.310646 |
| NA | LJ1644 | hypothetical protein | chromosome | CDS | 1518318 | 435 | - | 0.303448 |
| NA | LJ0539 | hypothetical protein | chromosome | CDS | 1842045 | 522 | - | 0.337165 |
| NA | LJ1817 | hypothetical protein | chromosome | CDS | 1934639 | 861 | - | 0.327526 |
| NA | LJ1659 | two-component system response regulator | chromosome | CDS | 1533663 | 675 | + | 0.314074 |
| NA | LJ1021 | hypothetical protein | chromosome | CDS | 920537 | 1005 | + | 0.4 |
| NA | LJ0528 | hypothetical protein | chromosome | CDS | 1852029 | 852 | - | 0.328638 |
| NA | LJ1542 | DNA-directed RNA polymerase omega subunit | chromosome | CDS | 1417511 | 219 | - | 0.383562 |
| NA | LJ0856 | lactose operon repressor | chromosome | CDS | 754076 | 1011 | + | 0.311573 |
| NA | LJ1202 | hypothetical protein | chromosome | CDS | 1127899 | 2817 | - | 0.347178 |
| NA | LJ0238 | hypothetical protein | chromosome | CDS | 271401 | 633 | + | 0.309637 |
| NA | LJ0180 | transcription elongation factor GreA | chromosome | CDS | 213365 | 462 | + | 0.359307 |
| NA | LJ0648 | hypothetical protein | chromosome | CDS | 1714704 | 807 | - | 0.348203 |
| NA | LJ0185 | hypothetical protein | chromosome | CDS | 218045 | 699 | + | 0.32618 |
| NA | LJ0666 | hypothetical protein | chromosome | CDS | 1698755 | 564 | - | 0.335106 |
| NA | LJ0462 | hypothetical protein | chromosome | CDS | 504280 | 249 | + | 0.325301 |
| NA | LJ0557 | chromosome partitioning protein ParB | chromosome | CDS | 1825190 | 882 | - | 0.343537 |
| NA | LJ0409 | transcription antitermination protein NusG | chromosome | CDS | 458242 | 552 | + | 0.360507 |
| NA | LJ0333 | DNA-directed RNA polymerase beta' chain | chromosome | CDS | 374466 | 3675 | + | 0.393469 |
| NA | LJ0582 | hypothetical protein | chromosome | CDS | 1791898 | 1125 | - | 0.384 |
| NA | LJ0126 | hypothetical protein | chromosome | CDS | 147200 | 726 | - | 0.312672 |
| NA | LJ1466 | hypothetical protein | chromosome | CDS | 1330838 | 849 | - | 0.342756 |
| NA | LJ0294b | Lj965 prophage cro-repressor | chromosome | CDS | 332731 | 204 | + | 0.348039 |
| NA | LJ0396 | hypothetical protein | chromosome | CDS | 443136 | 1035 | + | 0.337198 |
| NA | LJ0240 | hypothetical protein | chromosome | CDS | 273128 | 1026 | - | 0.310916 |
| NA | LJ1648 | hypothetical protein | chromosome | CDS | 1523398 | 465 | - | 0.341935 |
| NA | LJ0576 | hypothetical protein | chromosome | CDS | 1799383 | 279 | - | 0.329749 |
| NA | LJ1530 | ATP-dependent DNA helicase RecG | chromosome | CDS | 1403323 | 2040 | - | 0.363235 |
| NA | LJ0918 | two-component system response regulator | chromosome | CDS | 819615 | 711 | + | 0.368495 |
| NA | LJ1845 | hypothetical protein | chromosome | CDS | 1975660 | 414 | - | 0.333333 |
| NA | LJ1156 | hypothetical protein | chromosome | CDS | 1076475 | 438 | + | 0.317352 |
| NA | LJ0880 | hypothetical protein | chromosome | CDS | 785688 | 570 | + | 0.268421 |
| NA | LJ1149 | hypothetical protein | chromosome | CDS | 1067865 | 303 | - | 0.310231 |
| NA | LJ0376 | hypothetical protein | chromosome | CDS | 407917 | 327 | - | 0.321101 |
| NA | LJ0773 | lactacin F two-component system response regulator fragment | chromosome | CDS | 670446 | 408 | + | 0.308824 |
| NA | LJ1182 | hypothetical protein | chromosome | CDS | 1105784 | 1692 | + | 0.317376 |
| NA | LJ1260 | hypothetical protein | chromosome | CDS | 1184615 | 957 | + | 0.331243 |
| NA | LJ1575 | hypothetical protein | chromosome | CDS | 1445622 | 438 | - | 0.326484 |
| NA | LJ1568 | hypothetical protein | chromosome | CDS | 1437764 | 342 | - | 0.307018 |
| NA | LJ0270 | probable RNA helicase | chromosome | CDS | 303542 | 1455 | + | 0.358763 |
| NA | LJ0735 | hypothetical protein | chromosome | CDS | 627951 | 888 | + | 0.338964 |
| NA | LJ1302 | hypothetical protein | chromosome | CDS | 1229666 | 369 | - | 0.355014 |
| NA | LJ0570 | hypothetical protein | chromosome | CDS | 1809292 | 759 | - | 0.382082 |
| NA | LJ0210 | hypothetical protein | chromosome | CDS | 241388 | 945 | + | 0.354497 |
