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2024-05-17 01:16:45

Gene list

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COG category: Transcription
Organism: Aquifex aeolicus VF5, VF5

Number of genes found: 55

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Hide UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Aquifex aeolicus VF5, VF5
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
aa20 putative proteinRecName: Full=Uncharacterized protein aq_aa20; ece1 CDS16475 957 - 0.339603
acrR1 transcriptional regulator (TetR/AcrR family)SubName: Full=Transcriptional regulator (TetR/AcrR family); chromosome CDS732523 540 + 0.377778
acrR2 transcriptional regulator (TetR/AcrR family)SubName: Full=Transcriptional regulator (TetR/AcrR family); chromosome CDS1533662 579 + 0.423143
acrR3 transcriptional regulator (TetR/AcrR family)SubName: Full=Transcriptional regulator (TetR/AcrR family); chromosome CDS183235 540 - 0.411111
aq_1018 putative proteinSubName: Full=Uncharacterized protein; chromosome CDS705653 381 + 0.338583
aq_1324 putative proteinRecName: Full=Uncharacterized protein aq_1324; chromosome CDS938922 579 - 0.481865
aq_1345 putative proteinSubName: Full=Uncharacterized protein; chromosome CDS957037 705 + 0.466667
aq_1482 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1056000 486 - 0.446502
aq_1510 putative proteinSubName: Full=Uncharacterized protein; chromosome CDS1075465 660 - 0.457576
aq_1873 putative proteinRecName: Full=Uncharacterized protein aq_1873; chromosome CDS1321781 1224 + 0.403595
aq_1909 putative proteinRecName: Full=Uncharacterized protein aq_1909; chromosome CDS1344366 930 + 0.41828
aq_1924 putative proteinRecName: Full=Type III pantothenate kinase; EC=2.7.1.33; AltName: Full=PanK-III; AltName: Full=Pantothenic acid kinase; chromosome CDS1354174 690 - 0.407246
aq_2049 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1441129 567 + 0.435626
aq_2056 putative proteinSubName: Full=Uncharacterized protein; chromosome CDS1448156 636 - 0.466981
aq_2164 putative proteinRecName: Full=Uncharacterized protein aq_2164; chromosome CDS1524721 570 - 0.410526
aq_2170 hypothetical proteinRecName: Full=NAD-dependent protein deacylase; EC=3.5.1.-; AltName: Full=Regulatory protein SIR2 homolog; chromosome CDS1528662 720 + 0.493056
aq_2185 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1535687 579 - 0.402418
aq_268 hypothetical proteinRecName: Full=Putative HTH-type transcriptional regulator aq_268; chromosome CDS172848 471 + 0.422505
aq_321 putative proteinSubName: Full=Uncharacterized protein; chromosome CDS208049 597 + 0.40871
aq_324 putative proteinSubName: Full=Uncharacterized protein; chromosome CDS211034 783 + 0.445722
aq_499 putative proteinSubName: Full=Uncharacterized protein; chromosome CDS336232 801 - 0.426966
aq_600 putative proteinSubName: Full=Uncharacterized protein; chromosome CDS409567 483 - 0.440994
aq_601 putative proteinSubName: Full=Uncharacterized protein; chromosome CDS410406 537 + 0.405959
aq_904 putative proteinSubName: Full=Uncharacterized protein; chromosome CDS623622 510 + 0.443137
arsR transcriptional regulator (ArsR family)SubName: Full=Transcriptional regulator (ArsR family); chromosome CDS985792 309 + 0.423948
cspC cold shock proteinRecName: Full=Cold shock-like protein; chromosome CDS922835 213 - 0.441315
deaD ATP-dependent RNA helicase DeaDSubName: Full=ATP-dependent RNA helicase DeaD; chromosome CDS417224 882 - 0.427438
dinG ATP-dependent helicase (DinG family)SubName: Full=ATP-dependent helicase (DinG family); chromosome CDS234590 1929 + 0.424572
flgM anti sigma factor FlgMSubName: Full=Anti sigma factor FlgM; chromosome CDS234260 267 + 0.389513
fliA RNA polymerase sigma factor FliARecName: Full=RNA polymerase sigma factor; chromosome CDS856012 711 + 0.412096
hypB hydrogenase expression/formation protein BSubName: Full=Hydrogenase expression/formation protein B; chromosome CDS456335 780 + 0.461538
