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# Helicobacter hepaticus ATCC 51449, ATCC 51449

>HH1836 hypothetical protein
MKQFLPLLLFILSILCILCVGFYPQLCVLLYVAFIGQFIALFMQSYGILK
IKKQAIIKAYYRQDSLLYRYFGRFLFVKVTTFFIALIGSVPLFFMLVFPS
GGDILIFCLLVPLSIYSLRVINFICKANISADFAPTIAKKYTAIFCALLA
CIGEMFIHSYGDSISHTLDIQSHYQSLLHNYGVSEMTCQWWQEFFGFVLL
KKAVLDVLYQSVADTYLHIGLNLLFICGHFASFASFALLCIGNKSCKESA
PLGQENLLSLKQFFAMLFFLIFLYIAFNISIHLQPLAKSNKDLPTLLSTQ
LLSHNNQYIELSIQGAHTFIHTKDLLSLHQRFEENVNDFQQSLNFTTQES
INEYLAQKERIIDEYSKWYFSVRGEYTRLFYAAIGKGEDIAQEQFLFLLK
SYTPYDLQEHLNGIYDTHIENLKLRLEQSFSFFTTHKKPSNATISFALSF
KDINAQISSLSPRATDGVAALLGASVIGAMILKTSGKALAKSTAKAVSKS
VAKKSLSGAVGAGGSIVCGVFAPLCAIGFFVASDYAINSVDEMINEDEFK
RQMREGFDLWELQLKNSLISYNSQLSKQILEKLSLQGDSHIESTPIENKE
>HH0949 hypothetical protein
MNKIQDEFIDNAYRIIGLNVKKARELKGLTQLELSLAIGHKSVSVVSCAE
IYHKKQHFNIEHLLKIAQVLEVNIQNFFEGL
>HH1467 hypothetical protein
MSIKELKYYKDLCDKGDETLKERLKIIQAQKKKNLAQLAKAKENIAMLEY
KEQLYTDLIENGVDYRHSSFSECKRVLKEQVKEQK
>HH1697 conserved hypothetical protein
MRILVIEDDPTLCKNIAEMLNERSYQTDIAENLKDGEYFISIRNYDLVLA
DWDLSDGCGIDIIAQVKEKSPRTPVIIISAQTSAENEIRAFKEGADDFVS
KPFSLEVLLIRIQARLRFWGSSVIEIEDLVINPDEEKITYRGQEIEVKGK
PFEVLTHLARHRDQIVSKEQLLDAIWEEPELVTPNVIEVAINQIRQKMDK
PLNIGTIETVRRRGYRFCYPKKPSEG
>HH0022 two-component response regulator family protein
MNLDALSKLTILYAEDDTDTANLTNMVLGDYVGRLLIAKNGQEALNLFKL
HKIDLVLTDILMPKMNGIELINAIRNSYTHPDVPVVITTAHTETKYLLDA
IRLRVDGYILKPINVEELLHALNKAILPFLQADELASKNLLINAISTFVG
GKKIAIIQFLLANCDEDNIFYGSYEDIIAHLHVSKPTIVKTFKQLIDTGI
LIKIKNKVYKIHPDLDQNIKNSII
>HH1463 conserved hypothetical protein
MQIPSRFSIAIHICLCLEFFNEDSGFNANTDKTHCKKMTSEALADSVGVN
SVIIRNILAQLKSAGLINVARGSGGSVLSKKPQEISLLDIFNAVQSMGGK
ETNGKNRLFKFHANPNELCPLGKNIHLILDSSFEKAQITLESYLSKVKLS
NLLKKLQNLPL
>HH0584 hypothetical protein
MDTQHFIGHQVGETARYLQMFFINELKTYQLSFEQGIILLMVSENPHTCI
SQIAKGLNKNKATISREVNSLVKKGFCIKNQTSHNQRTLSLTLTASGKKA
VSYMKEKIKKTEELLRAQCSQEEIDICFDILHRIRLTLQSSFKKQKLTGG
GADSIST
>HH1656 conserved hypothetical protein
MSAKILLLEDDFVLSEILLEFLQEQGYNVRLCDNAKDALDCAYEQYFDLW
ILDVKVPQGNGFDVLKELRECGKDTPAIFITSLDRIDDLHNGYKVGCDDY
IKKPFELLELQCRINTLLKRPFLHTHKDFIILPNGFKFGILTQLLYDKSG
IVIPLTQKESLLLSLLLQHKGSYVSQEIIFDTLWEYEQEPSEMSLRVYVK
NLRKILGKDSILNQRGRGYCYNA
>HH0302 hypothetical protein
MICEDSSGELQNLDRYMTEVYTQLKKELKISKFPDKDQKLKEILESQRAF
LKKNLQYDSSSNLLKKSYKIRITHLLKLLGEVLDSNNKELCEYARKDKFD
ESKWRKIHPSTHPPFSVGLCAFGRNNRDVFFDSFCTQNGEIKKDEVAKAI
REKSPYIEFPKSYERQIDIDNDGALEKVIITIGSYFGVLWIYKNGKLDEK
VSDRIYGDDLHFSGAKTIENVCINSEEACAALTTYALPSNKISQRLEFYP
