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# Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130, Fiocruz L1-130

>LIC12016 conserved hypothetical protein
MLRKKRGIKQYDMARALGVSPSYLSKIETGSQDPTEKFKQACVKYLKTTL
EKLFNEEPVEDVYPEFTEGLTNKLWAKRRELGIKQYDMAKKLKVSTPFLS
KVELGLLEPPEDFKNMASKALKMKKEELFLQKVEY
>LIC11110 histidine kinase response regulator hybrid protein
MTPMRILFLDDEEMIRDLFREIFGTIHDLTLIGSAEEALEVCKDKSFDLI
ITDVRLPKMSGIDFISRLRDKEINTPFIVITGNQDIEISIRALRLGAVDF
FIKPFRMDAIRHSLQKFESLFISSQELISKNHFQLTHSKQNFAIKPSLKN
LNQYVNLVMRSISLTPGIHTDDILSIKLALYELLGNAIEHGFAGISYEHK
ASLLSSDVDYVDHVDKICADINECVLLEIGFEDQKVYVSLKDRGAGFDPS
KVPDPVTDPNASYLSGRGIFLARMNVDELVYNDIGNEVSFSKTLKRANSK
VNAS
>LIC12472 acetyltransferase
MFIDLNIHSFECSEFNFELELVEIRRVYTCEELSEFAKINAMSWDPIDVN
VLDFYEQNQELFLEENCPLRFYLGFADGIPIVTCEASYDKDTVGFYNICT
RQEFRKRGYASHILKCAL
>LIC12792 conserved hypothetical protein
MLLVVDVGNTNTVFGIFENGNKIPLFHKRTVTRKDRTSDELGLFFRGFLR
EFKIENEMITGGIYSSVVPTLNPILDRMFQDWFKIEAIRVHYQMKLPFSI
SYPRPYEIGADRLVNAATCAIDFPGKSIIIDLGTATTFCVVNEKPEYLGG
VIAPGLKVSMDALTRNTSQLPPIVFQSPGKILGDSTIESIQAGFFFGWIG
LLEGIIREIKKDKGQDYQVIGTGGLVTVIDAAHPGIFDKIDPLLTLRGLQ
ILHLMNS
>LIC13047 conserved hypothetical protein
MFKSLHSREAKIFCKNLIAARKNSKLTQLEVAKRLGEPQSYISKIESGER
RLDVIEFWRIFKILGKSIEFYFQFDEKQDGSEKKSKTLKVASNKRKKK
>LIC11283 conserved hypothetical protein
MTSRFTVAIHILSLLSLGEGKTKTSEELAESVNTNPVVIRKILSLLKNQG
IVRNQMGPNGGYVLAKTPASINLKEIYEAIDEKIFQMHSKSPNKKCICGH
AIQPILSKVYEKAQKVLEEELGSTDLDSITKEILNFSKK
>LIC12490 RNA polymerase ECF-type sigma factor
MDSSTKKEQKQIVPKKPTLREIEIGLLKKIKEGDDEAYIQLVSLFRERLY
RKAISMVKDGDDAEDIVQDALISGYRSIRNFRADSGVYTWLYRIVVNKSK
DMLAKRKRAKENSMDDKEYQVTDDRLGFEKKIELSDESNYLISKINGLED
LYKEVIELRYFEEMSYAQIAEVLGTNVGTVKSRLFKAKEFLKHLILQDGK
GEGYFR
>LIC11848 conserved hypothetical protein
MKLQKLFLAVLIAISTAVFSQQNSGSDQKSQPSSAQLGQSILETERKLDE
KIFELNQRLTRHTVLMKMKVRVLPFRTVLFKGKANNDECTPAINQEDPAN
NCIRVEVYDFIRDEERGLNKNVQGALAKYMEIYFEGQNSNDPEPRTEPPR
NINKLKSKIYKNNMVLEDKIISEVMDRGPNTQPSHNDKVEVFFQKDNYPE
YGRPETPAEKGVGKYILAGVENTKTHPIRNSFKKEFYIKHLDQFDRLFTK
IFDYNDQLGNENYKENVDALKDSLRY
>LIC11380 RNA polymerase sigma-28 factor
MSKKYEKYNQQDETELWKSYRETKDQDIRSYLVEKYSPLVKHVAGRIAIG
MPQNVEFDDLVSYGVFGLLDAIEKFDPERLIKFKTYAMTRIRGSIFDELR
SIDWIPRSIRQKAKQLEQIIGMLENKEGQQVDDDAIAKELGISMEEYNSL
LTKISGTSLVSLNDIWFLGDENDEVSFMETLESPMNMNPDTIIEKEEIKN
VIVEAIKTLPEKEKKVIVLYYYEDLTLKEIGEVLEVTESRISQLHTRAVS
RLRSKLGKVKSVISRK
>LIC12654 transcriptional repressor (LexA family)
MNRQRSRRNELHPTQKKLLELLKRWKDEPRTIRELMEALDLKYPNLVYHH
IEQLENKGYLKRNPNNPKDYEIVSDPEESNIVYLNRYGEAQCGPNGTILD
GDPVERIPLSRKMLPFSSSDGFIVKARGNSMIPRIKDGDLVIAKKASDAN
DKALIVCVQNGKVLIKQLRKSETGILLLSLNDEFDPITINPDKDDFKIEG
EVKLILSYT
>LIC20104 DNA binding protein
MGFSKTFSREFILMFSANNLYDVISSLFSEMNLFYAHAAGVGTGIVMAIT
KLYTGRKDEFSKAYGTILLSVSIFLMANNRVIFPQQTDPRLLKDSLFLGI
YFGLVLYASAAVLVCMMFILDRLQNPWYYCKRLTAIIPLALTAAFFLPGT
IYICFCDSVAILITLYTSGWSIYKIRSSQKSNVFFNFPFITLAITSSLIL
DLTGTVIQSTKMLMFSELIPGFMIAYTTLIERFFPILFSKAYGESNKVLM
DQELTDFSDDDLLESEEEIQSESTRNILEGVELEKIEERINSFLQVRGYA
DEELRLPDFASYLGLSTHQASYYLNKHMSMKFADFLNMNRIEDVKRNLRN
KSHMNLLQIALECGFNSASSFHRACVKFTGKSPREFRKLINSDN
>LIC11482 conserved hypothetical protein
MASDLSFVDFIVDQVKDAGQIVSKKMFGEYAIYCNGKIVALVCDNRLFIK
PTEGGRKWIGNVQEASAYPGAKPSFLILDRLEDKEWMSHLVKITVQELPE
PKIKSKKKNVSSQKKVRINKK
>LIC10666 transcriptional regulator (ArsR family)
MVQQETDSLSLTFAALADPTRRKILATLRYGEVTVKQLAEPFAISLPAIT
KHLKVLEKAGLISRGREAQWRPSRLEAGPLKEAADWIDEYRQMWEARLDR
LDEYLRELQQKESQQKRKTDHESGKN
>LIC20178 DNA binding protein
MKIQYSNPIILKSLSFMNAYIENFLNRIYNSKILSNFEHKISLKSFLQKW
FEKNIFSTFLIFFGLYLIIWNRTIPEILTPGDLYKFKLISIICGISIYSF
LLLRLIILGIFEIQISYRYILRNAITAMILSFAFLMYFEKPFSMMITGEL
FCLGICIYTLLESGYLIFSRPYKKEYYFLFPILGGIGFGVLGNFIGTAFY
NVEWNSISYYFYAFFIFTLYLLKRKIKAQNEATTSQNLVLSLNSETQEII
EQPYSMLEDEILEFIEPLEEKNLLKEDDLKRAEERINGFIREKLYADDSI
RLIDLSAYLGVSLHQASFYLNKYKNMGFSDFINQNRMNDAIQFLVEKKNM
NLLDIAFECGFNSYTSFHRACKKWTGCSPKGLRKNAIQLNGSNYEHFKIS
INLQKAEILNKNLESNKFDTVVV
>LIC20254 response regulator
MVMKTILVIEDDPDIGNLIRKSLDSAHYSTTLQTSGEEGLKFYKANHPDM
VILDLSLPDIDGIEVCRTVRRNDENTPIFIVTARNEEIDRIMGLELGADD
YITKPFSVRELKTRVDVFFRRWDKKAGIKPNVGASGEIIRGALKIDPVRR
RVTLKDNIVNISRKEFDILQLMAASPGKVFSREMILEAVWGMEWDGFERM
IDSHVKRIRSKLEKNSAQPEWIETIWGIGYRFTDNYDNIVIPD
>LIC13024 conserved hypothetical protein
MQKEFTFYKNYREKEKLREAFFQFTPKALYGADFRLWYQLGFWENSYIPY
SFFKDEIIVSNASVCEMKIILNGQEFDAVQLATVGTLPEYQHQGLSRKLI
EHILEDYKSKTSFFFYLETKTY
>LIC13088 response regulator
MKPTDTKIFLVDDHAILREGLKMILSGQPGFEICGESGDAEKALDQIGKL
NPDLVITDISMPGLSGIDLVKNLRKYYPNIRTIILSRHDNKEYVQKLLEL
GINGYVLKDDAGNDLLRAIEAVHKGETYLSPGITTHFLSGFVGSGKPGED
NQDAKKAFSVLSDREREILKLVAEGNSNESIGKILRISPATVKVHRANIM
KKLDLHKVADLVMYAIRAGLIES
>LIC13292 conserved hypothetical protein
MKFWFPQERRFYFFSMYIFLILLWIIEEVLTFAFDINWIERSQAYFTTIE
AAFGLLSIIGIYFLFQEIRNTKTDIESAKIMIEGLKNKNQFLVQTNQSFW
ESLQRQLEEWDLSDKEKEIALLLLRGMSNHQIAAIRGKSLKTIENQTFSI
YQKSGTTGKLEFIAYFISPLLPEED
>LIC12206 transcriptional regulator (MarR family)
MDDALRHKLLRILEENPEVNQREISEILGISLGKVNYCLKALMDKGWIKA
RNFKNSKHKLAYAYFLTPSGIEEKARITVRYLKLKMQEYEEIQKEIEELK
KEIGEQ
>LIC11817 RNA polymerase ECF-type sigma factor
MSAKKEIWEECSTLIRKTREGDQISFEKFLRLVTGILRSYLSPRISNEED
REDLIQEILIGLYKAWDSYREDRHPAPWIFAIARYKTIDYLRKKKSGDRV
FATDNLEFFASPEPIEEEPEKAREILKKWLDVLDERQKQILTHLKLDGMS
VREVSEKTGLSESNVKVITHRAVQKIRKHFSLDL
>LIC20082 transcriptional regulator (ArsR family)
MRISRYLDILSLVEQLLEAKIHSGNGPKQILSALKALSDETRIRILHILS
LSPLNVQEITEVLRMGQSRVSRHLKILTDAGFLIPEREGSWVYYRIPEEK
