Gene list
Applied filters:
COG category: Transcription
Organism: Lactobacillus sakei subsp. sakei 23K, 23K
Number of genes found: 167
 | ||||||
| Hide UniProt / TrEMBL protein name | |
View in Fasta format (DNA) | |
View in Fasta format (Protein) | |
|
| ||||||
| Lactobacillus sakei subsp. sakei 23K, 23K | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Name | Locus tag | Product / Description | UniProt / TrEMBL protein name | Genomic element | Type | Begin | Length | Strand | GC-content |
| NA | LSA1612 | Hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1598503 | 267 | - | 0.41573 |
| NA | LSA1472 | Putative N-acetyl transferase, GNAT family | SubName: Full=Putative N-acetyl transferase, GNAT family; | chromosome | CDS | 1449323 | 432 | + | 0.428241 |
| NA | LSA0178 | Putative transcriptional regulator, MarR family | SubName: Full=Putative transcriptional regulator, MarR family; | chromosome | CDS | 171157 | 417 | + | 0.366906 |
| NA | LSA1607 | Putative transcriptional regulator, MarR family | SubName: Full=Putative transcriptional regulator, MarR family; | chromosome | CDS | 1594082 | 420 | - | 0.371429 |
| NA | LSA1650 | Hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1635110 | 591 | + | 0.411168 |
| NA | LSA1874 | Putative transcriptional regulator, MarR family | SubName: Full=Putative transcriptional regulator, MarR family; | chromosome | CDS | 1860439 | 483 | - | 0.459627 |
| NA | LSA0239 | Putative transcriptional regulator, MerR family | SubName: Full=Putative transcriptional regulator, MerR family; | chromosome | CDS | 234885 | 426 | + | 0.431925 |
| NA | LSA1324 | Putative DNA-binding protein, XRE family | SubName: Full=Putative DNA-binding protein, XRE family; | chromosome | CDS | 1294388 | 864 | - | 0.443287 |
| NA | LSA1503 | Hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1474756 | 555 | + | 0.378378 |
| NA | LSA0230 | Putative transcriptional regulator, MerR family (C-terminal fragment), authentic frameshift | SubName: Full=Putative transcriptional regulator, MerR family (C-terminal), authentic frameshift; | chromosome | CDS | 225886 | 246 | + | 0.410569 |
| NA | LSA0216_b | Putative transcriptional regulator, MarR family, truncated | SubName: Full=Putative transcriptional regulator, MarR family, truncated; | chromosome | CDS | 211637 | 270 | + | 0.433333 |
| NA | LSA0293 | Putative DNA-binding protein, XRE family | SubName: Full=Putative DNA-binding protein, XRE family; | chromosome | CDS | 292531 | 312 | - | 0.410256 |
| NA | LSA1724 | Putative transcriptional regulator, MarR family | SubName: Full=Putative transcriptional regulator, MarR family; | chromosome | CDS | 1707070 | 348 | - | 0.408046 |
| NA | LSA0123 | Putative sugar kinase, ROK family | SubName: Full=Putative sugar kinase, ROK family; | chromosome | CDS | 114450 | 888 | + | 0.418919 |
| NA | LSA0599 | Hypothetical prophage lsa1 protein | SubName: Full=Hypothetical prophage lsa1 protein; | chromosome | CDS | 603206 | 423 | + | 0.399527 |
| NA | LSA1434 | Putative transcriptional regulator, DUF24 family (related to MarR/PadR families) | SubName: Full=Putative transcriptional regulator, DUF24 family (Related to MarR/PadR families); | chromosome | CDS | 1405823 | 375 | + | 0.410667 |
| NA | LSA1853 | Transcriptional regulator, AsnC/Lrp family | SubName: Full=Transcriptional regulator, AsnC/Lrp family; | chromosome | CDS | 1841562 | 399 | + | 0.413534 |
| NA | LSA0265 | Putative transcriptional regulator, PadR family | SubName: Full=Putative transcriptional regulator, PadR family; | chromosome | CDS | 260348 | 534 | - | 0.423221 |
| NA | LSA0237 | Putative DNA-binding protein, XRE family | SubName: Full=Putative DNA-binding protein, XRE family; | chromosome | CDS | 233156 | 756 | + | 0.382275 |