ANERGFMPILSELSYGVIEFQGKNYITLLNGRFFEDKDFIYPTTRIYLLE
GNKRELKCTY
>HH1294 fibronectin/fibrinogen-binding protein
MNLALLKGISTYLQNMENILCFKRKEINLFMLLCQDKQGNKHRIYFDMTR
SQSGAFINEQEILNTQEFKAPFDNKLARCATYAKIEQVRIDGENRILQIL
ISQKGHYKLQYFWLICEFTGKHTNVIICDESFVVLEALRHIPLSKSWREV
RVGKVLQPLPQPSKKPLPQEIPSLSQTLDLLHRAYVERYCQSHNTKKQAL
LKSLHTKKENLLQMLHTLPKYDELLASAKQYAHYGEVLFGSLHLLPTHKI
TSSHLSLQDFDGGVLEIELPAFARDLQEAGNWYFTQSKKYHKKAQHLHKQ
IENLQDKIDFLSDKIALIEQCDELSNIFATQDKKPKTKDKSTQTKDIESF
FIEGFKISVGRNAKENQRLLESAKADDLWFHIKDVPSAHLIIHCGKTMPT
NAVIEKSVEILVGLYAVRKGGGDFVVDYTKRRFVKPAQNAQVTYAKHKSI
KYKYP
>HH0748 hypothetical protein
MIGSKLVALRNEHQMTQKDFAERTGISYGTLQAYEYGTQSPRYDYLTKVS
DIFNVPMIFFLDDDTSLGNSYTNPKGFVSDSLDVRKSDSLVSNNPSTIQI
PIYDDVVASAGSGAINDEYPTQSVGIDKGFLRTHFGLSSFLGLSIITAKG
DSMSPTIPENCQLLVQKSVPKEGQICVVRIDDELYVKRLQKLPKYRLISD
NKSYENIELEGREYDIVGVVVGFFKRMI
>HH0283 hypothetical protein
MIQLSLFEEAYAEEMIRATEYGSLVKIHQDKVSGLYLVTEIEEGQEDYTL
SFETYDEALVYFRHFIVDINSNIELKEDGSIGYYPEATQAEDYSNQPTLF
DFTY
>HH1663 conserved hypothetical protein
METKRELNDILINDDELQKQNRTKKLMMMIATALVFLSILIAVVFILTRD
DEELDERHTATNSGLTPIDSQNDTSHSNPQDGFVDIPLANSESNDDPFQQ
ILNDIRSRDPKNTNTQTQVAQNQPQAPATPIEPTKPAQPVLPPKNTTQPT
QKVSDSPKKPATTAATREPAKPAQPVLVQPTQTNKPEPTKPAQNAAPAKP
APTQNQPQAQKNVANVFEDVSVTRMDTSKNGQVAEKGFYVQVGSFANKPS
ADFLKKISNYSYRVYAGTSNGQPTTKYLIGPYHSRTDAGRDLPKFTTLVS
DPVHFEVK
>HH0572 conserved hypothetical protein
MPKLVVFSGAGLSAESGLETFRDNGGLWAQYDPMEVCNYENWLDNFELVH
RFYNLRREELGKVQPNAMHKFLASLPMILNKPRIALSAKKKHKDPIEVIH
ITQNVDDLLERAGVSNVIHLHGELCKIICPQCEHIFDIGYTHFEPHNCPN
CDYGKLKPFIVFFYERAPKYVIMHDIFSQLSSKDCVLVIGTSGNVVDIST
ILAFAESRARIGYKILNNLQYCPSIAESVFDKIFYKPTTQAIAEIEQELE
QFFIS
>HH1163 conserved hypothetical protein
MKMQKRDSKTPLKQDVSNESCDIYENIGFLATQLREKLSTEFDRRIAPLG
IIHHKQAGILWVCSQNPHSQISLCNFASSDKNYVRMYIDDLEFKGLVERK
QNPANRRENLITLTPSGKEYAKKTYQIMKEVHNDLLLEHLSKEEMQELRK
ILYKAVIGLENKSKS
>HH1042 conserved hypothetical protein
MTNKEATHKTTSALLSVARAHFAEYGYFDVALEKIVEEANVTRGAVYHHF
KNKQGLFVAVLESVQEEVAAQIEKQALKSDEAWEQLILGCVGFIKAANAK
ENRQILLVDAPAVLGWEVWRSVDAKHSMSVLQAHIEELKAQGYLREEVDT
QLMTFALSGALNELALQFCANFKKKQEKKLLATLTQFVSGFRKA
>HH1056 conserved hypothetical protein
MGFICAIIFENFRILRINYREKRCKMNAYISECPIETTLNLIGNKWKIII
IRDLLSGTKRFGELKKSVGATKNQSISQKVLTQNLRELEEAKLLKRKVYA
EVPPRVEYSLTPLGQSLECVLRALESWGEGYKREH
>HH0277 hypothetical protein
MGSTELSIIQLTDILKYDNEAQLSQALCAFSCSKNKELETFIREKAIQLE
KQHHTRTYLILKGNTIQAFFALAVNLLETSTLSKTLIKKLSSNHNANTQY
IPCFIIGQLGKSDDSVIKGDEIMEIALSILLEIHNYLGTRFVLLDAVNVL
KVIEFYERHKFVRLPASNDDKQIKMIRYFA
