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2024-05-05 22:40:13

Gene list

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COG category: Transcription
Organism: Staphylococcus aureus subsp. aureus USA300, USA300; FPR3757

Number of genes found: 175

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Staphylococcus aureus subsp. aureus USA300, USA300; FPR3757
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA SAUSA300_2271 phosphosugar-binding transcriptional regulatorchromosome CDS2441889 765 + 0.298039
NA SAUSA300_0662 acetyltransferase, GNAT familychromosome CDS737863 444 + 0.292793
NA SAUSA300_0195 RpiR family transcriptional regulatorchromosome CDS227384 876 + 0.343607
NA SAUSA300_2310 conserved hypothetical proteinchromosome CDS2483093 444 + 0.281532
NA SAUSA300_0804 putative transcriptional regulatorchromosome CDS885817 243 + 0.337449
NA SAUSA300_2157 NAD-dependent deacetylasechromosome CDS2334114 732 + 0.362022
NA SAUSA300_2547 conserved hypothetical proteinchromosome CDS2753010 564 + 0.349291
NA SAUSA300_0577 putative transcriptional regulatorchromosome CDS651567 417 - 0.333333
NA SAUSA300_2595 acetyltransferase, GNAT familychromosome CDS2822169 501 - 0.331337
NA SAUSA300_0350 transcriptional regulator, Cro/CI family-related proteinchromosome CDS401561 204 + 0.392157
NA SAUSA300_0643 acetyltransferase, GNAT familychromosome CDS717460 507 - 0.349112
NA SAUSA300_2050 TENA/THI-4 family proteinchromosome CDS2214625 690 - 0.328986
NA SAUSA300_2300 transcriptional regulator, TetR familychromosome CDS2472465 552 + 0.293478
NA SAUSA300_2316 acetyltransferase, GNAT familychromosome CDS2490597 516 - 0.319767
NA SAUSA300_1160 conserved hypothetical proteinchromosome CDS1275779 285 + 0.305263
NA SAUSA300_0958 transcriptional regulatorchromosome CDS1049324 1218 - 0.325123
NA SAUSA300_0645 DNA-binding response regulatorchromosome CDS719018 675 + 0.311111
NA SAUSA300_0401 exotoxinchromosome CDS453368 696 + 0.298851
NA SAUSA300_1101 putative fibronectin/fibrinogen binding proteinchromosome CDS1204825 1698 - 0.318021
NA SAUSA300_0090 conserved hypothetical proteinchromosome CDS98968 297 + 0.316498
NA SAUSA300_1455 transcriptional regulator, AraC familychromosome CDS1608675 894 + 0.334452
NA SAUSA300_0316 ROK family proteinchromosome CDS367811 861 + 0.376307
NA SAUSA300_0672 transcriptional regulator, MarR familychromosome CDS746323 444 - 0.331081
NA SAUSA300_1914 GntR family regulatory proteinchromosome CDS2079074 381 - 0.325459
NA SAUSA300_0137 transcriptional regulator, GntR familychromosome CDS156086 756 - 0.357143
NA SAUSA300_0644 conserved hypothetical proteinchromosome CDS718079 924 + 0.314935
NA SAUSA300_1651 CBS domain proteinchromosome CDS1815874 1299 - 0.335643
NA SAUSA300_2643 putative chromosome partioning protein, ParB familychromosome CDS2866908 840 - 0.353571
NA SAUSA300_0956 conserved hypothetical proteinchromosome CDS1048217 435 - 0.347126
NA SAUSA300_2445 transcriptional regulator, MerR familychromosome CDS2640156 765 - 0.341176
NA SAUSA300_0093 transcriptional regulator, LysR family domain proteinchromosome CDS101212 861 + 0.276423
NA SAUSA300_2559 DNA-binding response regulatorchromosome CDS2769967 666 - 0.298799