KEPDFVSEITELLLSYKDDLPFRTPDQLQISEILSRRDQRNTFYFNNVAQ
DWESIQKDVLDPAIYRKKILSYLPDSSSVIYDLGCGPGGLIPYLLTKSDQ
VIGVDSSPKMVEEAQVAFAGNSHVSLIHSQLENVASSATWSADAVVASMV
LHHLSNPPAVIREIYKILKPGGVFCLVDLKKHNQEFMRDNFSDLWLGFDY
SLLQDWLELSGFTITAHEEFDTDNVFKILIIQATKKED
>LIC13025 conserved hypothetical protein
MNVNSEKDRILFRKITSSAKSTTNRFGVIQYEFILSFYWIYVYPENFYYF
PENDSILVLHLDKKVLWIYDILCRDSFSISKFLLDWNLEDIEEIRFGFCP
DRFDLLNLEIKNDIITQTDSPLFVKGFQSALKSTFLFPMLARA
>LIC11617 transcriptional regulator (ArsR family)
MSKEKSALKKNQLESAIRGIKGIAHPDRLQILFFLSQKEHSVGELVDLLG
ISQSAASQHLSKMKINGILSSRKESNQVFYYLKDGKYKDLIRTIVKIYG
>LIC10013 sigma 54 activator
MNSEEHIFIGNASNSIKIFNRLKSLSQSNLPLFVTGGPGSGKTFVSNLIA
SLSGTNPQIFIIDSDHHENQRSLESALSVKDNVYFLFKDFPNFPKENQAY
LLKRIRENQNNSRFVFISGKEWKQKLEAGQILESLYFEISNFRLDLPDLR
ERKEDIPLLIKHFLEILSDKYKRKEIRLSEKLYHILLNYDFPGNIRQLRN
LLESMISLFAVRILDVKHLPPQMFETSYVYSEFIEVKTGIPLRDYEREII
KKNLILVNGNREKAAKILGISERTIYRKIIEFGLSDEVEGKNLPSDV
>LIC13039 transcriptional regulator (MarR family)
MGTHYKGNSRETAVLNAFIKLSRCSDSIRQLEEKVFSKYGLTTGQFGCLE
TLLHLGPMCQKEIGQKLFSCEGNITQIVDNLEKRKLVQRVRSEEDRRYII
IHLTSEGKKLIQKAFPDLLNSLVHKFGNLSENQLLDLGDFCKEIGLKTI
>LIC10378 transcriptional regulator (PadR family)
MMTKEESIETKGITPAMFHILLSLAEGPQHGYGIGKSVEISSEGNFHLGP
GTLYRTLELIRGFGWVRYSKKKVMENDDPRRLYYEITSDGKEILVYELKK
METTLKRAKKLKLLGN
>LIC12452 conserved hypothetical protein
MERDRTAIKGLIEALLFVSGEPLKLASIAKSAEIEKTEAREILDELILDY
SEKNGGFLLKEIAGAYQFVTNEGFAELLGNIFKEKRREQLSKSSLDTLAI
IAYKQPITLPEIDEIRGVSSRAMVTSLISKKLIKPVGNKEVPGRPALYGT
TKEFLIHFGLNKLSDLPAPVEVKELKFENLDDLLEDE
>LIC10386 RNA polymerase ECF-type sigma factor
MAHTSELEKLYNHNKDDLFHYIRKSFYDENSAQDILHDSFLNFFKYYENR
DIPDPTSCRMILFRIARNLIINHSKSYYQRNVSLVGEDAGSSFTSKSPSP
EFSVMEKIDQLDVKNIIDSLLDTISTEYKEALLLRYQQDLKLDEISKILG
MSISGVSRLIERAEKALAQEGKKIGFQPADYI
>LIC20105 DNA binding protein
MMNILDSILNQEILLSLIRFGAGFALVLGIGNWIRARKQIDYLVSSVLIF
TAIFQFIDESVLNTIPQTWLRKLLFLIDIVALAASGTLIFLISTMSFKRY
SKLPLIYYWNLIGPLILSLPIATFYEQQGSKELEFFLFAADLYVFVYFVI
AVANIFIDKKYESSAMSFKTILSLVILISLCIPLEILGIVFENKSLILLS
SVHTTFTVIFYYFLTLIRPNLLDIISSESGKSFVKRSLLHDVDISALEKK
LIHIIKEERIYLDEDIRLPDVSEELGISVHQLSFFLNNHLGMNFNNYINR
FRVEEAKSMLINDPSRSVVSVGIAVGFNSNSSFYKAFLKETGMSPKQFRE
TQTKVIHFQSSSADIQFRN
>LIC20029 conserved hypothetical protein
MAAIAFLCVSLFLSFYFLKNTEYIPKDAIAVSNHFLRLLITKKLKEAYSL
TNENAIVGTSYERFQKKVDQELGNGDGMGNCDLSIKSYGPKQTYGNRLKR
YWNQDTVEVDPLYVEYYPCGLPFQIVLHLNRNGEWKIVNFQSHAD
>LIC10332 response regulator
MKEKVLNLLIVEDNERLRKSLIEGMKEFAKLKISYDCAKGEEAIDFALKN
EFDVLLADVRLAGTLSGIETIVAIRKEYPRKPVVIYSIQDSDEYFRAFRK
AGILSHYAYVRKSNYLLPQMIVPLIELAYEGKSFIDPEIETRIVEVKDQD
ENSPMAILEPNEKIVAKMLGEGLSNEQIAARLGFKDKRTISRINGQIYAA
WDLNESNSDEKVARTRAALIVRENRFLQWEEDGNVYYRNGSGDWIRWESN
LEL
>LIC12619 conserved hypothetical protein
MAGKITHLEVLSQICKHLDHGTADQRKIAVLMRAESNRKFANIGAIAPDI
FYFYHIFSPHKTKKATRWGDMSHHNSVAELVLSFLDLILQTEEGIHRDRY
IAFTLGYICHCVVDIVTHPYIFYISGDFYNKDKKISSLAQYNHMRVENAL
DSWLLDYRWGMTPKEYDFVHHVDAIFKSEKKIWKMDPMLWHFWLRGLKST
FSEEFKKYYIGSEDKIIPGDLLNESFLGYLEFHKLMDSRSRWVRGTLKFL
DQITFHKVRSSVLMLPLKEHIDKRIMNEEKKKWNYPADPSIVREDSFVEL
INSSAQNGKEALTHAWNYLENKMSRSAFLKEYQGYNLDTGLRFQGVDSMK
EFSPLEEV
>LIC10598 conserved hypothetical protein
MIILVMISSPWQAGDGLRAYQGKIDLRGIQDPDFGMTKLNGEWEFSWLQG
PEKGIENHSVEFIGVPGSWTNESKSNQTYPKFGYGIYRLKVFLPEIWKKK
ILSVSLGAIASAYRIKINEQIIGECGTPGIDPDSIVSRIEPRDFLFFADE
DEVQIEIFVSNYTSTMPGILLPISIGPSDSAGVSKAIPLFFDIFSFSSLL
IMGIYHIFQYLYLRSSVSPLYFGMYSLVICLRTSLINSKILMLFFPQIPW
SWVHKINHLTLSVGVPFFLLFFSSIFAPYVSRKFINVGVVFSILFSIVTL
FGDMTFNNQSISIYHYFIIIIICYLFYTILKIDFDKERNYTYILYGSGIL
FIAVLVDLFYARVLKTGSIQTSHYALVFFVFLQSLLLASERSRKFAETRE
LALNLRTSNLELFEMKEQLVQKIEDRTRVLNDNIIQINRELEIAQNVQRK
ILTPLDRNIPGIRFYYEYKPLEKVGGDFLDISEISSGKTRVLIADAVGHG
VQASLMTMALKTEYEELKNLENPAQVLKELNFRFLKKFDSLESIFPCMIG
DIDTEKEEFTYASAGHPDQILQLPGEFPSLLQKTGPILGLFESLEIVSKT
IIFPTGSRLLLFSDGLIENRMKDSLNTKQHNMELITKTLHEGRESELKNL
IQEIIKIEELTRGENPRYDDITVIAVEFYSVKRS
>LIC10975 transcriptional regulator (AraC family)
MDFFPDLNFLDYLIFVKEVLNRYLEYLYSASIVISFLTGLSGFYKATKNR
LNFVRGIFLMSACFLIIGHSKAFSLMTSDPNGILSLEKRVFFSYYYGFAV
CASLSSTFYVMYLFGALKNPLRLSLYSFLSFPTIFLISLMIENLISIVYF
GKSVLFTLQFSAGIFNLYYVIKYKMKKIYFNYPIQNFTLCTALIVHSIGM
WLGTPNLMILALSFTGFFIIYFFILEYNHPEFWKVSFSSELIEIKSEDNK
IQTLQTNTSPKNLVERLDISRIEEKIQKFVEDREYLDEEIRLSDFSAYIG
LSLHQASYYLNNYKDLSFTDFLSFHRLEEAKRMIEQRPDINLLEVALASG
FNSPSSFRRACLKFTGKPPKEFRNYVLHQTTPSITLELQNQLG
>LIC11353 ParB family protein
MKIRVSDIKVKNRIRKDLGDLQPLKESIQKLGLLHPILIDLENTLISGER
RLESVKILGWEYVDVRIVDIRNKKERVQMEAEENNIRLEFTSEEQERVRE
LLKRYSYTTVFGRIFAWILDLLDWLKRFFQKK
>LIC12825 conserved hypothetical protein
MMKNKNVIIKPVDKNNWRDFETLFESKGGPHYCWCMAWRMTGEERKNNTT
ENRKKFIKQRVESKISIGILGYLNEEAIAWCSVAPRETYRSLGGDENLES
VWSIVCFFVKKEYQGRGVATTIIENAKDYAKKNGAKYLEAYPVEKNSPSY
KFMGFTSMFKKIGFTFVKKAGTRRNVMTYKL
>LIC11684 transcriptional regulator (Sir2 family)
MKEFITKHRDKFQKISAISGAGISAESGIPTFRGSEGLWKNFRAEDLATP
QAFSKNPKLVWEWYLWRRNIIETKRPNPGHFALVELERIHPDFFLITQNV
DGLHSQAGSKKLTEIHGNIFINRCISCGQESKETISENTTPLPPQCQNCN
SFLRPGVVWFGESYDDFKLNFSIQRMKHTDLLLVLGTSGSVSMPVYLAQI
AKDSGALLVEINPERSSFSSSVDLFLQGKTGEVLPELIREILDNPS
>LIC12616 conserved hypothetical protein
MNFEYIESIMNKMISEVVGMGQSIPLILADQAVLPSSCPYGTYKVIQLVQ
DPISNASRSIQKLDPTNFKEIIRINQSVLINITFLHDSSIAVCWELSEKS
MDWFDSKEGTIECDKFGITPVLISPNIQDKTVLTESGIYIYKVSFDVLLK
LRKYNEQPGESTASAPTVEYQEEA
>LIC13285 RNA polymerase ECF-type sigma factor
MEQKEFTELIDSTKHIVLSAIKKNLFEEFHDSIDDVVQETYFRAYKSLSA
NKFRGDSSVSTWLYTIARNESLRMNQKRSRQTALASKLKEKVIFDNNSNQ
EKESISFTDFELKDLLAMLPWKYKSVLSLVGEGYKEQQIAEKLSIPEGTV
