Gene list
Applied filters:
COG category: Transcription
Organism: Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130, Fiocruz L1-130
Number of genes found: 123
 | ||||||
| Show UniProt / TrEMBL protein name | |
View in Fasta format (DNA) | |
View in Fasta format (Protein) | |
|
| ||||||
| Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130, Fiocruz L1-130 | ||||||||
|---|---|---|---|---|---|---|---|---|
| Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
| NA | LIC12438 | transcriptional regulator | chromosome I | CDS | 2958782 | 552 | + | 0.317029 |
| NA | LIC13408 | transcriptional regulator (ArsR family) | chromosome I | CDS | 4178745 | 354 | - | 0.316384 |
| NA | LIC11653 | conserved hypothetical protein | chromosome I | CDS | 2018797 | 732 | - | 0.357924 |
| NA | LIC13269 | response regulator | chromosome I | CDS | 4007977 | 702 | + | 0.383191 |
| NA | LIC11848 | conserved hypothetical protein | chromosome I | CDS | 2242765 | 831 | + | 0.392298 |
| NA | LIC10332 | response regulator | chromosome I | CDS | 377576 | 762 | + | 0.374016 |
| NA | LIC12431 | transcriptional regulator (TetR family) | chromosome I | CDS | 2950361 | 756 | - | 0.366402 |
| NA | LIC20275 | ParB | chromosome II | CDS | 347953 | 846 | + | 0.351064 |
| NA | LIC10275 | conserved hypothetical protein | chromosome I | CDS | 313254 | 315 | - | 0.27619 |
| NA | LIC20105 | DNA binding protein | chromosome II | CDS | 122757 | 1110 | - | 0.335135 |
| NA | LIC12798 | transcriptional regulator (TetR family) | chromosome I | CDS | 3404779 | 615 | + | 0.386992 |
| NA | LIC12490 | RNA polymerase ECF-type sigma factor | chromosome I | CDS | 3016639 | 621 | - | 0.392915 |
| NA | LIC12757 | RNA polymerase ECF-type sigma factor | chromosome I | CDS | 3354605 | 543 | - | 0.338858 |
| NA | LIC11110 | histidine kinase response regulator hybrid protein | chromosome I | CDS | 1371949 | 915 | - | 0.391257 |
| NA | LIC13024 | conserved hypothetical protein | chromosome I | CDS | 3686669 | 369 | + | 0.336043 |
| NA | LIC13285 | RNA polymerase ECF-type sigma factor | chromosome I | CDS | 4028692 | 510 | - | 0.339216 |
| NA | LIC13150 | ATP-dependent DNA helicase protein | chromosome I | CDS | 3860811 | 2175 | + | 0.382069 |
| NA | LIC12189 | conserved hypothetical protein | chromosome I | CDS | 2642892 | 528 | - | 0.363636 |
| NA | LIC20111 | sigma factor regulatory protein | chromosome II | CDS | 131807 | 1494 | - | 0.363454 |
| NA | LIC13273 | sigma factor regulatory protein | chromosome I | CDS | 4012567 | 2379 | + | 0.332493 |
| NA | LIC13047 | conserved hypothetical protein | chromosome I | CDS | 3719569 | 297 | - | 0.316498 |
| NA | LIC11012 | guanosine polyphosphate pyrophosphohydrolases/synthetases | chromosome I | CDS | 1233953 | 2025 | + | 0.382716 |
| NA | LIC12257 | conserved hypothetical protein | chromosome I | CDS | 2723491 | 513 | + | 0.354776 |
| NA | LIC13292 | conserved hypothetical protein | chromosome I | CDS | 4036193 | 528 | + | 0.304924 |
| NA | LIC20029 | conserved hypothetical protein | chromosome II | CDS | 28376 | 438 | + | 0.376712 |
| NA | LIC10644 | RNA polymerase ECF-type sigma factor | chromosome I | CDS | 786949 | 525 | - | 0.321905 |
| NA | LIC12368 | conserved hypothetical protein | chromosome I | CDS | 2869757 | 1197 | - | 0.381788 |
