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2024-05-17 13:56:31

Gene list

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COG category: Transcription
Organism: Prochlorococcus marinus subsp. marinus str. CCMP1375, CCMP1375; SS120

Number of genes found: 49

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Prochlorococcus marinus subsp. marinus str. CCMP1375, CCMP1375; SS120
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA Pro1601 Uncharacterized membrane proteinSubName: Full=Uncharacterized membrane protein; chromosome CDS1458214 1101 - 0.409628
NA Pro0194 Two-component response regulatorSubName: Full=Two-component response regulator; chromosome CDS190935 729 - 0.38546
NA Pro0782 Predicted proteinSubName: Full=Uncharacterized protein; chromosome CDS707091 222 + 0.400901
NA Pro0035 Predicted proteinSubName: Full=Uncharacterized protein; chromosome CDS32863 288 + 0.368056
NA Pro1542 Two-component response regulator, CheY-like receiver and wHTH DNA-binding domainsSubName: Full=Two-component response regulator, CheY-like receiver and wHTH DNA-binding domains; chromosome CDS1409678 588 + 0.387755
NA Pro0352 Predicted Zn-ribbon and ATP-cone domain-containing transcriptional regulatorRecName: Full=Transcriptional repressor NrdR; chromosome CDS339588 474 - 0.362869
NA Pro0094 Predicted transcriptional regulatorSubName: Full=Predicted transcriptional regulator; chromosome CDS104886 741 - 0.384615
NA Pro1276 Predicted proteinSubName: Full=Uncharacterized protein; chromosome CDS1177675 552 + 0.336957
NA Pro1799 cyanobacteria-specific GntR-like HTH domain containing transcriptional regulatorSubName: Full=Cyanobacteria-specific GntR-like HTH domain containing transcriptional regulator; chromosome CDS1651060 987 + 0.394124
NA Pro1780 Two-component response regulatorSubName: Full=Two-component response regulator; chromosome CDS1633934 810 - 0.434568
NA Pro1648 Predicted nucleic-acid-binding protein implicated in transcription terminationSubName: Full=Predicted nucleic-acid-binding protein implicated in transcription termination; chromosome CDS1506320 279 + 0.408602
NA Pro0464 Predicted RNA-binding proteinSubName: Full=Predicted RNA-binding protein; chromosome CDS444591 1716 - 0.339744
NA Pro0926 Predicted HTH domain transcriptional regulatorSubName: Full=Predicted HTH domain transcriptional regulator; chromosome CDS841669 483 - 0.354037
arsR Pro1578 Transcriptional regulatorSubName: Full=Transcriptional regulator; chromosome CDS1437040 312 + 0.394231
csgD Pro0177 Transcriptional regulator, contains HTH motifSubName: Full=Transcriptional regulator, contains HTH motif; chromosome CDS177893 282 + 0.393617
dinG Pro1718 Rad3-related DNA helicaseSubName: Full=Rad3-related DNA helicase; chromosome CDS1569396 1431 - 0.396925
hepA Pro0047 Superfamily II DNA/RNA helicases, SNF2 familySubName: Full=Superfamily II DNA/RNA helicases, SNF2 family; chromosome CDS46600 3189 - 0.368768
lexA Pro1336 SOS-response transcriptional repressor LexARecName: Full=LexA repressor; EC=3.4.21.88; chromosome CDS1240339 609 - 0.423645
mfd Pro1000 Transcription-repair coupling factorRecName: Full=Transcription-repair-coupling factor; Short=TRCF; EC=3.6.4.-; chromosome CDS916759 3513 + 0.325648
nagC Pro1072 ROK family sugar kinaseSubName: Full=ROK family sugar kinase; chromosome CDS991574 420 - 0.314286
nusA Pro1647 Transcription elongation factor NusASubName: Full=Transcription elongation factor NusA; chromosome CDS1504905 1419 + 0.412967
nusB Pro0009 Transcription termination factor, NusBSubName: Full=Transcription termination factor, NusB; chromosome CDS11292 636 + 0.314465
nusG Pro0231 Transcription antiterminatorRecName: Full=Transcription termination/antitermination protein NusG; chromosome CDS227469 660 - 0.40303
ompR Pro0150 Two-component response regulatorSubName: Full=Two-component response regulator; chromosome CDS150619 768 + 0.386719
ompR Pro0156 Two-component response regulatorSubName: Full=Two-component response regulator; chromosome CDS157514 744 + 0.426075
