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Gene list

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COG category: Transcription
Organism: Buchnera aphidicola str. Bp (Baizongia pistaciae), Bp (Baizongia pistaciae)
Gene type: CDS

Number of genes found: 17

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# Buchnera aphidicola str. Bp (Baizongia pistaciae), Bp (Baizongia pistaciae)

>bbp433 cspE, cold shock protein CspA
MSKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQSNGFKTLSEGQSV
EFEITEGAKGPSAANVISL
>bbp335 deaD, ATP-dependent RNA helicase
MTHTNMTFSSFGLNSCIITALNDIGYVQPSPIQAACIPYLIKGKDVLGMA
QTGSGKTAAFALPLLHNIKLDVRVPQILVLTPTRELAVQVAEAFSNFSKK
LIGVHVLALYGGQRYDLQLKSLRKGPQIIVGTPGRLLDHLKRRTLSLSNL
HSLVLDEADEMLRMGFIEDVETIMTEIPDRHQTALFSATMPEAIRRISRR
FMKNPKEIRIQSNITTRPDIQQSYWMVYGKKTDALIRFLEAEDFSATIIF
VRTKNATLEVSEVLERYGYNSAALNGDMNQSLREQTLEKLKDGRLDILIA
TDVAARGLDVDRISFVINYDIPMDSESYVHRIGRTGRAGRKGKALLFVEN
RERRLLRNIERAMNISISEVNLPKSDFLSKRRLEKFAQKVQIQLDSKDLH
EYRGLLPKLQPNNNSLDIESLAAALLKMAQGERSLIVKPESIVRARHLKI
KDTYRNNNYKSLNYVSRYNRDKNVDLYRIDVGRNDGVEVRHIVGAIANEG
DISSRKIGNVRLFSNYSTIELPKGLSNTLPKTFIRTKILNKFINIKLLYN
SNFKGNYNDIKDVKVYNSNKLRSKKMNNKKFVSSGVRKKIKTNISCNRRR
SV
>bbp347 greA, transcription elongation factor GreA
MNDQIPMTILGVEKLRKELEMLKTIKRPKIIKSIIEARQHGDLKENSEYH
AAREEQGFCEGRIKEIELKLSKARIIDITKVKNNGVIIFGSTVTILNLTS
NQEFTYRIVGDDESNFKRKLISINSPMSRGLVGKKVSDVATIKTPVGDVK
YKILKIEYN
>bbp275 mfd, transcription-repair coupling factor
MLIKSLVQKNQVYFTNNSLDEKNICDLSKLKINQPIVHFEHGVGRYQGLT
TVTTRNIKTECVVINYAQNSKLYVPITYLYLISRYIGTSKKDIPLHRLGN
DLWNKEKKKANEKAYDSAAILLNIYSHRISQKGFSFKKHHTKYKIFCERF
PFTLTPDQDSAINSVLSDMYKSTPMDRLVCGDVGFGKTEVAMRATFLAVC
NQKQVAILVPTTLLAQQHFNNFTLRFKYWSTKIEILSRFQSETKCNEIIN
NVNIGNVHVLIGTHKILLKNLKWKNLGLLIVDEEHRFGVHHKEQIKLISN
NIDVLTLTATPIPRTLNMAFVGIRDLSIIATPPKQRLIVKTFVREFSYTV
IRKAILREILRGGQVYYIYNNVNKIERKKIELKKLVPEANIRIGHGQLRS
