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2024-05-03 12:27:34

Gene list

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COG category: Transcription
Organism: Staphylococcus epidermidis ATCC 12228, ATCC 12228

Number of genes found: 151

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Staphylococcus epidermidis ATCC 12228, ATCC 12228
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA SE1369 alkaline phosphatase synthesis transcriptional regulatory proteinchromosome CDS1400532 711 - 0.326301
NA SE1245 ATP-dependent RNA helicasechromosome CDS1274433 1347 - 0.310319
NA SE1308 conserved hypothetical proteinchromosome CDS1336752 423 - 0.338061
NA SE1176 staphylococcal respiratory response protein SrrAchromosome CDS1213658 726 - 0.359504
NA SE1315 GTP pyrophosphokinasechromosome CDS1344926 2190 - 0.332877
NA SE_p501 conserved hypothetical proteinpSE-12228-05 CDS195 255 - 0.258824
NA SE1201 arginine repressorchromosome CDS1239524 462 - 0.320346
NA SE1380 conserved hypothetical proteinchromosome CDS1416630 1299 - 0.310239
NA SE1409 catabolite control protein Achromosome CDS1447466 945 - 0.32381
NA SE1293 transcription elongation factorchromosome CDS1321018 477 - 0.327044
NA SE1205 transcription termination factorchromosome CDS1242725 390 - 0.287179
NA SE1435 repressor of toxins Rotchromosome CDS1487251 300 - 0.266667
NA SE_p507 bla regulator protein blaR1pSE-12228-05 CDS8213 1758 + 0.261092
NA SE1269 Heat-inducible transcriptional repressorchromosome CDS1298974 978 - 0.306748
NA SE1248 RNA polymerase sigma factorchromosome CDS1277748 1107 - 0.344173
NA SE1233 glucokinasechromosome CDS1264107 987 - 0.344478
NA SE1178 conserved hypothetical proteinchromosome CDS1215247 543 - 0.314917
NA SE1360 conserved hypothetical proteinchromosome CDS1391536 471 - 0.341826
NA SE1190 transcription regulator AraC/XylS familychromosome CDS1225232 891 + 0.332211
NA SE_p508 penicillinase repressorpSE-12228-05 CDS9960 381 + 0.257218
NA SE_p504 conserved hypothetical proteinpSE-12228-05 CDS4385 324 + 0.305556
NA SE1446 conserved hypothetical proteinchromosome CDS1497741 480 + 0.272917
NA SE_p515 hypothetical proteinpSE-12228-05 CDS18028 663 + 0.346908
NA SE_p502 conserved hypothetical proteinpSE-12228-05 CDS509 1719 + 0.283886
NA SE_p609 hypothetical proteinpSE-12228-06 CDS5297 612 - 0.28268
SE0018 response regulatorchromosome CDS24901 702 + 0.361823
SE0041 Abi-alpha proteinchromosome CDS49457 1155 + 0.285714
SE0073 cadmium efflux system accesory proteinchromosome CDS71924 189 + 0.386243
SE0081 conserved hypothetical proteinchromosome CDS83283 408 + 0.404412
SE0093 transcriptional regulator tetR-familychromosome CDS91329 546 - 0.250916
SE0107 arginine repressorchromosome CDS103740 447 - 0.252796
SE0120 response regulatorchromosome CDS114705 669 + 0.273543
SE0136 arsenical resistance operon repressorchromosome CDS130017 315 - 0.307937
SE0139 arsenical resistance operon repressor-like proteinchromosome CDS133060 321 + 0.258567
SE0218 transcriptional regulatorchromosome CDS209357 540 + 0.361111
SE0284 ctsR proteinchromosome CDS282683 462 + 0.318182
SE0296 conserved hypothetical proteinchromosome CDS296172 576 + 0.296875
SE0299 transcription antitermination proteinchromosome CDS297270 549 + 0.357013
SE0306 RNA polymerase beta chainchromosome CDS301678 3552 + 0.377252
SE0307 RNA polymerase beta-prime chainchromosome CDS305361 3624 + 0.366998
SE0366 conserved hypothetical proteinchromosome CDS364567 423 - 0.307329
SE0368 conserved hypothetical proteinchromosome CDS366700 477 + 0.324948
SE0382 transcriptional regulatorchromosome CDS378599 753 + 0.285525
SE0390 staphylococcal accessory regulator Achromosome CDS386306 375 - 0.261333
SE0408 iron dependent repressorchromosome CDS402541 645 + 0.310078
SE0425 conserved hypothetical proteinchromosome CDS420807 507 - 0.331361
SE0427 two-component response regulatorchromosome CDS422364 675 + 0.30963
