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2024-05-17 19:47:59

Gene list

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COG category: Transcription
Organism: Haemophilus ducreyi 35000HP, 35000HP

Number of genes found: 75

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Haemophilus ducreyi 35000HP, 35000HP
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA HD0698 possible tetR family transcriptional regulatorSubName: Full=Possible tetR family transcriptional regulator; chromosome CDS553155 627 - 0.417863
NA HD1538 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1269856 195 - 0.441026
NA HD2030 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1692997 2118 - 0.33711
NA HD1374 conserved hypothetical proteinRecName: Full=Transcriptional repressor NrdR; chromosome CDS1122165 450 + 0.375556
NA HD1533 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1268904 303 - 0.481848
NA HD0089 probable transcription regulatorSubName: Full=Probable transcription regulator; chromosome CDS72533 702 - 0.441595
NA HD0498 putative phage anti-repressor proteinSubName: Full=Putative phage anti-repressor protein; chromosome CDS385828 600 + 0.436667
NA HD1694 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1412498 336 - 0.383929
NA HD1794 conserved hypothetical proteinRecName: Full=UPF0301 protein HD_1794; chromosome CDS1502603 561 + 0.377897
NA HD1080 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS861222 453 + 0.397351
NA HD0913 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS730261 927 - 0.37109
NA HD1595 transcription regulator, GntR familySubName: Full=Transcription regulator, GntR family; chromosome CDS1315981 1302 + 0.341014
NA HD1380 putative transcriptional regulatorSubName: Full=Putative transcriptional regulator; chromosome CDS1127211 879 + 0.366325
NA HD1565 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1285233 744 + 0.407258
NA HD0479 possible DNA-binding proteinSubName: Full=Possible DNA-binding protein; chromosome CDS377702 843 - 0.371293
NA HD0912 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS729797 468 + 0.33547
NA HD1063 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS845042 456 - 0.344298
NA HD1985 possible DNA transformation proteinSubName: Full=Possible DNA transformation protein; chromosome CDS1651665 636 + 0.316038
NA HD1613 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1332901 336 + 0.339286
NA HD1096 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS874715 390 - 0.328205
NA HD1287 probable ATP-dependent helicaseSubName: Full=Probable ATP-dependent helicase; chromosome CDS1049843 1920 + 0.399479
NA HD0254 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS193041 261 - 0.375479
NA HD0317 transcription accessory protein tex homologSubName: Full=Transcription accessory protein tex-like protein; chromosome CDS250251 2319 - 0.404053
NA HD0292 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS223958 339 + 0.324484
NA HD1540 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1270186 471 + 0.358811
NA HD1863 probable DeoR-family transcription repressorSubName: Full=Probable DeoR-family transcription repressor; chromosome CDS1564660 747 + 0.361446
NA HD0523 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS398550 744 + 0.407258
NA HD1917 probable RNA polymerase sigma factorRecName: Full=RNA polymerase sigma factor; chromosome CDS1611711 585 + 0.348718
arcA HD0278 aerobic respiration control protein ArcASubName: Full=Aerobic respiration control protein ArcA; chromosome CDS213635 714 + 0.380952
argR HD0262 arginine repressorRecName: Full=Arginine repressor; chromosome CDS199095 462 - 0.376623