TDLESIMNDFYHKRFNVLVCSTIIETGIDIPNVNTIIIENANNFGLAQLH
QLRGRVGRSQHQAYAWLLVPSLKDIKSDAKKRIDAITSIESFGSCFELAN
RDLEIRGIGEILGNNQSGHITKIGFSLYMKLLMNAVRNIKNGYYKPLNDI
INTYPKIELNVSNLLPDSYIKKVNHRLFFYNKIATSNNFLDLEKIRLTLC
KNFGNLPNSGDYLIKIAKIRLISKKIGVKKIKSDVKGGYIEFFEDSKINI
QNLLKEFKKEKNCWKFDTSNRLRFSKNFKNNSERIDWILNMLININN
>bbp341 nusA, N utilization substance protein A
MNKEILAVVEAVSNEKSLPREKIFEALECALAIATKKKYDQEIDVRVKIN
RKNGNFETFRRWLVVNQVLQPTKEITLEAAKFEDVTVKVNDYIEDKMISV
TFDRITTQTAKQVIVQKVREAERAMIVEQFRKYFGKILTGIVKKINRESI
TLDLGNNAEALILKEDMLPRENFRLGDRVRGVLYAIYPESRGAQLFVTRS
KPEMLIELFKIEVPEIGEEIIEIKSAARDPGSRAKIAVKSNDKRVDAVGA
CVGMRGARVQAVSSELCGERIDIVLWDKNSAQFIINSMAPAEVSSIVLDE
DRHTIDIAVDSNNLAQAIGRNGQNVRLASQLSGWEINVMTVDDLKLKHQE
EKDKILNIFTKYLKIDQKISNILIDEGFSSIEELVYIPFNELLNINSITQ
ELAYSIRESAKKALCAIELENKKVINERKLHKDLLNLKGMNQKLAFKLAK
KNIFSLEDLAEQGIDDLIDIENLNSNTAGMLIMAARNICWFGNKTSA
>bbp409 nusB, N utilization substance protein B
MKSKTKTRRKAREYAVQALYSWQISKNDIYDVINHFKKNKTINEIDQIYF
YELIIGITKNLKYLDELMRPYLSRTIQELGQIEKAILRISFFELDKRYDI
PFKVTINESIELAKLFGAKDSHKFINGVLDKASLKLRKNNSNKN
>bbp040 nusG, transcription antitermination protein
MYKSYKKRWYVLQAFSGFEGRIAQSIREHVKLKKMEKLFGEVMVPSEEVI
EIKAGQRKKSEYKFFPGYVLIQMIMNESSWHLVRSIPRVLGFIGGTPDRP
LPITDQEVNTIINKLKQVGDKPRPKTLFEPGETVRVNDGPFSDFNGIVEE
VDYEKNRLKVSVSIFGRSTPVELDFSQVKKN
>bbp538 rho, rranscription termination factor rho
MNLTALKNIPVSELIFLGDNAGLENLARMRKQDIIFSILKQHAKSGEDIF
GDGVLEILQDGFGFLRSSDSSYLAGPDDIYVSPSQIRRFNLRTGDTISGK
IRPPKEGERYFALLKVNKVNYDKPENARSKILFENLTPLHANSRLRMERG
NGSTEDLTARVLDLASPIGRGQRGLIVAPPKAGKTMLLQNIAQSIAYNHP
DCVLMVLLIDERPEEVTEMRRLVKGEVVASTFDEPSSRHVQVSEMVIEKA
KRLVEHKKDVIILLDSITRLARAYNTVVPASGKVLTGGVDANALHRPKRF
FGAARNVEEGGSLTIIATALIDTGSKMDEVIYEEFKGTGNMELPLSRKIA
EKRVFPAIDYNRSGTRKEELLTKSDELQKMWILRKIIHPMSEIDAMEFLI
NKLAMTKTNNEFFDMMKRS
>bbp247 rnb, exoribonuclease II
MLRNHPLLSKLKRKLNSNIPRVEGIVKSTEKGFGFLEIDSKTSYFIPFKN