KSRVFRGKQMLKKNLIDKQ
>LIC12798 transcriptional regulator (TetR family)
MKTQPRKKKESGTGVRERILDTATSLFYKQGFSSTGMRQIIQESNSVAAS
LYDHYPSKKELGLAYLARQEEKTLSDLQSLMDRYPDLGEFLRAWVILKEK
QIRHGEFVGCPFAGFASQVMDSDPEYTEFLKDIVNKWIRMISDYLQKAIG
SGQLKRNMDIQYVARRILMAYHGSITMWRMTQELRFIREMDDSLREIVEE
YRIL
>LIC10559 RNA polymerase ECF-type sigma factor
MMTESEFAEIVNSTRNTVLSAIEKNLAERFYYAIDDVAQETYFRAYKALK
KNQFRQESKLSTWLYTIARNESLRMNDKLRKEEARAEKLINSKKEEDFLE
VKSNLNENSERNSQEVIGLLRSLLIKIPNKYRKVLEFYLAGYSEKQISET
MGVKPGTVKSRAARGKEMMKRVGAKEKFYEE
>LIC11584 transcriptional regulator (TetR family)
MQKIAHTKQEMITAARKLIQAKGVASTGLMEIVAAAETSRGSIYHHFPGG
KDELICLAIEEAAILAELGILRAGKKGKNAAEVIQKIASLFRQVPENSKW
QVGCPVAATAIEGHSQSKIVRDAVANAFSRWSKAIEFTLSEAGLKPEDAK
SIGIGIVAALEGGLLLARGLSSSKPYDTIIDLIIAGVATKDKNPPKNKQS
>LIC12666 acetyltransferase
MRLPASPRYLEMHVHVRKARSDDQIQLFPLVSDFATSFLPDPSAFAKAFV
QILQQDDAALLVAVHDSHLVGYCLAFDHFTFYANGRVTWIEEIMVQPALR
RKGIGHMLMKEAEAWATTRSSKLVALATRRASEFYARISYAESAIYFRKI
LE
>LIC10568 conserved hypothetical protein
MQAKVVEITENYVNLLKTLSNLMGTSIINYKSFDFYSNPASNWFTRIVLK
ENLQSEDLLLEIEDLRLKGFDPYILDFLNTRAHEVFIYELGYNSCDEQIG
MFLEGDAISFNKKLNTNLNIQKIELEKDLKIWLKILNDSFESEDRLSLYS
KLLNIESFRLYGGFVNGQMTTTGMTFYDGESFGLYSITTDRNYRGLGYAS
NIVEHILGEIREVFSGFIILHATQAGKKIYEKFGFENSILLRHWGKL
>LIC10521 conserved hypothetical protein
MEENYSGKILISNSSIVMDYFNRTVILMVEHDNQGAFGLVLNKRQEASIG
EVIQGIPDHVSRNLLIYSGGPVDPTFISVLHEDNKISQPGIEIIPGLYLA
RSFDTLLELLKSSSKFHVFQGYSGWGAGQLETEMNRKSWVIHEASKDFVL
NQDPETTWQEALRSKGGIYKYFVEHTKDPMLN
>LIC12189 conserved hypothetical protein
MINYNLQTKVSEEVYHSTQNFLGIQKGDIQELIEIAKGTKRQRARICSHL
NGNELLQEMFIVHPKGVYVRPHKHIEKPESMMILEGEVDFVTFNDNGEIE
NTMSMGAYHTGKIFYDSMRSSTYHTLMIRSEWLVFLEITKGPFRKEDTIF
APWSPEENDAEKVREFMNKIEQRLK
>LIC10041 transcription activator or transcription antitermination factor
MIENSDVNEWYVLYTNPRSEKKLKRLFQERKIECFLPLISKKKKWSDRWK
VIEEPMYPSYIFVKISFFKDRVRILQLPGAHHFVFYLGKPYIIPEEDLDL
VRTFLETYPDKIQVEIQEKLLPGKKVLIQEGPFAGFKAEIIQRKNEEQIV
VKFPGMNLVTSVTLDIKTLKLEETLGSNF
>LIC12368 conserved hypothetical protein
MTDWFCRLEWNWDGASLESKESSKKKSGWLLYIAAGILLFSALIFLISKF
NRTGLEEKIAAGKPIYFLFHAVNDSQEYEFGLLATLFPSNNRCALYFIHP
ITSFDDPDDSLDLLKSGAKSSVKSAITDLIDTKPNYTISISSSQWIRIVD
LLGGLDVYTDNKTVRSSSEYNREPGVYTMSGQDVYDYTSKIDKKETLDYL
ERISRQESVVLTLYEALSQKKEFLTTPLLIFAHSLIESDLSKEDFVSLIK
FVNSRRIQFGISELPGEPMNDPKTKKLYLKTDIARARIAFRKFSKDMNSD
VFTDAEFARTEVLNGTEVAGLAKDVRGILSDKRIKVLAADNAWKKGFPKT
VVIDRSGNTAIMDRISTVLEKAEVHHVLRKDLGLDATVVVGSDYEPRK
>LIC13214 putative cytochrome oxidase subunit
MELFLNYALYVIVSIGFLIPFTGFVIGAGTIIKATLVGFAVNFSSQVLEE
NKLQDFIERNKDNKLGKFLQEVVLKGQEKLKSSPTKEAHKEESHGSHHVI
SVKTYSLIFATLIFFTFVTVWVAGIDFGAMNVIIAMAVATAKASLVLGYF
MHLKYDTLMNRVIFGSGFFFLLLLFGFSAADIFTRFKVLLSFAF
>LIC20115 RNA polymerase ECF-type sigma factor
MATRKDFMDALYREYSGKIFDFLYKYSSGNPEIAMDLMQDTFLNFFRKYS
DTDIDQEQAIRLLYTIARNRSINYSRKFSTVKESGNSEMQEFQEQKLSFV
RKAELKDLEERLLVCLDELEEDEKYALILRFMEDYNLTTIAEIMNISVST
ASRLIVKATAKVTEIAEKKNLKP
>LIC11231 transcriptional regulator (TetR family)
MAKDTRDLILKTSLKLFSEQGYHGTTMRQVASKAGISLGLAYRYFDSKEA
ILEGIIESHDKILKRYIPDEIVTNPRREDLIVNVSESLISLVKENEDYLR
LYWNLMLQPKIHRLKRRNIHLVNMIFFETSKKTIRSVKPNYSEFEIKNLA
STTIGYMINYLTNKKEFSLDDFRNYLLFTLKNT
>LIC20275 ParB
MSSKSKRLGSLADVFQAEKLEGTVRKIRLDKILPSENQPRQDRKKGVDDL
ARSLEKDGLLQPIIVTKQNPEDENYRIVAGERRYHAAKQLDWTEVECKIL
DRDEKETFRLAIIENLQRENLSPYEEIEAMSHLKTSFKYTDQELGTLFGK
SRSYMTELLGISSLSKEELRSCKEAGIEGKNLLIQAVAASRKGTFFEFLN
LFQTGALKTVKDAKSFNREEENLFTPKIATNTNSKTSNSKLTEYKITKKQ
GLIQITSHDEALLGEILKLIKKEIRKKFGDT
>LIC12757 RNA polymerase ECF-type sigma factor
MSQNSESQIFDFDGLYSRNYEKIYRFLLSKGASKEEAEEICQETFIKVLR
HWEKFDPSKGNETSWMLTIAKNQFLDMIKKKDTVEKRELGDSQKVLEIIS
KKETEYEEDRYQLDLLNASVESLPQLEKNIIVLRFLRKYTIKETADKLGI
SVRTVNRKTFATLTVLRKKLEALNFDFESI
>LIC10275 conserved hypothetical protein
MGSMFFKDSNFTKKNFLKNLFLVREPEIEFLKSSEQTKINISRKISEEEW
ESFFNRLTTARIEANLTQAQVAKSLGKYQSYISKIESGEKKIVYGRFCQI
IQTL
>LIC20111 sigma factor regulatory protein
MTMKKSLRLQIIVIYTILTVVNLTFVAVMIFENQTDLLISNFTLESDRVA
REILKKIESYGNINFENSSQTDEFQTKLLSIGLTNFSVIAAEDNSLEKTR
TLLSNGATATISDLKTKLTNMSNAKAALNTSYDIELDTDHFIVNLIFYLN
PKTFLISQIKMKEMVDRLKSLYIQLGLLLIWGFAFHILFGIFLYRKIFVR
LFLLKEVSETMATGNLNARISWNASAHDELDVLGNTFNGMAEQISSQFDT
LKLKNAQIQTELEIGKNVQECFLPEKRKTFNLINVEIIYQPMREVSGDIY
DIIEISDTRTAFFLADATGHGVSAALITSIIHYNVENIMKETVNPAHIFN
RLSDNLFETLQGTFFATGIFILFEKEGGYAYFCSAGHNPIYYYRKEQNKI
VVLESTGFVLGIGIPDEYSVLKIKTSPGDKILVYTDGVLDAANEKTTEPF
GDDRLLSAFQKYATLPTTELTEKLREEIHSYANVFPDDVTFGILEIT
>LIC12807 response regulator
MVLQKISTTTKSNYSVSIVEDNPHTALNLQELLSKSNEFKFLEHYPNSHK
AIEKIPLNIPDIVILDIGLPEKSGLECLKELKEKTPNTKYVIFTVFEDEE
KIVEAIQEGASGYLLKDTSPELFLAELKVIVLGGAPLTPRIADKIIRKFT
KKEESKNQPIQNTLGLTKRKLQILNFIALGMTVSDIADELDISSHTVSRH
IEKIYKKMEVHSKSEAIIRGRRMGIIQDIPGYP
>LIC11012 guanosine polyphosphate pyrophosphohydrolases/synthetases
MGFVKAPVTKDILLEGVCQKLGDHAYESVQKAYDVSERAHQGQFRLSGEP
YIVHPLQVGFILYELGLDEKVICAGLLHDVIEDTEYSREDMIRDFGEDIT
DLVEGVTKISKIKSQSKETEAAENIRKIIVATIKDIRVILIKLADKTHNL
RTLSFQPPEKQRRIAQETLSLYAPIAGRLGIYKIKSELEDLAFQILNPDE
YQEVKKNINSKKSEREGFIETLKIILLQRLSEIQIEADVDGRAKHFYSIY
RKMKLKEKTFNEIFDLRAIRIITNEVKDCYGVLGIVHTLWNPVPGRFKDY
IATPKTNMYQSLHTTVIGPDGKPLEVQIRTRDMNDIAEYGIAAHWIYKEG
KPSASEKNVKVKWLELLSSWQDSALDPKEFVEELKYDLHEDEVFVFTPKG
EILQLPKGATILDFAFRIHTDVGLKAKGGRINGRMLPLRTELRSGDQIEI
ITDKRTKPSPIWLRIVRTPSARQKLRSYFKKLREENKKDLQQEAEFAAEI
TLNVDVLEELKKKPSSKPTKQIDLAAGKVIVAGLRGIPVRLSGCCSPLPG
DGIIGFVTRGRGVSIHKKGCVTAKQQEQEESMRVITVEWDYGQSESIPVL
IEVKSKDRQGIFMEIVKSISNTQTNIRESKASTDQRGNLVASFEVDVEHL
