TitleGenColors Logo
spacer
Home spacerGenomes
spacerMethods
spacerDocumentation spacerContactspacer spacerLeibniz FLI
spacer
QuickSearch
2024-05-03 17:53:27

Gene list

Applied filters:

COG category: Transcription
Organism: Clostridium tetani E88, Massachusetts

Number of genes found: 165

Free access
Sort by:

 

Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Clostridium tetani E88, Massachusetts
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA CTC00610 accessory gene regulator protein Achromosome CDS635981 336 + 0.199405
NA CTC00665 RNA polymerase sigma factorchromosome CDS683258 597 + 0.242881
NA CTC00597 two-component response regulatorchromosome CDS621634 705 + 0.286525
NA CTC00707 transcriptional regulatory proteinchromosome CDS728778 1704 + 0.286385
NA CTC00684 transcriptional regulatory proteinchromosome CDS701022 1446 + 0.278008
NA CTC00848 transcriptional regulatory proteinchromosome CDS900528 693 + 0.27417
NA CTC00630 transcriptional regulatorchromosome CDS649700 978 + 0.381391
NA CTC00618 RNA polymerase sigma factorchromosome CDS640869 507 - 0.291913
NA CTC00608 RNA polymerase sigma factorchromosome CDS632753 567 - 0.250441
NA CTC00639 transcriptional regulatory proteinchromosome CDS658267 984 + 0.34248
NA CTC00657 DNA/RNA helicasechromosome CDS673859 2493 + 0.251504
NA CTC00805 two-component response regulatorchromosome CDS849627 702 + 0.277778
NA CTC00704 conserved proteinchromosome CDS726473 990 + 0.238384
NA CTC00643 putative acetyltransferasechromosome CDS662958 519 + 0.287091
CTC00072 signal-transduction and transcriptional-control proteinchromosome CDS17824 1758 - 0.274744
CTC00101 stage 0 sporulation protein Jchromosome CDS59273 816 + 0.258578
CTC00109 conserved proteinchromosome CDS66688 318 + 0.283019
CTC00144 acetyltransferasechromosome CDS102883 468 + 0.294872
CTC00153 transcriptional regulatory proteinchromosome CDS110388 882 - 0.269841
CTC00163 transcriptional regulatory proteinchromosome CDS118508 717 - 0.27894
CTC00173 predicted transcriptional regulatorchromosome CDS128258 660 + 0.239394
CTC00189 transcriptional regulatory proteinchromosome CDS144984 741 + 0.304993
CTC00194 transcription-repair coupling factorchromosome CDS149078 3093 + 0.293243
CTC00196 stage V sporulation protein Tchromosome CDS153345 552 + 0.315217
CTC00201 stage II sporulation protein Echromosome CDS160179 2397 + 0.277013
CTC00207 putative transcriptional regulatorchromosome CDS167196 789 + 0.325729
CTC00216 regulatory protein, sir2 familychromosome CDS181997 744 + 0.293011
CTC00230 transcriptional repressorchromosome CDS197483 954 + 0.301887
CTC00263 predicted catabolite control protein Achromosome CDS234852 999 + 0.278278
CTC00273 spore coat proteinchromosome CDS249564 1014 + 0.282051
CTC00277 transcriptional regulatory proteinchromosome CDS254876 1953 + 0.258065
CTC00296 transcription termination factor Rhochromosome CDS279777 1500 + 0.302
CTC00330 transcription accessory proteinchromosome CDS315916 2157 + 0.303663
CTC00377 putative central glycolytic genes regulatorchromosome CDS366471 1029 + 0.289602
CTC00384 exoribonuclease IIchromosome CDS376266 2127 + 0.294311
CTC00392 two-component response regulatorchromosome CDS385961 696 + 0.268678
CTC00399 transcriptional regulatory proteinchromosome CDS392204 891 - 0.289562
CTC00424 transcriptional regulatorchromosome CDS420325 447 + 0.284116
