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2024-05-01 17:08:58

Gene list

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COG category: Transcription
Organism: Rickettsia typhi str. Wilmington, Wilmington

Number of genes found: 29

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Rickettsia typhi str. Wilmington, Wilmington
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA RT0102 conserved hypothetical proteinchromosome CDS137564 534 - 0.335206
NA RT0098 conserved hypothetical proteinchromosome CDS128733 570 + 0.307018
NA RT0753 rickettsial conserved hypothetical proteinchromosome CDS956836 237 - 0.261603
NA RT0739 rickettsial conserved hypothetical proteinchromosome CDS938581 459 + 0.313726
NA RT0702 rickettsial conserved hypothetical proteinchromosome CDS896263 441 - 0.287982
NA RT0484 conserved hypothetical proteinchromosome CDS617672 393 + 0.284987
cspA RT0662 cold shock protein CspAchromosome CDS838856 213 - 0.319249
czcR RT0061 transcriptional activator protein CzcRchromosome CDS79886 714 - 0.320728
greA RT0850 transcription elongation factor GreAchromosome CDS1087371 489 + 0.333333
mfd RT0586 transcription-repair coupling factor (superfamily helicase II)chromosome CDS758439 3363 - 0.290217
nusA RT0540 transcription elongation protein NusA (N utilization substance protein A)chromosome CDS691129 1512 - 0.318783
nusB RT0152 transcription termination protein NusB (N utilization substance protein B)chromosome CDS193868 522 + 0.256705
nusG RT0124 transcription antitermination protein NusG (N utilization substance protein G)chromosome CDS157349 579 + 0.284974
ompR RT0413 response regulator protein OmpRchromosome CDS525218 669 - 0.29148
parB RT0073 chromosome partitioning protein ParB (Spo0J protein)chromosome CDS95319 861 - 0.268293
recG RT0582 ATP-dependent DNA helicase RecGchromosome CDS750897 2112 - 0.309186
rhlE RT0661 probable ATP-dependent RNA helicase RhlEchromosome CDS837222 1224 - 0.329248
rho RT0513 transcription termination factor Rhochromosome CDS652567 1353 - 0.33629
rnc RT0019 ribonuclease IIIchromosome CDS21045 684 - 0.30117
rpoA RT0627 DNA-directed RNA polymerase alpha subunitchromosome CDS815371 1023 - 0.309873
rpoB RT0129 DNA-directed RNA polymerase beta subunitchromosome CDS161240 4125 + 0.327515
rpoC RT0130 DNA-directed RNA polymerase beta prime subunitchromosome CDS165666 4119 + 0.346443
rpoD RT0847 RNA polymerase sigma factor RpoDchromosome CDS1082771 1908 - 0.320231
rpoH RT0294 RNA polymerase sigma 32 subunit (heat shock sigma factor)chromosome CDS372552 882 - 0.300454
rpoZ RT0567 DNA-directed RNA polymerase omega subunitchromosome CDS734193 384 - 0.322917
spoTa RT0302 guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase SpoTachromosome CDS383652 708 + 0.274011
spoTb RT0615 guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase SpoTbchromosome CDS804351 753 + 0.282869
spoTc RT0616 guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase SpoTcchromosome CDS805109 342 - 0.245614
spoTd RT0700 guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase SpoTdchromosome CDS894348 576 - 0.310764