| NA | LSA0541 | Putative DNA-binding protein, XRE family | SubName: Full=Putative DNA-binding protein, XRE family; | chromosome | CDS | 562708 | 855 | - | 0.40117 |
| NA | LSA0161 | Putative transcriptional regulator, ArsR family | SubName: Full=Putative transcriptional regulator, ArsR family; | chromosome | CDS | 155224 | 333 | - | 0.426426 |
| NA | LSA1201 | Putative transcriptional regulator, GntR family | SubName: Full=Putative transcriptional regulator, GntR family; | chromosome | CDS | 1182695 | 714 | + | 0.413165 |
| NA | LSA0369 | Putative N-acetyltransferase, GNAT family | SubName: Full=Putative N-acetyltransferase, GNAT family; | chromosome | CDS | 372606 | 525 | + | 0.417143 |
| NA | LSA0074 | Putative DNA-binding protein, XRE family | SubName: Full=Putative DNA-binding protein, XRE family; | chromosome | CDS | 70360 | 570 | - | 0.377193 |
| NA | LSA0537 | Putative transcriptional regulator, DUF24 family (MarR related) | SubName: Full=Putative transcriptional regulator, DUF24 family (MarR related); | chromosome | CDS | 560392 | 381 | + | 0.435696 |
| NA | LSA1789 | Putative transcriptional regulator with a sugar-binding domain, LacI family | SubName: Full=Putative transcriptional regulator with a sugar-binding domain, LacI family; | chromosome | CDS | 1773482 | 993 | - | 0.420947 |
| NA | LSA0935 | Putative DNA-binding protein, XRE family | SubName: Full=Putative DNA-binding protein, XRE family; | chromosome | CDS | 923111 | 207 | - | 0.400966 |
| NA | LSA1796 | Putative transcriptional regulator, AraC family | SubName: Full=Putative transcriptional regulator, AraC family; | chromosome | CDS | 1784181 | 864 | + | 0.355324 |
| NA | LSA0223 | Putative transcriptional regulator, LysR family (N-terminal fragment), degenerate | SubName: Full=Putative transcriptional regulator, LysR family (N-terminal), degenerate; | chromosome | CDS | 218880 | 456 | - | 0.440789 |
| NA | LSA1192 | Putative transcriptional regulator, MerR family | SubName: Full=Putative transcriptional regulator, MerR family; | chromosome | CDS | 1174712 | 420 | - | 0.440476 |
| NA | LSA0558 | Putative transcriptional regulator,LytR/AlgR family | SubName: Full=Putative transcriptional regulator,LytR/AlgR family; | chromosome | CDS | 574516 | 453 | + | 0.430464 |
| NA | LSA0197 | Putative transcriptional regulator, MarR family | SubName: Full=Putative transcriptional regulator, MarR family; | chromosome | CDS | 190786 | 543 | + | 0.360958 |
| NA | LSA0939 | Putative transcriptional regulator, MarR family | SubName: Full=Putative transcriptional regulator, MarR family; | chromosome | CDS | 925773 | 507 | + | 0.424063 |
| NA | LSA1349 | Putative N-Acetyltransferase, GNAT family | SubName: Full=Putative N-Acetyltransferase, GNAT family; | chromosome | CDS | 1318784 | 564 | - | 0.407801 |
| NA | LSA0103 | Putative transcriptional regulator, MarR family | SubName: Full=Putative transcriptional regulator, MarR family; | chromosome | CDS | 99295 | 483 | - | 0.401656 |
| NA | LSA0221 | Putative transcriptional regulator, LysR family (C-terminal fragment), degenerate | SubName: Full=Putative transcriptional regulator, LysR family (C-terminal), degenerate; | chromosome | CDS | 218448 | 333 | - | 0.417417 |
| NA | LSA1639 | Putative transcriptional regulator with a sugarisomerase domain, RpiR family | SubName: Full=Putative transcriptional regulator with a sugarisomerase domain, RpiR family; | chromosome | CDS | 1623677 | 831 | - | 0.43201 |
| NA | LSA1799 | Putative transcriptional regulator, GntR family | SubName: Full=Putative transcriptional regulator, GntR family; | chromosome | CDS | 1786492 | 720 | + | 0.441667 |
| NA | LSA0229 | Putative transcriptional regulator, MerR family (N-terminal fragment), authentic frameshift | SubName: Full=Putative transcriptional regulator, MerR family (N-terminal), authentic frameshift; | chromosome | CDS | 225731 | 150 | + | 0.413333 |
