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Gene list

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COG category: Transcription
Organism: Shigella flexneri

Number of genes found: 9

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# Shigella flexneri

>gid:1155132  S0062  orf, hypothetical
ATGGAAATAAATGTCACCGCGCCAGCATTGTTGACGGATGAGCATATACT
TCAGCCATTTGACTGTGGAAATGAGGTGCTAAGTAACTGGTTACGTGGTC
GGGCTATGAAAAACCAGATGCTCAATGCTTCTCGCACGTTCGTTATTTGC
TTGGAGGATACTTTACGTATTGTGGGATACTACTCATTAGCTACTGGTTC
CGTCACTCATGCCGAGCTTGGTCGCAGTTTGCGGCATAACATGCCCAATC
CTGTCCCTGTTGTTCTGTTAGGGCGTCTGGCTGTTGATGTTTGTACCCAG
GGGCATGGTTTCGGTAAATGGCTACTAAGTGATGCCATTCACCGGGTTGT
CAATCTGGCTGATCAGGTTGGCATTAAGGCTGTTATGGTACATGCAATTG
ATGATGACGCCAGAGCATTTTATGAGCGTTTTGGTTTTGTTCAGTCAGTT
GTGGCACCTAATACCTTGTTTTATAAAGTCTGA
>gid:1155176  S0103  orf, hypothetical
ATGTCCTGGTTAATATCTCAGTGTGCTCATCAGTGCACTGATAATAAAAA
GACGGAGACAGATGCCATTTACGATAAAGTTCGGAGTTCTTATTTGCTTT
CATGTATTCTGAAAAAAAACAAAAATGTTGGGCTTATTCTTCATGCACCA
TCATTTGTTTCTGTGTCTGAAAAAATCGCCAGAATTGTGATGGCAAATTA
CTCCCGTAACTGGAGTAATTCCGAGTTGGCCAGTGCGGTTTTAATGAGTG
AATCTTCTTTAAAAAGAAGAATGTACAAAGAGGTCGGTTCTATAAGTACA
TTTGTACATAAAATAAAGCTTACAGAAGCTATCAGGAAATTACGAAGGAC
AAATACTCCCATTTCTGTCATATCATCTGAGTTAGGTTACAGTTCACCAT
CGTATTTTTCTAAAGTCTTCTTTAAATATTTAAAGACATACCCTCAAAAC
ATAAGGAAGAAAAATGGTCGGTAA
>gid:1155178  S0105  orf, hypothetical
ATGGGGGACTCTGTGACACCGGAGATACTTGGCAACATGATTCGTCAGTA
TTTCAGTCAGGTACGAACTGAAAAAGAGAGCATACAGGCTCTGAATCATC
TGCGCAGAGTGCTTCATGAGGTCAGTCCTTTTGCACAGGAGCCTGTGGAC
TGTGTGTTGTGGGTGAAAGCGGATGAGGTGGTGGCCAACGATTACAACCC
TAATGTCATGGCACTAGGTGAGAAAAAACTACTGAAACAGTCTCTGGAGA
AAGATGGTTTCACACAACCGGTGGTGGTGTCAGAGGAGAAGAATCATTAT
CTGGTGGTGGATGGTTTTCATCGTCAGTTACTGGGGCGGGAAGCAGATAC
AGGAAAACGCCTGAGGGGCTGGTTGCCTGTAGCCTGTATTAATCCGGAGA
GAAAGGGACAGGCCGCACGTATTGCCGCGACCATTCGACATAACCGGGCC
AGGGGGAAACACCAGATCACTTTAATGTCTGATATTGTCAGGGATCTTTC
ACGTCTGGGCTGGACGAATGAACGTATTGGTACAGAGCTGGGAATGGACC
AGGATGAAGTGCTGAGGCTGAAACAGATTAGCGGGCTGACAGAGTTGTTT
CAGGAAGAGGATTTCAGCTCGGCTTGGACGGTTCGTTGA
>gid:1155185  S0111  orf, hypothetical
ATGGGATGTGTAACTGCACCAGAACCTTTATCCTCATTTCATCAGGTCGC
TGAATTTGTCAGCGGTGAAGCTGTACTTGATGACTGGTTAAAGCAGAAGG
AGCTAAAAAATCAGGCAATCGGAGCCACCCGGACTTTTGTTGTATGCAGA
AAAGGTACGCAACAAATAGTCGGTTTTTACTCACTGGCCACTGGTAGTGT
