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2024-05-02 23:09:38

Gene list

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COG category: Transcription
Organism: Prochlorococcus marinus subsp. marinus str. CCMP1375, CCMP1375; SS120

Number of genes found: 49

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Prochlorococcus marinus subsp. marinus str. CCMP1375, CCMP1375; SS120
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA Pro1648 Predicted nucleic-acid-binding protein implicated in transcription terminationchromosome CDS1506320 279 + 0.408602
NA Pro0352 Predicted Zn-ribbon and ATP-cone domain-containing transcriptional regulatorchromosome CDS339588 474 - 0.362869
NA Pro1780 Two-component response regulatorchromosome CDS1633934 810 - 0.434568
NA Pro0194 Two-component response regulatorchromosome CDS190935 729 - 0.38546
NA Pro1542 Two-component response regulator, CheY-like receiver and wHTH DNA-binding domainschromosome CDS1409678 588 + 0.387755
NA Pro0094 Predicted transcriptional regulatorchromosome CDS104886 741 - 0.384615
NA Pro0782 Predicted proteinchromosome CDS707091 222 + 0.400901
NA Pro0926 Predicted HTH domain transcriptional regulatorchromosome CDS841669 483 - 0.354037
NA Pro1276 Predicted proteinchromosome CDS1177675 552 + 0.336957
NA Pro0035 Predicted proteinchromosome CDS32863 288 + 0.368056
NA Pro1799 cyanobacteria-specific GntR-like HTH domain containing transcriptional regulatorchromosome CDS1651060 987 + 0.394124
NA Pro1601 Uncharacterized membrane proteinchromosome CDS1458214 1101 - 0.409628
NA Pro0464 Predicted RNA-binding proteinchromosome CDS444591 1716 - 0.339744
arsR Pro1578 Transcriptional regulatorchromosome CDS1437040 312 + 0.394231
csgD Pro0177 Transcriptional regulator, contains HTH motifchromosome CDS177893 282 + 0.393617
dinG Pro1718 Rad3-related DNA helicasechromosome CDS1569396 1431 - 0.396925
hepA Pro0047 Superfamily II DNA/RNA helicases, SNF2 familychromosome CDS46600 3189 - 0.368768
lexA Pro1336 SOS-response transcriptional repressor LexAchromosome CDS1240339 609 - 0.423645
mfd Pro1000 Transcription-repair coupling factorchromosome CDS916759 3513 + 0.325648
nagC Pro1072 ROK family sugar kinasechromosome CDS991574 420 - 0.314286
nusA Pro1647 Transcription elongation factor NusAchromosome CDS1504905 1419 + 0.412967
nusB Pro0009 Transcription termination factor, NusBchromosome CDS11292 636 + 0.314465
nusG Pro0231 Transcription antiterminatorchromosome CDS227469 660 - 0.40303
ompR Pro0150 Two-component response regulatorchromosome CDS150619 768 + 0.386719
ompR Pro0156 Two-component response regulatorchromosome CDS157514 744 + 0.426075
ompR Pro1083 Two-component response regulatorchromosome CDS1006867 762 - 0.459318
psb28 Pro0771 Photosystem II reaction centre W proteinchromosome CDS699968 354 - 0.384181
rbcR Pro0170 RuBisCO operon transcriptional regulatorchromosome CDS168990 954 - 0.393082
recG Pro0828 RecG-like helicasechromosome CDS750391 2526 + 0.35867
rnc Pro1762 dsRNA-specific ribonuclease/ribonuclease IIIchromosome CDS1617217 750 + 0.368
rpoA Pro1689 DNA-directed RNA polymerase alpha subunit/40 kD subunitchromosome CDS1552074 939 - 0.428115
rpoB Pro1640 DNA-directed RNA polymerase beta subunit/140 kD subunitchromosome CDS1496129 3291 - 0.39289
rpoC Pro1639 DNA-directed RNA polymerase beta' subunit/160 kD subunitchromosome CDS1494174 1905 - 0.386877
rpoC Pro1638 DNA-directed RNA polymerase beta' subunit/160 kD subunitchromosome CDS1490023 4104 - 0.410575
rpoD Pro1791 DNA-directed RNA polymerase sigma subunit (sigma70/sigma32)chromosome CDS1643541 987 - 0.379939
rpoD Pro0495 DNA-directed RNA polymerase sigma subunit (sigma70/sigma32)chromosome CDS471863 1317 - 0.385725
rpoD Pro0580 DNA-directed RNA polymerase sigma subunit (sigma70/sigma32)chromosome CDS548286 933 - 0.403001
rpoD Pro1363 DNA-directed RNA polymerase sigma subunit (sigma70/sigma32)chromosome CDS1264686 942 - 0.39172
rpoD Pro1863 DNA-directed RNA polymerase sigma subunitchromosome CDS1722731 1020 + 0.408824
rsbU Pro0011 Serine phosphatase RsbUchromosome CDS13310 1410 + 0.37234
spoT Pro0217 GTP pyrophosphokinasechromosome CDS212585 2331 - 0.394251
srmB Pro1094 Superfamily II DNA/RNA helicasechromosome CDS1020284 1812 + 0.379139
umuD Pro0760 UmuD ortholog, peptidase family S24chromosome CDS691340 432 - 0.423611
vacB Pro0988 Exoribonuclease Rchromosome CDS905204 2307 + 0.304725
vacB Pro0969 Exoribonuclease R/ribonuclease IIchromosome CDS890081 1299 + 0.279446
wecD Pro1860 Acetyltransferase, GNAT familychromosome CDS1718532 492 - 0.357724
wecD Pro1802 Acetyltransferasechromosome CDS1655799 462 + 0.372294
wecD Pro0877 Acetyltransferasechromosome CDS798633 891 + 0.344557
wecD Pro0564 Acetyltransferase, GNAT familychromosome CDS535799 543 + 0.38674