| NA | LSA0757 | Hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 753486 | 543 | + | 0.405157 |
| NA | LSA0513 | Putative stress-responsive transcriptional regulator | SubName: Full=Putative stress-responsive transcriptional regulator; | chromosome | CDS | 531605 | 237 | + | 0.42616 |
| NA | LSA1313 | Putative transcriptional regulator, LysR family | SubName: Full=Putative transcriptional regulator, LysR family; | chromosome | CDS | 1285831 | 828 | + | 0.432367 |
| NA | LSA0965 | Putative transcriptional regulator, TerR family | SubName: Full=Putative transcriptional regulator, TerR family; | chromosome | CDS | 953839 | 582 | + | 0.43299 |
| NA | LSA1054 | Transcription regulator, tetR family | SubName: Full=Transcription regulator, tetR family; | chromosome | CDS | 1048526 | 582 | + | 0.434708 |
| NA | LSA1369 | Two-component system, response regulator | SubName: Full=Two-component system, response regulator; | chromosome | CDS | 1337552 | 600 | - | 0.436667 |
| NA | LSA0426 | Putative transcriptional regulator, ArsR family | SubName: Full=Putative transcriptional regulator, ArsR family; | chromosome | CDS | 435366 | 333 | - | 0.426426 |
| NA | LSA1560 | Putative N-acetyltransferase, GNAT family | SubName: Full=Putative N-acetyltransferase, GNAT family; | chromosome | CDS | 1533229 | 462 | - | 0.417749 |
| NA | LSA0186 | Putative transcriptional regulator, LytR family | SubName: Full=Putative transcriptional regulator, LytR family; | chromosome | CDS | 178687 | 1014 | + | 0.40927 |
| NA | LSA0710 | Hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 713569 | 1038 | + | 0.418112 |
| NA | LSA0597 | Hypothetical prophage lsa1 protein | SubName: Full=Hypothetical prophage lsa1 protein; | chromosome | CDS | 602654 | 306 | + | 0.392157 |
| NA | LSA0990 | Hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 984071 | 435 | - | 0.43908 |
| NA | LSA0669 | Putative transcription regulator, TetR family | SubName: Full=Putative transcription regulator, TetR family; | chromosome | CDS | 671315 | 621 | + | 0.388084 |
| NA | LSA0151 | Hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 147688 | 519 | + | 0.402698 |
| NA | LSA0073 | Putative transcriptional regulator, RpiR family | SubName: Full=Putative transcriptional regulator, RpiR family; | chromosome | CDS | 69522 | 747 | + | 0.334672 |
| NA | LSA0219_a | Putative DNA-binding protein, XRE family | SubName: Full=Putative DNA-binding protein, XRE family; | chromosome | CDS | 213407 | 558 | + | 0.277778 |
| NA | LSA1025 | Segregation and condensation protein B | RecName: Full=Segregation and condensation protein B; | chromosome | CDS | 1014943 | 624 | - | 0.424679 |
| NA | LSA1521 | Putative transcriptional regulator, TetR family | SubName: Full=Putative transcriptional regulator, TetR family; | chromosome | CDS | 1495458 | 558 | - | 0.419355 |
| NA | LSA0600 | Hypothetical prophage lsa1 protein | SubName: Full=Hypothetical prophage lsa1 protein; | chromosome | CDS | 603696 | 342 | + | 0.394737 |
| NA | LSA0549 | Two-component system, response regulator | SubName: Full=Two-component system, response regulator; | chromosome | CDS | 568422 | 606 | + | 0.448845 |
| NA | LSA1868 | Putative transcriptional regulator, MerR family | SubName: Full=Putative transcriptional regulator, MerR family; | chromosome | CDS | 1853308 | 765 | - | 0.47451 |
| NA | LSA1107 | Hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1098481 | 159 | + | 0.440252 |
| NA | LSA0615 | Putative transcriptional regulator, ArgR family | RecName: Full=Arginine repressor; | chromosome | CDS | 617065 | 471 | + | 0.420382 |
| NA | LSA0147 | Putative DNA-repair helicase | SubName: Full=Putative DNA-repair helicase; | chromosome | CDS | 142108 | 1755 | + | 0.346439 |