CAATCATACAGAAGCTACAGGTAACCTTCGGCGCAATATGCCAGACCCCA
TTCCTGTAATTATACTTGCACGCCTGGCTGTAGATGTGTCATTTCGAGGA
AAAGGGCTTGGCGCGGATTTACTTCATGATGCAGTTCGTCGTTGTTACAG
GGTTGCCGAAAATATCGGTGTGCGTGCAATTATGGTTCATGCGCTTACGG
AAAACGCAAAACAGTTTTATATTCATCATGGTTTTAAGCCATCAAAAACT
CAGGTGCAAACATTGTTTCTTAAACTCCCTCAATAG
>gid:1155358  merR  Tn501 repressor
TTGGTTCAGACATGCGCTTGTCCTTTCGAATTGAAATTGGATAGCGTAAC
CTTACTTCCGTACTCATGTACGGAGTCAAGCGATATGGAAAACAATTTGG
AGAACCTGACCATTGGCGTTTTCGCCAAGGCGGCCGGGGTCAATGTGGAG
ACCATCCGTTTCTATCAGCGCAAGGGCTTGTTGCTGGAGCCTGACAAGCC
CTATGGCAGCATCCGCCGCTATGGCGAGGCGGATGTAACGCGGGTGCGCT
TCGTGAAATCAGCCCAGCGGCTGGGCTTCAGCCTGGATGAGATCGCCGAG
CTGCTGCGGCTGGAGGATGGCACCCATTGCGAGGAAGCCAGCAGTCTGGC
CGAGCACAAGCTCAAGGACGTGCGCGAGAAAATGGCTGACCTGGCGCGCA
TGGAGGCCGTGCTGTCTGAGTTGGTGTGCGCCTGCCATGCGCGAAGGGGG
AACGTTTCCTGCCCGCTGATCGCGTCACTACAGGGTGGAGCAAGCTTGGC
AGGTTCGGCTATGCCTTAG
>gid:1155230  mxiD  Type III secretion protein
ATGGAAGGGTTTTTTTTTGTCCGAAATCAAAATATAAAATTCAGTGATAA
TGTGAACTATCATTATCGCTTTAACATTAATAGTTGTGCAAAATTTCTTG
CTTTTTGGGACTATTTCAGTGGTGCTCTAGTAGAGCATAGCCATGCTGAA
AAATGTATTCATTTCTATCATGAGAATGATCTTCGGGATAGTTGTAATAC
CGAATCGATGCTTGATAAGTTAATGTTAAGATTCATCTTTTCATCTGACC
AGAATGTAAGTAATGCACTGGCTATGATACGAATGACTGAGTCATATCAT
TTGGTTCTTTATCTTCTGAGAACTATTGAGAAAGAAAAGGAGGTAAGAAT
AAAGAGTCTGACAGAGCATTATGGTGTGTCGGAGGCTTATTTTAGATCTT
TATGTAGAAAAGCTTTAGGGGCAAAAGTCAAAGAACAACTGAACACTTGG
CGGTTAGTAAATGGTTTATTAGATGTATTTTTGCACAATCAAACAATCAC
TTCAGCTGCCATGAATAATGGGTATGCATCAACATCCCATTTTTCAAATG
AGATAAAAACACGACTAGGCTTTTCTGCAAGAGAATTATCGAATATTACT
TTTTTAGTGAAAAAAATAAATGAAAAAATTTAA
>gid:1155105  parB  plasmid segregation protein
ATGGAAAACAGAAAGCACCGACCGACTATTGGCCGTACGCTGAATACAAA
TATCCTGAATAATACTGAAGAAATATCGGCTCCAGTTCATGTATTTACCC
TCAATACTGGCCGAAAGGCAAAATTTACTGAGATCAAGGTTGATCATGAC
AAAGTGGACACTCAAACTTTTGTGGTTGAAGAGGTGAATGGCCGCGAACA
GACAGCCCTGACGCCGGACTCACTAAAAGACATCACCAGAACTATACGTT
TACAACAATTCTATCCATGTATTGGGATTCGGACTGGCGATCTTATTGAG
ATTTTGGATGGTTCCCGTCGTCGGGCAGCAGCTTTGCTATGCAAGGTTGG
ATTACGTGTACTTGTAACGGATGATGAGCTTACTGTTTCTGAAGCTCAGC
ATCTGGCGAAAGATTTGCAGACGTCACTTGAACATAATATTCGTGAAATT
GGGTTGCGTTTAGTACGTCTCAAAGAGGCCGGTATGAACCAGAAGCAAAT
TGCGGAAAGAGAGGGATTGTCGGCAGCTAAGGTGACTCGTGCCCTCCAAG
CAGCGTCCGTACCTAAAGATTTTGTGTCTCTTTTTCCTGTTCAGTCTGAG