DQLKEILSNLKQIPDVYQAHRIKN
>LIC10279 conserved hypothetical protein
MEPFKPKPLLNKSELRQIKKSRTRVEGKKVITDDVKKLKSLNVTPDLPKK
ELVDYYKEPIWIEYYIPRESRFAYEVKYLFIKLIDPKPEPKDVILQEAIS
KEEFIDVLDVMFRYPEKENLIRSSYVNTFSFLESISANYKQFLKTKDVYD
LRVPLFHTEALMKWEPTVATLEFLGPYTIYNLNWLIRKLNEMEEEFSLED
ETISLLIKRRNEYWEENSLPIDEDFELFAALFYEQAFPHRGSEFEDNLLF
KDTNKE
>LIC12257 conserved hypothetical protein
MPKSKTNSKKFQIANLLPEHREASIELVNQFFRLINSLQLDGIFKIRPRA
GTKMIDVYLKLKGTGKVLLLGGFLGDELVSLLIARTEDKPYLEEQKTLFI
DLAVTKRGKQKSGYMKPLVLACESWAKDQEFKSIELRAIVENENAVSFWK
AMGYDPFYIRFRKSFKMDSI
>LIC13150 ATP-dependent DNA helicase protein
MKNSVSKTETQSNGLLLPVTVIKGVGPSKAAALASIGIDTLQDLLNFFPR
RYLDRNLTDNVLLKTGETVTLIVEVIDAYLAHGKKSRLVVGTKTRNNERI
SIVFFRGVNFFQKIFQPGTTLVATGKLEYFRGFQLIHPDYEILTSAIKTT
YPISSTGSKKKKQEQEPEEELSELPEMIHAGRIIPLYPSGEVLKSEGLDS
RGFRKILYSALEKLKGKIPEILPNEIVKRRGLILREESYREIHFPTDENS
LDTAKYRLKYEELFYFNLLIEHKKKEREKIKRVLWPLPESETANKVRKNL
PFQLTEDQNSALQKIKELTNKEQPIAVLLQGDVGSGKTLVALLTALRYID
NQIQVCMVAPTEILARQHYQTILSFLGNMPFLGIELLVGKEPKKNRYEKL
YRIKKGDTLFVIGTHSVFQEDVYFSELGLVIIDEQHKFGVDQRETLRSKG
KNPDILAMTATPIPRTLCLTLYGDLDLLTIKSKPKGRMPIQTKWFQEDRR
EGIYKSIRKYVSSGRQCYIVYPLVEESEKVDLKSCIEAYEYLKHEIFPDF
EVGLVHGKMEVEEKDRVMREFSKNRIQILVSTTVIEVGIDVPNSTVMVIE
HADRFGISQLHQLRGRVGRGDQESFCILMTDSKVTEDAKVRLEAMVNFSD
GFALSEIDLQLRGPGELMGVRQSGLPDFKIADLRKDSNLIELTREDATLF
GNPGDLEKEEIRGRFSEGRLLFSN
>LIC10425 conserved hypothetical protein
MNPSTVRLNFKLNLIRHLRDGKRMTLEELASVTGINNQKDLKEQLGELFF
LGATPHVADLIQVDYDSETDTFGLILPFRFDSSLRLSIREWLTLRKILEE
VVEASSDPKTNSTARKILQKIISIVPIAGQEALSVYKTNIQNAIQNEKSL
ILEYQSRMGEKSTLRKVDPWFLFHSLEDYLLGYCHERKAPRNFRLDNILS
LKIGSDPILQPAGQKKSDYIREFEEFRKSWENSSGIAEIWHTREVFYNLN
RKLDLERTEKTQKLDNVVYHLSKAKIREENWFLETILPFGKNVILERPTH
LAKRILRELESILH
>LIC12046 hypothetical protein
MNSVNFEKTILELRKIAKRNTRDKSKKQFDEELFEGQFFNYIKEKKIDSN
SLYNIASSLMQGKDNFDKDMAIFIISFSDFPQNLISNFLEKNLTSMNEEQ
TSSGMFLINKYQLKDLYYPLVNHLKLNLFFNSESFKERLTYSGILFDKEE
GYKEFQKALEKDLLDENKDYESILKYTGNILSSFLFNKNYEKIQAIFQRY
SDQKTKDFLEQQAFLAVKRWNAGFKEKFMIKKAIIIAQIKNLVKLT
>LIC12438 transcriptional regulator
MTKSIFKVVIKRAFITYFSKFIKKDLYLKIESTLSMANKIITIPLENIDF
SSPGKRLRYAIKNILAMNDEDFATSIGKSQNYISYICNDKRPLLDKLAAD
IETTHGISGLWLIKGQGSPEVNSSLNENSGTVKKMKKRDYLWNKISNDKA
EDILISFYDDIPNETRSLIYQMIVAVSKNSRYS
>LIC10214 transcriptional regulator (CarD family)
MCYFLKQSFNGSYHTYLAAKKKNSEIEHKVGDYVVYPIHGVGEILEISKK
NILGKKKDCYVLEIQGSKMKVMIPVDKAEQVRIRPIIDKKEIKKVIALLK
KDEVDTEEDWKIRYQNNLNKIKSGSIYEVGEVCRNLFRRASGKELSIMER
KLYESAYNLVKMEVALSKGVTQEEAGNLVSDVLASTLSPSEKKAEEE
>LIC10557 response regulator
MKVAPTYSILLAEDDESNAELLIRHLERYNFDVDHVVDGVAAEIKLRKIR
YDLILTDNRMPKLSGLDFLERIPDMNRMTPIIFLTVSNEKETIIQAAHNK
KLVAYLLKPIDTHVLIEKICQALGIKTNSLIDKKEYPFEILPFTHTDKGV
GVGIELKGCPYGKSIEKLVQEIAFFLKELPSLRSILIKVNPEFFYFKSGT
QLLSSLKDRLAIKYEISKEDITIQTEH
>LIC10167 conserved hypothetical protein
MKQEVLTTIAEKNPILSRDNLDPIVLSDIEEKMIVQIAEYVREQFTTFDW
RWDDHSEMHDKTVTSLFLVKNDILQICGKNQSKTQEFIRILEYILEEEFD
E
>LIC11676 transcriptional regulator (TetR family)
MQKKIDIQHYFVHYKLSKKISRGNSMPKIVNHEKYKTEILAKCVDILARR
GYSAVSMREIAAELDVSTGTLYHYFATKEDIFKELVKFVLNKDIEELQIH
SKGDLGQTLETRIESLFQMVQAREAYFQNLLYIICDVSRLKNHEEEKSLI
ADTIKEYVHIITKHLGVTNPALNRILISVILGTVVQRILDSEAISLSETS
DVVKDFLSILLSNSFTF
>LIC13273 sigma factor regulatory protein
MRNILLLFISLILLSIVLLIGVLQTSSETLKPPFYYYPNGTIIQSSEEFP
GILGKKVDLLELEIAIKMAESGQSYENGIHVYDKGVSETIPVILAPKSYY
SVVKEFTRDILISLLYLSVAIWFFFYTRDLYMLLLFGSLSCLSLFNFFLV
GFHEFHFLFFFFLYFTAFVILNISFRLRGKELPTRWFAPEIIFSLIAGFV
GRTQKADPHIFGILATNGVYFILFSSVICIFFLVTDSIRNLFPIQSLFKK
LSLILAFSAISILPFVSVEFSEFISPDFSKLMILFAFLIFPALIIYGTFT
YSIVPVQIAFSSSLTSIYLILILAGGYLFLLGAFFKFDPIATDKYLEEFN
VLFLCSSIYTMSSINRRLSNLVDTWSFKRNQKLHSAMETISAMISAPISM
RATINNMMRKVSEALDISKILVLIPADKFPRTDLKNINFIRISSNSEIWQ
YFATNTEVTVTTHLAYGLGIRESVYKFLHNSGVQLTYPIFNYSRGKEVLA
VFLVGEKKNRKNFNLGELHFLKECTRMASMLLQNYTLLAEEVEKKRIVRD
LNMASIIDKTLHVAESRHIQGVKIGFFSIPAVGISGDYLDIQKLDSNTML
LALGDVSGHGLGTGYLVSAIRGIIQNQIRKKSDLSKIFKVINSFLIERYR
GSEFMTFICGEYNSQKETFHYINAGHSSPICIRKDGKIELRSETQRVLGV
LHTEYKHLTIPIYSGDKLILFTDGVTETFNDNEEIFGDENFLNLLKNNHH
LDPQDLSDLVLKTIQEFRGKKDPSDDISFICIEVNKNYDSNQ
>LIC11146 putative transcriptional regulator (DeoR family)
MRADRLLSILLQLQAKGRISSRDLAKKLEVSERTIHRDMEALSASGIPVY
AERGSKGGWELSEGYRTNLTGMKKEEIFSMILTSSTRIASDLGRKKDLDS
ALMKFMASLPPAYQKEAEMVRQRIYVDGAGWSCSEEELPFLSLIQEAVWQ
GKKIVLRYKTDEESKKRNVSPLGLVAKGKIWYLVAKYEKEFRTFRVSRIV
EAKLGDSFERPKRFDLEKYWKDSTQNFLSKIPSYPVRFKIHVSKIDFLKN
ILYIRILKYSKINKDWIEVIADLETREWALHHILGLGDSVVLWEPEELRE
SILISVRKILDSYSKNL
>LIC13242 response regulator
MKVLVLDSGTTVRKIISSFFPTEDFQIFEAGTAKEGLDLTFQEHFDLITI
GMVLPDSDGFTVCKTIRNGLIDNKQSICKNSKIFLITSGNIETNRIKSVE
SGFDGIFPKPTGIEEFKTVIEEIIKLAYQSSPIESKKAGKILIIDDSELN
LLLLGKILEKNGYSFQAFTEGKKAYEYLQSSNEVSYILTDWIMPDFSGEE
LVEAIRKQEKFNDIPIAVITGIEEKEDFKISIPQKNIYLLQKPYFERKIL
EYIQKV
>LIC11154 transcriptional regulator
MNPAMEELEEGKESSSEHITEVVKENLKLIRHTKGFSLDKLASRCGVSRA
MLSQIEQGKSVPTISVLWKIANGLNVPFSELLKEKGTEGVIVMKAENTKV
LFSSSKVFSSRALFPYNGNRKTEFYELILKPGGIEVADSHSSGTTENIVV
VSGKLRLRVGEKVVELEPRDSVFFRADIPHEYSNPTDQETLMYLVMDYRD
EIN
>LIC20021 ParB
MAKRSDFAGMDLLTAFGEKESSKLEIQLSDIVPNPSQPRVFGKEEVSDLV
ESMKRLGLIEPIVVRKSGKKYQIVAGERRYQAAKILKWNTIPAIETSASE
DKCFEMALAENEKRKSLNPWEVGRAIQFLRKEKKKTAEEVSKILGFTERY
VKQLSSIARLDQKSVGDLIKSGKDTSVKNLEALLKQKEGRGGEIISSRKL
IQSKIVLQIGKLSLQQREKFLKELSSLKKKYGIKD
>LIC11317 conserved hypothetical protein
MFFGLENCFFILIKESQKIKLKKIQYSFLRFVKMKDNKLWLLKSFSIVSF
FAKMFSNFYRMFFGVLSKHFLFYFLIIFSVSSESIQKIQSLDEIVSLDST
KEHGWEITLQKIDPVAFSDSYLKGQKNSNIQLEAYEAPGVYILPEESIQT