NA SAUSA300_0591 acetyltransferase, GNAT familychromosome CDS664615 477 + 0.316562
NA SAUSA300_0114 staphylococcal accessory regulatorchromosome CDS130114 753 - 0.273572
NA SAUSA300_2348 conserved hypothetical proteinchromosome CDS2525508 537 - 0.366853
NA SAUSA300_1434 phiSLT ORF104a-like protein, repressorchromosome CDS1588081 330 + 0.3
NA SAUSA300_2083 acetyltransferase, GNAT familychromosome CDS2245725 861 - 0.325203
NA SAUSA300_2431 putative helicasechromosome CDS2614823 2862 - 0.280573
NA SAUSA300_1220 DNA-binding response regulator, LuxR familychromosome CDS1338285 603 + 0.298507
NA SAUSA300_1210 conserved hypothetical proteinchromosome CDS1330746 291 + 0.264605
NA SAUSA300_1632 conserved hypothetical proteinchromosome CDS1787224 471 - 0.356688
NA SAUSA300_0998 conserved hypothetical proteinchromosome CDS1094005 540 + 0.298148
NA SAUSA300_2156 lactose phosphotransferase system repressorchromosome CDS2333108 756 - 0.339947
NA SAUSA300_2259 putative transcriptional regulatorchromosome CDS2428549 924 - 0.353896
NA SAUSA300_0658 transcriptional regulator, LysR familychromosome CDS734107 867 + 0.320646
NA SAUSA300_2326 transcription regulatory proteinchromosome CDS2501327 2106 + 0.285375
NA SAUSA300_2247 staphylococcal accessory regulatorchromosome CDS2411865 744 - 0.280914
NA SAUSA300_2318 acetyltransferase, GNAT familychromosome CDS2492353 402 - 0.378109
NA SAUSA300_2279 LysR family regulatory proteinchromosome CDS2451427 885 + 0.315254
NA SAUSA300_2490 regulatory protein, TetR familychromosome CDS2692635 549 + 0.306011
NA SAUSA300_1797 conserved hypothetical proteinchromosome CDS1980188 465 - 0.31828
NA SAUSA300_0126 conserved hypothetical proteinchromosome CDS144917 765 + 0.36732
NA SAUSA300_2515 transcriptional regulator, TetR familychromosome CDS2718361 558 + 0.317204
NA SAUSA300_0327 conserved hypothetical proteinchromosome CDS379288 945 + 0.378836
NA SAUSA300_2037 ATP-dependent RNA helicasechromosome CDS2201245 1521 - 0.364234
NA SAUSA300_0441 acetyltransferase, GNAT familychromosome CDS493671 486 + 0.36214
NA SAUSA300_2077 conserved hypothetical proteinchromosome CDS2239280 336 - 0.354167
NA SAUSA300_0317 conserved hypothetical proteinchromosome CDS368949 801 - 0.333333
NA SAUSA300_2322 transcriptional regulator, TetR familychromosome CDS2496132 624 + 0.309295
NA SAUSA300_2640 putative transcriptional regulatorchromosome CDS2864810 570 - 0.317544
NA SAUSA300_0777 cold shock proteinchromosome CDS867258 201 + 0.39801
NA SAUSA300_1968 putative phage transcriptional regulatorchromosome CDS2122839 450 - 0.248889
NA SAUSA300_0683 transcriptional regulator, DeoR familychromosome CDS757237 762 + 0.318898
NA SAUSA300_2160 transcriptional regulator, MerR familychromosome CDS2337268 417 - 0.297362
NA SAUSA300_2530 transcriptional regulator, TetR familychromosome CDS2731139 588 - 0.304422
NA SAUSA300_0033 methicillin-resistance MecR1 regulatory proteinchromosome CDS41233 987 + 0.292806
NA SAUSA300_1853 conserved hypothetical proteinchromosome CDS2016041 315 - 0.304762
NA SAUSA300_0373 conserved hypothetical proteinchromosome CDS424276 264 - 0.295455
NA SAUSA300_1722 conserved hypothetical proteinchromosome CDS1904566 549 + 0.275046