| NA | LSA1351 | Putative transcritional regulator with aminotransferase domain, GntR family | SubName: Full=Putative transcritional regulator with aminotransferase domain, GntR family; | chromosome | CDS | 1320085 | 1428 | - | 0.471989 |
| NA | LSA1150 | Putative transcriptional regulator, TetR family | SubName: Full=Putative transcriptional regulator, TetR family; | chromosome | CDS | 1139675 | 642 | - | 0.394081 |
| NA | LSA0529 | Putative transcriptional regulator, MarR family | SubName: Full=Putative transcriptional regulator, MarR family; | chromosome | CDS | 548567 | 456 | + | 0.379386 |
| NA | LSA1566 | Putative transcription accessory protein, RNA-binding | SubName: Full=Putative transcription accessory protein, RNA-binding; | chromosome | CDS | 1536852 | 2178 | - | 0.432507 |
| NA | LSA1500 | Two-component system, response regulator | SubName: Full=Two-component system, response regulator; | chromosome | CDS | 1472666 | 732 | + | 0.355191 |
| NA | LSA0286 | Putative transcriptional regulator, lytR family | SubName: Full=Putative transcriptional regulator, lytR family; | chromosome | CDS | 282718 | 1188 | + | 0.409933 |
| NA | LSA1103 | Putative N-acetyltransferase, GNAT family | SubName: Full=Putative N-acetyltransferase, GNAT family; | chromosome | CDS | 1097022 | 429 | + | 0.400932 |
| NA | LSA0960 | Putative fibronectin/fibrinogene-binding protein | SubName: Full=Putative fibronectin/fibrinogene-binding protein; | chromosome | CDS | 948613 | 1716 | - | 0.421329 |
| NA | LSA0639 | Putative transcriptional regulator, PadR family | SubName: Full=Putative transcriptional regulator, PadR family; | chromosome | CDS | 641762 | 309 | + | 0.368932 |
| NA | LSA0217 | Putative thiosulfate sulfurtransferase with a ArsR-HTH domain, Rhodanese family | RecName: Full=Sulfurtransferase; | chromosome | CDS | 212040 | 657 | + | 0.438356 |
| NA | LSA0288 | Putative transcription regulator, GntR family | SubName: Full=Putative transcription regulator, GntR family; | chromosome | CDS | 285590 | 732 | + | 0.393443 |
| NA | LSA1865 | Hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1851437 | 540 | - | 0.453704 |
| NA | LSA1509 | Hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1477743 | 549 | + | 0.460838 |
| NA | LSA0475 | Putative N-acetyltransferase, GNAT family | SubName: Full=Putative N-acetyltransferase, GNAT family; | chromosome | CDS | 492343 | 438 | - | 0.390411 |
| NA | LSA1419 | Putative transcriptional regulator, GntR family | SubName: Full=Putative transcriptional regulator, GntR family; | chromosome | CDS | 1387693 | 387 | - | 0.413437 |
| NA | LSA0500 | Two-component system, response regulator (possibly involved in phosphate regulation) | SubName: Full=Two-component system, response regulator (Possibly involved in phosphate regulation); | chromosome | CDS | 519464 | 714 | + | 0.421569 |
| NA | LSA0385 | Putative ATP-dependent DNA/RNA helicase | SubName: Full=Putative ATP-dependent DNA/RNA helicase; | chromosome | CDS | 392226 | 1356 | + | 0.402655 |
| NA | LSA1643 | Putative sugar kinase, ROK family | SubName: Full=Putative sugar kinase, ROK family; | chromosome | CDS | 1628215 | 873 | + | 0.392898 |
| NA | LSA1341 | Putative N-acetyltransferase, GNAT family | SubName: Full=Putative N-acetyltransferase, GNAT family; | chromosome | CDS | 1312460 | 528 | - | 0.450758 |
| NA | LSA1454 | Two-component system, response regulator | SubName: Full=Two-component system, response regulator; | chromosome | CDS | 1427662 | 675 | + | 0.388148 |
| NA | LSA0240 | Putative N-acetyltransferase, GNAT family | SubName: Full=Putative N-acetyltransferase, GNAT family; | chromosome | CDS | 235365 | 519 | - | 0.402698 |
| NA | LSA1095 | Putative transcriptional activator, TENA/THI-4 family | SubName: Full=Putative transcriptional activator, TENA/THI-4 family; | chromosome | CDS | 1090808 | 684 | - | 0.428363 |