AFIVKKFIAPKNWKGSGLAVRLGTLTDKDKTYLNGTLIGETGDMNSTLPQ
AYDKIRIYQIPNGLIRKDEVNILIIEVKKYFQKEIGIEQDKTAIGDSLLI
QKELLETEYIKILLLMIYTTAGVYFLFLYLRRRADRENLYYGLFTILLVL
YQFLRNQIKYDLGIEFIYMKKLEYMVLATLVPLFANFIRLYFKYPKTTIL
KVLDGLYVSFAIFYFFSNNVEHYNFINKNLVQYGWILYLGITLNHLIRRV
IAKDRDAFLILIGVLITVFAAILDTLGARNVFVFPRLVGYSFLFFILSIA
TILANKFVRLNEEVEELNLGLEKKVEQRTEELRLSLEQVNRLKVQQDADY
FLTSLLINPLSSNKNTSEVIKTEFYTKQKKSFEFKNRTYEIGGDILISGN
VKLCGKKYVVFVNGDAMGKSIQGAGGALVLGTVFNTILTRSSISLYQNKQ
PEKWLEEAFLELQKIFESFDGSMYISIVLGLVEENTGLLYYINAEHPWTV
LYRNGVACYIEEELTLRKIGIPENEEHLVIKNFQMLPGDTIVIGSDGRDD
LLVGKEGNRVVNEDQNQFLKRVEEGNADLRKVYEEIIKFGVILDDLSLLK
VTYNPEDSKTKE
>LIC13427 response regulator
MRNKKSNLILISSNQKIIIVDDNQKYAQQLSSLLLSKKETIQISCAENIR
SGYKKILKGNFEVFFCDITIRKRLVGFYLVHRLRKRNDRIKIILMSTIFD
YRIFFILFYRIIKFSFALNGICRKSDVINGKLVIY
>LIC10395 transcriptional regulator (TetR family)
MTVTRHKRRSRNSLNRENIVQVAMEILQEKGIDRLSMRKIAEKLNCSVAS
PYSHFTSQEEIIQVLIAKGETELTQLLRNAQKNGKNAFEQLAGIARAYWD
FSLNNKELHKVMFNTVHGHMHRKAFPSLPTSYRVFLETIRNGCINQEFKL
PKSEYPAIARMMWAWMYGLMVLDLTNMLKRRRGGKDDPLAEGFLYFQKIL
LEE
>LIC11191 transcriptional regulator
MFKSLHSREAKIFCKNLIAARKDAHLTQLEVANRLGEPQSYISKIESGER
RLDVVEFWRIFKILGKSLEFYFQFDDKHDGFEKKSKTIKAASSRRKKK
>LIC20013 response regulator
MRAKLLLVEDDRSLGETLQERLEKEGYEVLWTVSAVSAKKLVKDERPHLI
LLDVRLPDGDGFALAEELKESKDCPPFLFLTAQAGAPERLRGFELGAEEF
IPKPFHLKELLLRVKHVLESHKHSVEETRFIYKDFMLDFQGFQIKRGGEE
FPLSKRDCALLHFLVSERNRTVSRAEILDKLWGEESFPTNRTIDNSIVRL
RQAFSEEGEKVIRSVRGVGYQWTGEIKNAE
>LIC13266 RNA polymerase ECF-type sigma factor
MREPILCNREDWDCIQKVLHGDFNSFELLMNRYQGLVYSQAIKAFRNETE
AEDFTQDIFLKAFESLSTFQGKSQFSTWLFVIARNEIIRKYRKEYPEISG
LDALLLAENEKEGEIYSEQESKFLKQENSEKIRNLVARLPELYRKPITLH
YFENMSYKEISKKLNLKMNTLKSYIFRGKEIMKDWLNNEKKE
>LIC10168 phage-related protein
MYKSDKKFPDRLKKLIEILGLSQAEFARSIDLKPAFISDLINQRAKSFSQ
ESLLKLRVAHNVNPLWLISGEGQMLITELEIKTDLETDHYRSLLRKIKTR
PQIEVLLESLMEVSDSELEALRVVIEKFRKKK
>LIC20134 conserved hypothetical protein
MACHEIAALRLGMMNLIGIKDETTIRHEQSEIGTVLESPGPIRSLAEAKD
FESLIKFYEISLTDLEEKISKMKKDDPKMAYYRSLLILTKKIEFELKNSV
FIFQNFFRDLEEIHDFVHEIFPA
>LIC12066 transcriptional regulator (MarR family)
MQLQLKNYILFLMNEKLSEQSIQAWAAGLKFYSSASSQIESALAKTNAIS
LTWYDILYTVYTKSKKRSRMSDIAREIILSKSALTRSVDKLVTEGFLKRE
KSEEDAREFIVEITFSGIQALRNSWPIYEEGIREIFASKLTFKETSELLR
IFRKLNKY
>LIC20081 transcriptional regulator (TetR family)
MKISATQAATIRKSILQIGIHLIRQNGPTVGIQEIADKAKIPKGSFYNYF
SSKDQFLIEALEEYTQNAILWNDQTLKKGKQKLFYLYEQKVILEKKFLQD
GISCLINVLSQYSSPKQQKLRNKLKLSLNSISKGILNSLLLNPQNYSKEI
SIHIQVLESSWRGAMLIAKATGDPSYLENFLSVHRKSIKEFL
>LIC10321 conserved hypothetical protein
MTGLKLRIAILILSVLSFFYYRFIPYFPDGIYYKNRMNSAFTNLNEELRH
LETGLGQINSISELENLQLEFPIVSGLKFVTESDLSSRKDPEGKLLKETL
KDGTSRLFFLKPSLVFCLPHPEKKKLILAELREDLFRVSFSGVESMLIPD
LKFGGYAEPGGFNKGRISFLLIEELSRSENAVNRIEIGSSPFIGYYYATP
ENSYGFLKGILILKPGNDGLFFLFLSGFLILLFLIDFMIRILRIKRNFFT
HKEGKEIQEIIGQISKRIDALQTAKQKAIESAQKSEVEEIQTLTSEEVDF
DLQNVPIPMKEVKQEDGPSIFVLPFELKREGYVSPAFLRDPEKFKEPEPI
APEIEKKRSEIFTPELQDLISKVNEPIREKPDIQIAKQEIEPEPISTNHT
ELGPGYMKWLNTLPIRERRKILEVLDELRYGLESEYSFILKYYISVFLDL
KLYGFAIHYYDRRNGSYSPFVTQGLRERTSGNMIFLYDDQYIGKESGTYS
IIEITDERKMDRFFRKKFDPIDLEICTSILTIPLSNFGIPFRFFLFFKDP
LTKENAQEIENLIFHSLEPVIPAFEEYDRKILGELFRDKRDVVSSRVHLM
RIATDGERGLTRSFKIEFHGKNFKTLESLRKKTMSQISEIIGPEDICFGI
GVGAFGLYTRKNLEKQIRSLIDQTGNPYDFVEDIYPENGKNLFIYL
>LIC11896 response regulator
MGQKSSFPKNEIDFLFSWMRTILLTEDEPGIRDTIQIVLESEGFKMIYAM
TGKECISLLKESPDLLVLDVGLPDGSGFEILKELRKKNSIPVILLTARES
ELDRVLGLELGADDYMVKPFSPRELVARIKAVLRRYDGNSEKKQTEFLTD
EDRKIIYYYGKSLSLTPYEYKTLLLFLKRPGKIFTREEIMDRVWTEPEES
FDRAVDTVIKNIRFRLKEIRPDLDPIETKRGQGYGLKDTL
>LIC13269 response regulator
MKNQSGNPGQKVLVVDDEEDIAELIRFHLEENGYQVDTCQNGLEVLPKLE
KNTPDLIILDLMLPGIGGMDLCKKIKEKYSMPIIMVTAKSGETEAVLGLE
LGADDYVRKPFSTRELIARVRSVLRRIKDEEEDEFEGNITIGNIFLNLKA
HKAFINNSEVDLTLIEYKILNLFMTNPGVAFTRDKLLDRVWGKDIYVTDR
AVDVNIKRLRDKLGDEKERLETIRGIGYRFNEA
>LIC11653 conserved hypothetical protein
MRIFALLFCLFLISTAELFAQLPDETPTPNRRQPTNTTQQAINLLEGFAE
SSWGESYANLREKFLSLSTNPQNDEKVEIVYEDKEKTLLIRRNGILYSYR
FYSTPKIVTESRPKDQRQPTTENKSEIEEENHSAPGVLFSVGVLFRYLPG
KEVQQKLEQKYGKPKKESLAENKIGGAVLWEKTDEKQSPPRGGYVVQWKE
AYKKMPFTRRVDYFSSSIKFQIEKEYKEFFNAEEIKTLRDLIP
>LIC10375 transcriptional regulator (TetR family)
MIRKKTTKQKETGKSQQTRSLLFKTAILSFQKEGYDETTMRTIAKKAGLA
VGASYYHFKTKEEIVLEFYRTTQEEANIQNIEFCKSNLDLKDRIKNIIRF
KLGQFIGYEKFLHVLSRSGGDPKHPLSPFSKETKQIREDAISIFRNAILD
SKNPFPSDLKEDLPLLFWLFQLGIIYVWLFDESTHKRKTELLIDKGLDLI
FQLLKLSSLPIFKSVRKSILSLVNLFKK
>LIC10678 response regulator
MSPTPNYSSYTVLAVDDSEINLKLIVHTLQPFGFQIFTAESAADARNVLL
TNRIDVLLLDVSMPDQDGFSFCRELREIERFKLLPILFITGINREVGFDE
AISHGGDDFIQKPFQPKELIAKIRAFIRIKILQDELLEQKKNYERELIMA
RKVQQELLPEKELEWNGVSLSTIFQPLMQIGGDYTDAWIEDDSLHIFIAD
CSGHGPSAALLAAMLKMQVSSLSPDQSLQEKVQTLRHNLEKILPDEFSIT
FFYGILHKDLSFEYSNGGHPAPMLYQNGEVSILPGMGPLIIPIEINVKEE
FKSVQLQKDSYMLLYTDGATEISDKSMNILGEDKLKKIFQESVSIGGDIL
VSMMESILAHSDRGTNDDDIAMMVLKL
>LIC20276 conserved hypothetical protein
MLKINVLSNKEGFRKPMGEHYPYIKIFADIIESGAWANLSSAAKTLYLVL
LKFSDQHFKPVWPSTEVLLRLTGFKTKKSIIQGKRDLIQAGLLQVTPGTG
HTSSRYYFCFNYPGSKIPPQGYNFGNPGGGEKETQGVGKNGSQGSGEVTP
NHINITITNNQHQEPEKTKKQVSLDELGKEYGPATLTEALAIAKGRGMET
NLRYVKGICKNLTKTNESLVPEFNQNQGEPYEKETTWNGFLRWSKDRLTK
SSIETLEKIRVEPDGRTLCILDPVTESLRMIIAKYFTEEIRPPILVIFSA
KNEENRITSTKH
>LIC10644 RNA polymerase ECF-type sigma factor
MKLSQDHDFSVFYKNYKDSIYKVIRFLSSDPEEVEDVAQEVFLNLYKSFS
NFSPEKGSFYTWAATIAKNTFYTYRKKQKKDMIVEGDAVFIESLQVEDDF
IQNIESKIVEEELREIISSLPEPEKSIILLKEINNYTLEKTSQALNISTR