NA SAUSA300_1204 conserved hypothetical proteinchromosome CDS1327460 186 + 0.268817
NA SAUSA300_1312 acetyltransferase, GNAT familychromosome CDS1445512 510 - 0.337255
NA SAUSA300_0954 transcriptional regulator, MarR familychromosome CDS1043593 420 + 0.314286
NA SAUSA300_2331 transcriptional regulator, MarR familychromosome CDS2507172 447 + 0.284116
NA SAUSA300_0803 transcriptional regulator, Cro/CI familychromosome CDS885271 333 - 0.324324
NA SAUSA300_0020 DNA-binding response regulatorchromosome CDS24952 702 + 0.364672
NA SAUSA300_0878 transcriptional regulator, LysR familychromosome CDS965441 870 - 0.272414
NA SAUSA300_2336 transcriptional regulator, MerR familychromosome CDS2510801 741 + 0.279352
NA SAUSA300_0095 transcriptional regulator, LysR family domain proteinchromosome CDS103051 744 + 0.262097
NA SAUSA300_1433 putative phage regulatory proteinchromosome CDS1587729 201 - 0.383085
NA SAUSA300_0807 conserved hypothetical proteinchromosome CDS886681 384 + 0.307292
NA SAUSA300_2625 transcriptional regulator, PadR familychromosome CDS2851531 339 - 0.359882
NA SAUSA300_2021 S1 RNA binding domain proteinchromosome CDS2182412 2151 - 0.334728
NA SAUSA300_0943 acetyltransferase, GNAT family familychromosome CDS1031379 498 + 0.309237
NA SAUSA300_1295 cold shock protein, CSD familychromosome CDS1425893 201 - 0.378109
NA SAUSA300_1346 putative DnaQ family exonuclease/DinG family helicasechromosome CDS1511302 2694 - 0.301039
NA SAUSA300_2337 transcriptional regulator, DegU familychromosome CDS2511799 654 - 0.33945
NA SAUSA300_1070 acetyltransferase, GNAT familychromosome CDS1169651 441 - 0.324263
NA SAUSA300_0110 transcriptional regulator, GntR family/aminotransferase, class Ichromosome CDS123924 1398 + 0.290415
NA SAUSA300_0503 transcriptional regulator, gntR family proteinchromosome CDS562046 1383 - 0.294288
NA SAUSA300_2248 transcriptional regulator, AraC familychromosome CDS2412634 1956 - 0.278119
NA SAUSA300_0755 glycolytic operon regulatorchromosome CDS842281 1014 + 0.373767
NA SAUSA300_0334 transcriptional regulator, MarR familychromosome CDS386927 420 + 0.335714
NA SAUSA300_2218 staphylococcal accessory regulatorchromosome CDS2388217 351 - 0.290598
NA SAUSA300_0785 acetyltransferase, GNAT familychromosome CDS872268 495 - 0.29495
NA SAUSA300_2261 conserved hypothetical proteinchromosome CDS2430811 693 + 0.308802
NA SAUSA300_0258 transcriptional regulator, GntR familychromosome CDS309956 705 - 0.334752
NA SAUSA300_1408 phage helicasechromosome CDS1573108 1272 - 0.326258
NA SAUSA300_2639 cold shock proteinchromosome CDS2864456 228 + 0.390351
NA SAUSA300_0265 putative ribose operon repressorchromosome CDS316972 999 - 0.373373
NA SAUSA300_2509 transcriptional regulator, TetR familychromosome CDS2714829 570 + 0.326316
NA SAUSA300_1518 ATP-dependent RNA helicase, DEAD/DEAH box familychromosome CDS1667925 1347 - 0.326652
NA SAUSA300_2216 transcriptional regulator, MarR familychromosome CDS2386471 441 + 0.321995
NA SAUSA300_2459 transcriptional regulator, MarR familychromosome CDS2656437 435 - 0.351724
NA SAUSA300_2563 putative transcriptional regulatorchromosome CDS2772763 456 - 0.320175