iclR transcriptional regulator (IclR family)SubName: Full=Transcriptional regulator (IclR family); chromosome CDS529169 774 - 0.449612
lysR1 transcriptional regulator (LysR family)SubName: Full=Transcriptional regulator (LysR family); chromosome CDS436576 912 - 0.401316
lysR2 transcriptional regulator (LysR family)SubName: Full=Transcriptional regulator (LysR family); chromosome CDS719732 921 + 0.304017
merR transcriptional regulator (MerR family)SubName: Full=Transcriptional regulator (MerR family); chromosome CDS479863 411 - 0.437956
nifA transcriptional regulator (NifA family)SubName: Full=Transcriptional regulator (NifA family); chromosome CDS134585 1521 - 0.412886
ntrC2 transcriptional regulator (NtrC family)SubName: Full=Transcriptional regulator (NtrC family); chromosome CDS1264237 1494 - 0.435074
nusA transcription termination NusASubName: Full=Transcription termination NusA; chromosome CDS165358 1014 - 0.435897
nusB transcription termination NusBRecName: Full=N utilization substance protein B homolog; Short=Protein NusB; chromosome CDS82284 447 + 0.42953
nusG transcription antitermination protein NusGRecName: Full=Transcription termination/antitermination protein NusG; chromosome CDS1358625 747 + 0.440428
phoB transcriptional regulator (PhoB-like)SubName: Full=Transcriptional regulator (PhoB-like); chromosome CDS207352 687 + 0.429403
recG ATP-dependent DNA helicase RecGRecName: Full=ATP-dependent DNA helicase RecG; EC=3.6.4.12; chromosome CDS1442417 2379 - 0.430853
rho transcriptional terminator RhoRecName: Full=Transcription termination factor Rho; EC=3.6.4.-; AltName: Full=ATP-dependent helicase Rho; chromosome CDS603214 1311 + 0.466819
rnc RNase IIIRecName: Full=Ribonuclease 3; EC=3.1.26.3; AltName: Full=Ribonuclease III; Short=RNase III; chromosome CDS652228 666 + 0.375375
rpoA RNA polymerase alpha subunitRecName: Full=DNA-directed RNA polymerase subunit alpha; Short=RNAP subunit alpha; EC=2.7.7.6; AltName: Full=RNA polymerase subunit alpha; AltName: Full=Transcriptase subunit alpha; chromosome CDS44863 954 - 0.429769
rpoB RNA polymerase beta subunitRecName: Full=DNA-directed RNA polymerase subunit beta; Short=RNAP subunit beta; EC=2.7.7.6; AltName: Full=RNA polymerase subunit beta; AltName: Full=Transcriptase subunit beta; chromosome CDS1361772 4407 + 0.472203
rpoC RNA polymerase beta prime subunitRecName: Full=DNA-directed RNA polymerase subunit beta; Short=RNAP subunit beta; EC=2.7.7.6; AltName: Full=RNA polymerase subunit beta; AltName: Full=Transcriptase subunit beta; chromosome CDS1366175 4725 + 0.470476
rpoD RNA polymerase sigma factor RpoDRecName: Full=RNA polymerase sigma factor SigA; chromosome CDS1060369 1728 - 0.439236
rpoN RNA polymerase sigma factor RpoNSubName: Full=RNA polymerase sigma factor RpoN; chromosome CDS408354 1197 + 0.370092
rpoS RNA polymerase sigma factor RpoSRecName: Full=RNA polymerase sigma factor; chromosome CDS1036324 933 + 0.45552
rpoZ RNA polymerase omega subunitRecName: Full=DNA-directed RNA polymerase subunit omega; Short=RNAP omega subunit; EC=2.7.7.6; AltName: Full=RNA polymerase omega subunit; AltName: Full=Transcriptase subunit omega; chromosome CDS113301 231 - 0.445887
spoT (p)ppGpp 3-pyrophosphohydrolaseRecName: Full=Guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase; EC=3.1.7.2; AltName: Full=Penta-phosphate guanosine-3-pyrophosphohydrolase; Short=(ppGpp)ase; chromosome CDS581303 2091 - 0.433286
stpK ser/thr protein kinaseSubName: Full=Ser/thr protein kinase; chromosome CDS392044 816 - 0.447304
vacB VacB protein (ribonuclease II family)RecName: Full=Ribonuclease R; Short=RNase R; EC=3.1.13.1; AltName: Full=VacB protein homolog; chromosome CDS1438996 2118 + 0.467894
xylR transcriptional regulator (NagC/XylR family)SubName: Full=Transcriptional regulator (NagC/XylR family); chromosome CDS1064736 861 - 0.430894