TVSRKLLKALDLLREELERRKVVL
>LIC13408 transcriptional regulator (ArsR family)
MLYFLYMNAFAALADDTRREIVRLVAKNGKLTSTEISQNFKMTPPAISQH
LKVLKEAKVLHMKKEAQRRIYSLNNSGIDEMEDWLLDIKNLWNKRLDNLD
KYLLKIKKEKSHDKKLR
>LIC13441 transcriptional regulator (MarR family)
MGKTAKDLFLENQVCFPLYACSRALTAIYRPILEELGITYPQYLVLLILW
KEDGCSVKEIGKKLYLDSGTLTPLLKRLEDSEFVIRKRSIEDERSVEIYL
SAKGKKLRDKAVCVPSKLIESLEIDKKSLIDLKKDLDRLLLTLSEKVE
>LIC12496 sigma factor regulatory protein
MTWIKRFSRFKSDFLNPFTFFEREFNYSEAQSWKDQTRIDQSFIRLAFLL
HFMMYSTLAIPEVRSSQRGGVYLGIIFLVNVMGLVLSFQERFLSWVIHIS
NVIIIFLLMNLFHESFYHFRDLESLQIYNNYFLLISFIVIFQMFRLKKGS
CFLTGTVSICLHIFFVSIKRMELGLDDFPRILFVPDVVYVLCIVIGTSSV
IIVKRLISISSELDLEYKFIQQDLIVAKQVQENLFPGKLSIKGIRYEVMR
IAPNHIGGDFFDFVQLREGNTGIFLTDVAGHGIASALVASMVKIMVSTMP
YILKVHPSRLMDYIDDSLHKQFQSYHASAIYMFLDFISREVTFSNAGHPY
LIHGSFSKEFHEVETEGAILGFGIKKPIAEQVKFPLVEKDRFFLYTDGLI
ENKNREGKLLGTEGLLEILNANRFEKDLSTFKANVQKTVEDFFGNVALED
DTLFLIVEVE
>LIC11796 sigma factor regulatory protein
MNLKDYIKSYFQRVGWIPPIINLVCFIAPIVFLQNSSFSEKEKILLYLGI
IGFIYLVNYISFIFFLTKKILPEEEIRSKMRKRYRKGDDRMQSYLFPLPL
DDENYEIYGRTLTYNPIGGDFYNFLTDPQGNYWIGIGDSVGHGYLAGIFS
MMIFQNMSLLVKHNLSPYEVIEQINEDLLKRTEQNPKINPNLYATFLLIK
IDKEGNLEHSGLHPSFVIHQKKTRKNKIIETDGKFVSITMNSTLKNVQGK
SKFQLETGDIVFCFTDGLYEQKNNGNLYFGESLFQFLDEIPKNDLTKIAD
VLFTEILKHTGGKLQDDMTILMIRKK
>LIC12738 transcriptional regulator (MarR family)
MSPRMVIYLISRIRDEFHKHLNQELKEKNLSPLTTSHADILFALVKKNKA
QMQDIAKMINRDKSTLTALVDKLEVLGLVARTKDSEDQRIIHLELTPKAD
SVRPVLLGISRSLLGNLYRGFTENEKKELVRLLMKLYQNQNPESVTVDLL
Q
>LIC12582 transcriptional regulator (ArsR family)
MLYYNNMLKLDKQDSVFKALSDPKRREILDLLSIKPKTTGEICSHFKSLD
RCTVMQHLKVLEHAGLLIVKKVGRIRWNYLDHVPIQEIYDRWISKYAQPS
LEKLTRWKNELESIID
>LIC12431 transcriptional regulator (TetR family)
MDSPNQEMHESIELDSKWPEGQKKIFLAAIEIFAQKGFSAATTIEISKKA
GVAEGLIFKHFKSKKELLLRLVSPILEKFFAPLTLRRLQTMVFSQKFTSL
EQFLTAIFEERIGFVRSNKNLMRIILQEAFVTLEVRSLLERVFRQRVVPL
VQEHLKKFQDAGMISKEISISSAFRLVAVNLAGFVLLTEIFYPPKPEDGW
DQETELKRTIEFIARGLAPKIQEVPAPVLKPKKKPTVRKTATKVKKKKKR
S
>LIC10144 RNA polymerase ECF-type sigma factor
MVQSDSVDFSVLYEDNYRTVYHFLLKICGDPEVAEDLTQEAFLKAFTFFH
KFDSKIASFSTWTCSIAKNLYFKHYNKQKKEFGNIRLSDLVGDIEIDPEI
PENLEKVFLEKAIKDTIESLPEPEKSIILYKELKKKTLKETAQVLGISER
TVSRRLISAISLLRTKLEQQGFQF
>LIC13073 transcriptional regulator (TetR family)
MKMKVMDQDEVKHRIMDKALELFLKYGYAKTKMEEIARVLKISRKTLYKH
FENKNHLLFEILSHKHNLMSSTLEKISEDDSLSVHEKIQAINEFKISQFP
TGANEFILEIRDQAPDHYAYIKEVRMESVAKSVQALVKQGIEKGEIRKDL
NPTIFAALLNSAIEMTATPELLLNSPYSMMQLQGEIHGILFYGIMNSSET
QSVEKVSSD
>LIC11192 chpI, ChpI
MKTAISIPDELFRAAEKIAKKLGIPRSQLFAKALEEFIQSHSKESVTEKL
NKIYSNKSKETRNNITDLSVESLRKSLKNDSW
>LIC13230 dead, ATP-dependent RNA helicase
MKGTSMKKLKFSELNLSAEIQNAILEMGFEEASPIQSEAIPVILKGKDII
GHAQTGTGKTAAFAIPTIELLEVESKHLQALILCPTRELVIQVSEQFRKL
IKYKGNFEVVPIYGGQEIERQLRALRKNPQIVIATPGRMMDHMRRGSIHL
DEIKIVVLDEADEMLDMGFREDMEFILKDTPADRQTIMFSATMTDDVLTL
MKKFQNHPQIIDVTHQKLSAPKIEQIYYEIQENAKGEALARLIEYRNVKL
ALVFCNTKAQVDTVVELLKSRGYFAEALHGDLNQKQRDKVMSGFRKGSIE
ILVATDVAGRGIDVNNVEAVFNYDLPRDGEDYVHRIGRTGRAGKKGIAFS
FIVGKQIYNLKKIERINGIKIEAGKIPTLDDLEETKIHSYTSKVRSIVDA
GHIGKYVNQVEKLMGDDYTALDIAAALFKMTILKDSVTFDDSVQFESDFK
YEEKHSTKKKSGGGRYRDRNFGRSGSGSRSKSNSNSHFGNNSKDGSRSKF
SKGDKNQKQGGGATSFKKKKK
>LIC12312 glcK, glucokinase
MKSFLGIDIGAGSIKASLIDSNGNVLKSSFRKTGAETNEKQFLDSICDIV
SEMKNSSLTAVGIGSPGPIDSENGILIESANLPLLKNVTLVSHLKEKFSI
PVYYNNDANLAALGEYHFGLGKGSPNLVILTLGTGLGGGWVYQGKLFNGY
KGSGMEAGHVTYLPNGSLCGCGQRGCTEAYFSASGFLNRYKEKTGEVLDS
AEEFFEKTRKGDKTASILLNEGIDALAQLCRNLIHTINPEKIVFTGGLVK
SWDLFGDSLQNRIRELIFPIFRTYTQILPGGNVSGTLGAAALCMENLE
>LIC13220 hepA, ATP-dependent RNA helicase
MEEVLQLSLDFEPKSSSGYRGDFCYLTNSPESGIGKIVSSAEGKFTIEFS
VSQTKKTVSENSTYLRILPGYPSSLRNVEEYSSLMNLALTAYELKLTHAF
DKLSALSNSRTRLLPHQIESTYIVVNSLRPRFILADEVGLGKTIEAALVM
KELIFRRGYKKVLIVAPSPLLVQWQQELKNKFNEDFKIVKRKNFHTDGEK
NWRNFQHVITSIDFIKNPKYAEEILKTKWDIVIFDEAHRLRRDYHKITRA
YLFAEKISKKCECLLLLTATPFRGKLEELYYLMHLIDPNILGPYHTFVND
YILGNKADLKDKISKVLLRRRKIEVGGFTKRFAKTVRIELSSVEREFYEE
TTNYVRREYNLAMRTQNRAIGFVMIVFQKLLDSSVFALLSALTKRKFLLE
NKFHHIQKMESNLEEWDLDETEDVEEFVSGLDESVQLDLQSLKRELLSLN
RLILLGKKIKEDKKSIKLKETILKLQKEGHSKFIIFTQFRTTQDFLASVL
SDFQVTLFHGSLSADAKEKAIVEFKTKTEILICTEAGGEGRNLQFANVLF
NYDLPWSPLKIEQRIGRIHRFGQKDNVFIFNFASKDTVAERILEVLTNKI
RLFEESIGSSDELLGAIEDELDFNSSFMKFVTGNKSKTEMEEEIDNRIKI
AKKGFEKLGALVTPKLIDFNLQDYYSHTLEERSFNNTHLEEFVSRFTKIF
PEEAGFQLLRKKPQIYEIDSPQYKGKYGTFDSELALQNDSLEFLAFGHPL
IDKTVSYLIQNQKGWSTAFHSVSNKEYYVFLVEFQFTLNRTELFYFETNP
NTGSVKQIETLPEELREYNSSVRPSEISSHPELPSRLEENLIRTFISLDE
IVESRKKELGDQTLDLFQKEEFKIRTSNQNTLRQLEEKLMRQEAAFKWEG
KPEKKSAMNRTRNEIQKVKEDFDRELRKVRNGKTIQHRFQLFQVYLPS
>LIC10526 hrcA, heat-inducible transcriptional repressor
MDLTERHKRILKALVDEFIQENRPVGSKTLFDKHDIGLSPASIRTVLKDL
EDFGYLASKHTSGGRIPTERGYRFYVDSLVILYELTLKEKQRIQQEYLKM
QFKLDQILKATASVLSSLSNAAGIVIGPAKNLDTLKHIELIHVRGDEILM
ILVMRSGTVLHRNIFVDQNYSQEALYQVSKYLNDNLKGYDIYEIQNVIIP
KLMIRKDGPEDFIRIADLISSAMTPDNSEVTLYIDGFKNLYANFRDEEQQ
LSQVLSLLDDQGFLKAFFSEYIDQDGVFTIIGKDGDRSMSGVSIITSNYK
MGEKKIGALGIIGPQRMDYNRALPLVDFTSKLVSEMVTRISK
>LIC10994 kdpE, response regulator
MNPKILVADDDDRIRKMIRISLNASHYEVIESATIQETILKAAKNSPDLI
LLDLQFPDGNGITALREIRSWSETPVIVLSVLASDPEKISLLDGGADDYI
TKPFSMGELLARIRVALRNKTQDPGSPIFISGNLYVDLSNRNVKVSGITV
HLTPTEYIFLTFLIQHAGKVLTQEQIIRHVWGPFAKNESGSLRVHVASLR
KKIELDPSSPELLLTEPGVGYRLAIHL
>LIC12305 lexA, transcriptional repressor (LexA family)
MFSMKDLTDKQQAVLAFITAIIKERGFPPTIREIGDEFGITAKGAYDHLK
AIEKKGYLKTAKNQSRAIELIRQSPMESLPVQATSIPVIGQVAAGLPIFA