MKKVMHGDRITALLKIDNSREIAEPEKLIEPFLTRFIGTIQVNKSIISII
PDHPFFKEKIVCSVSCILPKCVKTGDWAVAVLMQHKLIQGHYKFLAKLVK
YIIKKDDVLVPWLVTLSRYQLESDCFKLNSSSIIFDNSLKREDLTHLDFI
TIDNSSTKDIDDALYVEKQSLGAFNLIVAISDPTSYIPFGSSLDNFALKR
SFTNYLPGFTIPMLPSELSENKCSLKVNKSRPVIACKIRIDSDGCILHNY
SYFFLAWIKSKATLVYECVSDWLEHKGKWVPECSNIANQLFMLNSIYNIR
RNWRKNYAVLFKEHPEYNFKLSSNFQVLNVFMEMRRTAHKIVEEAMIAAN
ICAAKVLSEKLGFGIYNVHIGFDASNSENVVRLLSKYGFNFCKDEIRTLK
GFCKLRRILNKHSYKYLDNRIKKYQSFGELQFFPGPHFALGLDAYATWTS
PIRKYSDMVNHRLLKSIITHTHVIKPSCDILLKINDRRKRLKMAERDLED
WLYSKFFSSIEYTKNSFNAEIIDVFRSGIRVRSLKNGANIFIPSSFLHNI
RNELLCHQDQGIVYINDKKMYSVSDIIQVKLINIRTQTRNLIGKPV
>bbp239 rnc, ribonuclease III
MNHTVIQKLQKILGYTFIKKDLLIQALTHRSANSKHNERLEFLGDSILSF
VIANALYHCFPHVNEGDMSRMRATLVRGHTLAKIAYEFDLGDYLQLGQGE
LKSGGFRRESILANTVEALIGSIFLDSNLKTIEKLILKWYKNRLKAINPS
DTQKDPKTRLQEYLQSKHLPLPSYLVEQVYGEAHNQLFTIYCEISGINEK
TIGIGSSRRKAEQEAAQNALIKLGIE
>bbp442 rpoA, DNA-directed RNA polymerase alpha chain
MQSSVTEFLIPRLVNIEQISMTHVKITLEPLERGFGHTLGNALRRILLSS
MPGFAVTEVEIDGILHEYSTKEGVQEDIIEILLNLKGLAIRVYGKDQVYL
TLVKTGIGVVTAADINHGNDVEIINLDHIICTLTCKNASISMRIKVQCGR
GYVPVISRTNVISDNKENYVGKLLVDACYSPVERMIYKVEAARVEKRTDL
DKLVIEMETNGTLDPEEAIRRAATILSNQLESFVYLRDIREPEIKEEKPE
FDPILLRPVDDLELTVRSANCLKAEMIHYIGDLVQKTEVELLRTPNLGKK
SLTEIKDVLAAKNLSLGMNLENWPPDNILDN
>bbp035 rpoB, DNA-directed RNA polymerase beta chain
MVVYSSTEKKRIRKDFGKRPKVLDIPYLLSIQLNSFQKFIKHDPNGIHGL
ESAFRSIFPIRSYNGNSELQYINYKLGQPIFNVKECQTRGMTYSSPLRVK
LRLVIYEKETLDITVKDIKEQEVYMGEIPLMTTNGTFIINGTERVVVSQL
HRSPGVFFDSDKGKTHSSGKVLYNARIIPYRGSWLDFEFDPKDNLFFRID
RRRKLPISIILKALNYNTEQILDTFFKKNIFKFTENSILMKLVPHRLRGE
TASFDICIDNKTYIKKGQRITARHINILKEKKIHTIKVPTEYLIGKISAK
NYFNKKTNEIIVSANTELNINIIKELKNNEYTNIETIFTNDLDHGPYISE
TLNIDPTHDKLSALVEIYRMMRPGEPPTREAAENLFENLFFSEERYDLSS
VGRMKFNRSLQKQNITERGVLNQSDIISVIKKLIDIRNGHGEIDDIDHLG
NRRVRSVGEMAENQFRIGLIRVERAVKDRLSLGDLDMLMPQDMINAKPIS
