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2024-05-03 16:59:14

Gene list

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COG category: Transcription
Organism: Leifsonia xyli subsp. xyli str. CTCB07, CTCB07

Number of genes found: 166

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Leifsonia xyli subsp. xyli str. CTCB07, CTCB07
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA Lxx08300 conserved hypothetical proteinchromosome CDS835324 1029 + 0.688047
NA Lxx07247 transcriptional regulator, TetR familychromosome CDS727347 300 - 0.566667
NA Lxx11890 regulatory protein, Sir2 familychromosome CDS1222524 852 - 0.699531
NA Lxx10730 transcriptional regulator, GntR familychromosome CDS1094906 1350 - 0.721482
NA Lxx17400 acetyltransferasechromosome CDS1806370 633 - 0.709321
NA Lxx18980 two-component system, regulatory proteinchromosome CDS1957193 654 + 0.659021
NA Lxx23040 transcriptional regulator, LacI familychromosome CDS2374040 1035 + 0.722705
NA Lxx18120 two-component system, regulatory proteinchromosome CDS1874959 660 - 0.742424
NA Lxx13380 hypothetical proteinchromosome CDS1389366 204 - 0.642157
NA Lxx19550 two-component system, regulatory proteinchromosome CDS2012529 672 - 0.712798
NA Lxx13930 hypothetical proteinchromosome CDS1441644 357 + 0.67507
NA Lxx18470 RNA polymerase sigma factorchromosome CDS1907088 579 - 0.673575
NA Lxx05935 transcriptional regulator, ArsR familychromosome CDS603865 1212 - 0.622112
NA Lxx08980 transcriptional regulator, TetR familychromosome CDS915251 606 + 0.734323
NA Lxx01410 conserved hypothetical proteinchromosome CDS139277 1677 + 0.6935
NA Lxx07920 acetyltransferasechromosome CDS799331 426 - 0.680751
NA Lxx15885 transcriptional regulator, GntR familychromosome CDS1652831 675 - 0.641481
NA Lxx09610 two-component system, regulatory proteinchromosome CDS984350 612 + 0.707516
NA Lxx16190 transcriptional regulator, TetR familychromosome CDS1682280 585 + 0.664957
NA Lxx08310 transcriptional regulator, DeoR familychromosome CDS836366 954 + 0.680294
NA Lxx07500 two-component system, regulatory proteinchromosome CDS751191 639 - 0.740219
NA Lxx16460 transcriptional regulator, TetR familychromosome CDS1714650 576 + 0.65625
NA Lxx09210 conserved hypothetical proteinchromosome CDS938373 231 - 0.683983
NA Lxx08700 transcriptional regulator, PadR familychromosome CDS878637 588 - 0.714286
NA Lxx21140 two-component system, response regulatorchromosome CDS2170576 645 + 0.685271
NA Lxx21890 transcriptional regulator, LuxR familychromosome CDS2255009 2517 + 0.711959
NA Lxx15490 conserved hypothetical proteinchromosome CDS1616396 603 - 0.666667
NA Lxx21940 transcriptional regulator, TetR familychromosome CDS2263058 618 - 0.762136
NA Lxx12310 conserved hypothetical proteinchromosome CDS1279574 366 - 0.666667
NA Lxx02550 transcriptional regulator, LysR familychromosome CDS254029 891 - 0.720539
NA Lxx23870 phage repressor proteinchromosome CDS2451127 309 - 0.608414
NA Lxx12240 transcriptional regulator, TetR familychromosome CDS1274339 657 + 0.683409
NA Lxx18260 transcriptional regulator, CarD-like regulatorchromosome CDS1889205 483 - 0.623188
NA Lxx13405 transcriptional regulator, ArsR familychromosome CDS1391070 369 - 0.696477
NA Lxx19310 sugar kinasechromosome CDS1992037 873 + 0.752577
NA Lxx07140 conserved hypothetical proteinchromosome CDS715468 261 + 0.659004
NA Lxx00510 transcriptional regulator, ROK familychromosome CDS51946 1284 + 0.694704
NA Lxx16050 conserved hypothetical proteinchromosome CDS1669322 312 - 0.634615