>HH0534 conserved hypothetical protein
MLENKGEYCILKPHFIIGSVDISRSGKIYIKSLNIKDENDFLLENGRYVK
LKKGDIILAKHTTKKARFITLLYSPKTYTLATLVMKKGVIKALELDTKSG
KEHYIELKVSQKSLKALPPHCVVKVELLSGNIVEVLGVLGDAQIDEKIVL
SSYNRVNEFSSNVKEFAQSFGDEVCKEMYPHRVDLSHLPFCVIDPKDARD
HDDAIYFESKTKTLYVAIADVSEYVSCESVLDKEARQRGFSIYFPHKVVP
MLPFELSSGICSLKENKVRLAMVWKITLDKNAQVQKSELLEAFIQSHANV
SYENIESFLQGHKSTLPKEIQKWLKAYLPYIKKHRAMRLQYGYEFQSNEI
KLELDEYQNISSWHKVEHTLAHSIIEESMLLANVQSALMLINNTQKGIFR
IHPPPKEERIQSLLWEIKNMGFELPSTLDFHSLILAIQNQVKGSNMAEVL
DDMIIKSFAKATYSVINIGHFGLGFESYTHFTSPIRRYSDLIVHRILKAL
LHKDKSLSFLLEGLNGIAQEMNIKQKQVSHIEQDFYQRKMLAFTQKLLES
ILPLICTALVVEEDSYAIALDTIPQIKIALSHSFERFKLVKVQIEKVDLL
CGYVQGRVIESISH
>HH1474 conserved hypothetical protein
MIAEFLNQIEFGTLVIPDSIPYAVPLSFCYEDSKIYLHGAKAGRKYALLK
QNPKVAFSAAKPYAYIPSYFLHHTMIPTQFFFSIFLEGQFCVVEDLVEKK
HILTRLVQKYEPNNQTMDMEKGQFIGQEKGVFVGKILVESLTAKAKFGQN
LKQEDWEEIVQDLSNRGDRLDTQTIEQMKKFSPQRLINP
>HH1087 conserved hypothetical protein
MAYTIIEVERKTGIPSTKIRFWIKKGLFPFLQSDKNNVRYFSEVDIEALR
WIEYLRQTKMDIKTIKLYMDLYMQGESTIGERKEIVKNQIEYVKADLAKT
QEILRVLEQKHKFYEELHCANPTKCLVQ
>HH0797 conserved hypothetical protein
MLEKENYDKEVDDSIICLQNVLELEQLQIRMVRTKNCHAKFYLFTSEPKT
NHAHNNIPFYEGSLIVGSSNLTHNGLEKNYEVNLLTKESADINYALEEFN
KLWEDSIEITKNDIDECVKQSYLEILSPKDIYYKLLLTHFGKDFLVKDNE
IPALFKDYIAYDYQIHAVQEGLQKLKKYNGFFLADVVGLGKTLIASVIAK
KCRIDNLKGKILIVAPPSVKKSWKKHFDDINIANYEIYTHDSLHKIPKET
REDIELIIIDESHNFRSSTSNRYKQLENICKIPFNGAHKKIILLSATPQN
NSPKDLANQVYLFCNRRNSLIEGLNNLEKFFSDLQTKFENSMKELKTINQ
NTNLSTQEKESAQNKEKKKLENIANTLRDKLLSHIMIRRTRGDIELLYKD
DMKKQNLTFPKIEPPKDLLYDLDSNSHNLAKETIAFLSKKYNNIGTFSYV
RYLIFPNLTQDGQEEFLSQYGEDEKSKGFYNDTAERLSVLIQKILFKRFD
SSIDAFKATLENQITSHNALITMFSEGTIALPKGYNSREKLYEAVLSDND
KDLQNLLEKKEDKFIHLQSHHFKNDFYQKLQNDRDALEKLLNAWENIQGD
SKLDKLKDSLDKYLPQSQKIVIFTEAATTAKYLAKELIAYTILQIDASNR
EENEQKIKENFDANYPKEKQKDEFNIIITTDTLAEGINLHRANIIINYDT
PYNSTRLMQRIGRINRIGTSFEKIHIYNFKPTHLADEIININSIASGKLQ
SFHYTLGEDSAIYDDEEIVGSKNLYSQIDKNNQETSKDSQYKKALQDFYK
NHKDEFDRIEHLPLKSRTIIQSHQTQSFAYIRHISSHNHAHFYPYHIVPS
QNLLQEPQTQECDFYEMADFLKAHLESCPLKNADMSVHYTHIQSAMQSYK
QSLKSRNTPNPTKKELKPQEITAISKINSCPELDSQVKENLIDLIKNGHP
QLTKETINIKAKNSADFAREVLVIKEKFAPNADLQTSKEQDYNTIDSATH
TEPQIQISITTIHLTKGIK
>HH1041 conserved hypothetical protein
MATSESFKDFVLENLKSALEDTPYHFSAKKMFGEYCIYVIDRGESVPKPI
FLLCDEMLYVKQFEILKPLLESAPLGFPYAGAKESYILDVDSYTTLREVV
LTLAPTLPMPKPKKPKKNKA
>HH0150 conserved hypothetical protein
MLLCDIGNTFLHFYHKGRIWKEKPYALTKKKENLPIYYISVNERFERCLL
ASHPHCVNVNEHIELQTQYVGLGVDRKAACRAIDNGVIIDAGSAITADVM