EENIESYIPVPDEMAKGNVPMYALRVQGDSMIEVGINDGDIAIIEKRDIA
RNGEIVVALIEDEATLKVYYKEQDQIRLEARNPKYKPIKTKKATVMGKLI
GLYRIY
>LIC11455 mfd, transcription-repair coupling factor
MKDLLNMIGDGVFSRFESSLKKKNSTSKIKSSFADSSNLKTQSNLTLKTQ
SVSASEKKISVNTEVVGSVYSVTTGSHSILASSLFQKLNQTILVVSENNT
SAEFLFREALSFLPSNDLIYLPGQEVLPYEYMRYPSEMKRERIKAIAKIL
SGEPVLIFTSVSGFLKTLPPIQTMQGRAIVLKKGKEIDLESLLIQLIDLG
YKRVQVCETFGEFSLKGGILDIFSSYSTEPVRIDLFGEEIESIRTFDPDS
QRSMTDLDQAVLLPADEYILSEEQKKEYQNFLKSSDSSLHLPEIPEGNYG
IYYEELIPLVRENHGILSYFSKPPILIFPSANSVKERLFHLEKEYLSLFE
KRSREVLCAPPEKLLSFGEEFKVLSESIGLSFVGLPPRNENDLVSLLKEA
PSFKGKIREVREKISELRAKGGWKIVLTSSFEAQTKRLQGLFEKEGVILL
NEDSTEPLPFHLGNHKSDTFLVLSELRNGFILENQKILILSENDIFGREY
KRKTRFKKQNSKALQSFIDLKEGDYVVHIHHGVGKFLKIERTSAGGKERD
FLKLEYSGGDSLFVPLDQISLVQRYIGGTESPRLDSLGKSTWKKTKDRVQ
KAVEALAEDLVQMYSNRLKLQGYAFPPDTIYQEEFEAEFEYEETPDQIEA
IEAVKKDLESSRPMDRLVCGDVGYGKTEVAIRAAFKVAMAGRQIMMLAPT
TILALQHYNTFKNRFENYPVRVELVSRFKTPAEIRDILADFSAGKVDMVV
GTHAILSSKLKPKNLGLLIIDEEQRFGVNHKETIKKFKNLVDVLTLTATP
IPRTLHMALTGIRELSIIATPPKNRQSVETYVLEEDDDLISDAIRNEIQR
GGQVFYLYNRVETIEEETNYLSKLVPEVSIGILHGQMTEDEIEETLLDFY
NRKYDILVTTTIIESGIDMPNVNTLFVKRADLFGLSQLYQIRGRVGRSDR
KAFAYMLLPKDRVVTEQAEKRLNTIFEYQELGSGFKVAMRDLEIRGAGNL
LGKEQSGDIMEVGFDLYVRMLEDAIARIKGEEIVVEVRTSVTLNTNFFIP
ETYISDTRQKIEFYKKLEGARDLDEIEEIYSEMLDRFGEPPEDAKTFILL
EKIRTLASNLGFEFVTEMKDEIKMKSGSYFRGDHTKIIQLISARTGLTLN
PKEPNVLIFQTEKKLEKEKLDTLIFLLSEMLPSKKV
>LIC12706 nusA, NusA
MAVKKIQSEGNLLEAIQQFCADKSLDREAVMGVIRDSLITAYKKKSGLEE
SSELEKPSPVTVEFASGKDSVVIAIAKKVVSGNPSSALEISLEDAKAIDA
SAEIGSVISFREKPVELSRIISSQAKQMVFQRLKDMEKELLFNEYKAKEG
ELTHGYFQRWKKDAMSIDLGKVEGIMPRREQNPGEKYHSGDRLKAIIQRV
ELRPREPIPVITLSRASADFVRKLFEMEIPEIYDGLVEIINVARQPSIRT
KVVVRATRGDIDPVGACVGMKGVRIQSIVRELGNERIDIVESSDDASEFI
ANAISPAKPVEVKVDGSGREAMVVVPDDQLSLAIGINGSNVKLASQLAGY
KIDIKTVTQYNAELASPEARERLERLFYSPVEETKVSMEQEEEEELTPLE
DLPGLSARIVGILKSEGIKDLETLIEYSQDDLAKLQGIGHTTAGQILKLL
RESVEWVEDN
>LIC10404 nusB, transcription termination factor
MALYQLELTQPPLKEVLKFKWYDKKTEPEERDFAVSIVNGVVKNQEQIDT
LIKKYSKNWDFSRISIVNKAILRLSIYALLYTWEVPKNVTIDEAVELTKE
FESEESARFVNGVLDAILKNEIKSDG
>LIC10748 nusG, transcription antitermination protein
MGTKKWYALQTYSGHENKVQKNIEKLIQQKKLEEKIFQVKIPTMDVAEMK
NGKKKVTKRKLMPGYVLIEMEMDDDTRFLIQSLPSVSTFVGSKDGGPEPL
SLEEVKNLFSESGDVASEEPVAPKILFKVGDSLKIIDGPFANFTGLVDEI
FPDKGRLRVKVEIFGRSTPVELDYLQVKTEN
>LIC13488 parB, ParB
MALKPKALGRGLGNLIPVNESKTPIDSSSEGALREIKISEIRPNPGQPRK
TFSEESLKELSETIKAHGVIQPIVVKQLDSGYEIISGERRYRACKLAGFI
KIPAIVKNVSENQSMEMAIIENIQREDLNPIEEAIAYKTLSEKLNLKITD
ISARVGKNRSTISNLIRLLQLPDVVQDLIKNGRISEGHARPLLSLADRKK
IEQLAYQIAEKGLTARQVEELVSNISEGRSSIPEKKRSRKDVNIVELENK
FRKKYSMKIEIGHNQNSGKGKMTIVYPNLEAMEKILNALGL
>LIC11791 recG, ATP-dependent DNA helicase
MSKPLIVQSDRTMLLEVDNPEFEACQSVVSKFAELEKSPEYLHTYRISPL
SLWNAASIKMSADEIVECLEKFSRYSVPKNIVNEIREQISRYGKVKLVKE
ESGELAILSNEKGFLQEIGNHRAVQPFIESTFPDKIYIKKEYRGHIKQAL
IKIGFPVEDLAGYDEGNKYGFNLRPTSISGKKFGMRDYQRACVEVFHAGG
GNEGGSGVVVLPCGAGKTIVGIGVMQIVGAETLILVTNTLSIRQWRNEIL
DKTDIPPEDIGEYSGEVKEIRPITIATYNILTHRKKKGGDFTHFHLFGAN
NWGLIVYDEVHLLPAPVFRMTSELQAKRRLGLTATLVREDGLEEDVFSLI
GPKKYDVPWKELESKSWIAEAKCKEIRVNMEDDLRLKYSIADDREKFRLA
SENPEKMKAIGLIMKKHSESHLLVIGQYINQLEEISKKFNIPLITGKTPL
PERQTLYDAFRSGKIKSLVVSKVANFSIDLPDANIAIQVSGTFGSRQEEA
QRLGRILRPKGHDNTAVFYSLISRDTNEERFGQNRQLFLTEQGYEYEIYT
LDQFREAQEELAQLQLNNV
>LIC10738 rhlE, ATP-dependent RNA helicase
MKFEELSIHPKLLSAIQEIGYTELTPIQEKSIPHGLEGKDITGLAQTGTG
KTVAFLIPVIHNILTKGIQGIAALVLAPTRELTMQIAEEAKKLLKHSEGI
RSVPIIGGTDYKSQNKDLEGLNGIIVATPGRLIDMIKSGSIDISNVEFFV
LDEADRMLDMGFIQDIRWLLHKCKNRKQTLLYSATLSVEVMRLAYRFLNE
PVEIQINPEKIITERIDQKIVHLGREEKIPYMTNLIINSKEEGQGIIFTN
YKANIPKIVYTLRKYGVPVTGISSELDQKKRLRLLRDFKSGKYRYMVATD
VASRGIDVENIDIVYNYDLPQDTENYVHRIGRTARAGRKGKAIGFCSESD
YVELEKIEKYLKQKIEILEVNEEYIQFPAGDFQSFIGGDSYDREKETHFK
QNGKRPHDNDRAPHKHDRNRKRDKRHTSHTHSTAKDSHKKKPAAAIQEAE
LFLQKADSVLSSEPKGKKSAKDQHRFQNKDKQSRTGRGAQNSRNQNKNQQ
FGKQYDKNKRNLFDINDTVKEDTKKKKVSIWQKIKSIFGG
>LIC12636 rho, Rho
MATARRDNKNRHQHSNHNHNNQNDSGDSFEEESTNQESQEFDSSENSDPR
SRKRKRGGYEGPAPAPIDLVELKKKAISDLIEVAKSLGVENTGGLKKQNL
IFAILQAQAERDGQVHAAGVMEKLPDGYGFLRSPDYNYVPGPDDIYVSPS
QIKLFGLRTGDTVEGQIRPPKESERFFAMLRVETVNSYTPDVAGKRALFD
NLTPLYPNERLKMEYDPSMLDTRILDLMCPIGKGQRALIVAPPRTGKTIL
MQNIANAITSNHPECSLIVLLIDERPEEVTDMARHVRGEVVSSTFDEPAQ
RHVQVAEMVIEKAKRLVEHGKDVVILLDSITRLARAYNQVIPTSGKILSG
GVDSNALHKPKRFFGAARNIEEGGSLTIIATALIDTGSKMDEVIFEEFKG
TGNMEIHLDRKLSDKRIFPAIDINKSGTRKEELLITKDVLQKVFVLRKVL
SPMSITESMELLLEKMRLSKTNDAFLASMNTQ
>LIC20066 rnC, dsRNase III
MSFKKAQSHFFLKNPERVRSLQKLSKKIGIKFSKVEYYNTAFIHSSYKNE
NQEILEDNERLEFLGDSVLGLVAARSLFRKYPKANEGELSRIKSRIVSTP
ILNSISEKLELSEYLLLGKGEKNSLGKGRRKLSANLFESLVGAIYLDQGF
EIAEKFILRHLSEFVENPEKEESVRDYKTQLQEYSQKHFKILPIYRTKSE
SGPDHAKTFQVVVRIRDQWEASGSGVSKKSAEQNAAKELYNRIRKKT
>LIC10035 rnR, ribonuclease R
MNIKKKQTTENKSVKSNRKKKTFDKSNKTKKERTDGFRENEIGKKILKYI
QSRAGSVIQFKDLNAKILREENQNSYGKKREKWEFQEKEREILETLKILE
TEGLIELEKKNIIINSNQKLQGTISISKKGDGFVKLSSGVEIFVPNQYTQ
SAIQGDLVEVRPYGVGKKRRLEGEVTEILRRGRDLYRMIVTEKEPKFIFG
KLLDIDGEEKEGYLLRKTILTDLQEEIQSGDVLIVKLKEETEHEKNLYEV
QFLRFESDTKEDLDLMRMLMKYNYNILYPENIILDLPEEVNESTVDDWNE
RVDLRNLKCITIDGEYSKDFDDAISFIEEKNRIRFYVHIADVSYYVRPGN
DLDEEAYNRATSVYLGSRVVPMLPPELSESLCSLIAGKNRLAFTVEMEAD
WKGKITHAKYYKSIINVKERYTYNKAESEILSGDSDNWIFRMNEFAKILR
TKRIEDGRVDLNLKENKVVTDSEHNVIEIAIQDRLQSHILIEEFMLSANI
KVAEYIRKKKHPTLYRVHEAMNEEKIESLNAFLQLNATKILLKDSSYESI
RSVLKELEAKPAERLFNMFLLRTFMQAYYSGEHLGHWGLGFEDYCHFTSP
IRRYPDLVCHRVLQNILLGKKPIYTPEEIVTFGLHCSHQERKASDAERDY
YKLKACRYLEKTGIKEFSATITGCRPHLIFVDLENPAVDACLFSSEFTDE