SE0435 AraC/XylS family transcriptional regulatorchromosome CDS431347 2175 + 0.271724
SE0436 conserved hypothetical proteinchromosome CDS433627 369 + 0.249322
SE0443 LysR family transcriptional regulatorchromosome CDS439037 669 + 0.327354
SE0457 transcriptional regulatorchromosome CDS451775 444 - 0.335586
SE0470 transcription repressor of fructose operonchromosome CDS462137 759 + 0.329381
SE0479 response regulatorchromosome CDS472390 690 - 0.326087
SE0556 glycolytic operon regulatorchromosome CDS552290 1014 + 0.374753
SE0565 ribonuclease Rchromosome CDS561606 2379 + 0.348045
SE0578 cold-shock protein Cchromosome CDS576298 201 + 0.383085
SE0588 lactococcal prophage ps3 protein 05chromosome CDS582200 501 - 0.271457
SE0708 hypothetical proteinchromosome CDS698893 102 + 0.303922
SE0731 competence transcription factorchromosome CDS719885 576 + 0.314236
SE0740 conserved hypothetical proteinchromosome CDS724995 558 + 0.340502
SE0749 ATL autolysin transcription regulatorchromosome CDS734476 420 + 0.302381
SE0751 conserved hypothetical proteinchromosome CDS739383 423 - 0.312057
SE0753 conserved hypothetical proteinchromosome CDS741062 1080 - 0.310185
SE0796 conserved hypothetical proteinchromosome CDS788650 540 + 0.298148
SE0851 conserved hypothetical proteinchromosome CDS843681 441 - 0.312925
SE0884 fibrinogen binding proteinchromosome CDS879215 1698 - 0.332744
SE0886 DNA-directed RNA polymerase subunit omegachromosome CDS881805 213 + 0.366197
SE0902 ATP-dependent DNA helicasechromosome CDS898608 2049 + 0.332845
SE0908 RNase IIIchromosome CDS904521 738 + 0.331978
SE0931 transcription pleiotropic repressor codYchromosome CDS932757 774 + 0.319121
SE0942 transcription termination-antitermination factorchromosome CDS947387 1224 + 0.354575
SE0943 conserved hypothetical proteinchromosome CDS948628 285 + 0.308772
SE0954 transcription regulator GntR familychromosome CDS961420 714 + 0.317927
SE0958 conserved hypothetical proteinchromosome CDS965578 828 + 0.332126
SE0976 glycerol uptake operon antiterminator regulatory proteinchromosome CDS985139 534 + 0.316479
SE0986 glutamine synthetase repressorchromosome CDS996511 366 + 0.336066
SE1002 two-component response regulatorchromosome CDS1008355 603 + 0.321725
SE1022 lexa repressorchromosome CDS1026429 234 - 0.307692
SE1039 transcription antiterminatorchromosome CDS1049142 849 + 0.282686
SE1043 peptide methionine sulfoxide reductase regulator MsrRchromosome CDS1054974 990 + 0.332323
SE1086 major cold shock protein CspAchromosome CDS1097883 201 - 0.373134
SE1100 putative response regulator ArlRchromosome CDS1112731 660 - 0.325758
SE1102 lactose phosphotransferase system repressorchromosome CDS1113949 768 - 0.358073
SE1111 conserved hypothetical proteinchromosome CDS1123628 504 - 0.323413
SE1139 conserved hypothetical proteinchromosome CDS1178212 333 - 0.276276
SE1143 dinG proteinchromosome CDS1181390 2709 - 0.29199
SE1528 conserved hypothetical proteinchromosome CDS1577786 465 - 0.31828
SE1529 two-component response regulator-like proteinchromosome CDS1578521 624 - 0.315705
SE1569 two-component response regulatorchromosome CDS1622025 630 - 0.338095
SE1606 penicillinase repressorchromosome CDS1661974 381 - 0.233596
SE1607 bla regulator protein blaR1chromosome CDS1662344 1758 - 0.248009
SE1625 transcription regulator GntR familychromosome CDS1678986 378 - 0.298942
SE1635 accessory gene regulator Bchromosome CDS1689824 585 + 0.282051
SE1638 accessory gene regulator Achromosome CDS1691865 717 + 0.299861
SE1642 sucrose operon repressorchromosome CDS1695347 144 - 0.270833
SE1643 sucrose operon repressorchromosome CDS1695700 600 - 0.338333
SE1667 conserved hypothetical proteinchromosome CDS1725343 2151 - 0.317527
SE1668 sigma factor Bchromosome CDS1727781 771 - 0.341115
SE1671 sigmaB regulation protein RsbUchromosome CDS1729433 1002 - 0.327345
SE1673 conserved hypothetical proteinchromosome CDS1731138 171 - 0.333333