QEGVHIGGYIMPGLEAYRRMYSDISPVLNREIEPGVNLSILPQNTADAIS
FGVLKSVILMIKNTSRTKKLYFTGGDGKFFARFFENAIYDNTLVFKGMQK
VLEKQI
>HH0352 conserved hypothetical protein
MKSSIIRFSVSLPQNLLETLDERLTHKGYSSRSEIVRDMIREKLNEEIWS
SGAENTQGVAVLTIIYDHHQRELNQRMIDIQHTSTHKGNVEILCNTHVHL
DQHNCLETIILRGNGVHIEDLSIEIGGLKGVKFSKLTRASRFE
>HH1012 conserved hypothetical protein
MKQPKQMRMCVKCRKRFYQKELLRLQSNGYSVCQFSGRGRSFYVCEECLG
QPKTLQVIIKMNKLKPSEHHASTLKEIWNLWKK
>HH1608 two-component system response regulator
MIEDDVELAEIITSYLGQYDMNVTNYDEPYTGMSAVNAKHFDILLLDLTL
PNLDGLEVCKRVAKQNSIPIIVSSARSDVDDKVEALKSGADDYISKPYDP
KELVVRIQTLLRRCNKKSVKEQDKEKDSVFRIDKYSRQVFFKEKKLELTR
AEYEILTLLISKKGHVFSREAIAIESESINPESSNKSIDVIIGRLRSKIE
ENPKNPQYIISVRGVGYKLET
>HH0918 hypothetical protein
MKVIERINEILKEKNLSKKEIANRLIDLGLRASKTGETPTISSIYAYLNG
NIELKADMIPFIAEALGISEQELFSGTDSHRILRKIYARNPLYSKYNHIV
ELLEYISPKSLETLEKTLLSYKQKTLELNHIIEKIK
>HH1768 deaD, ATP-dependent RNA helicase DeaD
MNNLGYLLNVKVKRMDNASLIQQSEESPSVTIKQGLKSKHKQDTQGFDVF
GLKDFVLKGIREAGFSTPSPVQSQSIPIILQGKDLIAQAQTGTGKTAAFA
IPILNTLNRNKDIEALIITPTRELAMQISEEILKLGRFGRIKTICMYGGQ
SIKRQCDLLEKKPKAMIATPGRLLDHLQNGRIAHFSPQIVVLDESDEMLD
MGFLDDIEEIFKFLPNTRQTLLFSATMPEPIKALAMKILNEPAFVKITPT
DVTNQDIEQQYYIINEGERDEAIVRLIETQNPTKSIIFTRMKKEADALAI
RLANRGFKAIALHGDMEQRDRREAIKAFRENKIEILVATDVASRGLDISD
VSHVFNYHIPLNPESYVHRIGRTGRAGKKGVAVTLATPLEYKDLSKIKQI
TKAKLKLCEIKQEYSDDAFSQELSHTKISDKSVAIYEKLKDKIDTTQLCL
KLISLHLEKNSSLKIGLSKEQIAKLEENYESEQPKKSNKKFVGNTRSATK
GNLRGGKGSKNNKRYDNIDRSQPYTNSIWG
>HH0874 flgM, flagellar anti FliA (sigma 28) factor FlgM
MVNGVNTSVKVANMLNRDVLAKQNENNEVKEKEQTQLSKVEQIKEQIKNG
EYKIDLQQTSEKMASNLLNL
>HH1146 fliA, RNA polymerase sigma 28 factor
MADLVSIGTEELIKLARRYDSSLNDSFWGFAKTRVNGAMLDYLRSLDVLS
RANRKLVKSIDYEVSKYFNEHQEEPSDEYLAKVLKEDIAKIKEARMASDI
YALVPIDEQYNAICAENILEDVQKDELMEIIFNVLKKLGKREQMIIQLYY
FEELSLKEISEILDITESRISQITKEIVKKIRQALGDING
>HH0154 greA, transcription elongation factor GreA
MATEPMTNYGYEKLCAELKNLKEVERPRIVVEIDIARSHGDLKENAEYHA
AREKQAFIEARINELGLMLANAQVIDPASLPHNKVSFGSSVKILNLDTDK
EFVYTLVGSMESNPSKGLISVSSPIAKALMGKSEGDEVSITLPNGENEFE
ILEVFYKDIVFEG
>HH0665 hrcA, transcriptional regulator of heat shock genes HrcA
MSKKDLLLSRVIVEYLKHKEPIGSESLKSLMNTKISSATIRNYFKALADE
GLLFQPHVSSGRIPTLGALKSYWYKQLDTKSLVEVDSVKCIQEACFAAEL
FCAVSVEESNRLCNIQRLQDDKLLLEFERIGITLPFSSALERFLHELKGL
EVIDVRKIAHQVRAQSLLDALSCVQSRNLTYFGVGAMAQAYIHNTNEQSF
YSIIDGSMFDFLESGMYCEEVLPKGYMAIMQDIKLKTHPDKKTRMLCIGA
LDRDFAYFYGCIQS
>HH1641 hspR, putative heat shock transcriptional regulator
MYSYDEPVYLISVVARILEIHPQTLRQYEKEGLIQPGRTDGKMRLYSQRD