CTC00452 iron-dependent transcriptional repressorchromosome CDS450561 483 + 0.258799
CTC00480 conserved proteinchromosome CDS485612 528 + 0.293561
CTC00483 transcriptional regulatorchromosome CDS488995 456 + 0.263158
CTC00532 conserved proteinchromosome CDS544754 993 + 0.240685
CTC00553 RNA polymerase sigma factorchromosome CDS573257 591 + 0.296108
CTC00556 signal-transduction and transcriptional-control proteinchromosome CDS574841 1731 - 0.275563
CTC00575 conserved protein (RRF2 family protein)chromosome CDS596860 417 + 0.282974
CTC00872 two-component response regulatorchromosome CDS926067 687 + 0.275109
CTC00904 ribose operon repressorchromosome CDS957857 1032 + 0.306202
CTC00913 transcriptional regulatory proteinchromosome CDS966686 1005 + 0.232836
CTC00922 putative transcriptional regulatorchromosome CDS979108 381 + 0.291339
CTC00943 transcriptional regulatory proteinchromosome CDS1006326 966 + 0.295031
CTC00971 transcriptional regulator, putative pyruvate dehydrogenase complex repressorchromosome CDS1037992 696 + 0.29023
CTC01049 RRF2 protein familychromosome CDS1118697 435 + 0.310345
CTC01066 RNA polymerase sigma factorchromosome CDS1137516 549 + 0.284153
CTC01070 DNA-binding proteinchromosome CDS1140732 453 - 0.298013
CTC01082 hypothetical proteinchromosome CDS1150270 312 + 0.307692
CTC01097 conserved proteinchromosome CDS1164712 465 + 0.329032
CTC01126 RNA polymerase sigma-E factorchromosome CDS1192207 786 + 0.260814
CTC01128 RNA polymerase sigma-G factorchromosome CDS1193354 486 + 0.3107
CTC01129 4-hydroxybenzoate octaprenyltransferasechromosome CDS1194289 474 + 0.293249
CTC01130 transcriptional regulatory proteinchromosome CDS1195145 699 + 0.288984
CTC01177 transcriptional regulatory proteinchromosome CDS1256470 891 - 0.272727
CTC01188 acetyltransferasechromosome CDS1270573 498 - 0.295181
CTC01212 transcriptional regulatory proteinchromosome CDS1298852 912 + 0.253289
CTC01243 ribonuclease IIIchromosome CDS1331154 708 + 0.266949
CTC01244 oxygen-independent coproporphyrinogen III oxidasechromosome CDS1331854 1056 + 0.286932
CTC01273 N utilization substance protein Achromosome CDS1365613 1086 + 0.301105
CTC01344 RRF2 family proteinchromosome CDS1448369 447 - 0.257271
CTC01368 mitochondrial ATP-dependent RNA helicase suv3 precursorchromosome CDS1474665 1782 - 0.275533
CTC01391 transcriptional regulatory proteinchromosome CDS1503259 771 + 0.255512
CTC01411 transcriptional regulatory proteinchromosome CDS1523253 990 - 0.29596
CTC01421 transcriptional regulatory component of sensory transduction systemchromosome CDS1533553 693 - 0.290043
CTC01432 transcriptional regulatory proteinchromosome CDS1546799 888 + 0.322072
CTC01433 putative RNA polymerase sigma factorchromosome CDS1547947 561 + 0.233512
CTC01439 putative transcriptional regulatory proteinchromosome CDS1553694 708 + 0.261299
CTC01452 transcriptional regulatory proteinchromosome CDS1568461 843 - 0.288256
CTC01482 transcriptional activator proteinchromosome CDS1605838 669 - 0.351271
CTC01490 transcriptional regulatory proteinchromosome CDS1617147 696 - 0.288793
CTC01499 ATP-dependent RNA helicasechromosome CDS1625990 1446 - 0.297372
CTC01523 transcriptional regulatory proteinchromosome CDS1649283 702 - 0.264957
CTC01528 conserved proteinchromosome CDS1654115 570 - 0.301754