NA SAUSA300_2480 transcriptional regulator, LysR familychromosome CDS2677719 888 - 0.332207
NA SAUSA300_1170 transcriptional regulator, GntR familychromosome CDS1288696 714 + 0.313726
NA SAUSA300_0255 sensory transduction protein LytRchromosome CDS307858 741 + 0.322537
NA SAUSA300_0042 conserved hypothetical proteinchromosome CDS53118 1491 + 0.285044
NA SAUSA300_0519 conserved hypothetical proteinchromosome CDS580244 570 + 0.277193
NA SAUSA300_1980 acetyltransferase, GNAT familychromosome CDS2137030 444 - 0.268018
NA SAUSA300_2308 response regulator proteinchromosome CDS2480890 675 + 0.354074
NA SAUSA300_2264 phosphosugar-binding transcriptional regulator, RpiR familychromosome CDS2433701 882 + 0.292517
NA SAUSA300_1583 conserved hypothetical proteinchromosome CDS1732929 423 - 0.347518
NA SAUSA300_1798 DNA-binding response regulatorchromosome CDS1981008 624 - 0.315705
NA SAUSA300_0361 ParB-like partition proteinchromosome CDS415027 846 + 0.339244
NA SAUSA300_0621 iron-dependent repressorchromosome CDS694132 645 + 0.303876
NA SAUSA300_2452 transcriptional regulator, MarR familychromosome CDS2648552 465 - 0.245161
NA SAUSA300_1590 GTP pyrophosphokinasechromosome CDS1740946 2211 - 0.345545
NA SAUSA300_1969 phi77 ORF011-like protein, phage transcriptional repressorchromosome CDS2123236 714 + 0.336134
NA SAUSA300_2505 acetyltransferase, GNAT familychromosome CDS2711291 489 - 0.253579
agrA SAUSA300_1992 accessory gene regulator protein Achromosome CDS2149074 627 + 0.318979
agrB SAUSA300_1989 accessory gene regulator protein Bchromosome CDS2146942 570 + 0.27193
argR SAUSA300_0066 arginine repressorchromosome CDS74617 447 - 0.250559
argR SAUSA300_2571 arginine repressorchromosome CDS2783296 450 - 0.3
argR SAUSA300_1469 arginine repressorchromosome CDS1624622 453 - 0.298013
arlR SAUSA300_1308 DNA-binding response regulatorchromosome CDS1441610 660 - 0.331818
arsR SAUSA300_2098 transcriptional repressor, ArsR familychromosome CDS2262084 321 + 0.345794
arsR SAUSA300_1717 arsenical resistance operon repressorchromosome CDS1900744 348 + 0.313218
ccpA SAUSA300_1682 catabolite control protein Achromosome CDS1853104 990 - 0.331313
codY SAUSA300_1148 GTP-sensing transcriptional pleiotropic repressor CodYchromosome CDS1259651 774 + 0.319121
comK SAUSA300_0928 competence transcription factorchromosome CDS1019067 531 - 0.301318
ctsR SAUSA300_0507 transcriptional regulator CtsRchromosome CDS566563 462 + 0.311688
glcT SAUSA300_1253 transcription antiterminatorchromosome CDS1378770 861 + 0.277584
glk SAUSA300_1507 glucokinasechromosome CDS1658088 987 - 0.346505
glnR SAUSA300_1200 glutamine synthetase repressorchromosome CDS1322391 369 + 0.325203
glpP SAUSA300_1190 glycerol uptake operon antiterminator regulatory proteinchromosome CDS1311297 543 + 0.290976
gltC SAUSA300_0444 LysR family regulatory proteinchromosome CDS496337 885 - 0.329944
gntR SAUSA300_2444 gluconate operon transcriptional repressorchromosome CDS2639322 681 - 0.35536
greA SAUSA300_1567 transcription elongation factor GreAchromosome CDS1716722 477 - 0.333333
hrcA SAUSA300_1542 heat-inducible transcription repressor HrcAchromosome CDS1691970 978 - 0.286299
kdpE SAUSA300_2036 DNA-binding response regulator, KdpEchromosome CDS2200181 696 + 0.326149