IDKIKTILKLTRDMGVNLAGVDIILRLKERLDELDKMAGDLREDLAKHKG
SSRVLKTNESSYEIILFQKNKVSPC
>HH0325 hypB, hydrogenase expression/formation protein HypB
MNLSRNERLENNPNLNKKSIQIVSKILSQNDLKAQELREKYKQLGVYVIN
LMSSPGSGKTTLLESLSAFKDFTFCVLEGDLQTNRDAQRLEAKGVSAYQI
TTGEACHLEASMIETALCELQKQCDMQQMDYLFIENVGNLVCPASYDVGA
SLNIVLLSTPEGDDKILKYPTMFMCADAVIVSKADMMQYFGFSLTRVKED
LGQLKANVPLFLTSNKERESIAKVRDFIEQKRAQNYQSHHQF
>HH0458 mfd, transcription-repair coupling factor
MIQSCLYKLLKQGNFPYELLLTKDAKQSQDAYELIKLFDYQKAFVLPELR
IHFGDDLSSFREEFLGVLSVLRTFYAATSPKILISPISSVLYPLPKEQIL
QTFNLSFGQRYDLAVLKKHIVEYGYECVEVVELEGEVSFRGDIVDIFMPY
SESPYRIAFFDDEVESIRIFDTHTQMSNPTEVKEICIAPALFSLNPQQSS
DIQSLVNQSDFDGFNKDIASFGFWFLGENAHFLPLHFCSLLTPQALLEAK
EIYSLDSMEHALTLEQLQQIGCCEASEGYSDILFKPANLASMINAHSNRE
ITLIAHNDIKLKAFDISTQGLHIKYSDAVVNIITPNELILSLNTFTPKIK
HKKPTLKLNEIAQGEYVVHSEYGIGIFEGIKQTQIVGVVRDFIEISYQGE
DKLLLPVENLNMIERYVADSGQIPMLDGLGKGSFAKLKQKVKTKLLEIAH
NIIDLAAKRNLLQGIKIDTQNPSLLSFQNACGFTLTHDQIRSIEEIYTDL
SSGKVMDRLLSGDVGFGKTEVAMNAIYAVCLSGFQAAMIVPTTLLCAQHY
HSLQMRLESFGIRVARCDRFLSTAEKKRLFLGLKNNEVDVVVGTHALLGA
EFAKLGLIVVDEEHKFGVKQKERIKALCAHTHLLSMSATPIPRTLNMALS
HIKSLSSLHTPPVDRIPVRTFIKNAKDSLLKEIILRELRRGGQVFYIHNN
IATIQKKAQEIQSLLPQLKIAILHSKVESTQTENIMLDFANNVYNVLLCT
SIIESGIHLPNANTIVVASADRFGIADLHQLRGRVGRGNKEGFCYFLVED
MEVITPEAKKRLMALEKNSYLGSGENLAYYDLEIRGGGNLLGEAQSGHIK
NIGYGLYLRLLEECINYLSGKGSVQQVQCDLKINLNAYLNPQLIASDKLR
LELYRRLSLCEEISEVNDIESEIFDRFGAPDTMSKAFLELICVKVLANKL
RLKQIMHYGQNITITYMDNTKESIISPSKDWDDVLECIMVFLRKQIQNKQ
S
>HH1272 nusA, transcription termination factor NusA
MEKILDIIDLIAYDKGLESQAVLEIVKEGLIKIAQEEINPHYDYFVEQDA
KERTLKLFYRMKVCADEQDLSEENLGTFLPLSQAKGLGDVSIGDEVDCEL
QLDAMSRGAINKLFLNLEYNLQRSIENQILQNFRAMVGKIVNGQVVGIDD
SGNTFIEIESIRAILPQKNRIKGENFKVGDCVRAILKFVGINRNGLQVEL
SRTTPKFLEELLAMEVPEIKDNEVIIHKSARIPGDRAKVAVYSNSARIDP
IGCCVGVKGVRINAVSKELANENIDCVEYHSTLEIFVAKALTPAQVVSVK
IEEAQEGERKKAIVQIKSEQKSKAIGKNGVNIRLASMLCECDIELQEITE
SKPLENENTPAEKTGIDALSSLFKS
>HH0037 nusB, transcription termination factor NusB
MATRTQAREAVIGMLYAYDLGNESIIEIARSMLEEKKIKNKQQDFAFSLL
QGVIEHLSQIDLCIAPYLKEWEFSRLGGMERAMLRLGAFEILYTETDTPV
IINEAVELGKMYGGEDNAPRFINGVLDALSKAHTKNKKSEDCSKTQDIIN
DALGKES
>HH0366 nusG, transcription termination factor NusG
MEWYAIQTYSGSEKVVGEAIRNLIVQNQMQDRFGDVVVPTESIIETKKKI
VDRSLYPGYVFIQVDLDTKLWHMIQSLPKVGRFIGESKKPTPLSEADIAK
ILEKVRNPSAPKPKISFEQGEVVRIIDGPFVNFTGTVEEYDLEHKKLKLN
VSIFGRSTPVEILYSQVEKII
>HH0423 parB, transcriptional regulator involved in chromosome partitioning ParB
MAKKKLAMGRGLGAILSETAEAYEQNLSDNSSLVLELDVDIIKPNPYQPR