CTC01560 phage-related proteinchromosome CDS1685300 765 - 0.249673
CTC01566 phage-related proteinchromosome CDS1694789 483 - 0.293996
CTC01572 arginine repressorchromosome CDS1700507 462 - 0.296537
CTC01581 N utilization substance protein Bchromosome CDS1709091 462 - 0.274892
CTC01606 fibronectin/fibrinogen-binding proteinchromosome CDS1726181 1734 + 0.256055
CTC01641 putative transcriptional regulatory proteinchromosome CDS1758620 1218 - 0.283251
CTC01695 hypothetical proteinchromosome CDS1804930 804 - 0.268657
CTC01759 glycerol uptake operon antiterminator regulatory proteinchromosome CDS1871307 573 - 0.291449
CTC01786 RNA polymerase sigma factorchromosome CDS1898736 564 - 0.260638
CTC01788 RNA polymerase sigma factorchromosome CDS1900875 639 - 0.262911
CTC01790 RNA polymerase sigma factorchromosome CDS1902955 528 - 0.253788
CTC01805 two-component response regulatorchromosome CDS1914787 723 - 0.275242
CTC01817 RNA polymerase sigma factorchromosome CDS1929460 582 - 0.242268
CTC01819 transcriptional regulatory proteinchromosome CDS1931708 480 - 0.26875
CTC01842 putative regulator of efflux transporterchromosome CDS1954847 828 - 0.2343
CTC01850 SWF/SNF family helicasechromosome CDS1963926 3282 - 0.260207
CTC01854 transcriptional regulatorchromosome CDS1970578 558 + 0.250896
CTC01856 ATP-dependent RNA helicasechromosome CDS1973130 1161 + 0.282515
CTC01890 IAA acetyltransferasechromosome CDS2010371 381 - 0.2021
CTC01906 transcriptional regulatory proteinchromosome CDS2027523 708 - 0.340395
CTC01910 DNA repair helicase rad25chromosome CDS2032848 2982 - 0.263246
CTC01919 regulatory component of sensory transduction systemchromosome CDS2047528 687 - 0.483261
CTC01979 transcriptional regulatory proteinchromosome CDS2105016 768 + 0.252604
CTC01999 ATP-dependent RNA helicasechromosome CDS2128461 1575 + 0.292064
CTC02016 conserved proteinchromosome CDS2147379 555 - 0.252252
CTC02150 transcriptional regulatorchromosome CDS2279470 411 + 0.238443
CTC02156 transcriptional regulatory proteinchromosome CDS2285554 786 - 0.293893
CTC02184 ATP-dependent RNA helicasechromosome CDS2310305 1113 + 0.290207
CTC02199 putative GTP pyrophosphokinasechromosome CDS2322360 2196 - 0.28643
CTC02220 transcriptional regulatory proteinchromosome CDS2338040 990 - 0.256566
CTC02221 transcriptional regulatory proteinchromosome CDS2339144 306 - 0.248366
CTC02246 RNA polymerase sigma-F factorchromosome CDS2366980 768 - 0.290365
CTC02299 conserved proteinchromosome CDS2423784 540 + 0.235185
CTC02346 catabolite control proteinchromosome CDS2487019 999 - 0.274274
CTC02366 hypothetical proteinchromosome CDS2505367 348 - 0.229885
CTC02406 hypothetical proteinchromosome CDS2546081 450 - 0.237778
CTC02471 putative transcription regulatorchromosome CDS2624638 594 - 0.277778
CTC02492 cytosolic protein containing cbs domainschromosome CDS2647056 1347 - 0.267261
CTC02531 transcriptional regulatorchromosome CDS2688513 1560 - 0.262179
CTC02569 transcriptional regulator, putative regular for glutamate degradationchromosome CDS2726198 975 - 0.277949
CTC02578 DNA-directed RNA polymerase alpha chainchromosome CDS2732872 948 - 0.303797
CTC02608 DNA-directed RNA polymerase beta chainchromosome CDS2753364 3453 - 0.338836
CTC02609 DNA-directed RNA polymerase beta chainchromosome CDS2756794 3711 - 0.330908