| NA | LJ0259 | raffinose operon transcriptional regulator | chromosome | CDS | 288966 | 828 | - | 0.335749 |
| NA | LJ0251 | hypothetical protein | chromosome | CDS | 282158 | 450 | - | 0.364444 |
| NA | LJ1831 | hypothetical protein | chromosome | CDS | 1950987 | 486 | + | 0.3107 |
| NA | LJ0463 | hypothetical protein | chromosome | CDS | 504477 | 639 | + | 0.276995 |
| NA | LJ0879 | hypothetical protein | chromosome | CDS | 784932 | 570 | + | 0.345614 |
| NA | LJ1796 | hypothetical protein | chromosome | CDS | 1913791 | 864 | + | 0.314815 |
| NA | LJ1631 | two-component regulatory system response regulator | chromosome | CDS | 1508151 | 729 | - | 0.344307 |
| NA | LJ0013 | fructokinase | chromosome | CDS | 15069 | 885 | + | 0.379661 |
| NA | LJ1265 | hypothetical protein | chromosome | CDS | 1191726 | 1020 | - | 0.311765 |
| NA | LJ0277 | transcription-repair coupling factor | chromosome | CDS | 310370 | 3498 | + | 0.359348 |
| NA | LJ0449 | two-component system response regulator | chromosome | CDS | 491428 | 768 | + | 0.24349 |
| NA | LJ1828 | hypothetical protein | chromosome | CDS | 1946864 | 735 | - | 0.331973 |
| NA | LJ0031 | hypothetical protein | chromosome | CDS | 39672 | 867 | + | 0.275663 |
| NA | LJ0247 | hypothetical protein | chromosome | CDS | 279547 | 450 | + | 0.377778 |
| NA | LJ0661 | hypothetical protein | chromosome | CDS | 1702520 | 459 | - | 0.32244 |
| NA | LJ1132 | two-component system response regulator | chromosome | CDS | 1051015 | 696 | + | 0.340517 |
| NA | LJ0249 | hypothetical protein | chromosome | CDS | 280412 | 504 | + | 0.349206 |
| NA | LJ0811 | hypothetical protein | chromosome | CDS | 704851 | 1230 | + | 0.337398 |
| NA | LJ1508 | LexA repressor | chromosome | CDS | 1380198 | 624 | + | 0.375 |
| NA | LJ0563 | two-component system response regulator | chromosome | CDS | 1818381 | 687 | - | 0.343523 |
| NA | LJ1181 | hypothetical protein | chromosome | CDS | 1105186 | 423 | - | 0.295508 |
| NA | LJ0458 | hypothetical protein | chromosome | CDS | 500064 | 459 | + | 0.305011 |
| NA | LJ1622 | transcription elongation factor GreA | chromosome | CDS | 1498508 | 483 | - | 0.337474 |
| NA | LJ1685 | hypothetical protein | chromosome | CDS | 1561353 | 1500 | - | 0.29 |
| NA | LJ0871 | hypothetical protein | chromosome | CDS | 776127 | 1032 | + | 0.396318 |
| NA | LJ1490 | N utilization substance protein A-like protein | chromosome | CDS | 1358834 | 1221 | - | 0.366093 |
| NA | LJ0105 | hypothetical protein | chromosome | CDS | 125688 | 660 | + | 0.325758 |
| NA | LJ0451 | hypothetical protein | chromosome | CDS | 493315 | 819 | + | 0.272283 |
| NA | LJ0766 | lactacin F two-component system response regulator | chromosome | CDS | 664315 | 798 | + | 0.309524 |
| NA | LJ0065 | two-component regulatory system response regulator | chromosome | CDS | 87816 | 708 | + | 0.367232 |
| NA | LJ0637 | hypothetical protein | chromosome | CDS | 1727546 | 807 | - | 0.319703 |
| NA | LJ0517 | sucrose operon repressor | chromosome | CDS | 1863256 | 987 | + | 0.350557 |
| NA | LJ1085 | hypothetical protein | chromosome | CDS | 988898 | 591 | + | 0.357022 |
| NA | LJ0555 | probable chromosome partitioning protein ParB | chromosome | CDS | 1826844 | 882 | - | 0.351474 |
| NA | LJ0800 | hypothetical protein | chromosome | CDS | 694185 | 729 | + | 0.33059 |
| NA | LJ1453 | Lj928 prophage protein with HTH domain | chromosome | CDS | 1323055 | 216 | - | 0.310185 |
| NA | LJ1748 | hypothetical protein | chromosome | CDS | 1637220 | 522 | - | 0.321839 |
| NA | LJ1226 | hypothetical protein | chromosome | CDS | 1157416 | 498 | - | 0.323293 |
| NA | LJ0230 | arsenical resistance operon repressor | chromosome | CDS | 265991 | 300 | + | 0.326667 |
| NA | LJ1521 | ribonuclease III | chromosome | CDS | 1393245 | 681 | - | 0.348018 |
| NA | LJ1127 | hypothetical protein | chromosome | CDS | 1032995 | 435 | - | 0.287356 |
| NA | LJ0144 | hypothetical protein | chromosome | CDS | 169257 | 759 | - | 0.330698 |
| NA | LJ1178 | hypothetical protein | chromosome | CDS | 1102048 | 882 | + | 0.328798 |
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