CTGACATACGCCGATTACAGGCAACTGGCTGAATTAAGTGAACGACTGAG
GCTGGGTGATATATCTATTGATGAAGTTGTGAAGAATATCTCGCCGAGTA
TTGAGCTTATTACTGCTGATGACAATCTTTCTGAAGACGAGGTTAAAAAC
AGTATTATGCGGCTTATAACCAAGGAAATGTCTTCATTGCTTGATTCAGG
AGTAAAGGATAAAGCGGTTGTAACTTTGTTATGGAAATTTGATAGTAAAG
ATAAATTTGCTCGAAAACGAGTAAAGGGACGTACGTTCTCATATGAATTC
GGCAGATTACCGTTGGAAGTTCAGGATAAGTTAGATCGTATGATTGCTCT
TGTACTAAAAGATAATCTGAATTCGCTGTGA
>gid:1155208  virB  transcriptional activator
ATGGTGGATTTGTGCAACGACTTGTTAAGTATAAAGGAAGGCCAAAAGAA
AGAGTTTACACTCCATTCTGGTAATAAAGTTTCCTTTATCAAAGCCAAGA
TTCCTCATAAAAGGATCCAAGATTTAACCTTCGTCAACCAAAAAACGAAT
GTACGCGATCAAGAATCCCTAACAGAAGAATCACTAGCCGATATCATAAA
AACTATAAAGCTACAACAATTCTTCCCTGTAATAGGAAGGGAGATTGATG
GTAGAATTGAAATTCTGGATGGCACTCGTAGAAGAGCATCTGCAATATAT
GCAGGAGCAGATCTTGAAGTTCTATATTCAAAAGAATATATATCTACTCT
TGATGCCAGAAAACTAGCAAACGATATACAAACAGCAAAAGAGCATAGCA
TCCGAGAACTTGGTATTGGTCTTAATTTTCTGAAAGTATCAGGGATGTCC
TATAAAGACATAGCCAAAAAAGAGAATCTGTCTCGCGCGAAAGTCACTCG
TGCCTTTCAGGCAGCAAGCGTTCCACAGGAAATAATATCTCTATTTCCAA
TCGCGTCAGAACTTAACTTTAATGACTACAAGATATTATTCAATTATTAT
AAAGGACTTGAAAAGGCTAATGAATCTCTTAGTTCTACACTACCAATATT
AAAGGAAGAAATAAAAGACCTTGATACAAATCTGCCCCCGGACATATATA
AAAAAGAAATTTTAAACATCATAAAGAAAAGCAAAAACAGAAAGCAAAAC
CCTTCGCTAAAAGTTGACTCGTTATTTATTTCTAAAGACAAACGGACTTA
CATAAAAAGAAAAGAGAATAAAACAAACAGAACTCTAATATTTACATTAT
CTAAAATAAACAAAACAGTTCAGAGAGAAATAGATGAAGCTATTCGGGAT
ATAATTTCTCGCCATCTATCGTCTTCATAA
>gid:1155119  virF  transcriptional activator of virulence loci
TTGGTATATTCTGTTGAATTTATGATGGATATGGGACATAAAAACAAAAT
AGATATAAAGGTTCGCTTGCATAACTATATTATTTTATATGCAAAAAGGT
GTTCAATGACGGTTAGCTCAGGCAATGAAACTTTGACTATCGATGAAGGG
CAAATTGCTTTTATAGAGCGAAATATACAAATAAACGTCTCCATAAAAAA
ATCTGATAGCATTAATCCATTTGAGATTATAAGCCTTGACAGAAATTTAT
TATTAAGCATTATTAGAATAATGGAACCAATTTATTCATTTCAACACTCC
TATTCTGAGGAGAAAAGGGGGTTAAACAAAAAAATATTCCTCCTCTCTGA
GGAGGAGGTTTCTATCGATTTGTTCAAATCTATAAAAGAGATGCCTTTCG
GCAAAAGAAAGATCTATAGTTTAGCTTGCCTTTTATCAGCTGTTTCTGAT
GAGGAAGCTTTATATACTTCGATATCGATAGCTTCTTCTCTTAGTTTTTC
TGATCAGATAAGGAAGATTGTTGAAAAAAACATCGAGAAGAGATGGCGTC
TTTCTGATATTTCAAATAACTTGAATTTATCAGAAATAGCTGTTAGAAAA
CGATTGGAGAGTGAAAAATTAACATTTCAACAAATCCTTCTTGATATTCG
CATGCATCATGCAGCAAAGCTTTTATTGAATAGTCAAAGCTATATTAATG
ATGTATCAAGACTTATCGGAATATCAAGCCCATCTTATTTTATAAGGAAA
TTTAATGAATATTATGGTATAACTCCAAAGAAATTTTACTTATATCATAA
AAAATTTTAA