NA Lxx09812 conserved hypothetical proteinchromosome CDS1003098 312 + 0.599359
NA Lxx19030 serine/threonine kinasechromosome CDS1964172 1191 + 0.723762
NA Lxx21210 hypothetcial proteinchromosome CDS2179736 2511 + 0.698527
NA Lxx07960 transcriptional regulator, TetR familychromosome CDS803870 750 + 0.708
NA Lxx03120 two-component system, regulatory proteinchromosome CDS310610 816 + 0.643382
NA Lxx12870 transcriptional regulator, LysR familychromosome CDS1338395 855 - 0.679532
NA Lxx02350 membrane proteinchromosome CDS233968 1254 - 0.669856
NA Lxx22150 transcriptional regulator, IclR familychromosome CDS2287423 756 - 0.732804
NA Lxx01640 transcriptional regulator, DNA binding domainchromosome CDS162235 702 - 0.712251
NA Lxx02630 transcriptional regulator, RpiR familychromosome CDS268033 870 + 0.683908
NA Lxx11930 conserved hypothetical proteinchromosome CDS1231426 1788 + 0.704698
NA Lxx06590 transcriptional regulator, DeoR familychromosome CDS656847 786 + 0.720102
NA Lxx23300 transcriptional regulator, TetR familychromosome CDS2397279 678 + 0.735988
NA Lxx17130 transcriptional regulator, LacI familychromosome CDS1775759 1035 - 0.696618
NA Lxx24260 transcriptional regulator, GntR familychromosome CDS2485248 759 + 0.674572
NA Lxx18000 conserved hypothetical proteinchromosome CDS1865876 234 + 0.611111
NA Lxx03030 transcriptional regulator, ROK familychromosome CDS302466 1194 - 0.717755
NA Lxx05700 conserved hypothetical proteinchromosome CDS580443 615 + 0.699187
NA Lxx24540 transcriptional regulator, TetR familychromosome CDS2514677 591 + 0.675127
NA Lxx02080 transcriptional regulator, MarR familychromosome CDS203671 447 + 0.671141
NA Lxx19370 hypothetical proteinchromosome CDS1996912 261 + 0.67433
NA Lxx07580 transcriptional regulator, LysR familychromosome CDS757483 756 - 0.698413
NA Lxx07490 ATP-dependent RNA helicasechromosome CDS748683 2166 + 0.683287
NA Lxx04290 transcription regulatorchromosome CDS432251 240 - 0.616667
NA Lxx18220 two-component system, regulatory proteinchromosome CDS1884840 624 + 0.690705
NA Lxx18550 transcriptional regulator, DeoR familychromosome CDS1913745 846 - 0.700946
NA Lxx19990 conserved hypothetical proteinchromosome CDS2060928 351 + 0.669516
NA Lxx17880 iron-dependent repressor, DxtR metalloregulatory familychromosome CDS1853631 702 - 0.673789
NA Lxx21060 hypothetical proteinchromosome CDS2159099 1920 - 0.709375
NA Lxx14540 two-component system, regulatory proteinchromosome CDS1509765 672 - 0.696429
NA Lxx03170 hypothetical proteinchromosome CDS315454 114 - 0.72807
NA Lxx15640 transcriptional regulator, MarR familychromosome CDS1627121 507 + 0.688363
NA Lxx22490 two-component system, regulatory proteinchromosome CDS2320635 657 - 0.666667
NA Lxx09445 transcriptional regulator, MarR familychromosome CDS967349 465 - 0.686022
NA Lxx15500 conserved hypothetical proteinchromosome CDS1617075 693 - 0.701299
NA Lxx00470 transcriptional regulator, GntR familychromosome CDS49110 642 + 0.685358
NA Lxx15670 RNA polymerase, sigma-70 family factorchromosome CDS1629861 927 - 0.660194
NA Lxx02100 transcriptional regulator, TetR familychromosome CDS206573 594 + 0.622896
NA Lxx21680 RNA polymerase, sigma-70 factor, ECF subfamilychromosome CDS2231243 651 - 0.706605
NA Lxx00760 two-component system, response regulatorchromosome CDS73920 624 - 0.701923
NA Lxx19350 transcriptional regulator, DeoR familychromosome CDS1994678 786 + 0.695929
NA Lxx21880 transcriptional regulator, MarR familychromosome CDS2253904 465 - 0.709677