GEIRLETDFSFYSKKYSKIYTLGDKIEVELDRIDYEEIKIFVKMKKFQKK
V
>LIC12846 rpoA, DNA-directed RNA polymerase alpha chain
MSLKSLLKGFKRPKKIEFNTEANTPNYGKFVAEPFERGFATTIGNSLRRT
LMSSIEGAAISAIRIEGVNHEFSFIEGVAEDVTRIILNLKQVRIKYEPEE
KDQSKIIHLELKGAGYFRAGDLAVDSSIEIMNPDLHIATLNEDANLVMDL
EIQRGRGYVPAEEKKKDIEVLGTIPVDSIFSPVQKVVFEVSETRVAQRSD
YEKLTLEVWTDGSVSPDDAVAQAAKILKEHLTVFINFEEELEEEDDELDE
ADEKLKASLSKHVEELELSVRSLNVLRSLEIDFIGDLVKRSEEEMSKSKH
YSDQCLQELKVKLSTLGLSFGMRDF
>LIC10753 rpoB, RNA polymerase beta subunit
MYGQVERKRVNFGKITNLDYLPNLIQIQKRSFDWFLQADVKDETKRRHQG
LEAVFRETFPIESPNNDMIMEYSHYILGEPKRSPQECKDTDATFAMPLKA
VIRLIIKETGEIREQTVYMGDLPVMTEQGTFIINGAERVVVSQLHRSPGI
FFSYDMERDVFSARVIPYRGSWLEFEMDNKGILIAKIDRKKKFPATLLVK
SLGHGTNEEVLRLFYSSKKEKIAGATSKDLKKILGRRTINDIINMETGEV
MLEAGSKINEDNISILKEMKVKEVELIEFPKGKDNPILINALEKDGVNDY
EDAILKFHSLMRQGEPSTIENATTELTRLFFSPKTFDLGEVGRYKINSKF
EFNNPKEFSGEKSRVLRPADIIETVRYILNLFSETENYYPDDIDHLGNRR
IRSVGELISNQLKTGFSRVERVIKERMTVQEIETQTPQLLISIKPITAVI
NEFFGSSQLSQFMDQTNPLAELTHKRRLNALGPGGLSRDRAGMEVRDVHY
SHYGRMCPIETPEGPNIGLILSMSSYARVNDYGFLETPYRTVKNGKVTGQ
IEHLTADKEEYHYIAQASGVIDEKGELKNKLISTRHRGDFPFRNPSEIQY
MDLAPLQVVSVSTALIPFLEHDDANRALMGSNMQRQAVPLLREEAPFVGT
GMETRAAYDSRICIVNKHDGVVTSVDAENIVVERKGGKESDTYQLTKFKK
TNQGTCFNQKPIVGVVHSEINGKVSKVSKEKIEVTGENGELKEYVLQIGS
KQYSPIVSAGEEVKRGSTLAGQVVVGEKLDEMGNILVKGTVLADGPAVDN
GVLALGRNVLAAFMPWEGYNFEDAILISERIVRDDVFSSIHIEEFEIQAR
ETKLGPEQITRDIPNLSDKAFRDLDETGVIRIGAEVKPGDILVGMVTPKG
ETDLTPEYKLLHSIFGEKAKDVRDSSLRMPNGFEGTVIDIKRFSRENQDE
LPAGVEEMVKVFVARKRKLLVGDKMAGRHGNKGVVARVMAEEDMPYMEDG
TPLDIVLNPLGVPSRMNLGQIFETQLGFAASKLGISFETPVFDGAEESDV
DNFCKEANLPLNSKFKLYDGRTGLPFMNEVFCGYIYILKLAHLVEDKIHA
RSTGPYSLVTQQPLGGKAQFGGQRLGEMEVWALEAYGASHTLQELLTIKS
DDMLGRARIYEAIVKGIHSIKPGIPESFNVLVQELRGLALDIIITDSEGN
TVDISDYEDEYSKSKKKIKFETIENA
>LIC10754 rpoC, DNA-directed RNA polymerase beta' chain protein
MRSHNDFESITIRLASPERIKEWSYGEVKKPETINYRTLKPEKDGLFCEK
IFGTTKDWECYCGKFKSIRYKGVVCDKCGVEVTHSKVRRERMGHIELAAP
VSHIWYYRSVPSRMGLLLDMTVNQLKSVLYFEKYVIIDPADSGRNRGELI
DEEEYHGYLDEYGDKFVAGIGADAIKELLARIDVDAEARMIRQKIQDKDK
ISDKRILKRLEVLEAFRDSGNRPEWMVLDIVPVIPPELRPMVQLEGGRFA
TSDLNDLYRRVINRNNRLKRLLALKAPEIIVRNEKRMLQEAVDALFDNSR
RKRAVKGKGNRPLKSISDMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPEL
KYHEMGLPKKMALELFKPFIMKRLVDLDLAPNIKSAKKKVEAEDKEVFDV
LEYVVKEHPVMLNRAPTLHRLGIQAFLPVLVEGKAIKLHPLVCHAFNADF
DGDQMAIHVPLTPKAQLETWMLMLSPHNILNPANGHPICGPTQDIVLGIY
YLTSELPSEPGVPLKSFSNLEEVHYAIDRGVVEFRTKISVYHQGKILETT
PGRLIFNTILPEGYAYVNRPLSDKETNRIIADVYDKYGPAKTVLMLDDIK
KLGYRYATLFAPTISIEDIRVSPGKVGLVGDANKEVEKADSEYRKGIITN
EERRKKVIEIWTKTNDLITESMFKELEKDKGGFNPVFIMAASGARGSKQQ
IRQLAGMRGLMAKPSGEIIELAIRSNFREGLSVLEFFISTHGARKGLADT
ALKTADAGYLTRRLVDISQDVIISEDDCGTEESISLGVVKEGENVIVSLN
DRVFGRYTAEDVIDPVTDQVVYPRNTLITREVGQKVENLGYDKIRVRSPL
TCESKQGVCIRCYGMDMARLIPAEIGEAVGTIAAQSIGQPGTQLTMRTFH
IGGAASAKVQEKEHKVSYTGIVNNINGRLITNEKSQSVFSRRGSIVIQRL
IQQYKTEELSNLRVENGQKVDKGELVATSPAGENITSEMPGTIHIENGLF
RILGEEAVIPVKTGTIVNVKVNDITQPNQPLAEFDPYNEVGISEIDGTVQ
WMDLEIGKNVRRDEDLRTSNILLKVIEQRREKLNPRIAVISGGSREEYSV
PVDAIISVQDGDKVKAGDILFKIPTVAEKTRDITGGLPRVDELFEARRPK
DATTLAETDGKIEISGEIVKEKRVLYIHPDNPDLEKVKVTIPIGKQIRVR
NGDFVKRGDQIDDGNLDPHDILRVKGVTALQVYLVQEVQEVYRLQGVHIN
DKHIEVVVRQMLRKVLITDSGDTSFVNQQQIDRLVFNEENKRVIAEGGSP
AESVPILLGLTKASLNTESFFSAASFQETTKVLTDAAIKGKTDNLMGLKE
NVIIGHMIPAGTGTKKYKDIAVFKSAYGDLDRPLEEEEEEEIPQAIAEES
DAEE
>LIC11701 rpoD, RNA polymerase sigma-70 factor
MENLQSMPEVQKIISLGKANGEVSYDDINEILPDKILNSEKIDDFFTLLH
EMGIEIVEEYTRNTLEPASTLVPKDDSKPARKKKESSASTSGSEDPIKLY
LREIGKVSLISGETEVFLAKRIEKGEKIIEETILSSSILRANYIKLLPKI
RSKKIKVYDLIRVDKMYALNAEEAHKLEELFFKNILVIQEQEKVLQEAVS
KIRKYSETSKKYKEFKEKIDASTEIIHNAIRELGVSQKEIQKISQKIKSM
VFRIKEIDRHFLKIKAQYGQDVRDIKAFNRFIEKNEKLDDIEVKMGVNID
EVREVIKDIRNNERKLRRMEQEAGSTVQEIKDWGEKIIKGEREISQAKKE
LVKANLRLVVSIAKRYANRGMHFFDLIQEGNIGLIKAVDKFEYKKGYKFS
TYATWWIRQAITRAISDQARTIRVPVHMIEQVNKVIRETRLFIQEFGRDP
NNEEIAERLGWPVQKVKMVKNVAREPISLEIPVGSEEDSELGDFIPDTEV
ETPVNAAASSILAEQIRQVLHTLPAREQKVIRMRFGLDDGYPQTLEEVGY
QFKVTRERIRQIEAKALRRLRHPSRSKKLKDYIDG
>LIC11545 rpoN, RNA polymerase sigma-54 factor
MNLSQSLVQKQTQKLVMTQDLRQSIELLPLSTLELSDRINSELVENPMLE
EEYASERNRTPDLYSRDDLKRKEKNDFLKNSDVSWQDHFSLDKAGGAGTD
ASDRNQKYIESSPEKSSLSEHLLWQLRLSNLKPDEISIGEILISMLNDHG
FIPIPIPDLCTEMKLNEKKVRKVLDQIHRLDPIGIGAKDVQETLLIQAKI
LKPEDLNLHILIRDHIKDLEKLDYKSISKKMEIQLESVESLASEIKKLEP
YPATLYTPNKPDYVIPDVIVREVDGEFDIYINDEWIPRLKVNKEYKNILK
NAKESDKEYIATKLSSAEWLIRSVNQRRQTLFKVTSAIIEMQIAFFKKGI
QHIRPLTLKDIAEKLEMHESTISRITSNKYIQTSRGIMELKWFFSSGVRS
TEGGIESSKKIHDLIRNLVKEEQSDNPLSDQEIVDAIGKQGIEIARRTVA
KYRKILKILPSSQRKKVKSLESR
>LIC13189 wecD, acetyltransferase
MEKFKMNIKEASLLDLPEIAKLFDEYRQFYKQKSDLKGAEKFIEERILKQ
ESKIYLLMDGNTCCGFTQLYPIFTSLSMKRAWILNDLFVRLEHRKKGGGR
ALIEKTAELARETRAKYIQLSTAFDNRIAQKLYESIGFVKDEEFIYYTWV
V
>LIC12019 yoaA, ATP-dependent helicase
MNRSLEYFDKLSSLWDDFEPRKVQIQLSQKIEDSLYNGTHLIAEAGTGVG
KSLAYLIPAALISIETEEPVVISTETKSLQQQLLSKDIPMVSKILGIDLK
AEVAMGASNYVCKRKMNHVFRDGTFGPEMIPHLDSFNQWIQNTESGRKQE
FNGTASYDFWNRITREADNCLGRNCPNFSHSFYFLEREKWKRSNILIINH
HLLAAHIASDFKILPEFNRIILDEAHNFPDIIGSSFRREIRSQEIQKLLQ
QIWLPNKNSGVAVSIGSSPLKDLATQAGEALTIFFNALSGEVPLNFYSPQ
RIKRPLKLDRGKFAEILFEIVEILQKHLSKLSKDNEDITEKESALVLEML
AGRLNEIASSLETFRQVDDTNLVYWIEPPDQNSKEIYYKICMEPLSPDEI
IRDQFASRMQSIVFTSATLSTSGNDFKYFQKKIGNLNTSNLSVPSPFPYQ
KNALLYVPKEIRDPVADPDGYHADLAKQILWLVELTQGNTFVLFTSFKSL
KLVYDAIRPHTDLPLFSQSDLGPDGAKQMYLQTPNSVLFGVSTFWQGIDI
RGDKLKSVIIAKLPFQVPNDPVLETKSEKLKESGGNPFAELQLPYACTVL
KQGFGRLIRSGTDTGIVSILDPRMFTKTYGRDLLKSLPPAKLIQNREDLR
REFSNLPK