| NA | LSA0810 | Putative transcriptional regulator, MerR family | SubName: Full=Putative transcriptional regulator, MerR family; | chromosome | CDS | 803677 | 717 | + | 0.425384 |
| NA | LSA1038 | Hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1029159 | 555 | - | 0.362162 |
| NA | LSA1215 | Two component system, response regulator | SubName: Full=Two component system, response regulator; | chromosome | CDS | 1197788 | 741 | - | 0.422402 |
| NA | LSA1822 | Hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1814544 | 516 | - | 0.387597 |
| NA | LSA1797 | Putative transcriptional regulator, MerR family | SubName: Full=Putative transcriptional regulator, MerR family; | chromosome | CDS | 1785069 | 447 | - | 0.427293 |
| NA | LSA0589 | Putative prophage lsa1 DNA-binding protein, XRE family | SubName: Full=Putative prophage lsa1 DNA-binding protein, XRE family; | chromosome | CDS | 597576 | 780 | - | 0.328205 |
| NA | LSA1615 | Putative ATP-dependent RNA helicase | SubName: Full=Putative ATP-dependent RNA helicase; | chromosome | CDS | 1600484 | 1593 | - | 0.417451 |
| NA | LSA1692 | Putative transcriptional regulator, GntR family | SubName: Full=Putative transcriptional regulator, GntR family; | chromosome | CDS | 1673586 | 717 | - | 0.467225 |
| NA | LSA1513 | Putative transcriptional regulator (involved in exocellular polysaccharide biosynthesis) | SubName: Full=Putative transcriptional regulator (Involved in exocellular polysaccharide biosynthesis); | chromosome | CDS | 1487955 | 972 | - | 0.375514 |
| NA | LSA1677 | Putative DNA-directed RNA polymerase sigma factor, sigma H family | SubName: Full=Putative DNA-directed RNA polymerase sigma factor, sigma H family; | chromosome | CDS | 1658326 | 561 | - | 0.424242 |
| NA | LSA0154 | Putative DNA-binding protein, XRE family | SubName: Full=Putative DNA-binding protein, XRE family; | chromosome | CDS | 149540 | 207 | - | 0.454106 |
| NA | LSA1534 | Putative ATP-dependent RNA helicase | SubName: Full=Putative ATP-dependent RNA helicase; | chromosome | CDS | 1505389 | 1347 | - | 0.442465 |
| NA | LSA0383 | Hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 389902 | 1323 | + | 0.440665 |
| NA | LSA1407 | Putative transcriptional regulator, MarR family | SubName: Full=Putative transcriptional regulator, MarR family; | chromosome | CDS | 1374739 | 492 | - | 0.371951 |
| NA | LSA0130 | Putative transcriptional regulator, LacI family | SubName: Full=Putative transcriptional regulator, LacI family; | chromosome | CDS | 122755 | 1026 | + | 0.425926 |
| NA | LSA1630 | Putative sugar kinase, ROK family | SubName: Full=Putative sugar kinase, ROK family; | chromosome | CDS | 1615819 | 936 | + | 0.440171 |
| NA | LSA1403 | Hypothetical domain | RecName: Full=Transcriptional repressor NrdR; | chromosome | CDS | 1369477 | 474 | - | 0.413502 |
| NA | LSA0241 | Putative transcriptional regulator, MarR family | SubName: Full=Putative transcriptional regulator, MarR family; | chromosome | CDS | 235903 | 453 | - | 0.461369 |
| NA | LSA0047 | Hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 43574 | 246 | - | 0.430894 |
| NA | LSA1554 | Putative transcriptional regulator, LacI family | SubName: Full=Putative transcriptional regulator, LacI family; | chromosome | CDS | 1527018 | 939 | + | 0.467519 |
| NA | LSA1384 | Two-component system, response regulator | SubName: Full=Two-component system, response regulator; | chromosome | CDS | 1352199 | 687 | - | 0.419214 |
| NA | LSA0972 | Putative transcriptional regulator, LysR family | SubName: Full=Putative transcriptional regulator, LysR family; | chromosome | CDS | 961443 | 966 | - | 0.3706 |
| NA | LSA0912 | Putative ATP-dependent helicase, DinG family | SubName: Full=Putative ATP-dependent helicase, DinG family; | chromosome | CDS | 901422 | 2835 | + | 0.432451 |