| NA | LIC11317 | conserved hypothetical protein | chromosome I | CDS | 1624216 | 2289 | + | 0.32547 |
| NA | LIC10395 | transcriptional regulator (TetR family) | chromosome I | CDS | 451514 | 612 | - | 0.379085 |
| NA | LIC11380 | RNA polymerase sigma-28 factor | chromosome I | CDS | 1697815 | 801 | + | 0.37578 |
| NA | LIC10168 | phage-related protein | chromosome I | CDS | 198377 | 399 | + | 0.360902 |
| NA | LIC10568 | conserved hypothetical protein | chromosome I | CDS | 693096 | 744 | + | 0.321237 |
| NA | LIC10557 | response regulator | chromosome I | CDS | 681980 | 684 | + | 0.337719 |
| NA | LIC12738 | transcriptional regulator (MarR family) | chromosome I | CDS | 3336564 | 456 | - | 0.375 |
| NA | LIC12807 | response regulator | chromosome I | CDS | 3412218 | 702 | + | 0.349003 |
| NA | LIC12016 | conserved hypothetical protein | chromosome I | CDS | 2427612 | 408 | + | 0.362745 |
| NA | LIC11817 | RNA polymerase ECF-type sigma factor | chromosome I | CDS | 2210424 | 555 | - | 0.389189 |
| NA | LIC20081 | transcriptional regulator (TetR family) | chromosome II | CDS | 91097 | 579 | - | 0.303972 |
| NA | LIC10167 | conserved hypothetical protein | chromosome I | CDS | 197666 | 306 | - | 0.369281 |
| NA | LIC20254 | response regulator | chromosome II | CDS | 320975 | 732 | + | 0.374317 |
| NA | LIC11283 | conserved hypothetical protein | chromosome I | CDS | 1583910 | 420 | - | 0.369048 |
| NA | LIC20082 | transcriptional regulator (ArsR family) | chromosome II | CDS | 92473 | 1017 | + | 0.431662 |
| NA | LIC12666 | acetyltransferase | chromosome I | CDS | 3226395 | 459 | + | 0.503268 |
| NA | LIC13025 | conserved hypothetical protein | chromosome I | CDS | 3687142 | 432 | + | 0.284722 |
| NA | LIC11676 | transcriptional regulator (TetR family) | chromosome I | CDS | 2040366 | 654 | - | 0.331804 |
| NA | LIC11353 | ParB family protein | chromosome I | CDS | 1667349 | 399 | - | 0.345865 |
| NA | LIC10375 | transcriptional regulator (TetR family) | chromosome I | CDS | 424630 | 687 | - | 0.317322 |
| NA | LIC12619 | conserved hypothetical protein | chromosome I | CDS | 3168598 | 1077 | + | 0.379759 |
| NA | LIC12654 | transcriptional repressor (LexA family) | chromosome I | CDS | 3218605 | 630 | + | 0.350794 |
| NA | LIC12206 | transcriptional regulator (MarR family) | chromosome I | CDS | 2659190 | 321 | - | 0.345794 |
| NA | LIC13039 | transcriptional regulator (MarR family) | chromosome I | CDS | 3711765 | 450 | + | 0.371111 |
| NA | LIC12472 | acetyltransferase | chromosome I | CDS | 2994211 | 357 | - | 0.330532 |
| NA | LIC13266 | RNA polymerase ECF-type sigma factor | chromosome I | CDS | 4005292 | 579 | + | 0.352332 |
| NA | LIC13214 | putative cytochrome oxidase subunit | chromosome I | CDS | 3942741 | 585 | + | 0.360684 |
| NA | LIC10321 | conserved hypothetical protein | chromosome I | CDS | 364857 | 2091 | - | 0.346724 |
| NA | LIC20021 | ParB | chromosome II | CDS | 21752 | 708 | + | 0.361582 |
| NA | LIC20013 | response regulator | chromosome II | CDS | 12030 | 693 | + | 0.406926 |
| NA | LIC10386 | RNA polymerase ECF-type sigma factor | chromosome I | CDS | 439864 | 549 | + | 0.313297 |
| NA | LIC20276 | conserved hypothetical protein | chromosome II | CDS | 349231 | 939 | + | 0.381257 |
| NA | LIC11617 | transcriptional regulator (ArsR family) | chromosome I | CDS | 1979639 | 300 | - | 0.396667 |