KTFNPQALQELSESIKEHGLLQPVIVYDNGDGDYVLIAGERRLRASKLAG
LDNIKAIVAEIDFKHMRELAIIENIQREDLGAIELALSYQELLEEYDMTH
EELSKRINKSRAQITNTLRLLQLSDEIKDLLNENKITQGHAKMLVTLDNR
EQKLVADSIIGQKLNVRDTETLIKKIKDKKETLSKKNILKHTQTLDKELL
YALQSIFKDMGIQSHISASKMSIIFQNDAEITTLIKKMSK
>HH1156 recG, ATP-dependent DNA recombinase RecG
MYDFSSFIQHLDKTNQSRLKKLKINNLLALIITHVPKSYIDTTLTPTLTP
HSNVLIKVHIHDTKTLGFGKNARLSIYATMSDFNQPLEMIIFHPKPFHKK
IFSEDSTHYVLGKLETYNQRYTLIQPKSIKHINTITPHFKTTLLSAKAMQ
ELTQAAINIDNLLSCGIPQEIAQKIYEIFTPSSHFMLAFKKHNALPQEHM
NALKFIEIYHYLHLLSRKKIHFKAKYRCNNDITPFIESLPFSLTSGQCSA
IKDISLDLDSKIAARRLIMGDVGCGKTIVILCAVMMTYPHTSILMAPTTI
LATQLYEEAKRLLPPFIKIHLITAKTRQDLQEAHFIIGTQALLYREITLE
NVALVMSDEQHRFGTNQRYGLEKIGQDAHKNARPHILQFSATPIPRTLAM
INAQFIDLSVIQDLPFKKDISTSIVDKSTFKTLLSALQNEINQGHQAIII
YPLVEESEHLDYLSLNEGLSFWQKHFNSVHYTSGKDKNKQNVIDDFAHNG
SLLLATTLVEVGISLPKVSTIVIVAPERLGLATLHQLRGRVSRNGLKGYC
YLYTHQPQNERLKAFCSTLNGFDIAELDLKYRNSGDLLSGERQSGDEFIY
FDMGSDENIIKEAKMLIQQQNAQKGRLT
>HH0023 rho, transcription termination factor rho
MADNKRTHTPVEGYQLEDLRIKSIKQLINIAEEIGVENPSDYRRQDLIFE
ILKTQVNQGGYILFSGILDITNEGYGFLRALTESLADSQNDTYVSQSQIR
RFALRNGDIVTGQVRAPKDQERYYALLKIEAINYMSLEENKNRPLFDNLT
PLFPQEQLKLEYESSKVTGRMLDLFSPIGKGQRALIVAPPRTGKTELMKE
LAHGIAKNHPDVELMVLLVDERPEEVTDMERSVKGQVFSSTFDMPATNHI
RVADLVIESAKRKVEMGKDVVILLDSITRLARAYNAATPSSGKVLSGGVD
ANALHKPKRFFGAARNIEQGGSLTIIATALIETGSRMDEVIFEEFKGTGN
SEIVLARSIADRRIYPAFDVLKSGTRKDDLLLGKDNLTKVWMLRNVMHTM
DDIEALTFIYSKMKQTENNEEFLNMMNSQE
>HH0699 rnc, ribonuclease III
MSKSILPKSPQLLEKKLGYVFQNQQLLLEALTHKSCKKQYNNERLEFLGD
AVLDLLVGEYLFKKFPLAKEGELSKLRACIVNEKGFMKLAQSLDLGAYLY
ISQSEENNNGRQKASILSNAFEALIGAIYLESSLTYVQSIIYDLLEYNYI
KIDLDSLFMDYKTALQEITQAFYGEIPTYTLISESGPDHKKSFEIALSVQ
GKEYARASGNSKKEAQQKSAQIAYKKLYSKMNKTHHKGEK
>HH1403 rpoA, DNA-dependent RNA polymerase
MNMIKIEPYIPTDISIEEISTNRIRISAYPFESGYAITLAHPIRRLLLSS
SVGYAPTALRIQGVTHEFDSIRGIVEDVSHFITNLKNIRFLIKDTESDNV
QLHYEFKGPMVLSANELVNDMVGIVNPEAYLATINENASLSFSLIVQKGI
GYVPSESIRGKISEDYIPLDAYFTPVKKAVYEIENVLVEDNPNYEKIVFD
IETDGQIEPITAFKEAIAIMHKQMSIFGVDLSTASSGTRNISEDSGELKT
LMIKIDTLNLSARCFNCLDRSGLKYVGELVIMSENELKNIKNMGKKSYDE
IADKLEELGYPVGGEIADDILPLLNRKLAKLKSN
>HH0361 rpoB, DNA-dependent RNA polymerase beta subunit
MANFTKLKNRLRADFTKNPQSIDVPNLLLLQRNSYDDFLCVDSDKESGIE
RVFKSVFPIQDSQNRITLEYVSCKFGKPKYTTNEAMVRGVTYAVSLQIKI
RLVLWEKDEKTGERLGIKDAKEQNIFVRDIPLMTDRTSFIINGVERVVVN
QLHRSPGVIFKEEESSASSNKLIYTGQIIPDRGSWLYFEYDSKDVLYARI
NKRRKVPVTIILRAMGYSKQDILKIFYPLQRVKYKKGKYLIPFDVDSIGN
RAEFDIKDAKGNLLVSSGKRLSTKKIKELKEAKIDLIEYPLENLTNKFLA
EPIINAQGEVLFDTLTQLDESKLKKLLELKINEFVIANASAAGVDNSIIN