| NA | LSA1653 | Putative transcriptional regulator, MarR family | SubName: Full=Putative transcriptional regulator, MarR family; | chromosome | CDS | 1637883 | 441 | - | 0.390023 |
| NA | LSA0077 | Two-component system, response regulator | SubName: Full=Two-component system, response regulator; | chromosome | CDS | 72438 | 714 | + | 0.389356 |
| NA | LSA0380 | Putative metal(Iron)-dependent transcriptional regulator, DtxR family | SubName: Full=Putative metal(Iron)-dependent transcriptional regulator, DtxR family; | chromosome | CDS | 386400 | 663 | + | 0.425339 |
| NA | LSA0590 | Hypothetical prophage lsa1 protein | SubName: Full=Hypothetical prophage lsa1 protein; | chromosome | CDS | 598496 | 192 | + | 0.401042 |
| NA | LSA1378 | Putative transcriptional regulator, DUF24 family (related to the MarR/PadR families) | SubName: Full=Putative transcriptional regulator, DUF24 family (Related to the MarR/PadR families); | chromosome | CDS | 1347218 | 357 | - | 0.417367 |
| NA | LSA0204 | Putative transcriptional regulator, PadR family | SubName: Full=Putative transcriptional regulator, PadR family; | chromosome | CDS | 196551 | 555 | + | 0.421622 |
| NA | LSA1007 | Putative transcriptional regulator, DUF24 family (related to MarR/PadR families) | SubName: Full=Putative transcriptional regulator, DUF24 family (Related to MarR/PadR families); | chromosome | CDS | 999306 | 366 | + | 0.379781 |
| NA | LSA1587 | Putative transcriptional regulator, GntR family | SubName: Full=Putative transcriptional regulator, GntR family; | chromosome | CDS | 1564019 | 702 | - | 0.448718 |
| NA | LSA0132 | Putative transcriptional regulator, MarR family | SubName: Full=Putative transcriptional regulator, MarR family; | chromosome | CDS | 124702 | 459 | + | 0.348584 |
| NA | LSA1250 | Hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1229043 | 303 | - | 0.382838 |
| NA | LSA0269 | Putative transcriptional regulator, TetR family | SubName: Full=Putative transcriptional regulator, TetR family; | chromosome | CDS | 262933 | 672 | - | 0.467262 |
| NA | LSA0681 | Putative transcriptional regulator, ArgR family | RecName: Full=Arginine repressor; | chromosome | CDS | 679250 | 453 | + | 0.390728 |
| NA | LSA1564 | Putative N-acetyltransferase, GNAT family | SubName: Full=Putative N-acetyltransferase, GNAT family; | chromosome | CDS | 1535857 | 462 | + | 0.426407 |
| NA | LSA0277 | Two-component system, response regulator | SubName: Full=Two-component system, response regulator; | chromosome | CDS | 272611 | 687 | + | 0.419214 |
| NA | LSA1717 | Putative DNA-binding protein, XRE family | SubName: Full=Putative DNA-binding protein, XRE family; | chromosome | CDS | 1700435 | 321 | - | 0.389408 |
| NA | LSA0421 | Putative transcriptional regulator, MerR family | SubName: Full=Putative transcriptional regulator, MerR family; | chromosome | CDS | 429388 | 441 | + | 0.412698 |
| NA | LSA1096 | Hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1092061 | 159 | - | 0.477987 |
| NA | LSA0579 | Putative transcriptional regulator, LysR family | SubName: Full=Putative transcriptional regulator, LysR family; | chromosome | CDS | 588084 | 873 | + | 0.442153 |
| NA | LSA0231 | Putative transcriptional regulator, MarR family | SubName: Full=Putative transcriptional regulator, MarR family; | chromosome | CDS | 226281 | 534 | + | 0.400749 |
| CcpA | LSA0415 | CcpA transcriptional regulator (Catabolic control protein A) | SubName: Full=CcpA transcriptional regulator (Catabolic control protein A); | chromosome | CDS | 422134 | 1002 | + | 0.41018 |
| araR | LSA1861 | Arabinose operon transcriptional regulator, GntR family | SubName: Full=Arabinose operon transcriptional regulator, GntR family; | chromosome | CDS | 1849132 | 1077 | - | 0.387187 |
| atkY | LSA1461 | Negative regulator of copper transport operon, AtkY | SubName: Full=Negative regulator of copper transport operon, AtkY; | chromosome | CDS | 1437334 | 441 | - | 0.412698 |