ompR Pro1083 Two-component response regulatorSubName: Full=Two-component response regulator; chromosome CDS1006867 762 - 0.459318
psb28 Pro0771 Photosystem II reaction centre W proteinRecName: Full=Photosystem II reaction center Psb28 protein; AltName: Full=Photosystem II 13 kDa protein; AltName: Full=Photosystem II reaction center W protein; chromosome CDS699968 354 - 0.384181
rbcR Pro0170 RuBisCO operon transcriptional regulatorSubName: Full=RuBisCO operon transcriptional regulator; chromosome CDS168990 954 - 0.393082
recG Pro0828 RecG-like helicaseSubName: Full=RecG-like helicase; chromosome CDS750391 2526 + 0.35867
rnc Pro1762 dsRNA-specific ribonuclease/ribonuclease IIIRecName: Full=Ribonuclease 3; EC=3.1.26.3; AltName: Full=Ribonuclease III; Short=RNase III; chromosome CDS1617217 750 + 0.368
rpoA Pro1689 DNA-directed RNA polymerase alpha subunit/40 kD subunitRecName: Full=DNA-directed RNA polymerase subunit alpha; Short=RNAP subunit alpha; EC=2.7.7.6; AltName: Full=RNA polymerase subunit alpha; AltName: Full=Transcriptase subunit alpha; chromosome CDS1552074 939 - 0.428115
rpoB Pro1640 DNA-directed RNA polymerase beta subunit/140 kD subunitRecName: Full=DNA-directed RNA polymerase subunit beta; Short=RNAP subunit beta; EC=2.7.7.6; AltName: Full=RNA polymerase subunit beta; AltName: Full=Transcriptase subunit beta; chromosome CDS1496129 3291 - 0.39289
rpoC Pro1638 DNA-directed RNA polymerase beta' subunit/160 kD subunitRecName: Full=DNA-directed RNA polymerase subunit beta; Short=RNAP subunit beta; EC=2.7.7.6; AltName: Full=RNA polymerase subunit beta; AltName: Full=Transcriptase subunit beta; chromosome CDS1490023 4104 - 0.410575
rpoC Pro1639 DNA-directed RNA polymerase beta' subunit/160 kD subunitRecName: Full=DNA-directed RNA polymerase subunit gamma; Short=RNAP subunit gamma; EC=2.7.7.6; AltName: Full=RNA polymerase subunit gamma; AltName: Full=Transcriptase subunit gamma; chromosome CDS1494174 1905 - 0.386877
rpoD Pro1863 DNA-directed RNA polymerase sigma subunitRecName: Full=RNA polymerase sigma factor; chromosome CDS1722731 1020 + 0.408824
rpoD Pro0495 DNA-directed RNA polymerase sigma subunit (sigma70/sigma32)RecName: Full=RNA polymerase sigma factor SigA; chromosome CDS471863 1317 - 0.385725
rpoD Pro0580 DNA-directed RNA polymerase sigma subunit (sigma70/sigma32)SubName: Full=DNA-directed RNA polymerase sigma subunit (Sigma70/sigma32); chromosome CDS548286 933 - 0.403001
rpoD Pro1363 DNA-directed RNA polymerase sigma subunit (sigma70/sigma32)RecName: Full=RNA polymerase sigma factor; chromosome CDS1264686 942 - 0.39172
rpoD Pro1791 DNA-directed RNA polymerase sigma subunit (sigma70/sigma32)RecName: Full=RNA polymerase sigma factor; chromosome CDS1643541 987 - 0.379939
rsbU Pro0011 Serine phosphatase RsbUSubName: Full=Serine phosphatase RsbU; chromosome CDS13310 1410 + 0.37234
spoT Pro0217 GTP pyrophosphokinaseSubName: Full=GTP pyrophosphokinase; chromosome CDS212585 2331 - 0.394251
srmB Pro1094 Superfamily II DNA/RNA helicaseRecName: Full=ATP-dependent RNA helicase DeaD; EC=3.6.4.13; AltName: Full=Cold-shock DEAD box protein A; chromosome CDS1020284 1812 + 0.379139
umuD Pro0760 UmuD ortholog, peptidase family S24SubName: Full=UmuD ortholog, peptidase family S24; chromosome CDS691340 432 - 0.423611
vacB Pro0988 Exoribonuclease RSubName: Full=Exoribonuclease R; chromosome CDS905204 2307 + 0.304725
vacB Pro0969 Exoribonuclease R/ribonuclease IISubName: Full=Exoribonuclease R/ribonuclease II; chromosome CDS890081 1299 + 0.279446
wecD Pro1802 AcetyltransferaseSubName: Full=Acetyltransferase; chromosome CDS1655799 462 + 0.372294
wecD Pro0564 Acetyltransferase, GNAT familyRecName: Full=Uncharacterized N-acetyltransferase ycf52-like; EC=2.3.1.-; chromosome CDS535799 543 + 0.38674
wecD Pro0877 AcetyltransferaseSubName: Full=Acetyltransferase; chromosome CDS798633 891 + 0.344557
wecD Pro1860 Acetyltransferase, GNAT familySubName: Full=Acetyltransferase, GNAT family; chromosome CDS1718532 492 - 0.357724