NA Lxx09410 transcriptional regulator, MarR familychromosome CDS964467 489 + 0.674847
NA Lxx23120 transcriptional regulator, TetR familychromosome CDS2380964 627 + 0.717703
NA Lxx00620 transcriptional regulator, IclR familychromosome CDS62595 789 + 0.714829
NA Lxx12040 serine/threonine kinasechromosome CDS1245154 1416 + 0.673729
NA Lxx08452 conserved hypothetical proteinchromosome CDS853644 339 - 0.666667
NA Lxx04100 transcriptional regulator, TetR familychromosome CDS413324 741 + 0.68556
NA Lxx14860 conserved hypothetical proteinchromosome CDS1545904 633 + 0.699842
NA Lxx14110 transcriptional regulator, LacI familychromosome CDS1459308 1005 + 0.724378
NA Lxx22820 conserved hypothetical proteinchromosome CDS2356872 585 - 0.682051
NA Lxx21230 transcriptional regulator, LuxR familychromosome CDS2183074 2538 - 0.737983
NA Lxx22900 hypothetical proteinchromosome CDS2364864 360 - 0.705556
NA Lxx20000 conserved hypothetical proteinchromosome CDS2061331 327 + 0.66055
NA Lxx00460 transcriptional regulator, GntR familychromosome CDS48277 714 - 0.682073
NA Lxx10290 transcriptional regulatorchromosome CDS1052523 555 + 0.695495
NA Lxx18030 conserved hypothetical proteinchromosome CDS1869204 288 - 0.680556
NA Lxx14030 conserved hypothetical proteinchromosome CDS1452930 507 + 0.621302
NA Lxx07910 acetyltransferasechromosome CDS798821 471 - 0.647558
NA Lxx06740 transcriptional regulator, ROK familychromosome CDS670004 1188 + 0.717172
NA Lxx15110 conserved hypothetical proteinchromosome CDS1572475 474 - 0.675106
arsR Lxx01750 transcriptional regulator, ArsR familychromosome CDS171313 423 + 0.666667
asnC Lxx11990 transcriptional regulator, AsnC familychromosome CDS1239410 483 - 0.63354
aspC Lxx09910 aspartate transaminasechromosome CDS1012977 1290 - 0.703101
avtA Lxx25240 valine-pyruvate aminotransferasechromosome CDS2576529 1323 + 0.639456
chiR Lxx08730 two-component system, regulatory proteinchromosome CDS881967 678 - 0.696165
cpsA Lxx20850 transcriptional regulator, LytR familychromosome CDS2140969 1647 + 0.71099
csp Lxx18020 cold-shock proteinchromosome CDS1868814 219 - 0.561644
cspA Lxx24460 cold shock proteinchromosome CDS2506507 204 - 0.602941
cspA Lxx22400 cold shock proteinchromosome CDS2312601 222 + 0.603604
cspB Lxx17920 cold shock proteinchromosome CDS1856417 381 - 0.666667
cutR Lxx18780 two-component system, regulatory proteinchromosome CDS1939695 663 - 0.689291
cutR Lxx22010 two-component system, regulatory proteinchromosome CDS2270929 666 - 0.689189
deaD Lxx13450 ATP-dependent RNA helicasechromosome CDS1396913 1770 - 0.692655
deaD Lxx22100 ATP-dependent RNA helicasechromosome CDS2280433 1200 - 0.700833
fliA Lxx06230 RNA polymerase, sigma factorchromosome CDS632192 819 + 0.669109
glk Lxx09960 glucokinasechromosome CDS1018467 753 - 0.673307
glkA Lxx15430 glucokinasechromosome CDS1607016 864 - 0.725694
glnR Lxx18370 transcriptional regulator, GlnR familychromosome CDS1898247 705 + 0.670922
gntR Lxx06620 transcriptional regulator, GntR familychromosome CDS661171 684 + 0.668129
gntR Lxx25130 transcriptional regulator, GntR familychromosome CDS2564642 666 + 0.671171
gntR Lxx01790 transcriptional regulator, GntR familychromosome CDS172964 690 - 0.65942
gntR Lxx23620 transcriptional regulator, GntR familychromosome CDS2423946 972 - 0.685185
gntR Lxx01800 transcriptional regulator, GntR familychromosome CDS173665 675 - 0.641481
greA Lxx16890 transcription elongation factorchromosome CDS1753584 492 + 0.672764
hipB Lxx04230 transcriptional regulatorchromosome CDS424253 1455 - 0.705155