| cggR | LSA0603 | Glycolytic genes regulator | SubName: Full=Glycolytic genes regulator; | chromosome | CDS | 605626 | 1038 | + | 0.457611 |
| citR | LSA1221 | Citrate catabolism transcriptional regulator, GntR family | SubName: Full=Citrate catabolism transcriptional regulator, GntR family; | chromosome | CDS | 1202378 | 696 | - | 0.357759 |
| csp1 | LSA0768 | Similar to cold shock protein, CspA family | SubName: Full=Similar to cold shock protein, CspA family; | chromosome | CDS | 764283 | 201 | + | 0.38806 |
| csp2 | LSA1152_b | Similar to cold shock protein, CspA family | SubName: Full=Similar to cold shock protein, CspA family; | chromosome | CDS | 1142484 | 201 | - | 0.412935 |
| csp3 | LSA1561 | Similar to cold shock protein, CspA family | SubName: Full=Similar to cold shock protein, CspA family; | chromosome | CDS | 1533764 | 201 | - | 0.402985 |
| csp4 | LSA0946 | Similar to cold shock protein, CspA family | SubName: Full=Similar to cold shock protein, CspA family; | chromosome | CDS | 933054 | 207 | - | 0.42029 |
| ctsR | LSA1780 | Transcriptional regulator of stress response (CtsR) | SubName: Full=Transcriptional regulator of stress response (CtsR); | chromosome | CDS | 1757532 | 471 | - | 0.394904 |
| deoR | LSA0800 | Deoxyribonucleoside synthesis operon transcriptional regulator, GntR family | SubName: Full=Deoxyribonucleoside synthesis operon transcriptional regulator, GntR family; | chromosome | CDS | 792003 | 954 | + | 0.422432 |
| fruR | LSA1048 | Fructose operon transcription regulator, DeoR family | SubName: Full=Fructose operon transcription regulator, DeoR family; | chromosome | CDS | 1040145 | 753 | + | 0.407703 |
| galR | LSA0763 | Galactose operon transcriptional regulator, LacI family | SubName: Full=Galactose operon transcriptional regulator, LacI family; | chromosome | CDS | 758268 | 993 | - | 0.43001 |
| glk | LSA1329 | Glucokinase | SubName: Full=Glucokinase; EC=2.7.1.2; | chromosome | CDS | 1298719 | 972 | - | 0.425926 |
| glnR | LSA1322 | Glutamine synthetase transcriptional regulator, MerR family | SubName: Full=Glutamine synthetase transcriptional regulator, MerR family; | chromosome | CDS | 1293355 | 372 | - | 0.435484 |
| gntR | LSA0296 | Gluconate operon transcriptional regulator, RpiR family | SubName: Full=Gluconate operon transcriptional regulator, RpiR family; | chromosome | CDS | 294048 | 843 | - | 0.424674 |
| greA | LSA1372 | Transcription elongation factor GreA (Transcriptcleavage factor GreA) | RecName: Full=Transcription elongation factor GreA; AltName: Full=Transcript cleavage factor GreA; | chromosome | CDS | 1341026 | 474 | - | 0.394515 |
| hrcA | LSA1238 | Transcriptional regulator of heat-shock/chaperone genes | RecName: Full=Heat-inducible transcription repressor HrcA; | chromosome | CDS | 1217325 | 1059 | - | 0.413598 |
| lexA | LSA1275 | Transcriptional repressor LexA | RecName: Full=LexA repressor; EC=3.4.21.88; | chromosome | CDS | 1256429 | 615 | + | 0.450406 |
| mfd | LSA1604 | Transcription-repair coupling factor (TRCF) | RecName: Full=Transcription-repair-coupling factor; Short=TRCF; EC=3.6.4.-; | chromosome | CDS | 1588482 | 3522 | - | 0.444634 |
| mleR | LSA0440 | Transcriptional regulator of the malolactic fermentation, LysR family | SubName: Full=Transcriptional regulator of the malolactic fermentation, LysR family; | chromosome | CDS | 453963 | 921 | - | 0.393051 |
| nusA | LSA1251 | Transcription elongation protein NusA (Transcription termination-antitermination factor NusA) | SubName: Full=Transcription elongation protein NusA (Transcription termination-antitermination factor NusA); | chromosome | CDS | 1229357 | 1218 | - | 0.414614 |
| nusB | LSA0675 | Ribosomal RNA transcription antitermination protein NusB | RecName: Full=N utilization substance protein B homolog; Short=Protein NusB; | chromosome | CDS | 674411 | 429 | + | 0.386946 |