SFMADAESLKMLRQSEKIDDENELAAIRIYKVMRPGEPVTKEVAKSFVRQ
LFFDPERYDLTRVGRMKMNHKLQINVPDYVTVLTHEDIIRTIQYLLKVKN
GLGKIDDRDHLGNRRIRSIGELLANELHTGLVKMQKAIRDKLTSLSGAFD
TIMPHDLINGKMITSTIMEFFTGGQLSQFMDQTNPLSEVTHKRRLSALGE
GGLVKDRVGFEARDVHPTHYGRICPIETPEGQNIGLINTLSTYTRVNDLG
FIEAPYRKVENGIVSQEIVYLTAAQEEGIVIAPASTAVDKNGHIIEDLIE
TRKDGEIILSEKSRVQLIDLSPRMLVGVAASLIPFLEHDDANRALMGSNM
QRQAVPLLKPDAPVVGTGIEQIIARDSWEATKATRSGVVERVDAKNIYIL
GEDDNGAYIDHYHLGKNLRTNQNTCFSQQPIVRQGDRVEQGQIIADGPSM
DNGELALGKNIRVAFMPWNGYNFEDAIVVSERLIKEDAFTSIHIYEKEIE
ARELKHGLEEITADIPGTKEAETAHLDESGIVRIGTYVSAGMILVGKVSP
KGEVKPTPEERLLRAIFGEKAGHVVNKSLYCPPSLEGTVVDVKIFTKKGY
EKDARAISAYEEEKRVLDIEHHDRLTMIQQEETLRISLMLSKEKLLSEVK
VADKVFKKGAQIPKEELSVLNPFILSTLIKHYPKEIQTRYEQIKTNFLEQ
KKTLGEEHEEKLSILEKDDILPSGVVKLVKIYIATKRKLKVGDKMAGRHG
NKGIVSNIVPMVDMPYTADGEPVDIVLNPLGVPSRMNIGQILEVHLGLVG
KRLGQQIQEILSSQSKQWLDTLRSKMIEIAQVVNSDDKSMIEFLKNLDNE
ALLAYARDWSNGVKFAIPVFEGIEQEKFDKLFSLVKVDMDGKTELYDGKT
GEKMRERVNVGYMYMLKLHHLVDEKVHARSTGPYSLVTQQPVGGKALFGG
QRFGEMEVWALEAYGAAHTLKEMLTIKSDDTEGRRGAYKAITKGEHVGES
EIPETFYVLTKELQSLALDVNIYGDEQDENGMPVPIAIKEDERPKDFSSF
QLVLASPEKILSWSNGEVKKPETINYRTLKPERDGLFCTKIFGPVRDYEC
LCGKYKKMRYKGIVCEKCGVEVTKAKVRRSRMGHIELVAPVAHIWYVSSL
PSRIGTLLGVKMKDLERVLYYEAYIVKSPGEAFYDNEGSKPILKYDVLNE
EQFQSINQRFEHTGFVAQMGGEAIKELLEELDLILLLNTLREEIRSTNSE
AKKKTIVKRLKVVESFINSGNRPEWMMLTILPVLPPDLRPLVALDGGKFA
VSDVNDLYRRVINRNQRLKRLIELDSPEIIVRNEKRMLQEAVDALFDNGR
NANAVKGANKRPLKSLSEIIKGKQGRFRQNLLGKRVDFSGRSVIVVGPNL
KMNQCGLPKNMALELFKPHLFAKLEEKGYATTLKQAVKMVNQKTNEVWEC
LQEIVNGYPVLLNRAPTLHKQSIQAFHPKLIDGKAIQLHPLVCSAFNADF
DGDQMAVHVPLSQEAIAECKILMLSSMNILLPASGKAVAVPSQDMVLGLY
YLSLEKKGVKGEHKILASIDEIVMAIEMGELDINARIKTVHNRRVIDTTA
GRMILSSILPDFVPLNLWNQTMKKKDIGTLIDYVYKEGGLGITATFLDNL
KNLGFKYATKAGISISAADIIIPHNKATMIDEAKKEIKRIQGEFEQGLLT
AQERYNKSIDIWTETSEKMGKLMMEKVKNDKEGFNSIYMMADSGARGSEA
QIRQLSAMRGLMAKPDGTIIETPITSNFKEGLNVLEYFNSTHGARKGLAD
TALKTANAGYLTRKLIDVSQNMKVTIEDCGTHEGVEITDITVGSDMIEPL
EERVVGRVLARDVIDPIANEILLSEGVLIDSTMARRIKEANVKSVMIRTP
VTCKAQKGVCAKCYGLNLGESKMVKPGEAVGVLAAQSIGEPGTQLTLRTF
HVGGTASRSTEEKQIVAKKEGFIRYYNIRTYTNSKGQKIVANRRNAAILV
VEPRIKAEFDGELEVENVHDEVHITIVGDKKRSETYRLRKDDVAKQNELA
GVAGKIEGKLLVPHESGYKVKAGGSIVDTIMDSWNIPTRIPYGSELKVED
NAPISQKITAKEKGIVKFYTLRADTLERNHNVKAGMVVSEKGMFAVIADQ
NDREAIRHYIARTSKILVDDNSEVDINTLISEPTSTEQIVVAEWDAYSEP
IIADQAGIVSFRDIIAGLTVSEQEDENTHQKNFVINEYVPAGYKPMLVVT
TKDGKEISYRLESRTSIAVNDGDKVEIADIIAKVPKALAKSKDITGGLPR
VTELFEARKPKDTAILSELDGTVSFGKPIRGKERIIITAADGRVAEYAVD
KNKKILVHEQEFIHAGEAMTDGVISSHDILRISGEKELHKYIVSEVQQVY