CTC02617 RNA polymerase sigma-H factorchromosome CDS2765774 663 - 0.313726
asnC regulatory protein asnCchromosome CDS588005 483 - 0.298137
codY codY proteinchromosome CDS1350208 777 + 0.306306
ctsR transcriptional regulator ctsRchromosome CDS2783742 459 - 0.265795
deoR transcriptional regulator, deoR familychromosome CDS1250241 648 + 0.25463
fliA RNA polymerase sigma factor for flagellar operon fliAchromosome CDS1771715 729 - 0.289438
gntR CTC00804 transcriptional regulator, gntR familychromosome CDS849091 366 - 0.259563
gntR transcriptional regulator, gntR familychromosome CDS1798435 366 - 0.265027
gntR transcriptional regulator, gntR familychromosome CDS2111145 381 + 0.275591
gntR transcriptional regulator, gntR familychromosome CDS2622441 666 - 0.276276
gntR CTC00820 transcriptional regulator, gntR familychromosome CDS868861 705 + 0.289362
gntR transcriptional regulator, gntR familychromosome CDS2012351 426 - 0.314554
greA transcription elongation factor greAchromosome CDS169858 561 + 0.299465
greA transcription elongation factor greAchromosome CDS2031229 465 - 0.286022
hrcA heat-inducible transcription repressor hrcAchromosome CDS2163380 1056 - 0.278409
iolR DNA-binding protein iolRchromosome CDS511884 780 - 0.238462
lacI transcriptional regulator of the lacI familychromosome CDS916580 1005 + 0.272637
lexA lexA repressorchromosome CDS1394722 603 + 0.300166
lytR membrane-bound protein lytRchromosome CDS2185493 1224 - 0.284314
marR transcriptional regulator, marR familychromosome CDS85948 456 + 0.265351
marR transcriptional regulator, marR familychromosome CDS2017897 465 - 0.258065
marR transcriptional regulator, marR familychromosome CDS2181209 477 - 0.303983
merR transcriptional regulator, merR familychromosome CDS1012044 855 + 0.305263
nusG transcription antitermination protein nusGchromosome CDS2763122 522 - 0.323755
padR putative transcriptional regulator, padR familychromosome CDS939815 435 + 0.289655
padR CTC00601 putative transcriptional regulator (padR family)chromosome CDS625498 321 - 0.274143
padR CTC00619 regulatory protein (padR family)chromosome CDS641505 372 + 0.268817
parB chromosome partitioning parB family proteinchromosome CDS2058779 657 - 0.307458
parB chromosome partitioning protein parBchromosome CDS60963 858 + 0.280886
phoP alkaline phosphatase synthesis transcriptional regulatory protein phoPchromosome CDS406476 687 + 0.267831
phoP alkaline phosphatase synthesis transcriptional regulatory protein phoPchromosome CDS2077470 528 - 0.280303
recG ATP-dependent DNA helicase recGchromosome CDS1319119 2052 + 0.274366
rpiR transcriptional regulator, rpiR familychromosome CDS1417647 912 - 0.322368
rpoD RNA polymerase sigma factor rpoDchromosome CDS921750 849 + 0.303887
rpoD RNA polymerase sigma factor rpoDchromosome CDS2138329 1101 - 0.333333
rpoN RNA polymerase sigma-54 factor rpoNchromosome CDS364944 1386 + 0.261905
sigV CTC00688 RNA polymerase sigma factor sigVchromosome CDS708021 534 - 0.235955
sinR putative transcriptional regulator sinRchromosome CDS1976494 516 + 0.27907
spaR CTC00628 subtilin biosynthesis regulatory protein spaRchromosome CDS646738 663 + 0.288084
tetR transcriptional regulator, tetR familychromosome CDS26462 567 - 0.268078
tipA transcriptional activator tipAchromosome CDS1248109 765 - 0.282353
virR response regulator, putative virRchromosome CDS1014662 705 - 0.224113