asnC HD1911 transcription regulatory protein, AsnCSubName: Full=Transcription regulatory protein, AsnC; chromosome CDS1608322 444 - 0.349099
cpxR HD1469 transcriptional regulatory protein CpxRSubName: Full=Transcriptional regulatory protein CpxR; chromosome CDS1204379 723 + 0.374827
cspC HD1008 cold shock-like protein CspCSubName: Full=Cold shock-like protein CspC; chromosome CDS800910 210 - 0.357143
cspD HD1366 cold shock-like protein CspDSubName: Full=Cold shock-like protein CspD; chromosome CDS1115208 207 - 0.347826
cysB HD1030 cys regulon transcriptional activatorSubName: Full=Cys regulon transcriptional activator; chromosome CDS819801 984 + 0.371951
deaD HD1590 cold-shock DEAD box protein-ARecName: Full=ATP-dependent RNA helicase DeaD; EC=3.6.4.13; AltName: Full=Cold-shock DEAD box protein A; chromosome CDS1311864 1821 + 0.403624
fadR HD1727 fatty acid metabolism regulator proteinRecName: Full=Fatty acid metabolism regulator protein; chromosome CDS1438895 747 - 0.381526
fis HD0449 DNA-binding proteinRecName: Full=DNA-binding protein Fis; chromosome CDS355260 297 + 0.377104
gcvA HD1028 glycine cleavage system transcriptional activatorSubName: Full=Glycine cleavage system transcriptional activator; chromosome CDS818228 894 + 0.355705
glpR HD1648 glycerol-3-phosphate regulon repressorSubName: Full=Glycerol-3-phosphate regulon repressor; chromosome CDS1366367 762 - 0.355643
greA HD1699 transcription elongation factorRecName: Full=Transcription elongation factor GreA; AltName: Full=Transcript cleavage factor GreA; chromosome CDS1415040 477 - 0.379455
greB HD1167 transcription elongation factorRecName: Full=Transcription elongation factor GreB; AltName: Full=Transcript cleavage factor GreB; chromosome CDS947020 489 - 0.394683
hepA HD1764 RNA polymerase associated proteinRecName: Full=RNA polymerase-associated protein RapA; EC=3.6.4.-; AltName: Full=ATP-dependent helicase HepA; chromosome CDS1473426 2922 - 0.393224
kdkA HD1101 3-deoxy-D-mannooctulosonic acid kinaseRecName: Full=3-deoxy-D-manno-octulosonic acid kinase; Short=Kdo kinase; EC=2.7.1.166; chromosome CDS878056 729 - 0.374486
lexA HD0545 probable LexA repressorRecName: Full=LexA repressor; EC=3.4.21.88; chromosome CDS414589 636 - 0.397799
lrp HD1477 leucine-responsive regulatory proteinSubName: Full=Leucine-responsive regulatory protein; chromosome CDS1213455 483 - 0.339545
metJ HD0675 met repressorRecName: Full=Met repressor; AltName: Full=Met regulon regulatory protein MetJ; chromosome CDS533928 318 - 0.393082
mfd HD0975 transcription repair coupling factorRecName: Full=Transcription-repair-coupling factor; Short=TRCF; EC=3.6.4.-; chromosome CDS768923 3483 - 0.38731
mlc HD1479 probable transcriptional repressor of carbohydrate metabolism; PTS operonSubName: Full=Probable transcriptional repressor of carbohydrate metabolism PTS operon; chromosome CDS1215283 1233 + 0.321979
narP HD0305 nitrate/nitrite response regulator proteinSubName: Full=Nitrate/nitrite response regulator protein; chromosome CDS235104 642 - 0.369159
ner HD0090 possible DNA-binding proteinSubName: Full=Possible DNA-binding protein; chromosome CDS73434 261 + 0.440613
nusA HD1462 transcription termination-antitermination factor nusA, N utilization substance protein ASubName: Full=Transcription termination-antitermination factor nusA, N utilization substance protein A; chromosome CDS1198537 1482 - 0.383266
nusB HD0435 transcription termination factorRecName: Full=N utilization substance protein B homolog; Short=Protein NusB; chromosome CDS342591 414 + 0.345411
nusG HD1885 transcription antitermination proteinRecName: Full=Transcription termination/antitermination protein NusG; chromosome CDS1583456 564 - 0.404255