RRQGVSIADKHIEIIVSQMLRQVKIVDSGNTKFIEGDLASKRHFKEENER
ILSIGGEPAVAEPVLLGITRAAIGSDSIISAASFQETTKVLTEASIAAKK
DTLDDLKENVVLGRMIPVGTGLYKNKKFHYRCEKQEEYEEDEEE
>HH0545 rpoD, RNA polymerase sigma 70 factor
MSEKSDKVSKKSKEVNAELESLFKEEDSDYITYEKIAQIILKAPTAAQVK
KIKDLSKKYKKQLLSSSEIAKMLNTQEQIKRQADKKKMLNEELEDEFDFM
KDKELLEWSRSDSPVRMYLREMGQISLLTKEEEISLSKKIELGENTILDA
ICSVPYLIDFIYDYKDALINRERRVKELFKSFDDEEEENEEEEEEFDMLD
DEEASRKSNSKKDQKRIEKVMESFKALDKAKKEWLKVLETPIVEGEDELA
HILLLSHKKHILKMKLLDLGPTSKLIGELVKAMENTLKSGDGFERELKRL
EYKLPLFNDMLVENHQKILANITTMSRDEIAAMVPETTMVSVYVELKKLF
QTKEASEGGFNLEPEKLKEILEQIKRGKSISDKAKAKMAKSNLRLVVSIA
KRYTNRGLPFLDLIQEGNIGLMKAVDKFEYKKGFKFSTYATWWIRQAISR
AIADQARTIRIPIHMIETINRIHKIMRKHVQETGKEPDIDFIAKEVGLPI
DKVKNVIKITKEPVSLDAPIGSDDDGKFGDFVEDKSSVGPMDYILKEDLK
VQIDEVLEQLNDREKAVIRMRFGLLDDESDRTLEEIGKELNVTRERVRQI
ESSAIKKLKHPKVGRKLKNYIEE
>HH1074 rpoN, RNA polymerase sigma 54 factor
MSVGGKLRSNLNIKTRLSTTLKSWLPILQSGVMELEETLNAIVEENPYAS
VQSQMTQSLQSKSYKKSHLSSNTSNDRFESIHISQQSLYEVLEEQIDSTL
FPTEISRTIALKIVENLNDEGYLDTAVGEIACELGLNEEDVERVRQRFAY
LEPYGVGAKDVIESFLFQLSNTELEGESYDLAACVIRDLQNHSKYKNHAA
YNEVMKIIKSFRNPPAIEFGAKEAEVIPDIFIFERVKTDALKNTTYELEV
SINDVYYPKILIEEKIKGIEAHKESAEFLKTKLKEAKDLVDALDMRKATI
LKIAIALRENQYDFFMGGEIRPMKLKDIAQDLGYAPSTISRAIANKYLEC
DRGIFPIKSFFTAAIDGDTSNASIKDFILNLIKNEDRKKPLSDLKILKSV
EQKFALKMVRRTITKYRQQLNIASSSERKKLYEMSV
>HH0832 rpoZ, conserved hypothetical protein
MDTLRTEEIAAKALKRVHNDRYLLASLIFERVKELGEGAKPLVDMDVKTY
KLPDIAMREIAEGKVELTSIEDRE
>HH0831 spoT, conserved hypothetical protein
MDFFTQLAQINSIESAVAKLHSLTQVTPKVQKAIDVATLAHEGQLRKSGI
PYVVHPLCVACIVAFYGGDETMLCAALLHDVVEDTLCSLEDVQREFDWDV
GHLVDALTKIVEIRNEELSSNFNEKLAASALSFRKMLLASIKDIRALVIK
ISDRMHNMLTLDALPPHKQKRIAEETLMVYAPIAHRLGIASLKSELEDRS
FFYIFPQDYKKIEQYIKDNSQSITLKLNEFTQKISMILLQNGFNEKDFTI
KSRVKRYYSIFLKMQRKGVSIDEILDLLAVRIIVPTSLECYKVLGLLHLQ
LKPVVSRLKDYIAIPKENGYQTIHTTIFEGANIYEVQIRTFDMHKSAQYG
VAAHWKYKSGGREPNLEWLNNLQYQNDTIEEFYELAKNDLYKEDMVVFSP
TGDIYNLPVGAVALDFAYAVHSDIGDNAKVALVNHQKVSLLQPLKNGDIV
RIIVATDNKEIRPRCTWIDAVKTSRAKNHMKIQCQNKLREIDKKAALNIL
KTIFDSSQDTILAYLKENKLDSHIYRAAYDLIFLKEVKNSIRGNFAREAN
FLGKIKINMLKFKTLVFDNIVLQTNRNISEAIFDFCCHPKFGDEILAIKT
AQKAYIHHKMCERAIREMEQGSEMLFVQWANEQKDTYKMIVALENQKGAL
ARLCGLCAKLDCNIVSVEYDTLKQQFSTYCEICFESKTRDIKTLREIFNK
KYKIIELSSLKDAYLS
>HH0412 ureG, urease/hydrogenase-associated predicted GTPases UreG
MVKIGICGPVGSGKTALIESLTRKMNEQYSLAVITNDIYTQEDAEFMSKN
SVLPSERIIGVETGGCPHTAIREDASMNLEAVEEMQERFPDIEILFIESG
GDNLSATFSPELADFTIFVIDVAQGDKIPRKGGPGIMRSDLLIINKIDLA
PYVGANLSIMERDAKKMREDKPFLFTNIRAKEGIDAVVEWIKKYALLEDI