SE1679 ATP-dependent RNA helicasechromosome CDS1735734 1530 - 0.352941
SE1693 trasncriptional activator TenAchromosome CDS1748292 690 - 0.331884
SE1719 transcription termination factorchromosome CDS1769397 1317 - 0.352316
SE1726 DNA-directed RNA polymerase subunit deltachromosome CDS1779819 537 - 0.325885
SE1727 spermine/spermidine acetyltransferase bltchromosome CDS1780466 861 - 0.303136
SE1746 repressor proteinchromosome CDS1796774 363 + 0.31405
SE1788 lactose phosphotransferase system repressorchromosome CDS1846707 756 - 0.306878
SE1789 regulatory protein SIR2 familychromosome CDS1847762 741 + 0.329285
SE1797 DNA-directed RNA polymerase alpha chainchromosome CDS1853859 945 - 0.334392
SE1836 conserved hypothetical proteinchromosome CDS1880713 762 - 0.318898
SE1837 transcription regulator MarR familychromosome CDS1881646 432 + 0.3125
SE1840 conserved hypothetical proteinchromosome CDS1884136 351 - 0.296296
SE1866 urease accessory protein UreGchromosome CDS1903450 615 + 0.35935
SE1868 sarR proteinchromosome CDS1905005 345 - 0.226087
SE1870 conserved hypothetical proteinchromosome CDS1906113 729 - 0.277092
SE1871 transcription regulatorchromosome CDS1906880 1974 - 0.274569
SE1883 lyt divergon expression attenuator LytRchromosome CDS1920041 951 - 0.342797
SE1885 conserved hypothetical proteinchromosome CDS1922423 690 + 0.302899
SE1891 transcription regulator RpiR familychromosome CDS1927991 873 + 0.309278
SE1898 transcriptional regulatorchromosome CDS1935180 762 + 0.2979
SE1923 hypothetical protein predicted by GeneMarkchromosome CDS1956276 321 - 0.361371
SE1934 transcriptional regulatorchromosome CDS1966130 552 + 0.271739
SE1937 TcaR transcription regulatorchromosome CDS1969655 456 - 0.307018
SE1941 two component response regulatorchromosome CDS1973446 675 + 0.308148
SE1949 transcription repressor of sporulation, septation and degradation PaiAchromosome CDS1985747 540 - 0.316667
SE1951 attachment to host cells and virulencechromosome CDS1987583 402 - 0.370647
SE1961 transcription regulatory proteinchromosome CDS1995317 2106 + 0.275404
SE1967 transcriptional regulatorchromosome CDS2001409 447 + 0.286353
SE1969 response regulators of two-component regulatorychromosome CDS2003980 657 - 0.324201
SE1984 conserved hypothetical proteinchromosome CDS2021650 537 - 0.35568
SE2012 two-component response regulatorchromosome CDS2051375 759 + 0.300395
SE2039 conserved hypothetical proteinchromosome CDS2078976 2568 - 0.265187
SE2046 gluconate operon transcriptional repressorchromosome CDS2090150 681 - 0.350954
SE2048 transcriptional regulator MerR familychromosome CDS2092715 717 - 0.32357
SE2106 transcription regulatorchromosome CDS2150033 885 - 0.326554
SE2146 transcription regulatorchromosome CDS2192126 882 - 0.298186
SE2167 conserved hypothetical proteinchromosome CDS2217768 567 + 0.338624
SE2185 transcriptional regulatorchromosome CDS2236412 519 - 0.325626
SE2195 two-component response regulatorchromosome CDS2246537 666 - 0.333333
SE2209 transcriptional regulatorchromosome CDS2261340 447 - 0.324385
SE2218 arginine repressorchromosome CDS2271683 462 - 0.281385
SE2223 conserved hypothetical proteinchromosome CDS2277920 903 + 0.311185
SE2263 transcription regulator GntR familychromosome CDS2331101 1134 + 0.286596
SE2280 transcription-repair coupling factorchromosome CDS2353479 3510 - 0.344444
SE2310 LysR-type transcriptional regulatorchromosome CDS2388481 822 + 0.29562
SE2313 transcription activator of glutamate synthase operonchromosome CDS2395704 882 + 0.325397
SE2378 transcription terminatorchromosome CDS2451467 843 - 0.346382
SE2386 conserved hypothetical proteinchromosome CDS2462847 204 + 0.362745
SE2409 conserved hypothetical proteinchromosome CDS2490718 570 - 0.280702
SE2410 transcriptional regulator AcrR familychromosome CDS2491507 540 - 0.268519
SE2414 DNA-binding protein Spo0J-like proteinchromosome CDS2493182 840 - 0.336905