| NA | LIC12616 | conserved hypothetical protein | chromosome I | CDS | 3164457 | 525 | - | 0.358095 |
| NA | LIC11154 | transcriptional regulator | chromosome I | CDS | 1423318 | 612 | + | 0.387255 |
| NA | LIC13242 | response regulator | chromosome I | CDS | 3978293 | 771 | + | 0.317769 |
| NA | LIC11896 | response regulator | chromosome I | CDS | 2293595 | 723 | - | 0.370678 |
| NA | LIC11584 | transcriptional regulator (TetR family) | chromosome I | CDS | 1942994 | 603 | - | 0.439469 |
| NA | LIC10013 | sigma 54 activator | chromosome I | CDS | 17484 | 894 | + | 0.324385 |
| NA | LIC10041 | transcription activator or transcription antitermination factor | chromosome I | CDS | 49986 | 540 | - | 0.338889 |
| NA | LIC10144 | RNA polymerase ECF-type sigma factor | chromosome I | CDS | 173425 | 525 | + | 0.32 |
| NA | LIC10975 | transcriptional regulator (AraC family) | chromosome I | CDS | 1178726 | 1182 | - | 0.313029 |
| NA | LIC10378 | transcriptional regulator (PadR family) | chromosome I | CDS | 429051 | 351 | + | 0.361823 |
| NA | LIC12046 | hypothetical protein | chromosome I | CDS | 2465784 | 741 | - | 0.260459 |
| NA | LIC10559 | RNA polymerase ECF-type sigma factor | chromosome I | CDS | 684522 | 546 | + | 0.395604 |
| NA | LIC12825 | conserved hypothetical protein | chromosome I | CDS | 3427474 | 546 | - | 0.327839 |
| NA | LIC12066 | transcriptional regulator (MarR family) | chromosome I | CDS | 2500970 | 477 | + | 0.343816 |
| NA | LIC11796 | sigma factor regulatory protein | chromosome I | CDS | 2189530 | 981 | + | 0.329256 |
| NA | LIC10666 | transcriptional regulator (ArsR family) | chromosome I | CDS | 810487 | 381 | - | 0.454068 |
| NA | LIC10214 | transcriptional regulator (CarD family) | chromosome I | CDS | 243511 | 594 | + | 0.400673 |
| NA | LIC10425 | conserved hypothetical protein | chromosome I | CDS | 486553 | 945 | + | 0.352381 |
| NA | LIC20104 | DNA binding protein | chromosome II | CDS | 121327 | 1185 | - | 0.339241 |
| NA | LIC11684 | transcriptional regulator (Sir2 family) | chromosome I | CDS | 2046831 | 741 | - | 0.376518 |
| NA | LIC10598 | conserved hypothetical protein | chromosome I | CDS | 730692 | 2055 | + | 0.346472 |
| NA | LIC13441 | transcriptional regulator (MarR family) | chromosome I | CDS | 4218355 | 447 | - | 0.326622 |
| NA | LIC12582 | transcriptional regulator (ArsR family) | chromosome I | CDS | 3129565 | 351 | + | 0.344729 |
| NA | LIC11231 | transcriptional regulator (TetR family) | chromosome I | CDS | 1525050 | 552 | - | 0.344203 |
| NA | LIC13073 | transcriptional regulator (TetR family) | chromosome I | CDS | 3754017 | 630 | - | 0.34127 |
| NA | LIC12452 | conserved hypothetical protein | chromosome I | CDS | 2970193 | 564 | - | 0.390071 |
| NA | LIC10678 | response regulator | chromosome I | CDS | 822285 | 1134 | + | 0.39418 |
| NA | LIC13088 | response regulator | chromosome I | CDS | 3774974 | 672 | + | 0.377976 |
| NA | LIC13427 | response regulator | chromosome I | CDS | 4202746 | 408 | - | 0.232843 |
| NA | LIC11482 | conserved hypothetical protein | chromosome I | CDS | 1830045 | 366 | + | 0.325137 |
| NA | LIC20178 | DNA binding protein | chromosome II | CDS | 221026 | 1272 | + | 0.286164 |
| NA | LIC11191 | transcriptional regulator | chromosome I | CDS | 1467284 | 297 | + | 0.350168 |