AAIKEFFGSSQLSQFMDQNNPLSEITHKRRISALGLGGLTRERAGFEVRD
VHPTHYGRVCPIETPEGPNIGLINSLSVYAQTNSYGFLETPYRKIHNGKV
TNEIKYLSAIEEGNFIIAQANTNLDETGAFVEDLITCRYKGESSLFNKNQ
INYMDVSTQQIVSVGASLIPFLEHDDANRALMGANMQRQAVPTLRSEKPL
VGTGMERAVAVDSGVTIIAKRGGIVQYVDASRIIIKVKKNEINSEEAGID
IYNLKKYTRSNQNTCINQIPCISLGENVEKGNVLADGPSTDLGELALGQN
MRVAFMPWNGYNFEDSILISEKVVQEDRFTTIHIQELACISRDTKLGSEE
ITSDIPNVGEAALSKLDESGIVYIGAEVNGGDILVGKVTPKGETQLTPEE
KLLRAIFGEKASDVKDSSLRVPNGVLGTVIDVQIFTRDGVKKDKRALEIE
EMQLKQAKKDLTEEQKVFELGLFTQIKSTLINSGMNIDQLNKIPKSELFK
VKVTNNLYQKKIHKLFLKYEELKKCFNKKLETTRNKITQGDDLAPGVLKI
VKVYLAVKRHIQPGDKMAGRHGNKGVISKINPIEDMPYDQNGLPVDVVLN
PLGVPSRMNIGQILETHLGLASKGLGNIIDTMLKQQKSILNIRKFIQKAF
NLGNNTRQKTNLNNFSDDEILSLAKNFKNGIPISTPVFDGAQESEIKALL
KLADLPSSGQITLFDGRTGEKFERPVTVGYMYMLKLNHLVDDKMHARSTG
SYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVN
GRTKMYKNIVDGNYKMEPGMPESFNVLLKEIRSLAINIELENE
>bbp034 rpoC, DNA-directed RNA polymerase beta' chain
MKDLLKIFKSQIKTDEFDAIKIALASPDMIRSWSFGEVKKPETINYRTFK
PERDGLFCARIFGPVKDYECLCGKYKRLKHRGVICEKCGVEVTQSKVRRE
RMGHIELATPIAHIWFLKSLPSRIGLLLDMPLRDIERVLYFESYVIVNEG
LTNLEKNQILSEEQYLNALEKFGDEFDAKMGAEAIKLLLNSINLKQECNK
LRDELNNSNSETKRKKLTKRIKLLESFIHSNNKPEWMILTVLPILPPDLR
PLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLELSAPDIIVRNEKRMLQ
EAIDALLDNGRRGRAITGSNKRPLKSLADMIKGKQGRFRQNLLGKRVDYS
GRSVITVGPYLRLHQCGLPKKMALELFKPFIYGKLEKKGLATTIKAAKKM
VEREESIVWDILDEVIHEHPVLLNRAPTLHRLGIQAFEPILIEGKAIQLH
PLVCAAYNADFDGDQMAVHVPLTKEAQYEARSLMMSTNNILSPANGEPII
VPSQDVVLGLYYMTRKKINAKGEGMIFKNSKEAEKSYQMGFSELHAEVQV
RITEYKKIDKQNFLKNTKIENTTIGRAILWMIVPKGLPFFMVNKILGKKS
ISKLLNTCYRILGLKSTVNFADQIMYTGFNYAARSGSSVGIDDMEIPKKK
SDIISEAEIEVSEIQEQFQSGLVTAGERYNKVIDIWAAANERVSKAMMKN
LSTESTTNKQGNEEKQISFNSIFMMADSGARGSAAQIRQLAGMRGLMAKP
DGSIIETPITANFREGLNVLQYFISTHGARKGLADTALKTANSGYLTRRL
VDVAQDLVVTEDDCNTHKGIIMTSVIEGGDVKESLREKALGRVTAENIIK
PYSSDILITRNTLLNEKWCNVLEKYSIDSIKVRSVVHCDTNFGVCANCYG