oxyR HD0699 hydrogen peroxide-inducible genes activatorSubName: Full=Hydrogen peroxide-inducible genes activator; chromosome CDS553774 894 - 0.388143
purR HD1641 purine nucleotide synthesis repressorRecName: Full=HTH-type transcriptional repressor PurR; AltName: Full=Pur regulon repressor; AltName: Full=Purine nucleotide synthesis repressor; chromosome CDS1361011 1020 + 0.359804
rcpB HD1306 rough colony protein BSubName: Full=Rough colony protein B; chromosome CDS1067682 492 - 0.351626
recG HD1921 ATP-dependent DNA helicase RecGSubName: Full=ATP-dependent DNA helicase RecG; chromosome CDS1615543 2094 + 0.423591
relA HD1185 GTP pyrophosphokinaseSubName: Full=GTP pyrophosphokinase; chromosome CDS962822 2208 + 0.401721
rho HD0895 transcription termination factor RhoRecName: Full=Transcription termination factor Rho; EC=3.6.4.-; AltName: Full=ATP-dependent helicase Rho; chromosome CDS716334 1263 - 0.391132
rnb HD1264 ribonuclease IIRecName: Full=Exoribonuclease 2; EC=3.1.13.1; AltName: Full=Exoribonuclease II; Short=RNase II; Short=Ribonuclease II; chromosome CDS1026086 1980 - 0.381313
rnc HD1606 ribonuclease IIIRecName: Full=Ribonuclease 3; EC=3.1.26.3; AltName: Full=Ribonuclease III; Short=RNase III; chromosome CDS1327164 669 - 0.367713
rpoA HD1951 RNA polymerase alpha subunitRecName: Full=DNA-directed RNA polymerase subunit alpha; Short=RNAP subunit alpha; EC=2.7.7.6; AltName: Full=RNA polymerase subunit alpha; AltName: Full=Transcriptase subunit alpha; chromosome CDS1637144 990 - 0.39697
rpoB HD1877 RNA polymerase beta subunitRecName: Full=DNA-directed RNA polymerase subunit beta; Short=RNAP subunit beta; EC=2.7.7.6; AltName: Full=RNA polymerase subunit beta; AltName: Full=Transcriptase subunit beta; chromosome CDS1576480 4029 - 0.394887
rpoC HD1876 RNA polymerase beta' subunitRecName: Full=DNA-directed RNA polymerase subunit beta; Short=RNAP subunit beta; EC=2.7.7.6; AltName: Full=RNA polymerase subunit beta; AltName: Full=Transcriptase subunit beta; chromosome CDS1572052 4263 - 0.414966
rpoD HD0691 RNA polymerase sigma factorRecName: Full=RNA polymerase sigma factor RpoD; AltName: Full=Sigma-70; chromosome CDS546696 1842 + 0.400651
rpoE HD1172 RNA polymerase sigma-E factorRecName: Full=RNA polymerase sigma factor; chromosome CDS952698 579 + 0.405872
rpoH HD0086 RNA polymerase sigma-32 factorRecName: Full=RNA polymerase sigma factor RpoH; AltName: Full=RNA polymerase sigma-32 factor; chromosome CDS71207 960 + 0.376042
rpoZ HD1923 RNA polymerase omega subunitRecName: Full=DNA-directed RNA polymerase subunit omega; Short=RNAP omega subunit; EC=2.7.7.6; AltName: Full=RNA polymerase omega subunit; AltName: Full=Transcriptase subunit omega; chromosome CDS1617755 306 + 0.421569
spoT HD1924 guanosine-3',5'-bis(diphosphate)3'-pyrophosphohy drolaseSubName: Full=Guanosine-3,5-bis(Diphosphate) 3-pyrophosphohydrolase; chromosome CDS1618164 1707 + 0.399531
srmB HD0213 ATP-dependent RNA helicase proteinRecName: Full=ATP-dependent RNA helicase SrmB; EC=3.6.4.13; chromosome CDS153787 1329 + 0.410083
ttk HD0735 TetR family transcription regulatorRecName: Full=Nucleoid occlusion factor SlmA; chromosome CDS579397 609 + 0.36289
tyrR HD1229 transcriptional regulatory proteinSubName: Full=Transcriptional regulatory protein; chromosome CDS995630 1152 + 0.374132
vacB HD0695 ribonuclease r, virulence associated protein VacB homologRecName: Full=Ribonuclease R; Short=RNase R; EC=3.1.13.1; chromosome CDS550216 2358 - 0.401612
wecD HD1841 putative TDP-D-fucosamine acetyltransferaseSubName: Full=Putative TDP-D-fucosamine acetyltransferase; chromosome CDS1547415 675 - 0.407407