hrcA Lxx14650 transcriptional regulator, HrcA familychromosome CDS1520395 1020 - 0.676471
hrdB Lxx10190 RNA polymerase, sigma-70 family factorchromosome CDS1043578 1323 + 0.673469
hspR Lxx23750 heat shock proteinchromosome CDS2438828 414 - 0.681159
lexA Lxx15880 SOS response regulatorchromosome CDS1652082 675 + 0.66963
lysR Lxx24650 transcriptional regulator, LysR familychromosome CDS2522626 918 - 0.764706
lytR Lxx20960 transcriptional regulator, LytR familychromosome CDS2151041 1287 + 0.696193
lytR Lxx08150 transcriptional regulator, LytR familychromosome CDS821921 1302 + 0.652074
marR Lxx02710 transcriptional regulator, MarR familychromosome CDS274959 288 - 0.739583
marR Lxx17450 transcriptional regulator, MarR familychromosome CDS1811031 519 + 0.714836
mfd Lxx17280 transcription-repair coupling factorchromosome CDS1791299 3615 - 0.690733
mtrA Lxx05350 two-component system, regulatory proteinchromosome CDS537390 684 + 0.668129
nusA Lxx07130 transcription termination/antitermination factorchromosome CDS714416 999 + 0.667668
nusB Lxx11010 transcription termination factorchromosome CDS1123233 435 + 0.68046
nusG Lxx02900 transcription antitermination factorchromosome CDS290489 948 + 0.648734
parB Lxx25247 chromosome partitioning proteinchromosome CDS2578843 960 - 0.596875
phoP Lxx17970 two-component system, regulatory proteinchromosome CDS1862665 702 + 0.646724
pknA Lxx00220 serine/threonine kinasechromosome CDS21267 1722 - 0.678281
pknB Lxx00210 serine/threonine kinasechromosome CDS19497 1698 - 0.6649
pknK Lxx24920 serine/threonine kinasechromosome CDS2541873 2925 - 0.727521
purR Lxx23580 transcriptional regulator, LacI familychromosome CDS2420899 1032 + 0.714147
recG Lxx09750 ATP-dependent DNA helicase RecGchromosome CDS997029 2220 + 0.711712
regX3 Lxx18280 two-component system, regulatory proteinchromosome CDS1890394 684 - 0.668129
relA Lxx10830 GTP pyrophosphokinasechromosome CDS1104647 2277 + 0.648661
rhlE Lxx09180 ATP-dependent RNA helicasechromosome CDS935641 1476 - 0.687669
rhlE Lxx20780 ATP-dependent RNA helicasechromosome CDS2133858 1596 + 0.739975
rho Lxx06900 transcription termination factorchromosome CDS690967 2139 + 0.690977
rnc Lxx09780 ribonuclease IIIchromosome CDS1000822 714 + 0.680672
rpoA Lxx20080 DNA-directed RNA polymerase, alpha subunitchromosome CDS2068700 1080 - 0.64537
rpoB Lxx20640 DNA-directed RNA polymerase, beta subunitchromosome CDS2115985 3498 - 0.65952
rpoC Lxx20630 DNA-directed RNA polymerase, beta subunitchromosome CDS2112062 3876 - 0.670795
rpoZ Lxx11130 DNA-directed RNA polymerase, omega subunitchromosome CDS1140558 264 + 0.609848
scG Lxx13330 transcriptional regulator, ROK familychromosome CDS1385130 1254 - 0.710526
scrK Lxx01600 fructokinasechromosome CDS157358 885 - 0.723164
sigH Lxx19190 RNA polymerase, sigma-70 factor, ECF subfamilychromosome CDS1979210 732 - 0.65847
sirR Lxx03210 iron-dependant repressor, DtxR metalloregulatory familychromosome CDS318947 669 - 0.724963
sorC Lxx07300 transcriptional regulator, sugar-binding familychromosome CDS732087 1221 + 0.709255
speG Lxx19500 spermidine acetyltransferasechromosome CDS2009461 453 + 0.668874
tcrA Lxx02580 two-component system, regulatory proteinchromosome CDS260176 723 - 0.6639
tetR Lxx20890 transcriptional regulator, TetR familychromosome CDS2143212 612 - 0.714052
tetR Lxx19580 transcriptional regulator, TetR familychromosome CDS2014174 570 - 0.65614
xpbC Lxx17950 DNA repair helicasechromosome CDS1859018 1641 + 0.700792
yhfR Lxx07230 transcriptional regulator, GntR familychromosome CDS724966 765 - 0.705882