RDLARGNLVNKGEAIGVIAAQSIGEPGTQLTMRTFHIGGAASRAASESSI
QVKNSGIIKLHNAKSVINSEGKIVITSRNVELKILDKFRRTKESYKVPYG
AIIAKMDEELVNSGEIVAKWDPHTIPVISEVNGYIEFVDMIDGQSITRQT
DELTGLTSIVILDTSERTSLGKDLRPALKIVDSNGENVLISGTDMPAQYF
LPGKSIVQVDNSIKISSGDTLARIPQESGGTKDITGGLPRVADLFEARRP
KELAILAEISGFISFGKDTKGKRRLIITPYNNNTPYEEMIPKWRQLNVFE
GERVEKGDVISDGPESPHDILRLRGVQAVTKYIINEVQEVYRLQGVKIND
KHIEVIIRQMLRKATIIKSEHSEFLDGEQVEYSRIKVSNRNLSKIGKKTA
IFSRDLLGITKASLATESFISAASFQETTRVLTESSVAGKKDELRGLKEN
VIVGRLIPAGTGYAYHKKRLKNCQKDKTKEKNKPSSISVEEASANLSELL
NSTL
>bbp052 rpoD, RNA polymerase sigma factor RpoD
MEQNPQSQLKLLVTYGKEQGYLTYSEINDHLSDNIINSDQIEDIIQMIND
MGIQVVEKAPDSDDLILHEIKRNNETDEDIVEATAQVLSTVESELGRTTD
PVRMYMREMGTVELLTREGEIDIAKRIEDGINQVQCSVAEYPEAITHLLE
QYNRVELGELRLSELIHGFVDPNAEAVHTSITNHINTNSEEHHHNDNTEE
NNDDDHLVDPELAREKFIALKNQYHITNYAIKTKNRNHQDTLIEINNLSE
IFKQFRLVPKQFDHLVINMRKMMQKIRIQERNIAKLCIEYGNIPKKALLN
FFSLQKTNQIWSKIVQNIKKPWIDKFNTIKPDIQMILKKLQKVEEETGLT
IHQVKNINKRISLGEAKAKRAKKEMVEANLRLVISIAKKYTNRGLQFLDL
IQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPV
HMIETINKLNRISRQILQEIGREPTPEELSERMLIPEDKIRKVLKIAKEP
ISMETPIGEDDDSHLGDFLEDTNIELPLDSATSASLRSATKNVLSGLTTR
EAKVLRMRFGIDMNTDHTLEEVGKQFDVTRERIRQIEAKALRKLRHPSRS
EILRSFLDD
>bbp027 rpoH, RNA polymerase sigma-32 factor
MIKVETKTLPAISLGNLDSYIREANSWPMLSSQEEKYLSEKLFYHGDLNA
AKTLILSHLRFVIHVSRNYSGYGLLQADLIQEGNIGLMKAVRRFNPKIGV
RLVSFAVHWIKSEIHEYVLRNWRIVKVATTKSQRKLFFNLRKTKQRLGWF
NDHELELVAQELGVKREDVREMESRMSAQDIALHHVPDNFREEQNFSYTI
PYLKDSLSDFANHVEEDNWEAHKTNKLSNALSSLDERSRNIIHARWLDDS
DHKMTLREIAHNYGISAERVRQLEKNAMKKLKVAIET
>bbp491 yqgE, conserved hypothetical protein
MIINFKNHFLIAMPGLKDPLFKNSVIYMCKHDNNGAMGIIINKKIKNLTI
QKILHQLKINIKSSNTLDFKNPVIIGGPILEDRGFILHTFKKKFTTSTHI
SNDLSITTSRDILEYIANLNNPKNILMALGHCIWKQHQLEQEIAKNIWLT
TPADIDIIFNTPISEKWKKSMYSIGIMNILQLTSEIGHA
>bbp348 yrbA, YrbA
MTITNTIKSLLKKKIPLTVIHVTGDNKHINITAVSDIFNNINTLRRQQII
YKPLMPYIINKTLHAISIKTYSLQEWKNK