| NA | LIC12496 | sigma factor regulatory protein | chromosome I | CDS | 3021994 | 1383 | - | 0.357918 |
| NA | LIC12792 | conserved hypothetical protein | chromosome I | CDS | 3399054 | 774 | - | 0.379845 |
| NA | LIC20134 | conserved hypothetical protein | chromosome II | CDS | 157308 | 372 | - | 0.330645 |
| NA | LIC11146 | putative transcriptional regulator (DeoR family) | chromosome I | CDS | 1413750 | 954 | + | 0.354298 |
| NA | LIC20115 | RNA polymerase ECF-type sigma factor | chromosome II | CDS | 137601 | 522 | - | 0.394636 |
| NA | LIC10521 | conserved hypothetical protein | chromosome I | CDS | 628614 | 549 | - | 0.360656 |
| NA | LIC10279 | conserved hypothetical protein | chromosome I | CDS | 318164 | 771 | + | 0.337224 |
| chpI | LIC11192 | ChpI | chromosome I | CDS | 1468396 | 249 | + | 0.325301 |
| dead | LIC13230 | ATP-dependent RNA helicase | chromosome I | CDS | 3965016 | 1566 | + | 0.386335 |
| glcK | LIC12312 | glucokinase | chromosome I | CDS | 2787547 | 897 | + | 0.397993 |
| hepA | LIC13220 | ATP-dependent RNA helicase | chromosome I | CDS | 3951011 | 2847 | - | 0.354759 |
| hrcA | LIC10526 | heat-inducible transcriptional repressor | chromosome I | CDS | 634486 | 1029 | - | 0.373178 |
| kdpE | LIC10994 | response regulator | chromosome I | CDS | 1210408 | 684 | + | 0.390351 |
| lexA | LIC12305 | transcriptional repressor (LexA family) | chromosome I | CDS | 2779574 | 621 | - | 0.415459 |
| mfd | LIC11455 | transcription-repair coupling factor | chromosome I | CDS | 1792408 | 3561 | + | 0.364504 |
| nusA | LIC12706 | NusA | chromosome I | CDS | 3292762 | 1383 | - | 0.416486 |
| nusB | LIC10404 | transcription termination factor | chromosome I | CDS | 460402 | 381 | + | 0.370079 |
| nusG | LIC10748 | transcription antitermination protein | chromosome I | CDS | 909280 | 546 | + | 0.382784 |
| parB | LIC13488 | ParB | chromosome I | CDS | 4262984 | 876 | - | 0.360731 |
| recG | LIC11791 | ATP-dependent DNA helicase | chromosome I | CDS | 2182516 | 1710 | - | 0.384211 |
| rhlE | LIC10738 | ATP-dependent RNA helicase | chromosome I | CDS | 899573 | 1623 | + | 0.378928 |
| rho | LIC12636 | Rho | chromosome I | CDS | 3195007 | 1449 | + | 0.429262 |
| rnC | LIC20066 | dsRNase III | chromosome II | CDS | 72207 | 744 | + | 0.350806 |
| rnR | LIC10035 | ribonuclease R | chromosome I | CDS | 41921 | 2256 | + | 0.326684 |
| rpoA | LIC12846 | DNA-directed RNA polymerase alpha chain | chromosome I | CDS | 3455526 | 978 | - | 0.399796 |
| rpoB | LIC10753 | RNA polymerase beta subunit | chromosome I | CDS | 912196 | 3681 | + | 0.446618 |
| rpoC | LIC10754 | DNA-directed RNA polymerase beta' chain protein | chromosome I | CDS | 915880 | 4215 | + | 0.455042 |
| rpoD | LIC11701 | RNA polymerase sigma-70 factor | chromosome I | CDS | 2067509 | 1758 | - | 0.382821 |
| rpoN | LIC11545 | RNA polymerase sigma-54 factor | chromosome I | CDS | 1907249 | 1422 | + | 0.35865 |
| wecD | LIC13189 | acetyltransferase | chromosome I | CDS | 3903152 | 456 | - | 0.324561 |
| yoaA | LIC12019 | ATP-dependent helicase | chromosome I | CDS | 2432866 | 1977 | + | 0.371775 |
|
Beutenbergstraße 11 D-07745 Jena • Germany |
Phone: +49 3641 65-6000 Fax: +49 3641 65-6351 |
E-mail: info@leibniz-fli.de www.leibniz-fli.de |
Data Privacy Imprint |
|