lexA SAUSA300_1237 LexA repressorchromosome CDS1355029 624 - 0.362179
malR SAUSA300_1457 maltose operon transcriptional repressorchromosome CDS1611316 1020 - 0.313726
mfd SAUSA300_0481 transcription-repair coupling factorchromosome CDS537797 3507 + 0.342458
msrR SAUSA300_1257 peptide methionine sulfoxide reductase regulator MsrRchromosome CDS1384825 984 + 0.332317
nusA SAUSA300_1159 transcription termination factor NusAchromosome CDS1274583 1176 + 0.354592
nusB SAUSA300_1473 transcription antitermination factor NusBchromosome CDS1627942 390 - 0.302564
nusG SAUSA300_0521 transcription termination/antitermination factor NusGchromosome CDS581322 549 + 0.355191
phoP SAUSA300_1639 alkaline phosphatase synthesis transcriptional regulatory protein PhoPchromosome CDS1797197 705 - 0.339007
recG SAUSA300_1120 ATP-dependent DNA helicase RecGchromosome CDS1225776 2061 + 0.335759
rho SAUSA300_2075 transcription termination factor Rhochromosome CDS2236052 1317 - 0.357631
rnc SAUSA300_1126 ribonuclease IIIchromosome CDS1231840 732 + 0.34153
rnr SAUSA300_0764 ribonuclease Rchromosome CDS851511 2373 + 0.348083
rot SAUSA300_1708 staphylococcal accessory regulator Rotchromosome CDS1890756 501 - 0.313373
rpoA SAUSA300_2178 DNA-directed RNA polymerase alpha subunitchromosome CDS2357823 945 - 0.337566
rpoB SAUSA300_0527 DNA-directed RNA polymerase, beta subunitchromosome CDS585695 3411 + 0.376722
rpoC SAUSA300_0528 DNA-directed RNA polymerase, beta' subunitchromosome CDS589269 3597 + 0.362524
rpoD SAUSA300_1521 RNA polymerase sigma factor RpoDchromosome CDS1671296 1107 - 0.336947
rpoE SAUSA300_2082 DNA-directed RNA polymerase, delta subunitchromosome CDS2245083 531 - 0.3258
rpoF SAUSA300_2022 RNA polymerase sigma-37 factorchromosome CDS2184996 771 - 0.350195
rpoZ SAUSA300_1103 DNA-directed RNA polymerase, omega subunitchromosome CDS1207420 219 + 0.324201
rsbU SAUSA300_2025 sigma-B regulation proteinchromosome CDS2186667 1002 - 0.313373
saeR SAUSA300_0691 DNA-binding response regulator SaeRchromosome CDS767241 687 - 0.327511
sarA SAUSA300_0605 staphylococcal accessory regulator Achromosome CDS678506 375 - 0.274667
sarT SAUSA300_2437 staphylococcal accessory regulator Tchromosome CDS2626556 357 - 0.226891
sarU SAUSA300_2438 staphylococcal accessory regulator Uchromosome CDS2627241 744 + 0.248656
sarX SAUSA300_0654 staphylococcal accessory protein Xchromosome CDS731190 426 + 0.246479
scpB SAUSA300_1444 segregation and condensation protein Bchromosome CDS1598494 543 - 0.313076
scrR SAUSA300_1995 sucrose operon repressorchromosome CDS2152656 951 - 0.324921
srrA SAUSA300_1442 staphylococcal respiratory response protein, SrrAchromosome CDS1596906 726 - 0.344353
tcaR SAUSA300_2303 transcriptional regulator TcaRchromosome CDS2476345 456 - 0.287281
tetR SAUSA300_2599 intercellular adhesion operon transcription regulator, TetR familychromosome CDS2825887 561 - 0.27451
treR SAUSA300_0450 trehalose operon repressorchromosome CDS507370 729 + 0.334705
ureG SAUSA300_2243 urease accessory protein UreGchromosome CDS2409061 615 + 0.347967
vraR SAUSA300_1865 DNA-binding response regulatorchromosome CDS2025587 630 - 0.338095