| nusG | LSA1674 | Transcription antitermination protein NusG | RecName: Full=Transcription termination/antitermination protein NusG; | chromosome | CDS | 1657216 | 549 | - | 0.393443 |
| parB1 | LSA0015 | Chromosome partitioning protein, DNA-binding exonuclease | SubName: Full=Chromosome partitioning protein, DNA-binding exonuclease; | chromosome | CDS | 17517 | 900 | + | 0.394444 |
| parB2 | LSA0017 | Chromosome partitioning protein, DNA-binding exonuclease | SubName: Full=Chromosome partitioning protein, DNA-binding exonuclease; | chromosome | CDS | 19185 | 876 | + | 0.432648 |
| rbsR | LSA0203 | Ribose operon transcriptional regulator, LacI family | SubName: Full=Ribose operon transcriptional regulator, LacI family; | chromosome | CDS | 195385 | 1023 | + | 0.432063 |
| recG | LSA0699 | ATP-dependent DNA helicase, RecG | SubName: Full=ATP-dependent DNA helicase, RecG; EC=3.6.1.-; | chromosome | CDS | 697657 | 2043 | + | 0.455702 |
| relA | LSA0737 | GTP pyrophosphokinase | SubName: Full=GTP pyrophosphokinase; EC=2.7.6.5; | chromosome | CDS | 732689 | 2232 | + | 0.423387 |
| rncS | LSA0707 | Ribonuclease (RNase III) | RecName: Full=Ribonuclease 3; EC=3.1.26.3; AltName: Full=Ribonuclease III; Short=RNase III; | chromosome | CDS | 707734 | 693 | + | 0.438672 |
| rnr | LSA1411 | Exoribonuclease R, RNase II family | RecName: Full=Ribonuclease R; Short=RNase R; EC=3.1.13.1; | chromosome | CDS | 1378741 | 2355 | - | 0.403822 |
| rpoA | LSA1739 | DNA-directed RNA polymerase, alpha subunit | RecName: Full=DNA-directed RNA polymerase subunit alpha; Short=RNAP subunit alpha; EC=2.7.7.6; AltName: Full=RNA polymerase subunit alpha; AltName: Full=Transcriptase subunit alpha; | chromosome | CDS | 1724000 | 939 | - | 0.380192 |
| rpoB | LSA1775 | DNA-directed RNA polymerase, beta subunit | RecName: Full=DNA-directed RNA polymerase subunit beta; Short=RNAP subunit beta; EC=2.7.7.6; AltName: Full=RNA polymerase subunit beta; AltName: Full=Transcriptase subunit beta; | chromosome | CDS | 1747662 | 3594 | - | 0.413745 |
| rpoC | LSA1774 | DNA-directed RNA polymerase, beta prime subunit | RecName: Full=DNA-directed RNA polymerase subunit beta; Short=RNAP subunit beta; EC=2.7.7.6; AltName: Full=RNA polymerase subunit beta; AltName: Full=Transcriptase subunit beta; | chromosome | CDS | 1743947 | 3645 | - | 0.417284 |
| rpoE | LSA1631 | DNA-directed RNA polymerase, delta subunit | RecName: Full=Probable DNA-directed RNA polymerase subunit delta; AltName: Full=RNAP delta factor; | chromosome | CDS | 1616829 | 609 | - | 0.390805 |
| rpoZ | LSA0686 | DNA-directed RNA polymerase, omega subunit | RecName: Full=DNA-directed RNA polymerase subunit omega; Short=RNAP omega subunit; EC=2.7.7.6; AltName: Full=RNA polymerase omega subunit; AltName: Full=Transcriptase subunit omega; | chromosome | CDS | 682873 | 258 | + | 0.360465 |
| scrK | LSA1790 | Fructokinase | SubName: Full=Fructokinase; EC=2.7.1.4; | chromosome | CDS | 1774665 | 903 | - | 0.393134 |
| scrR | LSA1794 | Sucrose operon transcriptional regulator, LacI family | SubName: Full=Sucrose operon transcriptional regulator, LacI family; | chromosome | CDS | 1780882 | 981 | + | 0.365953 |
| sigA | LSA0884 | DNA-directed RNA polymerase sigma factor, sigma A (Primary sigma factor) | RecName: Full=RNA polymerase sigma factor SigA; | chromosome | CDS | 871347 | 1110 | + | 0.414414 |
| sppR | LSA0563 | Two-component system, response regulator SppR (sakacin P production) | SubName: Full=Two-component system, response regulator SppR (Sakacin P production); | chromosome | CDS | 577446 | 747 | + | 0.374833 |
|
Beutenbergstraße 11 D-07745 Jena • Germany |
Phone: +49 3641 65-6000 Fax: +49 3641 65-6351 |
E-mail: info@leibniz-fli.de www.leibniz-fli.de |
Data Privacy Imprint |
|